Prupe.4G158400_v2.0.a1

BES1 BZR1 homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0009842
Physical Location & Seq
Reverse (-)
9091472 .. 9095329
3858 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G158400.1

Sequence Viewer

Length: 975 bp
ATGACGTACGGGACTCGTATGCCGACGTGGAAGGAGAGAGAGAACAACAAGAGAAGAGAAAGAAGGCGAAGAGCTATAGCGGCGAAGATCTTCGCCGGTCTGAGAATGTACGGGAACTACAAGCTCCCCAAGCACTGCGACAATAATGAGGTCCTCAAAGCTCTCTGCGACGAGGCCGGTTGGACCGTTGAACCGGACGGCACCACTTACCGCAAGGGATGCAAGCCTGCTGAACGCATGGACGTGGTGGGTGGATCGACACTAGCTAGCCCATGCTCGTCTTACCACCCAAGTACTTGTGCTTCCTACAATCCAAGCCCAGGCTCTTCTTCCTTCCCAAGCCCGGCATCATCTTCCTATGCTGCTAATCAGAATGCCGATGGCAGGTCCCTTATCCCATGGCTCAAAAACCTCTCATCTGGATCCTCTTCAGCCTCCTCTTCTAAACTACCGAATCTCTACATCCATGGTGGCTCTATCAGTGCTCCTGTTACCCCTCCATTAAGCTCCCCAACTGCCAGAACACCCCGAATGAAAACTGACTGGGATGACCAGTCTGCTCGCCCAGGGTGGGGCGGGCAGCAATACTCCTTCCTGCCATCTTCTACTCCTCCAAGCCCTGGACGGCAGATTGTTCCTGATCCAGAATGGTTTGCTGGGCTTCGGATCCCCCATGGACCAACTTCCCCAACATTTAGCCTTGTTGCTTTGAACCCATTTGGGTTTAAGGATGAGGCTTTAGCTGGTGGTGGATCTCGCATGTGGACTCCGGGGCAAAGCGGGACATGCTCTCCTGCCATTGCAGCCGGCTCTGATCACACTGCAGACATTCCAATGTCAGAGGTGATTTCTGATGAGTTTGCATTTGGATGCAACACAGCAGGGCTGGTTAAGCCATGGGAAGGAGAGAGGATTCACGAAGAGTGTGGATCAGATGATCTGGAGCTCACTCTTGGGAGCTCAAGAACCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BES1_N

Protein Analysis

325

Amino Acids

34.81

Weight (kDa)

8.38

Isoelectric Point (pI)

