RLG00000033211

BES1 BZR1 homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0009842
Physical Location & Seq
Reverse (-)
24501034 .. 24503596
2563 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033211

Sequence Viewer

Length: 960 bp
ATGACGTCAGGCACGCGGCTGCCGAGCTGGAAGGAGAGAGAGAACAACAAGAGGAGGGAGAGAAGGCGAAGGGCTATAGCGGCGAAGATCTTCGCCGGACTCAGAATGTACGGCAACTTTAAGCTCCCCAAGCACTGCGACAACAACGAGGTCCTCAAAGCTCTCTGTAACGAGGCCGGTTGGACCGTCGAGCTCGACGGCACCACGTACCGCAAGGGATGCAAGCCTGTTGAACGCAAGGACATTGTGGACGGATCAACAGCTGCTAGCCCAAGTAACTATGCTTCCTACAATCCAAGCCCTGGCTCATCCTCCTTCCCTAGCCCAGCATCATCTTCCTATGCTGCTAATCAGAATGTTGATGGAAGTTCCCTTATCCCATGGCTAAAACATCTCTCATCCGGATCCTCTTCAGCCTCCTCTTCCAAGCTACCAAATATTTACATCCACGGTGGTTCTATCAGTGCACCTGTCACTCCTCCATTGAGCTCTCCAACTGCCAGGACACCCCGAATGAACACGGACTGGGACGAACAGTCTGCCCGCCCAGGATGGGGTGGGCAGCAGTACTCCTTCCTGCCTTCTTCTACTCCACCAAGTCCTGGCCGGCAGATTATTCCTGATCCCGAATGGTTTTCTGGGATTCGGATTCCCCATGGACCAACTTCTCCAACATTTAGCCTTGTCTCTTCAAACCCATTTGGGTTCAAGGAAGAGGCTTTAGCTGGTGGAGGCTCTCGAATGTGGACTCCTGGACAGAGTGGGACATGCTCTCCTGCCATTGCAGCAGGCTCTGATCACACTGCGGACATTCCAATGTCTGAGGTGATTTCTGACGAGTTTGCATTCGGATCATGCAACACAGCAGGGCTGGTTAAGGCATGGGAAGGCGAGAGGATTCATGAAGAATCCGGATCTGATGATTTAGAGCTCACTCTTGGGTGCTCAAAAACCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BES1_N

Protein Analysis

320

Amino Acids

34.2

Weight (kDa)

8.18

Isoelectric Point (pI)

