Prupe.4G160200_v2.0.a1

isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
9174240 .. 9179399
5160 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G160200.1

Sequence Viewer

Length: 1407 bp
ATGAGAAATTCACTTTTCTTTCTCACTCTCCTAACACTCACTGTCGCTTACTCCCTCCAATTCCAAGCTCACGCTGCTCCTGCAGGACCATTAATAAAACACTTGTCTTCTCTTCTCAAGTGGACCAGGGAAATATCCTCCAAAACACCGCAATCAGTTGAGACTGTTTTGGAAGGTAATGACATTGGAGTAATTCCTTACCAAAATCCGCATCTCAGAGGATGGCGAACTCTTTGCCGTGACTCCGTTAACAGCAACATTATGCGGATTAGTGTTATGCAACAATACTTATATAGTAGGGGAAGATTGGTTGCTGGGTCATTTCAGGGTTACACAGGACATGTTGATGGAAAGCCAAGTGATGCTCGTTTCAATCATCCCAAAGGTGTAACTATGGATGATCAAGGGAATGTATATGTTGCTGATACCGTGAATCATGCCATAAGAAAGATTGGAGATGCTGGTGTGACAACCATTGCGGGCGGGAAATCAAATGTTGCAGGCTACAGGGATGGGCCCAGTGAAGATGCGATGTTCTCAAATGATTTTGATGTGGTATATATTCAATCTACTTGTTCCTTGCTAGTTGTTGATAGAGGAAATGCTGCTCTCCGGCAGATCTCTCTCAACCAGGAGGATTGTGATTATCAGTACAGTTCAATTTCTGCCACAGATGTGCTTATGGTTGTTGGTGCTGTCTTGGTAGGGTATGCTACATGCATGCTTCAGCAGGGATACGGACCTTCTTTCTTCTCGAGAACGCCACCTTTAAAGAGTGAAATTAAAGAGCATCCAAGCAATGGGAAATCTTCTCCAATGGTGGAGAGCATGAAAGAGGAACCAGGATGGCCATCTTTTGGACAGCTCATCATTGATCTATCCAAGCTTGGGCTTGAAGCATTGGCTGGCATATTTGTTCACTTCATCCCCTCCCGTTTTATGCCTGGTGGCTCCCAGAAAGGCCTCACACCATTAAAAGATGCTCTTAGGATGCCTGAAGATGAAGCTGAGACCCCATTAGTTCAGAGACAGAGTGCTCCTGCTCCTCTATCTGAGACTCGACAGGCCCATACACCCAATGCAAGTGAGAAATATTCAGAAATGAAGCCACCAAAGATGAAGTCAGCTAGTTTTAAAGATCCCTCTTTGTCAAGCAAGCACCGGTCTTCAAAGCGACAGGATTCTGCAGAATTCTATGGATCTGGTGAGGTTGCTTCTTATAGCAGGTCTAAGAGCCAGAAAGAAAGACCAAGGCACCGCCAACGAGATAAGAGTGGTGAGGTAGTTTTTGGAGCTGGGACAGAACCAAAACCCATGGATATGAAGGCAGCAGGTTATGACAATCCAAAGTTTGAAAATTACAATATCAGGAGCAGGTATGGACCTGATAGCTCGTATCGCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

469

Amino Acids

51.63

Weight (kDa)

8.98

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1215, 1322, 1365
AccB1I GGYRCC 1 cut(s) 1254
AccB7I CCANNNNNTGG 2 cut(s) 800, 857
AciI CCGC 6 cut(s) 149, 209, 265, 479, 483, 1258
AclWI GGATC 2 cut(s) 1133, 1207
AcoI YGGCCR 1 cut(s) 848
AcsI RAATTY 2 cut(s) 7, 1190
AcuI CTGAAG 2 cut(s) 710, 1017
AfaI GTAC 1 cut(s) 653
AfiI CCNNNNNNNGG 3 cut(s) 800, 857, 888
AflIII ACRYGT 1 cut(s) 340
AgeI ACCGGT 1 cut(s) 1161
