Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0015705

Physical Location & Seq

Genomic Coordinates Reverse (-)

10186976 .. 10189910

Gene Structure 2935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G172000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGGCTCAATTACCACCTAAAATACCAAGCATGGCACAAAATTGGGCATCCTTCCCTCACCAAAGGCTACCCACCACGGCCAATTTCATCCCCACCACCACTACTTCTGCCGCGGTCCAGCCACCTTCGCAACCGCAATGTAACTGGATCGACGAGTTCCTCGATTTCTCCTCCGCCAGGCGTGGGGTCCACCGGAGGTCCGCGAGCGATTCCATAGCCTTCATGGAGTCCCCGTTGACATTGGAAGAAGAATGCAGGAACCCGAGCACCGCCATGATGCATCATGGATCCACCAACAACCTCTGCTTCGACAGGCTGGACGACGAGCAGCTCATGTCCATGTTCTCCGACGACATGTCCGTCACCGTCCCTCCTACCGTGTCGTCTTCGAACCCGTCCACGCCGTCCGACCAGAACAGCAATAACGACGAGAATAATAACAACAACAATAGCAACAAGCTATTGATGGCTCATCAGGAGCAGCAGCATCAGCAGCACCCGAAAAGCGAGCCGGGAGAGGACGAAAGCTCATGCGAGGCAGACCCTCATGCTCAATCTCATCCGCCACCGCCAACCTCCCCAGCTGATCCCAAGAGGGTCAAAAGCAGAATTTTGGCGAACCGGCAATCGGCTCAACGGTCTAGGGTCAGAAAGTTGCAATACATTTCAGAGCTTGAACGCAGCGTTACAACATTACAGTCGGAGGTATCAGCACTGTCTCCAAGGGTGGCATTTCTAGACCACCAGAGGTTGATTCTGAATGTGGATAATAGTGCTTTGAAGCAAAGGATTGCTGCTTTGGCTCAAGATAAGCTTTTCAAAGACGCTCATCAAGAGGCACTAAAGAATGAAATAGAGAGGTTAAGGCAGGTTTATCACCACCAAAGCCTAAAGAAGATGGGAAACCAAAACGCACAGCAGCAGCAGCATCAGCAACAGCAGCAACCAAACCCAGATATCATGGTGTGTACGGATCACAATGAGCAGCAAATTCTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

334

Amino Acids

37.61

Weight (kDa)

6.09

Isoelectric Point (pI)

69.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015705)

