Prupe.4G153600_v2.0.a1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
8797119 .. 8799452
2334 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G153600.1

Sequence Viewer

Length: 1065 bp
ATGGGAAAGACTTTGGTTCTAGCATTCTACATAACCATATGCTGTATTGCTTTTGTGATATCAAAGATTGTTATTTCAGTCCTCATCTATAGGCGATGGAAGAGAAAGAAGTTGGTTTTTGAAGATGGCGTCTCTGGTGGGAAAATGGTTTTGTTTAGGGCTTCTGCAATGCAATCTCTCAAATCAGATACATTCTTAAAGAAGACACTCAAGTTGAGCAACAAGGACATCATTGGCTCTGGAGGCTATGGGACAGTTTATAAACTGACAGTAAATGAGTCCATAGCCTTTGCTGTGAAAAGATTGAACAGAGGAAGTGCAGATAGAGACCGAGGCTTCGAGAGAGAGTTAGAAGCGATGGGGGACATAAAGCACCGCAACATTGTGACCCTTCATGGATATTACACTGCTCCAAACTACAATCTTCTTATATATGACTTGATGCCTAATGGAAGTTTGGATGCAGTCCTACAAGGAAGATCAATGGAGAAGAAGCTTTTGGATTGGCCTTCCAGATACAAAATAGCACTAGGTACTGCAAGAGGAATATCATACCTTCATCATGATTGCATCCCTCACATAATCCATAGAGATATTAAATCAAGCAACATATTGTTGGATCAAAACATGGAGGCCAGAGTTTCTGACTTTGGGCTGGCCACTTTGATGGAACCAGATAAGACTCATGTTTCAACACTTGTAGCTGGAACTTTTGGATACTTAGCTCCTGAATATTTCGATACAGGAAGAGCAACAGCAAAAGGGGATGTTTACAGTTTTGGAGTGGTTTTATTAGAACTTCTAACTGGAAAGAAACCTACAGATGAAGCATTTATTGAGGAGGGTACAAAGCTTGTGACATGGGTGAAGGCAGTTATTCAGGACAAAAAGGAGGAGTATGTGATTGACAGTAACTTAGGGTGTTGTCCAACCGATGAGATTAACAATGCCTTTAGTATTGCTTTAATGTGCCTTGAACCAGAGCCTTCCAAGAGGCCTACCATGGTTGAGGTTGTCAAGATGCTTGAGGAGATAAAAAATAACAAAGTTGTAAAAGAGACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

355

Amino Acids

39.68

Weight (kDa)

8.8

Isoelectric Point (pI)