56.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BES1_N PF05687 4 - 132 5.3e-54 BES1/BZR1 plant transcription factor, N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
AccB1I GGYRCC 1 cut(s) 200
AccB7I CCANNNNNTGG 2 cut(s) 302, 602
AccII CGCG 1 cut(s) 16
AccIII TCCGGA 2 cut(s) 401, 911
AciI CCGC 5 cut(s) 16, 80, 211, 544, 806
AclWI GGATC 6 cut(s) 262, 399, 412, 617, 859, 922
AcoI YGGCCR 1 cut(s) 604
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 3 cut(s) 110, 209, 569
AfiI CCNNNNNNNGG 4 cut(s) 302, 553, 554, 602
AgsI TTSAA 3 cut(s) 233, 693, 709
AhdI GACNNNNNGTC 1 cut(s) 535
AjnI CCWGG 6 cut(s) 301, 500, 547, 601, 751, 953
AluBI AGCT 9 cut(s) 27, 124, 161, 193, 263, 430, 489, 725, 931
AluI AGCT 9 cut(s) 27, 124, 161, 193, 263, 430, 489, 725, 931
Alw21I GWGCWC 5 cut(s) 195, 469, 491, 933, 947
Alw26I GTCTC 1 cut(s) 691
Alw44I GTGCAC 1 cut(s) 465
AlwI GGATC 6 cut(s) 262, 399, 412, 617, 859, 922
AlwNI CAGNNNCTG 1 cut(s) 794
Aor13HI TCCGGA 2 cut(s) 401, 911
AoxI GGCC 2 cut(s) 174, 604
ApaLI GTGCAC 1 cut(s) 465
ApeKI GCWGC 5 cut(s) 19, 263, 344, 562, 785
Asp700I GAANNNNTTC 1 cut(s) 89
AspS9I GGNCC 3 cut(s) 151, 183, 659
AsuHPI GGTGA 1 cut(s) 838
AsuNHI GCTAGC 1 cut(s) 266
AvaII GGWCC 3 cut(s) 151, 183, 659
BaeGI GKGCMC 1 cut(s) 469
BamHI GGATCC 1 cut(s) 404
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 3 cut(s) 195, 491, 933
BarI GAAGNNNNNNTAC 2 cut(s) 268, 300
Bbv12I GWGCWC 5 cut(s) 195, 469, 491, 933, 947
BbvI GCAGC 5 cut(s) 6, 250, 331, 574, 797
BccI CCATC 2 cut(s) 356, 546
BceAI ACGGC 2 cut(s) 127, 214
BcgI CGANNNNNNTGC 2 cut(s) 521, 555
BciT130I CCWGG 6 cut(s) 303, 502, 549, 603, 753, 955
BclI TGATCA 1 cut(s) 796
BcoDI GTCTC 1 cut(s) 691
BfaI CTAG 2 cut(s) 267, 321
BfmI CTRYAG 1 cut(s) 75
BglII AGATCT 1 cut(s) 87
BisI GCNGC 7 cut(s) 17, 20, 81, 264, 345, 563, 786
BlsI GCNGC 7 cut(s) 18, 21, 82, 265, 346, 564, 787
BmcAI AGTACT 1 cut(s) 569
Bme1390I CCNGG 6 cut(s) 303, 502, 549, 603, 753, 955
Bme18I GGWCC 3 cut(s) 151, 183, 659
BmeRI GACNNNNNGTC 1 cut(s) 535
BmgT120I GGNCC 3 cut(s) 151, 183, 659
BmiI GGNNCC 2 cut(s) 202, 406
BmrFI CCNGG 6 cut(s) 303, 502, 549, 603, 753, 955
BmrI ACTGGG 1 cut(s) 535
BmsI GCATC 2 cut(s) 209, 338
BmtI GCTAGC 1 cut(s) 270
BmuI ACTGGG 1 cut(s) 535
BsaAI YACGTR 1 cut(s) 207
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 5 cut(s) 301, 380, 448, 547, 655
BsaWI WCCGGW 2 cut(s) 401, 911
BsaXI ACNNNNNCTCC 2 cut(s) 757, 787
Bsc4I CCNNNNNNNGG 4 cut(s) 302, 553, 554, 602
Bse118I RCCGGY 2 cut(s) 176, 606
Bse1I ACTGG 1 cut(s) 530
Bse3DI GCAATG 1 cut(s) 780
BseAI TCCGGA 2 cut(s) 401, 911
BseBI CCWGG 6 cut(s) 303, 502, 549, 603, 753, 955
BseDI CCNNGG 5 cut(s) 301, 380, 448, 547, 655
BseGI GGATG 5 cut(s) 224, 308, 398, 444, 557
BseLI CCNNNNNNNGG 4 cut(s) 302, 553, 554, 602
BseMI GCAATG 1 cut(s) 780
BseMII CTCAG 2 cut(s) 115, 813
