RNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53800 |
| fragaria_vesca | FvH4_3g20100 |
| malus_domestica | MD03G1225800.v1.1 MD11G1245300.v1.1 MD11G1245600.v1.1 |
| prunus_persica | Prupe.4G183600_v2.0.a1 |
| pyrus_communis | pycom03g17360 pycom11g21750 |
| rosa_chinensis | RchiOBHm_Chr5g0033901 |
| rosa_laevigata | RLG00000033509 |
| rosa_multiflora | Rmu_co8447119.1_g000001 Rmu_sc0001150.1_g000015 Rmu_sc0022678.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00046310 |
| rosa_rugosa | Rorug05G0143100 |
| rosa_samantha | Rh5AG234000 Rh5BG234600 Rh5DG241500 |
| rosa_wichuraiana | Rw5G021530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 747 |
| AccBSI | CCGCTC | 1 cut(s) | 279 |
| AccII | CGCG | 2 cut(s) | 186, 217 |
| AciI | CCGC | 3 cut(s) | 217, 223, 279 |
| AclWI | GGATC | 1 cut(s) | 533 |
| AcuI | CTGAAG | 1 cut(s) | 875 |
| AcyI | GRCGYC | 1 cut(s) | 293 |
| AfaI | GTAC | 2 cut(s) | 227, 772 |
| AfeI | AGCGCT | 1 cut(s) | 860 |
| AflIII | ACRYGT | 1 cut(s) | 184 |
| AgsI | TTSAA | 3 cut(s) | 29, 640, 781 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 259 |
| AjnI | CCWGG | 1 cut(s) | 600 |
| AluBI | AGCT | 6 cut(s) | 48, 162, 497, 668, 851, 902 |
| AluI | AGCT | 6 cut(s) | 48, 162, 497, 668, 851, 902 |
| AlwI | GGATC | 1 cut(s) | 533 |
| Aor51HI | AGCGCT | 1 cut(s) | 860 |
| ApeKI | GCWGC | 5 cut(s) | 21, 953, 956, 959, 989 |
| AspLEI | GCGC | 1 cut(s) | 861 |
| AsuHPI | GGTGA | 1 cut(s) | 607 |
| BbvI | GCAGC | 5 cut(s) | 33, 940, 943, 946, 976 |
| BccI | CCATC | 1 cut(s) | 913 |
| BceAI | ACGGC | 1 cut(s) | 815 |
| BciT130I | CCWGG | 1 cut(s) | 602 |
| BfoI | RGCGCY | 1 cut(s) | 862 |
| BisI | GCNGC | 6 cut(s) | 22, 280, 954, 957, 960, 990 |
| BlsI | GCNGC | 6 cut(s) | 23, 281, 955, 958, 961, 991 |
| Bme1390I | CCNGG | 1 cut(s) | 602 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 259 |
| BmrFI | CCNGG | 1 cut(s) | 602 |
| BmrI | ACTGGG | 1 cut(s) | 103 |
| BmsI | GCATC | 3 cut(s) | 691, 801, 976 |
| BmuI | ACTGGG | 1 cut(s) | 103 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 266, 298 |
| BsaHI | GRCGYC | 1 cut(s) | 293 |
| Bse1I | ACTGG | 3 cut(s) | 109, 882, 928 |
| Bse3DI | GCAATG | 1 cut(s) | 894 |
| BseBI | CCWGG | 1 cut(s) | 602 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseMI | GCAATG | 1 cut(s) | 894 |
| BseMII | CTCAG | 2 cut(s) | 63, 922 |
| BseNI | ACTGG | 3 cut(s) | 109, 882, 928 |
| BseRI | GAGGAG | 6 cut(s) | 205, 223, 287, 349, 364, 400 |
| BseXI | GCAGC | 5 cut(s) | 33, 940, 943, 946, 976 |
| Bsh1236I | CGCG | 2 cut(s) | 186, 217 |
| Bsp143I | GATC | 4 cut(s) | 10, 212, 525, 655 |
| BspACI | CCGC | 3 cut(s) | 217, 223, 279 |