32.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013875)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78530 AT1G78530
fragaria_vesca FvH4_3g17360
malus_domestica MD11G1273500.v1.1
prunus_persica Prupe.4G153600_v2.0.a1
pyrus_communis pycom11g24120
rosa_chinensis RchiOBHm_Chr5g0028881
rosa_laevigata RLG00000033122
rosa_multiflora Rmu_co8260251.1_g000001 Rmu_sc0000638.1_g000038
rosa_roxburghii Rroxscaffold_1G00051000
rosa_rugosa Rorug05G0111200
rosa_samantha Rh5AG203500 Rh5BG201600 Rh5CG222600 Rh5DG205200
rosa_wichuraiana Rw5G018410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 261
AciI CCGC 1 cut(s) 376
AclWI GGATC 1 cut(s) 627
AcoI YGGCCR 1 cut(s) 657
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 2 cut(s) 535, 847
AgsI TTSAA 4 cut(s) 122, 307, 693, 977
AjuI GAANNNNNNNTTGG 2 cut(s) 482, 514
AluBI AGCT 4 cut(s) 496, 704, 725, 853
AluI AGCT 4 cut(s) 496, 704, 725, 853
Alw26I GTCTC 3 cut(s) 136, 321, 1052
AlwI GGATC 1 cut(s) 627
AoxI GGCC 4 cut(s) 506, 633, 657, 995
ArsI GACNNNNNNTTYG 2 cut(s) 320, 352
AsuHPI GGTGA 1 cut(s) 877
BalI TGGCCA 1 cut(s) 659
BbsI GAAGAC 1 cut(s) 209
BccI CCATC 4 cut(s) 90, 119, 352, 661
BciVI GTATCC 1 cut(s) 710
BcoDI GTCTC 3 cut(s) 136, 321, 1052
BfaI CTAG 2 cut(s) 20, 530
BfmI CTRYAG 2 cut(s) 88, 819
BfuI GTATCC 1 cut(s) 710
BmiI GGNNCC 1 cut(s) 672
BmsI GCATC 4 cut(s) 432, 451, 579, 1011
BpiI GAAGAC 1 cut(s) 209
BpmI CTGGAG 1 cut(s) 261
BpuEI CTTGAG 2 cut(s) 194, 1046
BsaHI GRCGYC 1 cut(s) 129
BsaI GGTCTC 1 cut(s) 321
BsaJI CCNNGG 2 cut(s) 331, 1002
Bse1I ACTGG 1 cut(s) 811
Bse3DI GCAATG 1 cut(s) 174
BseDI CCNNGG 2 cut(s) 331, 1002
BseGI GGATG 3 cut(s) 466, 570, 772
BseMI GCAATG 1 cut(s) 174
BseNI ACTGG 1 cut(s) 811
BseRI GAGGAG 3 cut(s) 854, 908, 1043
BsgI GTGCAG 1 cut(s) 339
BshFI GGCC 4 cut(s) 508, 635, 659, 997
BslFI GGGAC 2 cut(s) 265, 377
BsmAI GTCTC 3 cut(s) 136, 321, 1052
BsmBI CGTCTC 1 cut(s) 136
BsmFI GGGAC 2 cut(s) 265, 377
BsmI GAATGC 1 cut(s) 23
BsnI GGCC 4 cut(s) 508, 635, 659, 997
Bso31I GGTCTC 1 cut(s) 321
Bsp143I GATC 2 cut(s) 479, 619
Bsp19I CCATGG 1 cut(s) 1002
BspACI CCGC 1 cut(s) 376
BspANI GGCC 4 cut(s) 508, 635, 659, 997
BspHI TCATGA 1 cut(s) 562
BspLI GGNNCC 1 cut(s) 672
BspPI GGATC 1 cut(s) 627
BspQI GCTCTTC 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 321
BsrDI GCAATG 1 cut(s) 174
BsrI ACTGG 1 cut(s) 811
BssECI CCNNGG 2 cut(s) 331, 1002
BssMI GATC 2 cut(s) 479, 619
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 1 cut(s) 1002
Bst4CI ACNGT 4 cut(s) 256, 271, 776, 911
Bst6I CTCTTC 2 cut(s) 95, 742
BstACI GRCGYC 1 cut(s) 129
BstC8I GCNNGC 1 cut(s) 657
BstDEI CTNAG 2 cut(s) 721, 916
BstDSI CCRYGG 1 cut(s) 1002
BstF5I GGATG 3 cut(s) 466, 570, 772
BstKTI GATC 2 cut(s) 482, 622
BstMAI GTCTC 3 cut(s) 136, 321, 1052
BstMBI GATC 2 cut(s) 479, 619
BstMWI GCNNNNNNNGC 1 cut(s) 243
BstSFI CTRYAG 2 cut(s) 88, 819
BstV2I GAAGAC 1 cut(s) 209
BstXI CCANNNNNNTGG 1 cut(s) 667
BsuI GTATCC 1 cut(s) 710
BsuRI GGCC 4 cut(s) 508, 635, 659, 997
BtgI CCRYGG 1 cut(s) 1002
BtgZI GCGATG 2 cut(s) 109, 371
BtsCI GGATG 3 cut(s) 466, 570, 772
BtsI GCAGTG 1 cut(s) 405
BtsIMutI CAGTG 1 cut(s) 405
Cac8I GCNNGC 1 cut(s) 657
CciI TCATGA 1 cut(s) 562
CseI GACGC 1 cut(s) 118
Csp6I GTAC 2 cut(s) 534, 846
CviAII CATG 6 cut(s) 395, 563, 628, 686, 861, 1003
CviQI GTAC 2 cut(s) 534, 846
DdeI CTNAG 2 cut(s) 721, 916