AgsI TTSAA 6 cut(s) 373, 566, 660, 896, 1170, 1355
AjnI CCWGG 4 cut(s) 125, 630, 841, 943
AleI CACNNNNGTG 1 cut(s) 674
AluBI AGCT 7 cut(s) 68, 865, 886, 1007, 1127, 1295, 1392
AluI AGCT 7 cut(s) 68, 865, 886, 1007, 1127, 1295, 1392
Alw21I GWGCWC 1 cut(s) 1039
Alw26I GTCTC 4 cut(s) 155, 1004, 1021, 1049
AlwI GGATC 2 cut(s) 1133, 1207
Ama87I CYCGRG 1 cut(s) 754
AoxI GGCC 4 cut(s) 515, 848, 961, 1065
ApaI GGGCCC 1 cut(s) 519
ApeKI GCWGC 3 cut(s) 74, 605, 1328
ApoI RAATTY 2 cut(s) 7, 1190
ArsI GACNNNNNNTTYG 2 cut(s) 1106, 1138
AseI ATTAAT 1 cut(s) 92
AsiGI ACCGGT 1 cut(s) 1161
AspS9I GGNCC 7 cut(s) 86, 123, 515, 516, 740, 1066, 1382
AsuHPI GGTGA 2 cut(s) 1217, 1289
AvaI CYCGRG 1 cut(s) 754
AvaII GGWCC 4 cut(s) 86, 123, 740, 1382
BaeGI GKGCMC 1 cut(s) 519
BalI TGGCCA 1 cut(s) 850
BanI GGYRCC 1 cut(s) 1254
BanII GRGCYC 1 cut(s) 519
BbsI GAAGAC 2 cut(s) 99, 1158
Bbv12I GWGCWC 1 cut(s) 1039
BbvI GCAGC 3 cut(s) 61, 592, 1340
BccI CCATC 5 cut(s) 216, 341, 506, 840, 859
BceAI ACGGC 1 cut(s) 222
BcgI CGANNNNNNTGC 2 cut(s) 216, 250
BciT130I CCWGG 4 cut(s) 127, 632, 843, 945
BciVI GTATCC 1 cut(s) 728
BclI TGATCA 1 cut(s) 400
BcoDI GTCTC 4 cut(s) 155, 1004, 1021, 1049
BfaI CTAG 2 cut(s) 584, 1128
BfmI CTRYAG 3 cut(s) 81, 505, 1185
BfuAI ACCTGC 3 cut(s) 1215, 1322, 1365
BfuI GTATCC 1 cut(s) 728
BglII AGATCT 1 cut(s) 618
BisI GCNGC 3 cut(s) 75, 606, 1329
BlsI GCNGC 3 cut(s) 76, 607, 1330
Bme1390I CCNGG 4 cut(s) 127, 632, 843, 945
Bme18I GGWCC 4 cut(s) 86, 123, 740, 1382
BmeT110I CYCGRG 1 cut(s) 754
BmgT120I GGNCC 7 cut(s) 86, 123, 515, 516, 740, 1066, 1382
BmiI GGNNCC 4 cut(s) 517, 840, 952, 1256
BmrFI CCNGG 4 cut(s) 127, 632, 843, 945
BmrI ACTGGG 1 cut(s) 513
BmsI GCATC 7 cut(s) 220, 352, 448, 517, 799, 970, 981
BmuI ACTGGG 1 cut(s) 513
BpiI GAAGAC 2 cut(s) 99, 1158
BpuEI CTTGAG 1 cut(s) 101
BsaBI GATNNNNATC 1 cut(s) 850
BsaI GGTCTC 1 cut(s) 1004
BsaJI CCNNGG 3 cut(s) 126, 1250, 1314
BsaWI WCCGGW 1 cut(s) 1161
Bsc4I CCNNNNNNNGG 3 cut(s) 800, 857, 888
Bse118I RCCGGY 1 cut(s) 1161
Bse1I ACTGG 1 cut(s) 519
Bse3DI GCAATG 2 cut(s) 474, 805
Bse8I GATNNNNATC 1 cut(s) 850
BseBI CCWGG 4 cut(s) 127, 632, 843, 945