56.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 375
AccB1I GGYRCC 1 cut(s) 200
AccB7I CCANNNNNTGG 1 cut(s) 620
AciI CCGC 4 cut(s) 80, 211, 576, 780
AclWI GGATC 8 cut(s) 262, 417, 430, 635, 661, 674, 760, 937
AcuI CTGAAG 1 cut(s) 414
AfaI GTAC 3 cut(s) 8, 110, 295
AfiI CCNNNNNNNGG 7 cut(s) 320, 343, 384, 571, 572, 620, 902
AgsI TTSAA 2 cut(s) 191, 712
AjiI CACGTC 2 cut(s) 27, 244
AjnI CCWGG 4 cut(s) 319, 565, 619, 968
AluBI AGCT 8 cut(s) 74, 124, 161, 266, 507, 743, 946, 960
AluI AGCT 8 cut(s) 74, 124, 161, 266, 507, 743, 946, 960
Alw21I GWGCWC 3 cut(s) 487, 948, 962
AlwI GGATC 8 cut(s) 262, 417, 430, 635, 661, 674, 760, 937
AoxI GGCC 1 cut(s) 174
ApeKI GCWGC 3 cut(s) 362, 580, 803
Asp700I GAANNNNTTC 1 cut(s) 89
AspS9I GGNCC 4 cut(s) 151, 183, 387, 677
AsuC2I CCSGG 2 cut(s) 344, 771
AsuHPI GGTGA 1 cut(s) 856
AsuNHI GCTAGC 1 cut(s) 266
AvaII GGWCC 4 cut(s) 151, 183, 387, 677
BamHI GGATCC 2 cut(s) 422, 666
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 2 cut(s) 948, 962
BarI GAAGNNNNNNTAC 2 cut(s) 286, 318
Bbv12I GWGCWC 3 cut(s) 487, 948, 962
BbvI GCAGC 3 cut(s) 349, 592, 815
BccI CCATC 2 cut(s) 374, 607
BceAI ACGGC 2 cut(s) 214, 641
BciT130I CCWGG 4 cut(s) 321, 567, 621, 970
BclI TGATCA 1 cut(s) 814
BcnI CCSGG 2 cut(s) 344, 771
BfaI CTAG 2 cut(s) 263, 267
BfmI CTRYAG 2 cut(s) 75, 822
BfuAI ACCTGC 1 cut(s) 375
BglII AGATCT 1 cut(s) 87
BisI GCNGC 4 cut(s) 81, 363, 581, 804
BlsI GCNGC 4 cut(s) 82, 364, 582, 805
BmcAI AGTACT 1 cut(s) 295
Bme1390I CCNGG 6 cut(s) 321, 344, 567, 621, 771, 970
Bme18I GGWCC 4 cut(s) 151, 183, 387, 677
BmgBI CACGTC 2 cut(s) 27, 244
BmgT120I GGNCC 4 cut(s) 151, 183, 387, 677
BmiI GGNNCC 4 cut(s) 202, 389, 424, 668
BmrFI CCNGG 6 cut(s) 321, 344, 567, 621, 771, 970
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 3 cut(s) 209, 356, 860
BmtI GCTAGC 1 cut(s) 270
BmuI ACTGGG 1 cut(s) 553
BpmI CTGGAG 1 cut(s) 962
BpuEI CTTGAG 1 cut(s) 946
BpuMI CCSGG 2 cut(s) 344, 771
BsaJI CCNNGG 9 cut(s) 319, 398, 466, 565, 566, 619, 673, 770, 896
BsaWI WCCGGW 1 cut(s) 193
BsaXI ACNNNNNCTCC 2 cut(s) 775, 805
Bsc4I CCNNNNNNNGG 7 cut(s) 320, 343, 384, 571, 572, 620, 902
Bse118I RCCGGY 3 cut(s) 95, 176, 806
Bse1I ACTGG 2 cut(s) 548, 553
Bse3DI GCAATG 1 cut(s) 798
BseBI CCWGG 4 cut(s) 321, 567, 621, 970
BseDI CCNNGG 9 cut(s) 319, 398, 466, 565, 566, 619, 673, 770, 896
BseGI GGATG 5 cut(s) 224, 462, 553, 736, 875
BseLI CCNNNNNNNGG 7 cut(s) 320, 343, 384, 571, 572, 620, 902
BseMI GCAATG 1 cut(s) 798
BseMII CTCAG 1 cut(s) 92
BseNI ACTGG 2 cut(s) 548, 553
BseRI GAGGAG 2 cut(s) 427, 600
BseXI GCAGC 3 cut(s) 349, 592, 815
BseYI CCCAGC 1 cut(s) 656
BshFI GGCC 1 cut(s) 176