Species	Orthologous Gene IDs
malus_domestica	MD03G1237600.v1.1 MD11G1258200.v1.1
prunus_persica	Prupe.4G172000_v2.0.a1 Prupe.4G172000_v2.0.a1
pyrus_communis	pycom03g18330 pycom11g22760
rosa_chinensis	RchiOBHm_Chr5g0031811
rosa_laevigata	RLG00000033348
rosa_multiflora	Rmu_sc0006847.1_g000027
rosa_roxburghii	Rroxscaffold_1G00048460
rosa_rugosa	Rorug05G0127700
rosa_samantha	Rh5AG222000 Rh5BG222000 Rh5CG245300 Rh5DG226900
rosa_wichuraiana	Rw5G020240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	359
Acc36I	ACCTGC	1 cut(s)	859
AccII	CGCG	2 cut(s)	113, 203
AciI	CCGC	8 cut(s)	111, 113, 134, 174, 201, 270, 563, 569
AclWI	GGATC	5 cut(s)	155, 282, 295, 581, 981
AcoI	YGGCCR	1 cut(s)	78
AcsI	RAATTY	2 cut(s)	609, 990
AfaI	GTAC	1 cut(s)	970
AfiI	CCNNNNNNNGG	3 cut(s)	177, 183, 628
AflIII	ACRYGT	1 cut(s)	354
AgsI	TTSAA	3 cut(s)	677, 781, 820
AhdI	GACNNNNNGTC	1 cut(s)	355
AjnI	CCWGG	1 cut(s)	176
AluBI	AGCT	6 cut(s)	331, 460, 528, 584, 673, 814
AluI	AGCT	6 cut(s)	331, 460, 528, 584, 673, 814
Alw21I	GWGCWC	1 cut(s)	269
Alw26I	GTCTC	1 cut(s)	723
AlwI	GGATC	5 cut(s)	155, 282, 295, 581, 981
Ama87I	CYCGRG	1 cut(s)	262
AoxI	GGCC	1 cut(s)	78
ApoI	RAATTY	2 cut(s)	609, 990
AspS9I	GGNCC	3 cut(s)	115, 187, 198
AsuC2I	CCSGG	1 cut(s)	513
AsuHPI	GGTGA	3 cut(s)	50, 355, 869
AsuII	TTCGAA	1 cut(s)	389
AvaI	CYCGRG	1 cut(s)	262
AvaII	GGWCC	3 cut(s)	115, 187, 198
BamHI	GGATCC	1 cut(s)	287
BbsI	GAAGAC	1 cut(s)	378
Bbv12I	GWGCWC	1 cut(s)	269
BccI	CCATC	2 cut(s)	460, 892
BceAI	ACGGC	2 cut(s)	93, 388
BciT130I	CCWGG	1 cut(s)	178
BcnI	CCSGG	1 cut(s)	513
BcoDI	GTCTC	1 cut(s)	723
BfaI	CTAG	2 cut(s)	642, 737
BfuAI	ACCTGC	1 cut(s)	859
Bme1390I	CCNGG	2 cut(s)	178, 513
Bme18I	GGWCC	3 cut(s)	115, 187, 198
BmeRI	GACNNNNNGTC	1 cut(s)	355
BmeT110I	CYCGRG	1 cut(s)	262
BmgT120I	GGNCC	3 cut(s)	115, 187, 198
BmiI	GGNNCC	3 cut(s)	188, 260, 289
BmrFI	CCNGG	2 cut(s)	178, 513
BmsI	GCATC	5 cut(s)	56, 267, 289, 496, 937
BpiI	GAAGAC	1 cut(s)	378
Bpu14I	TTCGAA	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	789
BpuMI	CCSGG	1 cut(s)	513
BsaJI	CCNNGG	3 cut(s)	75, 111, 722
BsaWI	WCCGGW	1 cut(s)	192
BsaXI	ACNNNNNCTCC	4 cut(s)	218, 248, 355, 385
Bsc4I	CCNNNNNNNGG	3 cut(s)	177, 183, 628
Bse118I	RCCGGY	1 cut(s)	621
Bse1I	ACTGG	1 cut(s)	149
Bse3DI	GCAATG	1 cut(s)	143
BseBI	CCWGG	1 cut(s)	178
BseDI	CCNNGG	3 cut(s)	75, 111, 722
BseGI	GGATG	3 cut(s)	47, 87, 559
BseLI	CCNNNNNNNGG	3 cut(s)	177, 183, 628
BseMI	GCAATG	1 cut(s)	143
BseNI	ACTGG	1 cut(s)	149
BseRI	GAGGAG	1 cut(s)	160
BseYI	CCCAGC	1 cut(s)	580
Bsh1236I	CGCG	2 cut(s)	113, 203
BshFI	GGCC	1 cut(s)	80
BsiHKAI	GWGCWC	1 cut(s)	269
BsiHKCI	CYCGRG	1 cut(s)	262
BsiSI	CCGG	3 cut(s)	193, 512, 622
BslFI	GGGAC	2 cut(s)	214, 353
BslI	CCNNNNNNNGG	3 cut(s)	177, 183, 628
BsmAI	GTCTC	1 cut(s)	723
BsmFI	GGGAC	2 cut(s)	214, 353
BsmI	GAATGC	1 cut(s)	257
BsnI	GGCC	1 cut(s)	80
BsoBI	CYCGRG	1 cut(s)	262
