pycom11g23500

BES1 BZR1 homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0009842
Physical Location & Seq
Forward (+)
26474935 .. 26477884
2950 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g23500.2

Sequence Viewer

Length: 1020 bp
ATGACGTCGGGGACGCGAATGCCGACGTGGAAGGAGAGAGAGAACAACAAGAGAAGAGAGAGGAGGCGGAGGGCCATAGCGGCGAAGATCTTTGCCGGCCTGAGATTGTACGGAAACTACAAGCTCCCCAAGCACTGCGATAACAATGAGGTCCTCAAGGCTCTCTGCGACGAGGCCGGTTGGACCGTCGAATTGGACGGCACCACTTACCGCAAGGGATGCCAGCCGGTCAAACACATGGACGTGATGGGTGGATCCACATTAGCTAGCCCAAGCTCGTCTTTCCTCCAAAGTAATCGTGCTTCCTACAATCCAAGCCCAGGCTCTTCCTCCATCCCTAGCCCAACATCATCTTCCTATGCTGCTAACCAGAATGCTGATGGCAGATCCCTTATCCCATGGCTCAAAAATCTCTCCTCTGCATCCTCTTCAGCCTCCTCTTCCAAACTACCGAACCTCTACATCCATGGTGGCTCTATCAGTGCTCCTGTTACCCCTCCATTAAGCTCCCCAACTGCCAGGACACCGAGAATGAGAACTGACTGGGATGACCAGTCTGCTCGGCCAGGCTGGGCTGGGCAGCAATTCCCCTTCCTGCCATCTTCTACTCCACCAAGCCCTGGACAGCAGATTGTTCCTGATCCAGAATGGTTTGCTGGGATTCCGGTTCCCCGTGGACCAAATTCTCCAACATTCAGCCTTGTCTCTTCAAACCCATTTGGGTTTAAGGACGAGGTTTTAGCCGGTGGTGGATCCCGCCTGTGGACTCCCGGGCAAAGTGGGACATGCTCTCCTGCCATTGCAGCTGGCTCTGATCACACTGCTGACATCCCCATGTCCGAGGTGATTTCTGATGAGTTTGCATTTGGATGCAATACAACAGGGCTGGTTAAGGCATGGGAAGGAGAGAAGATTCATGAAGAGTGTGGATCCGATGACCTGGAGCTCACTCTTGGGAGCTCAAGAACAAGGTGTGTTAGCTTAAACATTAGATTTGCAACATCGTGTGTATTGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BES1_N

Protein Analysis

340

Amino Acids

36.42

Weight (kDa)

8.6

Isoelectric Point (pI)