BshNI GGYRCC 1 cut(s) 200
BsiHKAI GWGCWC 3 cut(s) 487, 948, 962
BsiSI CCGG 6 cut(s) 96, 177, 194, 344, 770, 807
BsiWI CGTACG 1 cut(s) 6
BslFI GGGAC 3 cut(s) 25, 373, 796
BslI CCNNNNNNNGG 7 cut(s) 320, 343, 384, 571, 572, 620, 902
BsmFI GGGAC 3 cut(s) 25, 373, 796
BsmI GAATGC 1 cut(s) 379
BsnI GGCC 1 cut(s) 176
Bsp1286I GDGCHC 3 cut(s) 487, 948, 962
Bsp143I GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
Bsp19I CCATGG 4 cut(s) 398, 466, 673, 896
BspACI CCGC 4 cut(s) 80, 211, 576, 780
BspANI GGCC 1 cut(s) 176
BspCNI CTCAG 1 cut(s) 93
BspLI GGNNCC 4 cut(s) 202, 389, 424, 668
BspMAI CTGCAG 1 cut(s) 826
BspMI ACCTGC 1 cut(s) 375
BspOI GCTAGC 1 cut(s) 270
BspPI GGATC 8 cut(s) 262, 417, 430, 635, 661, 674, 760, 937
BspQI GCTCTTC 2 cut(s) 64, 331
BspT107I GGYRCC 1 cut(s) 200
BsrDI GCAATG 1 cut(s) 798
BsrFI RCCGGY 3 cut(s) 95, 176, 806
BsrI ACTGG 2 cut(s) 548, 553
BssAI RCCGGY 3 cut(s) 95, 176, 806
BssECI CCNNGG 9 cut(s) 319, 398, 466, 565, 566, 619, 673, 770, 896
BssMI GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
BssT1I CCWWGG 4 cut(s) 398, 466, 673, 896
Bst2UI CCWGG 4 cut(s) 321, 567, 621, 970
Bst4CI ACNGT 1 cut(s) 187
Bst6I CTCTTC 6 cut(s) 49, 64, 331, 433, 445, 915
BstAPI GCANNNNNTGC 1 cut(s) 219
BstC8I GCNNGC 6 cut(s) 224, 228, 268, 562, 578, 808
BstDEI CTNAG 1 cut(s) 101
BstDSI CCRYGG 4 cut(s) 398, 466, 673, 896
BstF5I GGATG 5 cut(s) 224, 462, 553, 736, 875
BstKTI GATC 9 cut(s) 90, 257, 425, 643, 669, 755, 817, 932, 940
BstMBI GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
BstMWI GCNNNNNNNGC 6 cut(s) 80, 130, 219, 786, 803, 892
BstNI CCWGG 4 cut(s) 321, 567, 621, 970
BstNSI RCATGY 2 cut(s) 763, 789
BstSCI CCNGG 6 cut(s) 319, 342, 565, 619, 769, 968
BstSFI CTRYAG 2 cut(s) 75, 822
BstV1I GCAGC 3 cut(s) 349, 592, 815
BstX2I RGATCY 4 cut(s) 87, 422, 666, 752
BstYI RGATCY 4 cut(s) 87, 422, 666, 752
BsuRI GGCC 1 cut(s) 176
BtgI CCRYGG 4 cut(s) 398, 466, 673, 896
BtrI CACGTC 2 cut(s) 27, 244
BtsCI GGATG 5 cut(s) 224, 462, 553, 736, 875
BtsI GCAGTG 2 cut(s) 133, 819
BtsIMutI CAGTG 3 cut(s) 133, 487, 819
BveI ACCTGC 1 cut(s) 375
Cac8I GCNNGC 6 cut(s) 224, 228, 268, 562, 578, 808
Cfr10I RCCGGY 3 cut(s) 95, 176, 806
Cfr13I GGNCC 4 cut(s) 151, 183, 387, 677
CsiI ACCWGGT 1 cut(s) 968
Csp6I GTAC 3 cut(s) 7, 109, 294
CviAII CATG 8 cut(s) 238, 273, 399, 467, 674, 760, 786, 897
CviQI GTAC 3 cut(s) 7, 109, 294
DdeI CTNAG 1 cut(s) 101
DpnI GATC 9 cut(s) 89, 256, 424, 642, 668, 754, 816, 931, 939
DpnII GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
Eam1104I CTCTTC 6 cut(s) 49, 64, 331, 433, 445, 915
EarI CTCTTC 6 cut(s) 49, 64, 331, 433, 445, 915
Ecl136II GAGCTC 2 cut(s) 946, 960