| BspCNI | CTCAG | 2 cut(s) | 62, 921 |
| BspFNI | CGCG | 2 cut(s) | 186, 217 |
| BspPI | GGATC | 1 cut(s) | 533 |
| BsrBI | CCGCTC | 1 cut(s) | 279 |
| BsrDI | GCAATG | 1 cut(s) | 894 |
| BsrI | ACTGG | 3 cut(s) | 109, 882, 928 |
| BssMI | GATC | 4 cut(s) | 10, 212, 525, 655 |
| BssNI | GRCGYC | 1 cut(s) | 293 |
| Bst2UI | CCWGG | 1 cut(s) | 602 |
| Bst4CI | ACNGT | 3 cut(s) | 230, 645, 775 |
| BstACI | GRCGYC | 1 cut(s) | 293 |
| BstC8I | GCNNGC | 1 cut(s) | 900 |
| BstDEI | CTNAG | 2 cut(s) | 49, 908 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstFNI | CGCG | 2 cut(s) | 186, 217 |
| BstH2I | RGCGCY | 1 cut(s) | 862 |
| BstHHI | GCGC | 1 cut(s) | 861 |
| BstKTI | GATC | 4 cut(s) | 13, 215, 528, 658 |
| BstMBI | GATC | 4 cut(s) | 10, 212, 525, 655 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 192, 578, 826, 865, 959 |
| BstNI | CCWGG | 1 cut(s) | 602 |
| BstSCI | CCNGG | 1 cut(s) | 600 |
| BstUI | CGCG | 2 cut(s) | 186, 217 |
| BstV1I | GCAGC | 5 cut(s) | 33, 940, 943, 946, 976 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsI | GCAGTG | 1 cut(s) | 567 |
| BtsIMutI | CAGTG | 1 cut(s) | 567 |
| Cac8I | GCNNGC | 1 cut(s) | 900 |
| CfoI | GCGC | 1 cut(s) | 861 |
| CseI | GACGC | 1 cut(s) | 282 |
| Csp6I | GTAC | 2 cut(s) | 226, 771 |
| CviAII | CATG | 3 cut(s) | 510, 573, 649 |
| CviQI | GTAC | 2 cut(s) | 226, 771 |
| DdeI | CTNAG | 2 cut(s) | 49, 908 |
| DpnI | GATC | 4 cut(s) | 12, 214, 527, 657 |
| DpnII | GATC | 4 cut(s) | 10, 212, 525, 655 |
| DriI | GACNNNNNGTC | 1 cut(s) | 259 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 259 |
| Eco47III | AGCGCT | 1 cut(s) | 860 |
| Eco57I | CTGAAG | 1 cut(s) | 875 |
| EcoRII | CCWGG | 1 cut(s) | 600 |
| FaeI | CATG | 3 cut(s) | 513, 576, 652 |
| FatI | CATG | 3 cut(s) | 509, 572, 648 |
| Fnu4HI | GCNGC | 6 cut(s) | 22, 280, 954, 957, 960, 990 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 6 cut(s) | 22, 280, 954, 957, 960, 990 |
| GlaI | GCGC | 1 cut(s) | 860 |
| GluI | GCNGC | 6 cut(s) | 22, 280, 954, 957, 960, 990 |
| HaeII | RGCGCY | 1 cut(s) | 862 |
| HgaI | GACGC | 1 cut(s) | 282 |
| HhaI | GCGC | 1 cut(s) | 861 |
| Hin1I | GRCGYC | 1 cut(s) | 293 |
| Hin1II | CATG | 3 cut(s) | 513, 576, 652 |
| Hin6I | GCGC | 1 cut(s) | 859 |
| HinP1I | GCGC | 1 cut(s) | 859 |
| HinfI | GANTC | 8 cut(s) | 104, 167, 236, 242, 248, 254, 266, 287 |
| HphI | GGTGA | 1 cut(s) | 607 |
| Hpy166II | GTNNAC | 3 cut(s) | 567, 598, 875 |
| Hpy188III | TCNNGA | 2 cut(s) | 29, 141 |
| Hpy8I | GTNNAC | 3 cut(s) | 567, 598, 875 |
| Hpy99I | CGWCG | 2 cut(s) | 298, 801 |
| HpyAV | CCTTC | 8 cut(s) | 138, 394, 436, 460, 469, 682, 687, 966 |