59.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
AccB1I GGYRCC 1 cut(s) 200
AccB7I CCANNNNNTGG 1 cut(s) 620
AccII CGCG 1 cut(s) 16
AciI CCGC 4 cut(s) 67, 80, 211, 757
AclWI GGATC 8 cut(s) 249, 262, 381, 635, 747, 760, 924, 937
AcoI YGGCCR 1 cut(s) 563
AcsI RAATTY 1 cut(s) 682
AcuI CTGAAG 1 cut(s) 414
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 110
AfiI CCNNNNNNNGG 3 cut(s) 320, 620, 762
AgsI TTSAA 1 cut(s) 711
AjiI CACGTC 2 cut(s) 27, 244
AjnI CCWGG 5 cut(s) 319, 518, 565, 619, 939
AjuI GAANNNNNNNTTGG 2 cut(s) 337, 369
AluBI AGCT 8 cut(s) 124, 266, 276, 507, 806, 946, 960, 981
AluI AGCT 8 cut(s) 124, 266, 276, 507, 806, 946, 960, 981
Alw21I GWGCWC 3 cut(s) 487, 948, 962
Alw26I GTCTC 1 cut(s) 709
AlwI GGATC 8 cut(s) 249, 262, 381, 635, 747, 760, 924, 937
Ama87I CYCGRG 1 cut(s) 770
AoxI GGCC 4 cut(s) 72, 97, 174, 563
ApeKI GCWGC 3 cut(s) 362, 580, 803
ApoI RAATTY 1 cut(s) 682
AspS9I GGNCC 4 cut(s) 72, 151, 183, 677
AsuC2I CCSGG 2 cut(s) 771, 772
AsuHPI GGTGA 1 cut(s) 856
AsuNHI GCTAGC 1 cut(s) 266
AvaI CYCGRG 1 cut(s) 770
AvaII GGWCC 3 cut(s) 151, 183, 677
BamHI GGATCC 3 cut(s) 254, 752, 929
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 2 cut(s) 948, 962
BarI GAAGNNNNNNTAC 2 cut(s) 286, 318
Bbv12I GWGCWC 3 cut(s) 487, 948, 962
BbvI GCAGC 3 cut(s) 349, 592, 815
BccI CCATC 4 cut(s) 241, 341, 374, 607
BceAI ACGGC 1 cut(s) 214
BciT130I CCWGG 5 cut(s) 321, 520, 567, 621, 941
BclI TGATCA 1 cut(s) 814
BcnI CCSGG 2 cut(s) 771, 772
BcoDI GTCTC 1 cut(s) 709
BfaI CTAG 2 cut(s) 267, 339
BglI GCCNNNNNGGC 1 cut(s) 80
BglII AGATCT 1 cut(s) 87
BisI GCNGC 4 cut(s) 81, 363, 581, 804
BlsI GCNGC 4 cut(s) 82, 364, 582, 805
Bme1390I CCNGG 7 cut(s) 321, 520, 567, 621, 771, 772, 941
Bme18I GGWCC 3 cut(s) 151, 183, 677
BmeT110I CYCGRG 1 cut(s) 770
BmgBI CACGTC 2 cut(s) 27, 244
BmgT120I GGNCC 4 cut(s) 72, 151, 183, 677
BmiI GGNNCC 5 cut(s) 202, 256, 669, 754, 931
BmrFI CCNGG 7 cut(s) 321, 520, 567, 621, 771, 772, 941
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 3 cut(s) 209, 431, 860
BmtI GCTAGC 1 cut(s) 270
BmuI ACTGGG 1 cut(s) 553
BpmI CTGGAG 1 cut(s) 962
BpuEI CTTGAG 2 cut(s) 140, 946
BpuMI CCSGG 2 cut(s) 771, 772
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 7 cut(s) 319, 398, 466, 619, 673, 770, 840
BsaWI WCCGGW 1 cut(s) 664
BsaXI ACNNNNNCTCC 2 cut(s) 775, 805
Bsc4I CCNNNNNNNGG 3 cut(s) 320, 620, 762
Bse118I RCCGGY 4 cut(s) 95, 176, 226, 743
Bse1I ACTGG 2 cut(s) 548, 553
Bse3DI GCAATG 1 cut(s) 798
BseBI CCWGG 5 cut(s) 321, 520, 567, 621, 941
BseDI CCNNGG 7 cut(s) 319, 398, 466, 619, 673, 770, 840
BseGI GGATG 7 cut(s) 224, 333, 422, 462, 553, 828, 875
BseLI CCNNNNNNNGG 3 cut(s) 320, 620, 762
BseMI GCAATG 1 cut(s) 798
BseMII CTCAG 1 cut(s) 92
BseNI ACTGG 2 cut(s) 548, 553
BseRI GAGGAG 3 cut(s) 76, 406, 427