Eco130I CCWWGG 4 cut(s) 398, 466, 673, 896
Eco24I GRGCYC 2 cut(s) 948, 962
Eco47I GGWCC 4 cut(s) 151, 183, 387, 677
Eco53kI GAGCTC 2 cut(s) 946, 960
Eco57I CTGAAG 1 cut(s) 414
EcoICRI GAGCTC 2 cut(s) 946, 960
EcoO109I RGGNCCY 2 cut(s) 151, 387
EcoRII CCWGG 4 cut(s) 319, 565, 619, 968
EcoT14I CCWWGG 4 cut(s) 398, 466, 673, 896
EcoT38I GRGCYC 2 cut(s) 948, 962
ErhI CCWWGG 4 cut(s) 398, 466, 673, 896
FaeI CATG 8 cut(s) 241, 276, 402, 470, 677, 763, 789, 900
FaqI GGGAC 3 cut(s) 25, 373, 796
FatI CATG 8 cut(s) 237, 272, 398, 466, 673, 759, 785, 896
FauI CCCGC 2 cut(s) 569, 773
FbaI TGATCA 1 cut(s) 814
Fnu4HI GCNGC 4 cut(s) 81, 363, 581, 804
FokI GGATG 5 cut(s) 231, 449, 560, 743, 882
FriOI GRGCYC 2 cut(s) 948, 962
Fsp4HI GCNGC 4 cut(s) 81, 363, 581, 804
FspBI CTAG 2 cut(s) 263, 267
GluI GCNGC 4 cut(s) 81, 363, 581, 804
GsaI CCCAGC 1 cut(s) 660
GsuI CTGGAG 1 cut(s) 962
HaeIII GGCC 1 cut(s) 176
HapII CCGG 6 cut(s) 96, 177, 194, 344, 770, 807
Hin1II CATG 8 cut(s) 241, 276, 402, 470, 677, 763, 789, 900
HinfI GANTC 4 cut(s) 13, 454, 766, 913
HpaII CCGG 6 cut(s) 96, 177, 194, 344, 770, 807
HphI GGTGA 1 cut(s) 856
Hpy166II GTNNAC 1 cut(s) 765
Hpy188I TCNGA 7 cut(s) 102, 372, 666, 814, 841, 853, 934
Hpy188III TCNNGA 6 cut(s) 420, 638, 644, 917, 941, 963
Hpy8I GTNNAC 1 cut(s) 765
Hpy99I CGWCG 2 cut(s) 28, 173
HpyAV CCTTC 5 cut(s) 25, 57, 343, 601, 896
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4IV ACGT 3 cut(s) 5, 26, 243
HpyCH4V TGCA 5 cut(s) 222, 803, 824, 863, 873
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 130, 219, 786, 803, 892
HpyF3I CTNAG 1 cut(s) 101
HpySE526I ACGT 3 cut(s) 5, 26, 243
Hsp92II CATG 8 cut(s) 241, 276, 402, 470, 677, 763, 789, 900
KroI GCCGGC 1 cut(s) 806
KroNI GCCGGC 1 cut(s) 808
Ksp22I TGATCA 1 cut(s) 814
Kzo9I GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
LguI GCTCTTC 2 cut(s) 64, 331
LmnI GCTCC 5 cut(s) 129, 490, 512, 943, 957
Lsp1109I GCAGC 3 cut(s) 349, 592, 815
LweI GCATC 3 cut(s) 209, 356, 860
MabI ACCWGGT 1 cut(s) 968
MaeI CTAG 2 cut(s) 263, 267
MaeII ACGT 3 cut(s) 5, 26, 243
MaeIII GTNAC 1 cut(s) 490
MalI GATC 9 cut(s) 89, 256, 424, 642, 668, 754, 816, 931, 939
MboI GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
MflI RGATCY 4 cut(s) 87, 422, 666, 752
MhlI GDGCHC 3 cut(s) 487, 948, 962
MlyI GAGTC 2 cut(s) 7, 760
MmeI TCCRAC 1 cut(s) 161
MroNI GCCGGC 1 cut(s) 806
MroXI GAANNNNTTC 1 cut(s) 89
MseI TTAA 3 cut(s) 503, 726, 891
MslI CAYNNNNRTG 3 cut(s) 242, 833, 868
MspI CCGG 6 cut(s) 96, 177, 194, 344, 770, 807
MspR9I CCNGG 6 cut(s) 321, 344, 567, 621, 771, 970
Mva1269I GAATGC 1 cut(s) 379
MvaI CCWGG 4 cut(s) 321, 567, 621, 970
