Prupe.4G189700_v2.0.a1

ADP-ribosylation factor GTPase-activating protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
11278755 .. 11285726
6972 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G189700.2

Sequence Viewer

Length: 1464 bp
ATGAACGAGAAGGCCAACGTTACCAAGGAGCTCAACGCCAAGCACAGAAAGATACTGGAAGGGCTTCTTAAATTGCCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAGGGTCCAAGATGGGCTAGCGTGAATTTAGGTATCTTTGTATGCATGCAGTGTTCTGGGATCCACAGAAGTCTTGGGGTACACATATCGAAGGTGCGATCTGCTACTTTGGACACATGGCTTCCAGAGCAGGTTGCTTTTATCCAATCAATGGGAAATGAGAAGGCAAATAGTTACTGGGAAGCAGAGCTACCTCCAAACTATGACAGAGTTGGAATTGAGAATTTTATTCGTGCAAAGTATGAAGATAAGAGATGGGTTTCTAGGGATGGACAACCAAAACCACCTTCTAGAGGATGGGAAGAAAAGACTTCCACACATTGGCAGAGACCTGGAGAAAGAAGTGGGCATGGGTATGTAGGAAATTCTGAAAAAACTTTTGAGGAAAGGAAGAACATTCAATCAGCTAGTACACAACAAAGTGTTCCTGCTGCAAGAATCAGTCTTCCTGATCCTCCAAAAGGTCCTGAACAGGTTGTACATGTCCCAAGACCGCAAGATGTTCAGAAAATAGAACCAGCAGTTCTGCCAGCTGCAGCAACAAAGCAAGTTGTTGACACTGCTCCTCCTGCCCCTCCAAAAGTTGATTATGCTATTGACCTTTTCAACATGCTTTCAGTGGATGATGGTCCAAGTGAGAATGGTTCAGATGCAGCATCTGCTGAAGATAATGATTGGGCAGGTTTTCAGTCTGCTGAAAAGGCATTGACAGCTGCTGAAAAGGCATCGACAGCTGAGAAAACTGCTCCATCGAGTGAAGCAGGGAGCCATAGTAAATCTTCATCAGGAATTGAGGATCTATTTAAAGATGTACCTTCACTGACACCTGTTTCAGAGAAACCCCAGAAAGACTTAAAAAATGATATTATGAGTCTTTTTGAAAAGTCCAGCATGGTGTCACCCTTCGCCATGCATCAGCAGCAACTTGCAATGCTGGCTCAGCAGCAGTCTCTTCTCATGGCTGCTGCAGCTAAATCTGCTGGCATGGATCAAAAGTTTCCTGGTATTATTCAACAACCTGTGTCCAATGGAAGCAATTTACCCTCTCAAAGTTGGCCAAATGTTGGCTACCAAATTCCAGGATTGATGATGCCTGTAGATGGACAGGCTGACCTACAGAAAGTTACACAGAGTCAGACAAAGATCATGGGACCGGCACATCCACTGGGGAGCTCTGTTCCATATTCAACATCTAGCTTTTATAATATGGCCCAAGTTAACCCAGTTAATGGCGCGAAAAACGATGGAGCGAATAATACTCAATCTCCTTCTCCCATATCATCTGCGACTTCTGCACAATCGGCAAAAGATTATGATTTCTCATCTTTAACACAAGGGATGTTTGCAAAACAGTGA

Protein Analysis

488

Amino Acids

52.79

Weight (kDa)

6.34

Isoelectric Point (pI)