BseXI GCAGC 3 cut(s) 349, 592, 815
BseYI CCCAGC 3 cut(s) 570, 575, 656
Bsh1236I CGCG 1 cut(s) 16
BshFI GGCC 4 cut(s) 74, 99, 176, 565
BshNI GGYRCC 1 cut(s) 200
BsiHKAI GWGCWC 3 cut(s) 487, 948, 962
BsiHKCI CYCGRG 1 cut(s) 770
BsiSI CCGG 6 cut(s) 96, 177, 227, 665, 744, 771
BslFI GGGAC 2 cut(s) 25, 796
BslI CCNNNNNNNGG 3 cut(s) 320, 620, 762
BsmAI GTCTC 1 cut(s) 709
BsmFI GGGAC 2 cut(s) 25, 796
BsmI GAATGC 2 cut(s) 24, 379
BsnI GGCC 4 cut(s) 74, 99, 176, 565
BsoBI CYCGRG 1 cut(s) 770
Bsp1286I GDGCHC 3 cut(s) 487, 948, 962
Bsp143I GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
Bsp19I CCATGG 2 cut(s) 398, 466
BspACI CCGC 4 cut(s) 67, 80, 211, 757
BspANI GGCC 4 cut(s) 74, 99, 176, 565
BspCNI CTCAG 1 cut(s) 93
BspFNI CGCG 1 cut(s) 16
BspHI TCATGA 1 cut(s) 916
BspLI GGNNCC 5 cut(s) 202, 256, 669, 754, 931
BspOI GCTAGC 1 cut(s) 270
BspPI GGATC 8 cut(s) 249, 262, 381, 635, 747, 760, 924, 937
BspQI GCTCTTC 1 cut(s) 331
BspT107I GGYRCC 1 cut(s) 200
BsrDI GCAATG 1 cut(s) 798
BsrFI RCCGGY 4 cut(s) 95, 176, 226, 743
BsrI ACTGG 2 cut(s) 548, 553
BssAI RCCGGY 4 cut(s) 95, 176, 226, 743
BssECI CCNNGG 7 cut(s) 319, 398, 466, 619, 673, 770, 840
BssMI GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 398, 466
Bst2UI CCWGG 5 cut(s) 321, 520, 567, 621, 941
Bst4CI ACNGT 1 cut(s) 187
Bst6I CTCTTC 6 cut(s) 49, 331, 433, 445, 712, 915
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 219
BstC8I GCNNGC 4 cut(s) 97, 224, 268, 808
BstDEI CTNAG 1 cut(s) 101
BstDSI CCRYGG 3 cut(s) 398, 466, 673
BstF5I GGATG 7 cut(s) 224, 333, 422, 462, 553, 828, 875
BstFNI CGCG 1 cut(s) 16
BstKTI GATC 7 cut(s) 90, 257, 389, 643, 755, 817, 932
BstMAI GTCTC 1 cut(s) 709
BstMBI GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
BstMWI GCNNNNNNNGC 4 cut(s) 80, 130, 219, 803
BstNI CCWGG 5 cut(s) 321, 520, 567, 621, 941
BstNSI RCATGY 1 cut(s) 789
BstSCI CCNGG 7 cut(s) 319, 518, 565, 619, 769, 770, 939
BstUI CGCG 1 cut(s) 16
BstV1I GCAGC 3 cut(s) 349, 592, 815
BstX2I RGATCY 5 cut(s) 87, 254, 386, 752, 929
BstYI RGATCY 5 cut(s) 87, 254, 386, 752, 929
BsuRI GGCC 4 cut(s) 74, 99, 176, 565
BtgI CCRYGG 3 cut(s) 398, 466, 673
BtrI CACGTC 2 cut(s) 27, 244
BtsCI GGATG 7 cut(s) 224, 333, 422, 462, 553, 828, 875
BtsI GCAGTG 2 cut(s) 133, 819
BtsIMutI CAGTG 3 cut(s) 133, 487, 819
Cac8I GCNNGC 4 cut(s) 97, 224, 268, 808
CciI TCATGA 1 cut(s) 916
Cfr10I RCCGGY 4 cut(s) 95, 176, 226, 743
Cfr13I GGNCC 4 cut(s) 72, 151, 183, 677
Cfr9I CCCGGG 1 cut(s) 770
CseI GACGC 1 cut(s) 22
Csp6I GTAC 1 cut(s) 109
CviAII CATG 7 cut(s) 238, 399, 467, 786, 835, 897, 917
CviQI GTAC 1 cut(s) 109
DdeI CTNAG 1 cut(s) 101
DpnI GATC 7 cut(s) 89, 256, 388, 642, 754, 816, 931
DpnII GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
EaeI YGGCCR 1 cut(s) 563
Eam1104I CTCTTC 6 cut(s) 49, 331, 433, 445, 712, 915