MwoI GCNNNNNNNGC 6 cut(s) 80, 130, 219, 786, 803, 892
NaeI GCCGGC 1 cut(s) 808
NciI CCSGG 2 cut(s) 344, 771
NcoI CCATGG 4 cut(s) 398, 466, 673, 896
NdeII GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
NgoMIV GCCGGC 1 cut(s) 806
NheI GCTAGC 1 cut(s) 266
NlaIII CATG 8 cut(s) 241, 276, 402, 470, 677, 763, 789, 900
NlaIV GGNNCC 4 cut(s) 202, 389, 424, 668
NspI RCATGY 2 cut(s) 763, 789
PasI CCCWGGG 1 cut(s) 566
PciSI GCTCTTC 2 cut(s) 64, 331
PctI GAATGC 1 cut(s) 379
PdiI GCCGGC 1 cut(s) 808
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 2 cut(s) 454, 913
Pfl23II CGTACG 1 cut(s) 6
PflMI CCANNNNNTGG 1 cut(s) 620
PkrI GCNGC 4 cut(s) 82, 364, 582, 805
PleI GAGTC 2 cut(s) 7, 760
PpsI GAGTC 2 cut(s) 7, 760
PpuMI RGGWCCY 2 cut(s) 151, 387
Psp124BI GAGCTC 2 cut(s) 948, 962
Psp5II RGGWCCY 2 cut(s) 151, 387
Psp6I CCWGG 4 cut(s) 319, 565, 619, 968
PspFI CCCAGC 1 cut(s) 656
PspGI CCWGG 4 cut(s) 319, 565, 619, 968
PspLI CGTACG 1 cut(s) 6
PspN4I GGNNCC 4 cut(s) 202, 389, 424, 668
PspPI GGNCC 4 cut(s) 151, 183, 387, 677
PspPPI RGGWCCY 2 cut(s) 151, 387
PstI CTGCAG 1 cut(s) 826
PsuI RGATCY 4 cut(s) 87, 422, 666, 752
RsaI GTAC 3 cut(s) 8, 110, 295
RsaNI GTAC 3 cut(s) 7, 109, 294
RseI CAYNNNNRTG 3 cut(s) 242, 833, 868
SacI GAGCTC 2 cut(s) 948, 962
SapI GCTCTTC 2 cut(s) 64, 331
SaqAI TTAA 3 cut(s) 503, 726, 891
SatI GCNGC 4 cut(s) 81, 363, 581, 804
Sau3AI GATC 9 cut(s) 87, 254, 422, 640, 666, 752, 814, 929, 937
Sau96I GGNCC 4 cut(s) 151, 183, 387, 677
ScaI AGTACT 1 cut(s) 295
SchI GAGTC 2 cut(s) 7, 760
ScrFI CCNGG 6 cut(s) 321, 344, 567, 621, 771, 970
SduI GDGCHC 3 cut(s) 487, 948, 962
SexAI ACCWGGT 1 cut(s) 968
SfaNI GCATC 3 cut(s) 209, 356, 860
SfcI CTRYAG 2 cut(s) 75, 822
SinI GGWCC 4 cut(s) 151, 183, 387, 677
SmiMI CAYNNNNRTG 3 cut(s) 242, 833, 868
SmlI CTYRAG 1 cut(s) 961
SmoI CTYRAG 1 cut(s) 961
SsiI CCGC 4 cut(s) 80, 211, 576, 780
SspMI CTAG 2 cut(s) 263, 267
SstI GAGCTC 2 cut(s) 948, 962
StyD4I CCNGG 6 cut(s) 319, 342, 565, 619, 769, 968
StyI CCWWGG 4 cut(s) 398, 466, 673, 896
TaaI ACNGT 1 cut(s) 187
TaiI ACGT 3 cut(s) 8, 29, 246
TaqI TCGA 1 cut(s) 257
TatI WGTACW 1 cut(s) 293
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 2 cut(s) 454, 913
Tru1I TTAA 3 cut(s) 503, 726, 891
Tru9I TTAA 3 cut(s) 503, 726, 891
TscAI CASTG 3 cut(s) 140, 487, 826
TseI GCWGC 3 cut(s) 362, 580, 803
TspDTI ATGAA 1 cut(s) 548
TspRI CASTG 3 cut(s) 140, 487, 826
Van91I CCANNNNNTGG 1 cut(s) 620
VpaK11BI GGWCC 4 cut(s) 151, 183, 387, 677
XceI RCATGY 2 cut(s) 763, 789
XmnI GAANNNNTTC 1 cut(s) 89
XspI CTAG 2 cut(s) 263, 267
ZrmI AGTACT 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.