57.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1311
Acc36I ACCTGC 2 cut(s) 229, 779
AccB7I CCANNNNNTGG 4 cut(s) 259, 429, 1172, 1337
AccII CGCG 1 cut(s) 1343
AciI CCGC 1 cut(s) 602
AclI AACGTT 1 cut(s) 18
AclWI GGATC 5 cut(s) 163, 176, 554, 912, 1104
AcoI YGGCCR 1 cut(s) 1163
AcsI RAATTY 4 cut(s) 133, 331, 472, 1182
AcuI CTGAAG 1 cut(s) 792
AfaI GTAC 4 cut(s) 189, 520, 588, 921
AfiI CCNNNNNNNGG 7 cut(s) 259, 401, 429, 569, 1172, 1208, 1337
AflIII ACRYGT 1 cut(s) 589
AgsI TTSAA 5 cut(s) 509, 715, 989, 1121, 1296
AjnI CCWGG 3 cut(s) 439, 1108, 1186
AjuI GAANNNNNNNTTGG 2 cut(s) 379, 411
Alw21I GWGCWC 2 cut(s) 33, 1283
Alw26I GTCTC 2 cut(s) 430, 1062
AlwI GGATC 5 cut(s) 163, 176, 554, 912, 1104
AlwNI CAGNNNCTG 2 cut(s) 767, 824
AoxI GGCC 3 cut(s) 12, 1163, 1317
ApoI RAATTY 4 cut(s) 133, 331, 472, 1182
Asp700I GAANNNNTTC 1 cut(s) 63
AspLEI GCGC 1 cut(s) 1343
AspS9I GGNCC 5 cut(s) 113, 572, 737, 1259, 1318
AsuHPI GGTGA 1 cut(s) 999
AsuNHI GCTAGC 1 cut(s) 125
AvaII GGWCC 4 cut(s) 113, 572, 737, 1259
BalI TGGCCA 1 cut(s) 1165
BamHI GGATCC 1 cut(s) 168
BanII GRGCYC 2 cut(s) 33, 1283
BarI GAAGNNNNNNTAC 2 cut(s) 282, 314
BbsI GAAGAC 1 cut(s) 545
Bbv12I GWGCWC 2 cut(s) 33, 1283
BccI CCATC 8 cut(s) 114, 357, 371, 399, 728, 865, 1202, 1346
BciT130I CCWGG 3 cut(s) 441, 1110, 1188
BcoDI GTCTC 2 cut(s) 430, 1062
BfaI CTAG 5 cut(s) 126, 372, 399, 516, 1302
BfmI CTRYAG 4 cut(s) 642, 1074, 1203, 1223
BfuAI ACCTGC 2 cut(s) 229, 779
BlpI GCTNAGC 1 cut(s) 1047
Bme1390I CCNGG 3 cut(s) 441, 1110, 1188
Bme18I GGWCC 4 cut(s) 113, 572, 737, 1259
BmgT120I GGNCC 5 cut(s) 113, 572, 737, 1259, 1318
BmiI GGNNCC 4 cut(s) 114, 170, 875, 1260
BmrFI CCNGG 3 cut(s) 441, 1110, 1188
BmrI ACTGGG 3 cut(s) 295, 1283, 1325
BmsI GCATC 5 cut(s) 748, 773, 842, 1030, 1188
BmtI GCTAGC 1 cut(s) 129
BmuI ACTGGG 3 cut(s) 295, 1283, 1325
BpiI GAAGAC 1 cut(s) 545
BpmI CTGGAG 1 cut(s) 462
Bpu10I CCTNAGC 1 cut(s) 108
Bpu1102I GCTNAGC 1 cut(s) 1047
BsaI GGTCTC 1 cut(s) 430
BsaJI CCNNGG 1 cut(s) 24
BsaXI ACNNNNNCTCC 6 cut(s) 658, 688, 865, 895, 1357, 1387
Bsc4I CCNNNNNNNGG 7 cut(s) 259, 401, 429, 569, 1172, 1208, 1337
Bse118I RCCGGY 1 cut(s) 1261
Bse1I ACTGG 4 cut(s) 60, 290, 1278, 1331
Bse3DI GCAATG 1 cut(s) 1044
BseBI CCWGG 3 cut(s) 441, 1110, 1188
BseDI CCNNGG 1 cut(s) 24
BseGI GGATG 5 cut(s) 382, 410, 736, 1267, 1452
BseLI CCNNNNNNNGG 7 cut(s) 259, 401, 429, 569, 1172, 1208, 1337
BseMI GCAATG 1 cut(s) 1044
BseMII CTCAG 2 cut(s) 834, 1061
BseNI ACTGG 4 cut(s) 60, 290, 1278, 1331
BseRI GAGGAG 1 cut(s) 663
BsgI GTGCAG 1 cut(s) 1386
Bsh1236I CGCG 1 cut(s) 1343
BshFI GGCC 3 cut(s) 14, 1165, 1319