EarI CTCTTC 6 cut(s) 49, 331, 433, 445, 712, 915
EciI GGCGGA 1 cut(s) 82
Ecl136II GAGCTC 2 cut(s) 946, 960
Eco130I CCWWGG 2 cut(s) 398, 466
Eco24I GRGCYC 2 cut(s) 948, 962
Eco47I GGWCC 3 cut(s) 151, 183, 677
Eco53kI GAGCTC 2 cut(s) 946, 960
Eco57I CTGAAG 1 cut(s) 414
Eco88I CYCGRG 1 cut(s) 770
EcoICRI GAGCTC 2 cut(s) 946, 960
EcoO109I RGGNCCY 1 cut(s) 151
EcoRII CCWGG 5 cut(s) 319, 518, 565, 619, 939
EcoT14I CCWWGG 2 cut(s) 398, 466
EcoT38I GRGCYC 2 cut(s) 948, 962
ErhI CCWWGG 2 cut(s) 398, 466
FaeI CATG 7 cut(s) 241, 402, 470, 789, 838, 900, 920
FaiI YATR 9 cut(s) 77, 239, 360, 400, 468, 787, 836, 898, 918
FalI AAGNNNNNCTT 2 cut(s) 265, 297
FaqI GGGAC 2 cut(s) 25, 796
FatI CATG 7 cut(s) 237, 398, 466, 785, 834, 896, 916
FauI CCCGC 1 cut(s) 764
FbaI TGATCA 1 cut(s) 814
Fnu4HI GCNGC 4 cut(s) 81, 363, 581, 804
FokI GGATG 7 cut(s) 231, 320, 409, 449, 560, 815, 882
FriOI GRGCYC 2 cut(s) 948, 962
Fsp4HI GCNGC 4 cut(s) 81, 363, 581, 804
FspBI CTAG 2 cut(s) 267, 339
GluI GCNGC 4 cut(s) 81, 363, 581, 804
GsaI CCCAGC 3 cut(s) 574, 579, 660
GsuI CTGGAG 1 cut(s) 962
HaeIII GGCC 4 cut(s) 74, 99, 176, 565
HapII CCGG 6 cut(s) 96, 177, 227, 665, 744, 771
HgaI GACGC 1 cut(s) 22
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 7 cut(s) 241, 402, 470, 789, 838, 900, 920
HinfI GANTC 3 cut(s) 661, 766, 913
HpaII CCGG 6 cut(s) 96, 177, 227, 665, 744, 771
HphI GGTGA 1 cut(s) 856
Hpy166II GTNNAC 2 cut(s) 677, 765
Hpy188I TCNGA 5 cut(s) 814, 841, 853, 934, 1019
Hpy188III TCNNGA 4 cut(s) 638, 644, 917, 963
Hpy8I GTNNAC 2 cut(s) 677, 765
Hpy99I CGWCG 4 cut(s) 10, 28, 173, 191
HpyAV CCTTC 3 cut(s) 25, 601, 896
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4IV ACGT 3 cut(s) 5, 26, 243
HpyCH4V TGCA 5 cut(s) 422, 803, 863, 873, 998
HpyF10VI GCNNNNNNNGC 4 cut(s) 80, 130, 219, 803
HpyF3I CTNAG 1 cut(s) 101
HpySE526I ACGT 3 cut(s) 5, 26, 243
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 7 cut(s) 241, 402, 470, 789, 838, 900, 920
KroI GCCGGC 1 cut(s) 95
KroNI GCCGGC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 814
Kzo9I GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
LguI GCTCTTC 1 cut(s) 331
LmnI GCTCC 5 cut(s) 129, 490, 512, 943, 957
Lsp1109I GCAGC 3 cut(s) 349, 592, 815
LweI GCATC 3 cut(s) 209, 431, 860
MaeI CTAG 2 cut(s) 267, 339
MaeII ACGT 3 cut(s) 5, 26, 243
MaeIII GTNAC 1 cut(s) 490
MalI GATC 7 cut(s) 89, 256, 388, 642, 754, 816, 931
MboI GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
MflI RGATCY 5 cut(s) 87, 254, 386, 752, 929
MhlI GDGCHC 3 cut(s) 487, 948, 962
MluCI AATT 3 cut(s) 191, 584, 682
MlyI GAGTC 1 cut(s) 760
MmeI TCCRAC 2 cut(s) 161, 713
MroNI GCCGGC 1 cut(s) 95
MseI TTAA 4 cut(s) 503, 726, 891, 983
MslI CAYNNNNRTG 3 cut(s) 242, 833, 868
MspA1I CMGCKG 1 cut(s) 806
MspI CCGG 6 cut(s) 96, 177, 227, 665, 744, 771