BseDI CCNNGG 3 cut(s) 126, 1250, 1314
BseGI GGATG 8 cut(s) 227, 376, 403, 517, 790, 851, 924, 996
BseJI GATNNNNATC 1 cut(s) 850
BseLI CCNNNNNNNGG 3 cut(s) 800, 857, 888
BseMI GCAATG 2 cut(s) 474, 805
BseMII CTCAG 3 cut(s) 229, 999, 1044
BseNI ACTGG 1 cut(s) 519
BseRI GAGGAG 1 cut(s) 1035
BseSI GKGCMC 1 cut(s) 519
BseXI GCAGC 3 cut(s) 61, 592, 1340
BseYI CCCAGC 2 cut(s) 314, 1295
BshFI GGCC 4 cut(s) 517, 850, 963, 1067
BshNI GGYRCC 1 cut(s) 1254
BshTI ACCGGT 1 cut(s) 1161
BsiHKAI GWGCWC 1 cut(s) 1039
BsiHKCI CYCGRG 1 cut(s) 754
BsiSI CCGG 2 cut(s) 613, 1162
BslFI GGGAC 1 cut(s) 1312
BslI CCNNNNNNNGG 3 cut(s) 800, 857, 888
BsmAI GTCTC 4 cut(s) 155, 1004, 1021, 1049
BsmFI GGGAC 1 cut(s) 1312
BsnI GGCC 4 cut(s) 517, 850, 963, 1067
Bso31I GGTCTC 1 cut(s) 1004
BsoBI CYCGRG 1 cut(s) 754
Bsp120I GGGCCC 1 cut(s) 515
Bsp1286I GDGCHC 2 cut(s) 519, 1039
Bsp143I GATC 5 cut(s) 400, 618, 874, 1138, 1199
Bsp19I CCATGG 1 cut(s) 1314
BspACI CCGC 6 cut(s) 149, 209, 265, 479, 483, 1258
BspANI GGCC 4 cut(s) 517, 850, 963, 1067
BspCNI CTCAG 3 cut(s) 228, 1000, 1045
BspLI GGNNCC 4 cut(s) 517, 840, 952, 1256
BspMAI CTGCAG 2 cut(s) 85, 1189
BspMI ACCTGC 3 cut(s) 1215, 1322, 1365
BspPI GGATC 2 cut(s) 1133, 1207
BspT107I GGYRCC 1 cut(s) 1254
BspTNI GGTCTC 1 cut(s) 1004
BsrDI GCAATG 2 cut(s) 474, 805
BsrFI RCCGGY 1 cut(s) 1161
BsrI ACTGG 1 cut(s) 519
BssAI RCCGGY 1 cut(s) 1161
BssECI CCNNGG 3 cut(s) 126, 1250, 1314
BssMI GATC 5 cut(s) 400, 618, 874, 1138, 1199
BssT1I CCWWGG 2 cut(s) 1250, 1314
Bst2UI CCWGG 4 cut(s) 127, 632, 843, 945
Bst4CI ACNGT 4 cut(s) 43, 166, 430, 656
Bst6I CTCTTC 1 cut(s) 117
BstC8I GCNNGC 5 cut(s) 481, 502, 722, 907, 1157
BstDEI CTNAG 5 cut(s) 215, 986, 1008, 1053, 1230
BstDSI CCRYGG 1 cut(s) 1314
BstF5I GGATG 8 cut(s) 227, 376, 403, 517, 790, 851, 924, 996
BstKTI GATC 5 cut(s) 403, 621, 877, 1141, 1202
BstMAI GTCTC 4 cut(s) 155, 1004, 1021, 1049
BstMBI GATC 5 cut(s) 400, 618, 874, 1138, 1199
BstMWI GCNNNNNNNGC 3 cut(s) 74, 80, 1398
BstNI CCWGG 4 cut(s) 127, 632, 843, 945
BstNSI RCATGY 3 cut(s) 344, 720, 724
BstSCI CCNGG 4 cut(s) 125, 630, 841, 943
BstSFI CTRYAG 3 cut(s) 81, 505, 1185