Bsp119I	TTCGAA	1 cut(s)	389
Bsp1286I	GDGCHC	1 cut(s)	269
Bsp143I	GATC	4 cut(s)	147, 287, 586, 973
BspACI	CCGC	8 cut(s)	111, 113, 134, 174, 201, 270, 563, 569
BspANI	GGCC	1 cut(s)	80
BspFNI	CGCG	2 cut(s)	113, 203
BspLI	GGNNCC	3 cut(s)	188, 260, 289
BspMI	ACCTGC	1 cut(s)	859
BspPI	GGATC	5 cut(s)	155, 282, 295, 581, 981
BspT104I	TTCGAA	1 cut(s)	389
BsrDI	GCAATG	1 cut(s)	143
BsrFI	RCCGGY	1 cut(s)	621
BsrI	ACTGG	1 cut(s)	149
BssAI	RCCGGY	1 cut(s)	621
BssECI	CCNNGG	3 cut(s)	75, 111, 722
BssMI	GATC	4 cut(s)	147, 287, 586, 973
BssT1I	CCWWGG	1 cut(s)	722
Bst2UI	CCWGG	1 cut(s)	178
Bst4CI	ACNGT	5 cut(s)	367, 379, 639, 699, 717
BstBI	TTCGAA	1 cut(s)	389
BstC8I	GCNNGC	2 cut(s)	205, 509
BstDSI	CCRYGG	2 cut(s)	75, 111
BstENI	CCTNNNNNAGG	1 cut(s)	175
BstF5I	GGATG	3 cut(s)	47, 87, 559
BstFNI	CGCG	2 cut(s)	113, 203
BstKTI	GATC	4 cut(s)	150, 290, 589, 976
BstMAI	GTCTC	1 cut(s)	723
BstMBI	GATC	4 cut(s)	147, 287, 586, 973
BstMWI	GCNNNNNNNGC	7 cut(s)	127, 490, 493, 800, 925, 931, 940
BstNI	CCWGG	1 cut(s)	178
BstNSI	RCATGY	1 cut(s)	358
BstSCI	CCNGG	2 cut(s)	176, 511
BstUI	CGCG	2 cut(s)	113, 203
BstV2I	GAAGAC	1 cut(s)	378
BstX2I	RGATCY	1 cut(s)	287
BstYI	RGATCY	1 cut(s)	287
BsuRI	GGCC	1 cut(s)	80
BtgI	CCRYGG	2 cut(s)	75, 111
BtsCI	GGATG	3 cut(s)	47, 87, 559
BtsIMutI	CAGTG	1 cut(s)	713
BveI	ACCTGC	1 cut(s)	859
Cac8I	GCNNGC	2 cut(s)	205, 509
Cfr10I	RCCGGY	1 cut(s)	621
Cfr13I	GGNCC	3 cut(s)	115, 187, 198
Cfr42I	CCGCGG	1 cut(s)	114
CseI	GACGC	1 cut(s)	833
Csp6I	GTAC	1 cut(s)	969
CviQI	GTAC	1 cut(s)	969
DpnI	GATC	4 cut(s)	149, 289, 588, 975
DpnII	GATC	4 cut(s)	147, 287, 586, 973
DrdI	GACNNNNNNGTC	1 cut(s)	359
DriI	GACNNNNNGTC	1 cut(s)	355
DseDI	GACNNNNNNGTC	1 cut(s)	359
EaeI	YGGCCR	1 cut(s)	78
Eam1105I	GACNNNNNGTC	1 cut(s)	355
EciI	GGCGGA	2 cut(s)	163, 552
Eco130I	CCWWGG	1 cut(s)	722
Eco32I	GATATC	1 cut(s)	958
Eco47I	GGWCC	3 cut(s)	115, 187, 198
Eco88I	CYCGRG	1 cut(s)	262
EcoNI	CCTNNNNNAGG	1 cut(s)	175
EcoRII	CCWGG	1 cut(s)	176
EcoRV	GATATC	1 cut(s)	958
EcoT14I	CCWWGG	1 cut(s)	722
EcoT22I	ATGCAT	1 cut(s)	282
ErhI	CCWWGG	1 cut(s)	722
FalI	AAGNNNNNCTT	2 cut(s)	798, 830
FaqI	GGGAC	2 cut(s)	214, 353
FokI	GGATG	3 cut(s)	34, 74, 546
FspBI	CTAG	2 cut(s)	642, 737
GsaI	CCCAGC	1 cut(s)	584
HaeIII	GGCC	1 cut(s)	80
HapII	CCGG	3 cut(s)	193, 512, 622
HgaI	GACGC	1 cut(s)	833
HincII	GTYRAC	1 cut(s)	237
HindII	GTYRAC	1 cut(s)	237
HindIII	AAGCTT	1 cut(s)	812
HinfI	GANTC	3 cut(s)	209, 227, 754
HpaII	CCGG	3 cut(s)	193, 512, 622
HphI	GGTGA	3 cut(s)	50, 355, 869
Hpy166II	GTNNAC	4 cut(s)	190, 237, 399, 969
Hpy188I	TCNGA	7 cut(s)	349, 409, 650, 670, 703, 759, 996
Hpy188III	TCNNGA	4 cut(s)	476, 737, 806, 833
Hpy8I	GTNNAC	4 cut(s)	190, 237, 399, 969
Hpy99I	CGWCG	4 cut(s)	155, 326, 353, 431
HpyAV	CCTTC	3 cut(s)	61, 135, 229
HpyCH4III	ACNGT	5 cut(s)	367, 379, 639, 699, 717
HpyCH4V	TGCA	3 cut(s)	255, 280, 658