MspR9I CCNGG 7 cut(s) 321, 520, 567, 621, 771, 772, 941
Mva1269I GAATGC 2 cut(s) 24, 379
MvaI CCWGG 5 cut(s) 321, 520, 567, 621, 941
MvnI CGCG 1 cut(s) 16
MwoI GCNNNNNNNGC 4 cut(s) 80, 130, 219, 803
NaeI GCCGGC 1 cut(s) 97
NciI CCSGG 2 cut(s) 771, 772
NcoI CCATGG 2 cut(s) 398, 466
NdeII GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
NgoMIV GCCGGC 1 cut(s) 95
NheI GCTAGC 1 cut(s) 266
NlaIII CATG 7 cut(s) 241, 402, 470, 789, 838, 900, 920
NlaIV GGNNCC 5 cut(s) 202, 256, 669, 754, 931
NmeAIII GCCGAG 1 cut(s) 541
NspI RCATGY 1 cut(s) 789
PagI TCATGA 1 cut(s) 916
PciSI GCTCTTC 1 cut(s) 331
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 2 cut(s) 24, 379
PdiI GCCGGC 1 cut(s) 97
PfeI GAWTC 2 cut(s) 661, 913
PflMI CCANNNNNTGG 1 cut(s) 620
PkrI GCNGC 4 cut(s) 82, 364, 582, 805
PleI GAGTC 1 cut(s) 760
PpsI GAGTC 1 cut(s) 760
PpuMI RGGWCCY 1 cut(s) 151
Psp124BI GAGCTC 2 cut(s) 948, 962
Psp5II RGGWCCY 1 cut(s) 151
Psp6I CCWGG 5 cut(s) 319, 518, 565, 619, 939
PspFI CCCAGC 3 cut(s) 570, 575, 656
PspGI CCWGG 5 cut(s) 319, 518, 565, 619, 939
PspN4I GGNNCC 5 cut(s) 202, 256, 669, 754, 931
PspPI GGNCC 4 cut(s) 72, 151, 183, 677
PspPPI RGGWCCY 1 cut(s) 151
PsuI RGATCY 5 cut(s) 87, 254, 386, 752, 929
PvuII CAGCTG 1 cut(s) 806
RsaI GTAC 1 cut(s) 110
RsaNI GTAC 1 cut(s) 109
RseI CAYNNNNRTG 3 cut(s) 242, 833, 868
SacI GAGCTC 2 cut(s) 948, 962
SapI GCTCTTC 1 cut(s) 331
SaqAI TTAA 4 cut(s) 503, 726, 891, 983
SatI GCNGC 4 cut(s) 81, 363, 581, 804
Sau3AI GATC 7 cut(s) 87, 254, 386, 640, 752, 814, 929
Sau96I GGNCC 4 cut(s) 72, 151, 183, 677
SchI GAGTC 1 cut(s) 760
ScrFI CCNGG 7 cut(s) 321, 520, 567, 621, 771, 772, 941
SduI GDGCHC 3 cut(s) 487, 948, 962
SfaNI GCATC 3 cut(s) 209, 431, 860
SinI GGWCC 3 cut(s) 151, 183, 677
SmaI CCCGGG 1 cut(s) 772
SmiMI CAYNNNNRTG 3 cut(s) 242, 833, 868
SmlI CTYRAG 2 cut(s) 155, 961
SmoI CTYRAG 2 cut(s) 155, 961
Sse9I AATT 3 cut(s) 191, 584, 682
SsiI CCGC 4 cut(s) 67, 80, 211, 757
SspMI CTAG 2 cut(s) 267, 339
SstI GAGCTC 2 cut(s) 948, 962
StyD4I CCNGG 7 cut(s) 319, 518, 565, 619, 769, 770, 939
StyI CCWWGG 2 cut(s) 398, 466
TaaI ACNGT 1 cut(s) 187
TaiI ACGT 3 cut(s) 8, 29, 246
TaqI TCGA 1 cut(s) 189
TasI AATT 3 cut(s) 191, 584, 682
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 2 cut(s) 661, 913
Tru1I TTAA 4 cut(s) 503, 726, 891, 983
Tru9I TTAA 4 cut(s) 503, 726, 891, 983
TscAI CASTG 3 cut(s) 140, 487, 826
TseI GCWGC 3 cut(s) 362, 580, 803
TspDTI ATGAA 2 cut(s) 905, 933
TspGWI ACGGA 1 cut(s) 126
TspMI CCCGGG 1 cut(s) 770
TspRI CASTG 3 cut(s) 140, 487, 826
Van91I CCANNNNNTGG 1 cut(s) 620
VpaK11BI GGWCC 3 cut(s) 151, 183, 677
XapI RAATTY 1 cut(s) 682
XceI RCATGY 1 cut(s) 789
XcmI CCANNNNNNNNNTGG 1 cut(s) 377
XmaI CCCGGG 1 cut(s) 770
XspI CTAG 2 cut(s) 267, 339
ZraI GACGTC 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.