BstSLI GKGCMC 1 cut(s) 519
BstV1I GCAGC 3 cut(s) 61, 592, 1340
BstV2I GAAGAC 2 cut(s) 99, 1158
BstX2I RGATCY 3 cut(s) 618, 1138, 1199
BstYI RGATCY 3 cut(s) 618, 1138, 1199
BsuI GTATCC 1 cut(s) 728
BsuRI GGCC 4 cut(s) 517, 850, 963, 1067
BtgI CCRYGG 1 cut(s) 1314
BtgZI GCGATG 1 cut(s) 545
BtsCI GGATG 8 cut(s) 227, 376, 403, 517, 790, 851, 924, 996
BtsIMutI CAGTG 2 cut(s) 39, 526
BveI ACCTGC 3 cut(s) 1215, 1322, 1365
Cac8I GCNNGC 5 cut(s) 481, 502, 722, 907, 1157
Cfr10I RCCGGY 1 cut(s) 1161
Cfr13I GGNCC 7 cut(s) 86, 123, 515, 516, 740, 1066, 1382
Csp6I GTAC 1 cut(s) 652
CspAI ACCGGT 1 cut(s) 1161
CviAII CATG 6 cut(s) 341, 437, 717, 721, 829, 1315
CviQI GTAC 1 cut(s) 652
DdeI CTNAG 5 cut(s) 215, 986, 1008, 1053, 1230
DpnI GATC 5 cut(s) 402, 620, 876, 1140, 1201
DpnII GATC 5 cut(s) 400, 618, 874, 1138, 1199
DraI TTTAAA 2 cut(s) 771, 1135
EaeI YGGCCR 1 cut(s) 848
Eam1104I CTCTTC 1 cut(s) 117
EarI CTCTTC 1 cut(s) 117
Eco130I CCWWGG 2 cut(s) 1250, 1314
Eco147I AGGCCT 1 cut(s) 963
Eco24I GRGCYC 1 cut(s) 519
Eco31I GGTCTC 1 cut(s) 1004
Eco47I GGWCC 4 cut(s) 86, 123, 740, 1382
Eco57I CTGAAG 2 cut(s) 710, 1017
Eco88I CYCGRG 1 cut(s) 754
EcoRI GAATTC 1 cut(s) 1190
EcoRII CCWGG 4 cut(s) 125, 630, 841, 943
EcoT14I CCWWGG 2 cut(s) 1250, 1314
EcoT22I ATGCAT 1 cut(s) 722
EcoT38I GRGCYC 1 cut(s) 519
ErhI CCWWGG 2 cut(s) 1250, 1314
FaeI CATG 6 cut(s) 344, 440, 720, 724, 832, 1318
FalI AAGNNNNNCTT 2 cut(s) 969, 1001
FaqI GGGAC 1 cut(s) 1312
FatI CATG 6 cut(s) 340, 436, 716, 720, 828, 1314
FauI CCCGC 2 cut(s) 472, 476
FbaI TGATCA 1 cut(s) 400
Fnu4HI GCNGC 3 cut(s) 75, 606, 1329
FokI GGATG 8 cut(s) 234, 363, 410, 524, 777, 858, 911, 1003
FriOI GRGCYC 1 cut(s) 519
Fsp4HI GCNGC 3 cut(s) 75, 606, 1329
FspBI CTAG 2 cut(s) 584, 1128
GluI GCNGC 3 cut(s) 75, 606, 1329
GsaI CCCAGC 2 cut(s) 318, 1299
HaeIII GGCC 4 cut(s) 517, 850, 963, 1067
HapII CCGG 2 cut(s) 613, 1162
Hin1II CATG 6 cut(s) 344, 440, 720, 724, 832, 1318
HincII GTYRAC 1 cut(s) 250
HindII GTYRAC 1 cut(s) 250
HindIII AAGCTT 1 cut(s) 884
HinfI GANTC 4 cut(s) 242, 433, 1057, 1181
HpaI GTTAAC 1 cut(s) 250
HpaII CCGG 2 cut(s) 613, 1162
HphI GGTGA 2 cut(s) 1217, 1289