BseNI ACTGG 1 cut(s) 530
BseRI GAGGAG 3 cut(s) 67, 409, 468
BseSI GKGCMC 1 cut(s) 469
BseXI GCAGC 5 cut(s) 6, 250, 331, 574, 797
BseYI CCCAGC 1 cut(s) 325
Bsh1236I CGCG 1 cut(s) 16
BshFI GGCC 2 cut(s) 176, 606
BshNI GGYRCC 1 cut(s) 200
BsiHKAI GWGCWC 5 cut(s) 195, 469, 491, 933, 947
BsiSI CCGG 5 cut(s) 96, 177, 402, 607, 912
BslFI GGGAC 2 cut(s) 542, 778
BslI CCNNNNNNNGG 4 cut(s) 302, 553, 554, 602
BsmAI GTCTC 1 cut(s) 691
BsmFI GGGAC 2 cut(s) 542, 778
BsmI GAATGC 1 cut(s) 845
BsnI GGCC 2 cut(s) 176, 606
Bsp1286I GDGCHC 5 cut(s) 195, 469, 491, 933, 947
Bsp13I TCCGGA 2 cut(s) 401, 911
Bsp143I GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
Bsp19I CCATGG 2 cut(s) 380, 655
BspACI CCGC 5 cut(s) 16, 80, 211, 544, 806
BspANI GGCC 2 cut(s) 176, 606
BspCNI CTCAG 2 cut(s) 114, 814
BspEI TCCGGA 2 cut(s) 401, 911
BspFNI CGCG 1 cut(s) 16
BspHI TCATGA 1 cut(s) 901
BspLI GGNNCC 2 cut(s) 202, 406
BspOI GCTAGC 1 cut(s) 270
BspPI GGATC 6 cut(s) 262, 399, 412, 617, 859, 922
BspT107I GGYRCC 1 cut(s) 200
BsrDI GCAATG 1 cut(s) 780
BsrFI RCCGGY 2 cut(s) 176, 606
BsrI ACTGG 1 cut(s) 530
BssAI RCCGGY 2 cut(s) 176, 606
BssECI CCNNGG 5 cut(s) 301, 380, 448, 547, 655
BssMI GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 380, 655
Bst2UI CCWGG 6 cut(s) 303, 502, 549, 603, 753, 955
Bst4CI ACNGT 3 cut(s) 187, 452, 537
Bst6I CTCTTC 4 cut(s) 415, 427, 694, 708
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 219
BstBAI YACGTR 1 cut(s) 207
BstC8I GCNNGC 6 cut(s) 14, 224, 268, 544, 608, 790
BstDEI CTNAG 2 cut(s) 101, 822
BstDSI CCRYGG 3 cut(s) 380, 448, 655
BstF5I GGATG 5 cut(s) 224, 308, 398, 444, 557
BstFNI CGCG 1 cut(s) 16
BstKTI GATC 7 cut(s) 90, 257, 407, 625, 799, 854, 917
BstMAI GTCTC 1 cut(s) 691
BstMBI GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
BstMWI GCNNNNNNNGC 4 cut(s) 80, 130, 219, 785
BstNI CCWGG 6 cut(s) 303, 502, 549, 603, 753, 955
BstNSI RCATGY 1 cut(s) 771
BstSCI CCNGG 6 cut(s) 301, 500, 547, 601, 751, 953
BstSFI CTRYAG 1 cut(s) 75
BstSLI GKGCMC 1 cut(s) 469
BstUI CGCG 1 cut(s) 16
BstV1I GCAGC 5 cut(s) 6, 250, 331, 574, 797
BstX2I RGATCY 3 cut(s) 87, 404, 914
BstYI RGATCY 3 cut(s) 87, 404, 914
BsuRI GGCC 2 cut(s) 176, 606
BtgI CCRYGG 3 cut(s) 380, 448, 655
BtsCI GGATG 5 cut(s) 224, 308, 398, 444, 557
BtsI GCAGTG 2 cut(s) 133, 801
BtsIMutI CAGTG 3 cut(s) 133, 469, 801
Cac8I GCNNGC 6 cut(s) 14, 224, 268, 544, 608, 790
CaiI CAGNNNCTG 1 cut(s) 794
CciI TCATGA 1 cut(s) 901
Cfr10I RCCGGY 2 cut(s) 176, 606
Cfr13I GGNCC 3 cut(s) 151, 183, 659
CsiI ACCWGGT 1 cut(s) 953
Csp6I GTAC 3 cut(s) 109, 208, 568
CviAII CATG 6 cut(s) 381, 656, 768, 855, 882, 902
CviQI GTAC 3 cut(s) 109, 208, 568
DdeI CTNAG 2 cut(s) 101, 822
DpnI GATC 7 cut(s) 89, 256, 406, 624, 798, 853, 916
DpnII GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
DriI GACNNNNNGTC 1 cut(s) 535
EaeI YGGCCR 1 cut(s) 604