BsiHKAI GWGCWC 2 cut(s) 33, 1283
BsiSI CCGG 1 cut(s) 1262
BslFI GGGAC 2 cut(s) 578, 1272
BslI CCNNNNNNNGG 7 cut(s) 259, 401, 429, 569, 1172, 1208, 1337
BsmAI GTCTC 2 cut(s) 430, 1062
BsmFI GGGAC 2 cut(s) 578, 1272
BsnI GGCC 3 cut(s) 14, 1165, 1319
Bso31I GGTCTC 1 cut(s) 430
Bsp1286I GDGCHC 2 cut(s) 33, 1283
Bsp1407I TGTACA 1 cut(s) 586
Bsp143I GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
Bsp1720I GCTNAGC 1 cut(s) 1047
BspACI CCGC 1 cut(s) 602
BspANI GGCC 3 cut(s) 14, 1165, 1319
BspCNI CTCAG 2 cut(s) 835, 1060
BspFNI CGCG 1 cut(s) 1343
BspLI GGNNCC 4 cut(s) 114, 170, 875, 1260
BspMAI CTGCAG 2 cut(s) 646, 1078
BspMI ACCTGC 2 cut(s) 229, 779
BspOI GCTAGC 1 cut(s) 129
BspPI GGATC 5 cut(s) 163, 176, 554, 912, 1104
BspTNI GGTCTC 1 cut(s) 430
BsrDI GCAATG 1 cut(s) 1044
BsrFI RCCGGY 1 cut(s) 1261
BsrGI TGTACA 1 cut(s) 586
BsrI ACTGG 4 cut(s) 60, 290, 1278, 1331
BssAI RCCGGY 1 cut(s) 1261
BssECI CCNNGG 1 cut(s) 24
BssMI GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
BssT1I CCWWGG 1 cut(s) 24
Bst2UI CCWGG 3 cut(s) 441, 1110, 1188
Bst4CI ACNGT 1 cut(s) 1461
Bst6I CTCTTC 1 cut(s) 1065
BstAPI GCANNNNNTGC 1 cut(s) 767
BstAUI TGTACA 1 cut(s) 586
BstC8I GCNNGC 5 cut(s) 127, 155, 639, 1044, 1090
BstDEI CTNAG 3 cut(s) 108, 843, 1047
BstENI CCTNNNNNAGG 2 cut(s) 399, 567
BstF5I GGATG 5 cut(s) 382, 410, 736, 1267, 1452
BstFNI CGCG 1 cut(s) 1343
BstHHI GCGC 1 cut(s) 1343
BstKTI GATC 6 cut(s) 171, 209, 562, 907, 1099, 1254
BstMAI GTCTC 2 cut(s) 430, 1062
BstMBI GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
BstNI CCWGG 3 cut(s) 441, 1110, 1188
BstNSI RCATGY 3 cut(s) 157, 593, 721
BstSCI CCNGG 3 cut(s) 439, 1108, 1186
BstSFI CTRYAG 4 cut(s) 642, 1074, 1203, 1223
BstUI CGCG 1 cut(s) 1343
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 2 cut(s) 168, 904
BstYI RGATCY 2 cut(s) 168, 904
BsuRI GGCC 3 cut(s) 14, 1165, 1319
BtsCI GGATG 5 cut(s) 382, 410, 736, 1267, 1452
BtsI GCAGTG 2 cut(s) 164, 666
BtsIMutI CAGTG 5 cut(s) 164, 666, 732, 926, 1271
BveI ACCTGC 2 cut(s) 229, 779
Cac8I GCNNGC 5 cut(s) 127, 155, 639, 1044, 1090
CaiI CAGNNNCTG 2 cut(s) 767, 824
CfoI GCGC 1 cut(s) 1343
Cfr10I RCCGGY 1 cut(s) 1261
Cfr13I GGNCC 5 cut(s) 113, 572, 737, 1259, 1318
Csp6I GTAC 4 cut(s) 188, 519, 587, 920
CviQI GTAC 4 cut(s) 188, 519, 587, 920
DdeI CTNAG 3 cut(s) 108, 843, 1047
DpnI GATC 6 cut(s) 170, 208, 561, 906, 1098, 1253
DpnII GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
DraI TTTAAA 1 cut(s) 913
EaeI YGGCCR 1 cut(s) 1163
Eam1104I CTCTTC 1 cut(s) 1065
EarI CTCTTC 1 cut(s) 1065
Ecl136II GAGCTC 2 cut(s) 31, 1281