| HpyCH4III | ACNGT | 3 cut(s) | 230, 645, 775 |
| HpyCH4IV | ACGT | 1 cut(s) | 769 |
| HpyCH4V | TGCA | 2 cut(s) | 572, 868 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 192, 578, 826, 865, 959 |
| HpyF3I | CTNAG | 2 cut(s) | 49, 908 |
| HpySE526I | ACGT | 1 cut(s) | 769 |
| Hsp92I | GRCGYC | 1 cut(s) | 293 |
| Hsp92II | CATG | 3 cut(s) | 513, 576, 652 |
| HspAI | GCGC | 1 cut(s) | 859 |
| Kzo9I | GATC | 4 cut(s) | 10, 212, 525, 655 |
| LmnI | GCTCC | 3 cut(s) | 167, 192, 494 |
| Lsp1109I | GCAGC | 5 cut(s) | 33, 940, 943, 946, 976 |
| LweI | GCATC | 3 cut(s) | 691, 801, 976 |
| MaeII | ACGT | 1 cut(s) | 769 |
| MaeIII | GTNAC | 2 cut(s) | 326, 499 |
| MalI | GATC | 4 cut(s) | 12, 214, 527, 657 |
| MbiI | CCGCTC | 1 cut(s) | 279 |
| MboI | GATC | 4 cut(s) | 10, 212, 525, 655 |
| MluCI | AATT | 3 cut(s) | 505, 616, 719 |
| MluI | ACGCGT | 1 cut(s) | 184 |
| MlyI | GAGTC | 4 cut(s) | 176, 245, 248, 275 |
| MmeI | TCCRAC | 4 cut(s) | 219, 243, 249, 276 |
| MspR9I | CCNGG | 1 cut(s) | 602 |
| MvaI | CCWGG | 1 cut(s) | 602 |
| MvnI | CGCG | 2 cut(s) | 186, 217 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 192, 578, 826, 865, 959 |
| NdeII | GATC | 4 cut(s) | 10, 212, 525, 655 |
| NlaIII | CATG | 3 cut(s) | 513, 576, 652 |
| NmuCI | GTSAC | 2 cut(s) | 326, 499 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 290 |
| PfeI | GAWTC | 4 cut(s) | 104, 242, 248, 287 |
| PkrI | GCNGC | 6 cut(s) | 23, 281, 955, 958, 961, 991 |
| PleI | GAGTC | 4 cut(s) | 175, 244, 248, 274 |
| PpsI | GAGTC | 4 cut(s) | 175, 244, 248, 274 |
| PsiI | TTATAA | 1 cut(s) | 747 |
| Psp6I | CCWGG | 1 cut(s) | 600 |
| PspGI | CCWGG | 1 cut(s) | 600 |
| RsaI | GTAC | 2 cut(s) | 227, 772 |
| RsaNI | GTAC | 2 cut(s) | 226, 771 |
| SatI | GCNGC | 6 cut(s) | 22, 280, 954, 957, 960, 990 |
| Sau3AI | GATC | 4 cut(s) | 10, 212, 525, 655 |
| SchI | GAGTC | 4 cut(s) | 176, 245, 248, 275 |
| ScrFI | CCNGG | 1 cut(s) | 602 |
| SfaNI | GCATC | 3 cut(s) | 691, 801, 976 |
| Sse9I | AATT | 3 cut(s) | 505, 616, 719 |
| SsiI | CCGC | 3 cut(s) | 217, 223, 279 |
| StyD4I | CCNGG | 1 cut(s) | 600 |
| TaaI | ACNGT | 3 cut(s) | 230, 645, 775 |
| TaiI | ACGT | 1 cut(s) | 772 |
| TaqI | TCGA | 1 cut(s) | 13 |
| TasI | AATT | 3 cut(s) | 505, 616, 719 |
| TauI | GCSGC | 1 cut(s) | 282 |
| TfiI | GAWTC | 4 cut(s) | 104, 242, 248, 287 |
| TscAI | CASTG | 1 cut(s) | 574 |
| TseFI | GTSAC | 2 cut(s) | 326, 499 |
| TseI | GCWGC | 5 cut(s) | 21, 953, 956, 959, 989 |
| Tsp45I | GTSAC | 2 cut(s) | 326, 499 |
| TspDTI | ATGAA | 6 cut(s) | 78, 192, 498, 637, 801, 905 |
| TspRI | CASTG | 1 cut(s) | 574 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 935 |