Hpy166II GTNNAC 3 cut(s) 123, 250, 919
Hpy188I TCNGA 4 cut(s) 218, 1026, 1054, 1099
Hpy188III TCNNGA 3 cut(s) 754, 756, 1369
Hpy8I GTNNAC 3 cut(s) 123, 250, 919
HpyAV CCTTC 3 cut(s) 167, 753, 1318
HpyCH4III ACNGT 4 cut(s) 43, 166, 430, 656
HpyCH4V TGCA 6 cut(s) 83, 280, 500, 720, 1082, 1187
HpyF10VI GCNNNNNNNGC 3 cut(s) 74, 80, 1398
HpyF3I CTNAG 5 cut(s) 215, 986, 1008, 1053, 1230
Hsp92II CATG 6 cut(s) 344, 440, 720, 724, 832, 1318
Ksp22I TGATCA 1 cut(s) 400
KspAI GTTAAC 1 cut(s) 250
Kzo9I GATC 5 cut(s) 400, 618, 874, 1138, 1199
LmnI GCTCC 6 cut(s) 82, 956, 1042, 1048, 1292, 1371
Lsp1109I GCAGC 3 cut(s) 61, 592, 1340
LweI GCATC 7 cut(s) 220, 352, 448, 517, 799, 970, 981
MaeI CTAG 2 cut(s) 584, 1128
MaeIII GTNAC 4 cut(s) 239, 329, 388, 466
MalI GATC 5 cut(s) 402, 620, 876, 1140, 1201
MboI GATC 5 cut(s) 400, 618, 874, 1138, 1199
MboII GAAGA 8 cut(s) 99, 104, 315, 536, 742, 801, 1010, 1158
MflI RGATCY 3 cut(s) 618, 1138, 1199
MhlI GDGCHC 2 cut(s) 519, 1039
MlsI TGGCCA 1 cut(s) 850
MluCI AATT 7 cut(s) 7, 59, 192, 660, 780, 1190, 1357
MluNI TGGCCA 1 cut(s) 850
MlyI GAGTC 2 cut(s) 236, 1051
Mox20I TGGCCA 1 cut(s) 850
Mph1103I ATGCAT 1 cut(s) 722
MscI TGGCCA 1 cut(s) 850
MseI TTAA 6 cut(s) 92, 249, 770, 783, 974, 1134
MslI CAYNNNNRTG 3 cut(s) 345, 674, 1319
Msp20I TGGCCA 1 cut(s) 850
MspI CCGG 2 cut(s) 613, 1162
MspR9I CCNGG 4 cut(s) 127, 632, 843, 945
MvaI CCWGG 4 cut(s) 127, 632, 843, 945
MwoI GCNNNNNNNGC 3 cut(s) 74, 80, 1398
NcoI CCATGG 1 cut(s) 1314
NdeII GATC 5 cut(s) 400, 618, 874, 1138, 1199
NlaIII CATG 6 cut(s) 344, 440, 720, 724, 832, 1318
NlaIV GGNNCC 4 cut(s) 517, 840, 952, 1256
NmuCI GTSAC 2 cut(s) 239, 466
NsiI ATGCAT 1 cut(s) 722
NspI RCATGY 3 cut(s) 344, 720, 724
OliI CACNNNNGTG 1 cut(s) 674
PaeI GCATGC 1 cut(s) 724
PaeR7I CTCGAG 1 cut(s) 754
PceI AGGCCT 1 cut(s) 963
PciI ACATGT 1 cut(s) 340
PfeI GAWTC 2 cut(s) 433, 1181
PflMI CCANNNNNTGG 2 cut(s) 800, 857
PinAI ACCGGT 1 cut(s) 1161
PkrI GCNGC 3 cut(s) 76, 607, 1330
PleI GAGTC 2 cut(s) 236, 1051
PpsI GAGTC 2 cut(s) 236, 1051
PscI ACATGT 1 cut(s) 340
PshBI ATTAAT 1 cut(s) 92
Psp6I CCWGG 4 cut(s) 125, 630, 841, 943