Eco130I CCWWGG 1 cut(s) 24
Eco24I GRGCYC 2 cut(s) 33, 1283
Eco31I GGTCTC 1 cut(s) 430
Eco47I GGWCC 4 cut(s) 113, 572, 737, 1259
Eco53kI GAGCTC 2 cut(s) 31, 1281
Eco57I CTGAAG 1 cut(s) 792
EcoICRI GAGCTC 2 cut(s) 31, 1281
EcoNI CCTNNNNNAGG 2 cut(s) 399, 567
EcoO109I RGGNCCY 1 cut(s) 572
EcoRII CCWGG 3 cut(s) 439, 1108, 1186
EcoT14I CCWWGG 1 cut(s) 24
EcoT22I ATGCAT 2 cut(s) 155, 1023
EcoT38I GRGCYC 2 cut(s) 33, 1283
ErhI CCWWGG 1 cut(s) 24
FalI AAGNNNNNCTT 2 cut(s) 51, 83
FaqI GGGAC 2 cut(s) 578, 1272
FokI GGATG 5 cut(s) 389, 417, 743, 1254, 1459
FriOI GRGCYC 2 cut(s) 33, 1283
FspBI CTAG 5 cut(s) 126, 372, 399, 516, 1302
GlaI GCGC 1 cut(s) 1342
GsuI CTGGAG 1 cut(s) 462
HaeIII GGCC 3 cut(s) 14, 1165, 1319
HapII CCGG 1 cut(s) 1262
HhaI GCGC 1 cut(s) 1343
Hin6I GCGC 1 cut(s) 1341
HinP1I GCGC 1 cut(s) 1341
HincII GTYRAC 2 cut(s) 664, 1327
HindII GTYRAC 2 cut(s) 664, 1327
HinfI GANTC 3 cut(s) 546, 979, 1240
HpaI GTTAAC 1 cut(s) 1327
HpaII CCGG 1 cut(s) 1262
HphI GGTGA 1 cut(s) 999
Hpy166II GTNNAC 4 cut(s) 190, 521, 664, 1327
Hpy188I TCNGA 5 cut(s) 478, 615, 757, 943, 1245
Hpy188III TCNNGA 5 cut(s) 233, 399, 557, 575, 894
Hpy8I GTNNAC 4 cut(s) 190, 521, 664, 1327
HpyAV CCTTC 8 cut(s) 4, 53, 193, 265, 405, 933, 1021, 1386
HpyCH4III ACNGT 1 cut(s) 1461
HpyCH4IV ACGT 1 cut(s) 18
HpyF3I CTNAG 3 cut(s) 108, 843, 1047
HpySE526I ACGT 1 cut(s) 18
HspAI GCGC 1 cut(s) 1341
KspAI GTTAAC 1 cut(s) 1327
Kzo9I GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
LmnI GCTCC 6 cut(s) 28, 676, 859, 873, 1278, 1355
LweI GCATC 5 cut(s) 748, 773, 842, 1030, 1188
MaeI CTAG 5 cut(s) 126, 372, 399, 516, 1302
MaeII ACGT 1 cut(s) 18
MaeIII GTNAC 4 cut(s) 19, 281, 1005, 1231
MalI GATC 6 cut(s) 170, 208, 561, 906, 1098, 1253
MboI GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
MboII GAAGA 7 cut(s) 365, 422, 511, 545, 785, 879, 1052
MflI RGATCY 2 cut(s) 168, 904
MhlI GDGCHC 2 cut(s) 33, 1283
MlsI TGGCCA 1 cut(s) 1165
MluCI AATT 8 cut(s) 71, 133, 324, 331, 472, 897, 1144, 1182
MluNI TGGCCA 1 cut(s) 1165
MlyI GAGTC 2 cut(s) 988, 1249
MmeI TCCRAC 1 cut(s) 301
MnlI CCTC 8 cut(s) 312, 395, 484, 573, 684, 693, 895, 1162
Mox20I TGGCCA 1 cut(s) 1165
Mph1103I ATGCAT 2 cut(s) 155, 1023
MroXI GAANNNNTTC 1 cut(s) 63
MscI TGGCCA 1 cut(s) 1165
MseI TTAA 6 cut(s) 69, 912, 962, 1326, 1335, 1436
MslI CAYNNNNRTG 1 cut(s) 462
Msp20I TGGCCA 1 cut(s) 1165
MspA1I CMGCKG 3 cut(s) 641, 821, 842
MspI CCGG 1 cut(s) 1262
MspR9I CCNGG 3 cut(s) 441, 1110, 1188
MvaI CCWGG 3 cut(s) 441, 1110, 1188
MvnI CGCG 1 cut(s) 1343
NdeII GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
NheI GCTAGC 1 cut(s) 125