Eam1104I CTCTTC 4 cut(s) 415, 427, 694, 708
Eam1105I GACNNNNNGTC 1 cut(s) 535
EarI CTCTTC 4 cut(s) 415, 427, 694, 708
Ecl136II GAGCTC 3 cut(s) 193, 489, 931
Eco130I CCWWGG 2 cut(s) 380, 655
Eco24I GRGCYC 3 cut(s) 195, 491, 933
Eco47I GGWCC 3 cut(s) 151, 183, 659
Eco53kI GAGCTC 3 cut(s) 193, 489, 931
Eco57I CTGAAG 1 cut(s) 396
EcoICRI GAGCTC 3 cut(s) 193, 489, 931
EcoO109I RGGNCCY 1 cut(s) 151
EcoRII CCWGG 6 cut(s) 301, 500, 547, 601, 751, 953
EcoT14I CCWWGG 2 cut(s) 380, 655
EcoT38I GRGCYC 3 cut(s) 195, 491, 933
ErhI CCWWGG 2 cut(s) 380, 655
FaeI CATG 6 cut(s) 384, 659, 771, 858, 885, 905
FaiI YATR 9 cut(s) 77, 282, 342, 382, 657, 769, 856, 883, 903
FaqI GGGAC 2 cut(s) 542, 778
FatI CATG 6 cut(s) 380, 655, 767, 854, 881, 901
FauI CCCGC 1 cut(s) 551
FbaI TGATCA 1 cut(s) 796
Fnu4HI GCNGC 7 cut(s) 17, 20, 81, 264, 345, 563, 786
FokI GGATG 5 cut(s) 231, 295, 385, 431, 564
FriOI GRGCYC 3 cut(s) 195, 491, 933
Fsp4HI GCNGC 7 cut(s) 17, 20, 81, 264, 345, 563, 786
FspBI CTAG 2 cut(s) 267, 321
GluI GCNGC 7 cut(s) 17, 20, 81, 264, 345, 563, 786
GsaI CCCAGC 1 cut(s) 329
HaeIII GGCC 2 cut(s) 176, 606
HapII CCGG 5 cut(s) 96, 177, 402, 607, 912
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 384, 659, 771, 858, 885, 905
HinfI GANTC 6 cut(s) 99, 643, 649, 748, 898, 908
HpaII CCGG 5 cut(s) 96, 177, 402, 607, 912
HphI GGTGA 1 cut(s) 838
Hpy166II GTNNAC 3 cut(s) 250, 467, 747
Hpy188I TCNGA 8 cut(s) 104, 354, 648, 796, 823, 835, 851, 919
Hpy188III TCNNGA 6 cut(s) 402, 620, 626, 738, 902, 912
Hpy8I GTNNAC 3 cut(s) 250, 467, 747
Hpy99I CGWCG 2 cut(s) 191, 200
HpyAV CCTTC 7 cut(s) 25, 57, 63, 325, 583, 591, 881
HpyCH4III ACNGT 3 cut(s) 187, 452, 537
HpyCH4IV ACGT 2 cut(s) 5, 206
HpyCH4V TGCA 5 cut(s) 222, 467, 785, 845, 858
HpyF10VI GCNNNNNNNGC 4 cut(s) 80, 130, 219, 785
HpyF3I CTNAG 2 cut(s) 101, 822
HpySE526I ACGT 2 cut(s) 5, 206
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 384, 659, 771, 858, 885, 905
Kpn2I TCCGGA 2 cut(s) 401, 911
KroI GCCGGC 1 cut(s) 606
KroNI GCCGGC 1 cut(s) 608
Ksp22I TGATCA 1 cut(s) 796
Kzo9I GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
LmnI GCTCC 1 cut(s) 129
Lsp1109I GCAGC 5 cut(s) 6, 250, 331, 574, 797
LweI GCATC 2 cut(s) 209, 338
MabI ACCWGGT 1 cut(s) 953
MaeI CTAG 2 cut(s) 267, 321
MaeII ACGT 2 cut(s) 5, 206
MaeIII GTNAC 3 cut(s) 167, 275, 472
MalI GATC 7 cut(s) 89, 256, 406, 624, 798, 853, 916
MboI GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
MboII GAAGA 9 cut(s) 82, 97, 327, 402, 414, 576, 681, 725, 917
MflI RGATCY 3 cut(s) 87, 404, 914
MhlI GDGCHC 5 cut(s) 195, 469, 491, 933, 947
MlyI GAGTC 2 cut(s) 93, 742
MmeI TCCRAC 3 cut(s) 161, 518, 695
MroI TCCGGA 2 cut(s) 401, 911
MroNI GCCGGC 1 cut(s) 606
MroXI GAANNNNTTC 1 cut(s) 89
MseI TTAA 2 cut(s) 120, 876
MslI CAYNNNNRTG 1 cut(s) 815
MspA1I CMGCKG 1 cut(s) 263
MspI CCGG 5 cut(s) 96, 177, 402, 607, 912