DpnI GATC 2 cut(s) 481, 621
DpnII GATC 2 cut(s) 479, 619
EaeI YGGCCR 1 cut(s) 657
Eam1104I CTCTTC 2 cut(s) 95, 742
EarI CTCTTC 2 cut(s) 95, 742
Eco130I CCWWGG 1 cut(s) 1002
Eco147I AGGCCT 1 cut(s) 997
Eco31I GGTCTC 1 cut(s) 321
Eco32I GATATC 1 cut(s) 60
EcoRV GATATC 1 cut(s) 60
EcoT14I CCWWGG 1 cut(s) 1002
ErhI CCWWGG 1 cut(s) 1002
Esp3I CGTCTC 1 cut(s) 136
FaeI CATG 6 cut(s) 398, 566, 631, 689, 864, 1006
FaqI GGGAC 2 cut(s) 265, 377
FatI CATG 6 cut(s) 394, 562, 627, 685, 860, 1002
FauNDI CATATG 1 cut(s) 38
FokI GGATG 3 cut(s) 473, 557, 779
FspBI CTAG 2 cut(s) 20, 530
GsuI CTGGAG 1 cut(s) 261
HaeIII GGCC 4 cut(s) 508, 635, 659, 997
HgaI GACGC 1 cut(s) 118
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 6 cut(s) 398, 566, 631, 689, 864, 1006
HindIII AAGCTT 2 cut(s) 494, 851
HinfI GANTC 2 cut(s) 278, 682
HphI GGTGA 1 cut(s) 877
Hpy166II GTNNAC 1 cut(s) 772
Hpy188I TCNGA 2 cut(s) 187, 646
Hpy188III TCNNGA 7 cut(s) 240, 340, 513, 563, 728, 881, 1018
Hpy8I GTNNAC 1 cut(s) 772
HpyAV CCTTC 5 cut(s) 401, 519, 566, 862, 996
HpyCH4III ACNGT 4 cut(s) 256, 271, 776, 911
HpyCH4V TGCA 6 cut(s) 167, 172, 320, 464, 539, 570
HpyF10VI GCNNNNNNNGC 1 cut(s) 243
HpyF3I CTNAG 2 cut(s) 721, 916
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 6 cut(s) 398, 566, 631, 689, 864, 1006
Kzo9I GATC 2 cut(s) 479, 619
LguI GCTCTTC 1 cut(s) 742
LmnI GCTCC 2 cut(s) 415, 730
LweI GCATC 4 cut(s) 432, 451, 579, 1011
MaeI CTAG 2 cut(s) 20, 530
MaeIII GTNAC 3 cut(s) 385, 856, 911
MalI GATC 2 cut(s) 481, 621
MboI GATC 2 cut(s) 479, 619
MboII GAAGA 7 cut(s) 112, 134, 214, 416, 489, 502, 759
MlsI TGGCCA 1 cut(s) 659
MluNI TGGCCA 1 cut(s) 659
MlyI GAGTC 2 cut(s) 287, 676
MmeI TCCRAC 2 cut(s) 597, 953
Mox20I TGGCCA 1 cut(s) 659
MscI TGGCCA 1 cut(s) 659
MseI TTAA 5 cut(s) 197, 597, 942, 965, 1063
MslI CAYNNNNRTG 1 cut(s) 665
Msp20I TGGCCA 1 cut(s) 659
Mva1269I GAATGC 1 cut(s) 23
MwoI GCNNNNNNNGC 1 cut(s) 243
NcoI CCATGG 1 cut(s) 1002
NdeI CATATG 1 cut(s) 38
NdeII GATC 2 cut(s) 479, 619
NlaIII CATG 6 cut(s) 398, 566, 631, 689, 864, 1006
NlaIV GGNNCC 1 cut(s) 672
NmuCI GTSAC 2 cut(s) 385, 856
PagI TCATGA 1 cut(s) 562
PceI AGGCCT 1 cut(s) 997
PciSI GCTCTTC 1 cut(s) 742
PctI GAATGC 1 cut(s) 23
PleI GAGTC 2 cut(s) 286, 676
PpsI GAGTC 2 cut(s) 286, 676
PsiI TTATAA 1 cut(s) 261
PspN4I GGNNCC 1 cut(s) 672
RsaI GTAC 2 cut(s) 535, 847
RsaNI GTAC 2 cut(s) 534, 846
RseI CAYNNNNRTG 1 cut(s) 665
SapI GCTCTTC 1 cut(s) 742
SaqAI TTAA 5 cut(s) 197, 597, 942, 965, 1063
Sau3AI GATC 2 cut(s) 479, 619
SchI GAGTC 2 cut(s) 287, 676
SetI ASST 8 cut(s) 498, 535, 558, 706, 727, 820, 855, 1014
SfaNI GCATC 4 cut(s) 432, 451, 579, 1011
SfcI CTRYAG 2 cut(s) 88, 819
SmiMI CAYNNNNRTG 1 cut(s) 665
SmlI CTYRAG 2 cut(s) 209, 1025
SmoI CTYRAG 2 cut(s) 209, 1025
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 1 cut(s) 376
SspI AATATT 1 cut(s) 734
SspMI CTAG 2 cut(s) 20, 530
StuI AGGCCT 1 cut(s) 997
StyI CCWWGG 1 cut(s) 1002
TaaI ACNGT 4 cut(s) 256, 271, 776, 911
TaqI TCGA 2 cut(s) 339, 738
TaqII GACCGA 1 cut(s) 345
Tru1I TTAA 5 cut(s) 197, 597, 942, 965, 1063
Tru9I TTAA 5 cut(s) 197, 597, 942, 965, 1063
TscAI CASTG 1 cut(s) 412
TseFI GTSAC 2 cut(s) 385, 856
Tsp45I GTSAC 2 cut(s) 385, 856
TspDTI ATGAA 3 cut(s) 383, 548, 840
TspRI CASTG 1 cut(s) 412
XspI CTAG 2 cut(s) 20, 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.