NlaIV GGNNCC 4 cut(s) 114, 170, 875, 1260
NmuCI GTSAC 1 cut(s) 1005
NsiI ATGCAT 2 cut(s) 155, 1023
NspI RCATGY 3 cut(s) 157, 593, 721
PaeI GCATGC 1 cut(s) 157
PciI ACATGT 1 cut(s) 589
PdmI GAANNNNTTC 1 cut(s) 63
PfeI GAWTC 1 cut(s) 546
PflMI CCANNNNNTGG 4 cut(s) 259, 429, 1172, 1337
PfoI TCCNGGA 1 cut(s) 1186
PleI GAGTC 2 cut(s) 987, 1248
PpsI GAGTC 2 cut(s) 987, 1248
PpuMI RGGWCCY 1 cut(s) 572
PscI ACATGT 1 cut(s) 589
PsiI TTATAA 1 cut(s) 1311
Psp124BI GAGCTC 2 cut(s) 33, 1283
Psp1406I AACGTT 1 cut(s) 18
Psp5II RGGWCCY 1 cut(s) 572
Psp6I CCWGG 3 cut(s) 439, 1108, 1186
PspGI CCWGG 3 cut(s) 439, 1108, 1186
PspN4I GGNNCC 4 cut(s) 114, 170, 875, 1260
PspPI GGNCC 5 cut(s) 113, 572, 737, 1259, 1318
PspPPI RGGWCCY 1 cut(s) 572
PsrI GAACNNNNNNTAC 2 cut(s) 570, 602
PstI CTGCAG 2 cut(s) 646, 1078
PstNI CAGNNNCTG 2 cut(s) 767, 824
PsuI RGATCY 2 cut(s) 168, 904
PvuII CAGCTG 3 cut(s) 641, 821, 842
RsaI GTAC 4 cut(s) 189, 520, 588, 921
RsaNI GTAC 4 cut(s) 188, 519, 587, 920
RseI CAYNNNNRTG 1 cut(s) 462
SacI GAGCTC 2 cut(s) 33, 1283
SaqAI TTAA 6 cut(s) 69, 912, 962, 1326, 1335, 1436
Sau3AI GATC 6 cut(s) 168, 206, 559, 904, 1096, 1251
Sau96I GGNCC 5 cut(s) 113, 572, 737, 1259, 1318
SchI GAGTC 2 cut(s) 988, 1249
ScrFI CCNGG 3 cut(s) 441, 1110, 1188
SduI GDGCHC 2 cut(s) 33, 1283
SfaNI GCATC 5 cut(s) 748, 773, 842, 1030, 1188
SfcI CTRYAG 4 cut(s) 642, 1074, 1203, 1223
SinI GGWCC 4 cut(s) 113, 572, 737, 1259
SmiMI CAYNNNNRTG 1 cut(s) 462
SphI GCATGC 1 cut(s) 157
Sse9I AATT 8 cut(s) 71, 133, 324, 331, 472, 897, 1144, 1182
SsiI CCGC 1 cut(s) 602
SspMI CTAG 5 cut(s) 126, 372, 399, 516, 1302
SstI GAGCTC 2 cut(s) 33, 1283
StyD4I CCNGG 3 cut(s) 439, 1108, 1186
StyI CCWWGG 1 cut(s) 24
TaaI ACNGT 1 cut(s) 1461
TaiI ACGT 1 cut(s) 21
TaqI TCGA 3 cut(s) 197, 836, 860
TasI AATT 8 cut(s) 71, 133, 324, 331, 472, 897, 1144, 1182
TatI WGTACW 2 cut(s) 518, 586
TfiI GAWTC 1 cut(s) 546
Tru1I TTAA 6 cut(s) 69, 912, 962, 1326, 1335, 1436
Tru9I TTAA 6 cut(s) 69, 912, 962, 1326, 1335, 1436
TscAI CASTG 5 cut(s) 164, 673, 732, 933, 1278
TseFI GTSAC 1 cut(s) 1005
Tsp45I GTSAC 1 cut(s) 1005
TspDTI ATGAA 3 cut(s) 17, 366, 879
TspRI CASTG 5 cut(s) 164, 673, 732, 933, 1278
Van91I CCANNNNNTGG 4 cut(s) 259, 429, 1172, 1337
VpaK11BI GGWCC 4 cut(s) 113, 572, 737, 1259
XagI CCTNNNNNAGG 2 cut(s) 399, 567
XapI RAATTY 4 cut(s) 133, 331, 472, 1182
XbaI TCTAGA 1 cut(s) 398
XceI RCATGY 3 cut(s) 157, 593, 721
XcmI CCANNNNNNNNNTGG 1 cut(s) 179
XmnI GAANNNNTTC 1 cut(s) 63
XspI CTAG 5 cut(s) 126, 372, 399, 516, 1302
Zsp2I ATGCAT 2 cut(s) 155, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.