MspR9I CCNGG 6 cut(s) 303, 502, 549, 603, 753, 955
Mva1269I GAATGC 1 cut(s) 845
MvaI CCWGG 6 cut(s) 303, 502, 549, 603, 753, 955
MvnI CGCG 1 cut(s) 16
MwoI GCNNNNNNNGC 4 cut(s) 80, 130, 219, 785
NaeI GCCGGC 1 cut(s) 608
NcoI CCATGG 2 cut(s) 380, 655
NdeII GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
NgoMIV GCCGGC 1 cut(s) 606
NheI GCTAGC 1 cut(s) 266
NlaIII CATG 6 cut(s) 384, 659, 771, 858, 885, 905
NlaIV GGNNCC 2 cut(s) 202, 406
NmeAIII GCCGAG 1 cut(s) 48
NmuCI GTSAC 1 cut(s) 472
NspI RCATGY 1 cut(s) 771
PagI TCATGA 1 cut(s) 901
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 845
PdiI GCCGGC 1 cut(s) 608
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 4 cut(s) 643, 649, 898, 908
PflMI CCANNNNNTGG 2 cut(s) 302, 602
PfoI TCCNGGA 1 cut(s) 751
PkrI GCNGC 7 cut(s) 18, 21, 82, 265, 346, 564, 787
PleI GAGTC 2 cut(s) 93, 742
PpsI GAGTC 2 cut(s) 93, 742
Ppu21I YACGTR 1 cut(s) 207
PpuMI RGGWCCY 1 cut(s) 151
Psp124BI GAGCTC 3 cut(s) 195, 491, 933
Psp5II RGGWCCY 1 cut(s) 151
Psp6I CCWGG 6 cut(s) 301, 500, 547, 601, 751, 953
PspFI CCCAGC 1 cut(s) 325
PspGI CCWGG 6 cut(s) 301, 500, 547, 601, 751, 953
PspN4I GGNNCC 2 cut(s) 202, 406
PspPI GGNCC 3 cut(s) 151, 183, 659
PspPPI RGGWCCY 1 cut(s) 151
PstNI CAGNNNCTG 1 cut(s) 794
PsuI RGATCY 3 cut(s) 87, 404, 914
PvuII CAGCTG 1 cut(s) 263
RsaI GTAC 3 cut(s) 110, 209, 569
RsaNI GTAC 3 cut(s) 109, 208, 568
RseI CAYNNNNRTG 1 cut(s) 815
SacI GAGCTC 3 cut(s) 195, 491, 933
SaqAI TTAA 2 cut(s) 120, 876
SatI GCNGC 7 cut(s) 17, 20, 81, 264, 345, 563, 786
Sau3AI GATC 7 cut(s) 87, 254, 404, 622, 796, 851, 914
Sau96I GGNCC 3 cut(s) 151, 183, 659
ScaI AGTACT 1 cut(s) 569
SchI GAGTC 2 cut(s) 93, 742
ScrFI CCNGG 6 cut(s) 303, 502, 549, 603, 753, 955
SduI GDGCHC 5 cut(s) 195, 469, 491, 933, 947
SexAI ACCWGGT 1 cut(s) 953
SfaNI GCATC 2 cut(s) 209, 338
SfcI CTRYAG 1 cut(s) 75
SinI GGWCC 3 cut(s) 151, 183, 659
SmiMI CAYNNNNRTG 1 cut(s) 815
SsiI CCGC 5 cut(s) 16, 80, 211, 544, 806
SspI AATATT 1 cut(s) 439
SspMI CTAG 2 cut(s) 267, 321
SstI GAGCTC 3 cut(s) 195, 491, 933
StyD4I CCNGG 6 cut(s) 301, 500, 547, 601, 751, 953
StyI CCWWGG 2 cut(s) 380, 655
TaaI ACNGT 3 cut(s) 187, 452, 537
TaiI ACGT 2 cut(s) 8, 209
TaqI TCGA 3 cut(s) 189, 195, 739
TatI WGTACW 1 cut(s) 567
TauI GCSGC 2 cut(s) 19, 83
TfiI GAWTC 4 cut(s) 643, 649, 898, 908
Tru1I TTAA 2 cut(s) 120, 876
Tru9I TTAA 2 cut(s) 120, 876
TscAI CASTG 3 cut(s) 140, 469, 808
TseFI GTSAC 1 cut(s) 472
TseI GCWGC 5 cut(s) 19, 263, 344, 562, 785
Tsp45I GTSAC 1 cut(s) 472
TspDTI ATGAA 3 cut(s) 530, 890, 918
TspGWI ACGGA 2 cut(s) 267, 536
TspRI CASTG 3 cut(s) 140, 469, 808
Van91I CCANNNNNTGG 2 cut(s) 302, 602
VneI GTGCAC 1 cut(s) 465
VpaK11BI GGWCC 3 cut(s) 151, 183, 659
XceI RCATGY 1 cut(s) 771
XmnI GAANNNNTTC 1 cut(s) 89
XspI CTAG 2 cut(s) 267, 321
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.