HpyF10VI	GCNNNNNNNGC	7 cut(s)	127, 490, 493, 800, 925, 931, 940
KspI	CCGCGG	1 cut(s)	114
Kzo9I	GATC	4 cut(s)	147, 287, 586, 973
LmnI	GCTCC	1 cut(s)	478
LweI	GCATC	5 cut(s)	56, 267, 289, 496, 937
MaeI	CTAG	2 cut(s)	642, 737
MaeIII	GTNAC	3 cut(s)	140, 361, 685
MalI	GATC	4 cut(s)	149, 289, 588, 975
MboI	GATC	4 cut(s)	147, 287, 586, 973
MboII	GAAGA	4 cut(s)	257, 260, 378, 907
MflI	RGATCY	1 cut(s)	287
MhlI	GDGCHC	1 cut(s)	269
MluCI	AATT	6 cut(s)	8, 40, 82, 609, 990, 997
MlyI	GAGTC	1 cut(s)	236
MmeI	TCCRAC	3 cut(s)	372, 432, 681
Mph1103I	ATGCAT	1 cut(s)	282
MseI	TTAA	1 cut(s)	863
MslI	CAYNNNNRTG	2 cut(s)	272, 338
MspA1I	CMGCKG	2 cut(s)	113, 584
MspI	CCGG	3 cut(s)	193, 512, 622
MspR9I	CCNGG	2 cut(s)	178, 513
Mva1269I	GAATGC	1 cut(s)	257
MvaI	CCWGG	1 cut(s)	178
MvnI	CGCG	2 cut(s)	113, 203
MwoI	GCNNNNNNNGC	7 cut(s)	127, 490, 493, 800, 925, 931, 940
NciI	CCSGG	1 cut(s)	513
NdeII	GATC	4 cut(s)	147, 287, 586, 973
NlaIV	GGNNCC	3 cut(s)	188, 260, 289
NmuCI	GTSAC	1 cut(s)	361
NsiI	ATGCAT	1 cut(s)	282
NspI	RCATGY	1 cut(s)	358
NspV	TTCGAA	1 cut(s)	389
PciI	ACATGT	1 cut(s)	354
PcsI	WCGNNNNNNNCGW	2 cut(s)	159, 357
PctI	GAATGC	1 cut(s)	257
PfeI	GAWTC	2 cut(s)	209, 754
PleI	GAGTC	1 cut(s)	235
PpsI	GAGTC	1 cut(s)	235
PscI	ACATGT	1 cut(s)	354
Psp6I	CCWGG	1 cut(s)	176
PspFI	CCCAGC	1 cut(s)	580
PspGI	CCWGG	1 cut(s)	176
PspN4I	GGNNCC	3 cut(s)	188, 260, 289
PspPI	GGNCC	3 cut(s)	115, 187, 198
PsuI	RGATCY	1 cut(s)	287
PvuII	CAGCTG	1 cut(s)	584
RsaI	GTAC	1 cut(s)	970
RsaNI	GTAC	1 cut(s)	969
RseI	CAYNNNNRTG	2 cut(s)	272, 338
SacII	CCGCGG	1 cut(s)	114
SaqAI	TTAA	1 cut(s)	863
Sau3AI	GATC	4 cut(s)	147, 287, 586, 973
Sau96I	GGNCC	3 cut(s)	115, 187, 198
SchI	GAGTC	1 cut(s)	236
ScrFI	CCNGG	2 cut(s)	178, 513
SduI	GDGCHC	1 cut(s)	269
SfaNI	GCATC	5 cut(s)	56, 267, 289, 496, 937
Sfr303I	CCGCGG	1 cut(s)	114
SfuI	TTCGAA	1 cut(s)	389
SgrBI	CCGCGG	1 cut(s)	114
SinI	GGWCC	3 cut(s)	115, 187, 198
SmiMI	CAYNNNNRTG	2 cut(s)	272, 338
SmlI	CTYRAG	1 cut(s)	804
SmoI	CTYRAG	1 cut(s)	804
Sse9I	AATT	6 cut(s)	8, 40, 82, 609, 990, 997
SsiI	CCGC	8 cut(s)	111, 113, 134, 174, 201, 270, 563, 569
SspMI	CTAG	2 cut(s)	642, 737
StyD4I	CCNGG	2 cut(s)	176, 511
StyI	CCWWGG	1 cut(s)	722
TaaI	ACNGT	5 cut(s)	367, 379, 639, 699, 717
TaqI	TCGA	4 cut(s)	150, 162, 309, 389
TasI	AATT	6 cut(s)	8, 40, 82, 609, 990, 997
TauI	GCSGC	1 cut(s)	113
TfiI	GAWTC	2 cut(s)	209, 754
Tru1I	TTAA	1 cut(s)	863
Tru9I	TTAA	1 cut(s)	863
TscAI	CASTG	1 cut(s)	720
TseFI	GTSAC	1 cut(s)	361
Tsp45I	GTSAC	1 cut(s)	361
TspDTI	ATGAA	3 cut(s)	76, 211, 864
TspGWI	ACGGA	2 cut(s)	349, 986
TspRI	CASTG	1 cut(s)	720
VpaK11BI	GGWCC	3 cut(s)	115, 187, 198
XagI	CCTNNNNNAGG	1 cut(s)	175
XapI	RAATTY	2 cut(s)	609, 990
XbaI	TCTAGA	1 cut(s)	736
XceI	RCATGY	1 cut(s)	358
XcmI	CCANNNNNNNNNTGG	1 cut(s)	220
XspI	CTAG	2 cut(s)	642, 737
Zsp2I	ATGCAT	1 cut(s)	282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.