PspFI CCCAGC 2 cut(s) 314, 1295
PspGI CCWGG 4 cut(s) 125, 630, 841, 943
PspN4I GGNNCC 4 cut(s) 517, 840, 952, 1256
PspOMI GGGCCC 1 cut(s) 515
PspPI GGNCC 7 cut(s) 86, 123, 515, 516, 740, 1066, 1382
PstI CTGCAG 2 cut(s) 85, 1189
PsuI RGATCY 3 cut(s) 618, 1138, 1199
RsaI GTAC 1 cut(s) 653
RsaNI GTAC 1 cut(s) 652
RseI CAYNNNNRTG 3 cut(s) 345, 674, 1319
SaqAI TTAA 6 cut(s) 92, 249, 770, 783, 974, 1134
SatI GCNGC 3 cut(s) 75, 606, 1329
Sau3AI GATC 5 cut(s) 400, 618, 874, 1138, 1199
Sau96I GGNCC 7 cut(s) 86, 123, 515, 516, 740, 1066, 1382
SbfI CCTGCAGG 1 cut(s) 85
SchI GAGTC 2 cut(s) 236, 1051
ScrFI CCNGG 4 cut(s) 127, 632, 843, 945
SdaI CCTGCAGG 1 cut(s) 85
SduI GDGCHC 2 cut(s) 519, 1039
SfaNI GCATC 7 cut(s) 220, 352, 448, 517, 799, 970, 981
SfcI CTRYAG 3 cut(s) 81, 505, 1185
Sfr274I CTCGAG 1 cut(s) 754
SinI GGWCC 4 cut(s) 86, 123, 740, 1382
SlaI CTCGAG 1 cut(s) 754
SmiMI CAYNNNNRTG 3 cut(s) 345, 674, 1319
SmlI CTYRAG 2 cut(s) 116, 754
SmoI CTYRAG 2 cut(s) 116, 754
SphI GCATGC 1 cut(s) 724
Sse8387I CCTGCAGG 1 cut(s) 85
Sse9I AATT 7 cut(s) 7, 59, 192, 660, 780, 1190, 1357
SseBI AGGCCT 1 cut(s) 963
SsiI CCGC 6 cut(s) 149, 209, 265, 479, 483, 1258
SspI AATATT 1 cut(s) 1094
SspMI CTAG 2 cut(s) 584, 1128
StuI AGGCCT 1 cut(s) 963
StyD4I CCNGG 4 cut(s) 125, 630, 841, 943
StyI CCWWGG 2 cut(s) 1250, 1314
TaaI ACNGT 4 cut(s) 43, 166, 430, 656
TaqI TCGA 2 cut(s) 755, 1060
TasI AATT 7 cut(s) 7, 59, 192, 660, 780, 1190, 1357
TatI WGTACW 1 cut(s) 651
TfiI GAWTC 2 cut(s) 433, 1181
Tru1I TTAA 6 cut(s) 92, 249, 770, 783, 974, 1134
Tru9I TTAA 6 cut(s) 92, 249, 770, 783, 974, 1134
TscAI CASTG 2 cut(s) 46, 526
TseFI GTSAC 2 cut(s) 239, 466
TseI GCWGC 3 cut(s) 74, 605, 1328
Tsp45I GTSAC 2 cut(s) 239, 466
TspDTI ATGAA 6 cut(s) 845, 913, 1017, 1118, 1133, 1337
TspGWI ACGGA 2 cut(s) 235, 753
TspRI CASTG 2 cut(s) 46, 526
Van91I CCANNNNNTGG 2 cut(s) 800, 857
VpaK11BI GGWCC 4 cut(s) 86, 123, 740, 1382
VspI ATTAAT 1 cut(s) 92
XapI RAATTY 2 cut(s) 7, 1190
XceI RCATGY 3 cut(s) 344, 720, 724
XhoI CTCGAG 1 cut(s) 754
XspI CTAG 2 cut(s) 584, 1128
Zsp2I ATGCAT 1 cut(s) 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.