Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004446

Physical Location & Seq

Genomic Coordinates Forward (+)

14334619 .. 14340650

Gene Structure 6032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007187

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGAAACTGTTCTGGGTTTTTGGGGGGTTTATGGGGTTGATGTTTTGCAGACAAACAGATGGTTTTGTCGATTGGAATGTAACTCAAGATGAAGACTTGCATTATAGTGAGATTAATGTGTTTGGTTATACTAATGGGTTTTCCAGCACACCCTTGATGGTGGGTCTTACTCTCATTGGTGGAGCTGCTGCTAAAGGAGCAGTTTGCCTAGATGGAACATTACCTGCATACCATATCCACCGGGGATACGGATCAGGAGCAAACAGTTGGCTCATTGACTTGGAGGGAGGAGGATGGTGTGATACAATCAGAAATTGTATCTATCGCAAGAAAACTCGTCGCGGTTCATCAGCATATATGGAGAAGCATATACCATTCACAGGGATATTGAGCAACAAAGCTAGTGAAAACCCTGACTTTTTCAACTGGAACAGAGTCAAGGTTCGATATTGTGATGGTGCATCTTTTGCTGGAGACAGTGAAAATAAGGCAGCCCAATTGCATTTTCGAGGTCAGCGTATATGGAAAGCTGCTATGGAAGATCTGATGTCCAAGGGAATGCGCTATGCCAAACAGGCTCTTCTTTCTGGATGTTCTGCTGGTGCTGTTGCAACTGTCCTCCACTGTGATGAATTCCGTGAAATGTTTGCTGGAACTACTAGAGTCAAGTGCCTCAGTGATGCTGGATTATTTCTTGATGCATTTGATGTATCTGGTAGCCGCACTTTGAGAAATATGTTTAGACGGGTGGTTAACCTACAGGGAGCGAAGAAGAACCTTCCACGGAGTTGTACTAATCGCCTCAACCCAAATTTGTGCTTTTTCCCTCAGCACATAATTGCAAGTGTCAAGACCCCCCTCTTTCTAGTTAATGCAGCTTACGATACATGGCAGATCCAGGCAAGTTTAGCTCCACCAATAGCAGATCCTAATGGCAATTGGAATGAATGCAAAAAGAATCATGCACGTTGCACTCTGCGGCAGATTACCTTTTTCCAAAGCTTCCGCAATCAAATGCTCAAAGCTGTGAGCGGCTTCTCAAGGGCTGGTAAAAATGGTTTGTTCATAAACTCATGCTTTGCACATTGCCAAACCGAGAGACAGGACACATGGTTTGCACAAGATTCTCCTCATATCGGAAATAAGGGGATAGCAAAATCTGTGGGGAACTGGTACTTTGATAGACTTAATATCAAGGCTATAGATTGTCCTTACCCTTCAATTGTAATTGACTCCCACAAATTTCCTTCTACTGTCACCATCAACGAGAAGGCCAACGTCACCAAGGAGCTTAACGCCAAGCACAGAAAGATACTGGAAGGACTTGTTAAATTGCAGGAGAATAGGGAATGTGCTGACTGCAAAGCCAAGTGTCCAAGATGGGCCAGTGTGAACTTAGGCATCTTTATATGCATGCAGTGTTCTGGGATCCACAGAAGTCTTGGGGTTCACATATCCAAGGTGAGGTCTGCTACCTTGGACACATGGCTTCCAGAGCAAGTTGCATTTATTCAATCAATGGGAAATGAAAAGGCAAATAGTTACTGGGAAGCAGAACTACCTCCAAACTACCACAGAGTTGGCATTGAAAGTTTTATTCGTGCAAAGTATGAAGATAAGAGATGGGTCGCTAAAGATGGAAAACCAAAATCACCTTGTAGAGGACGCGAGCAAACTGCTTGCAAACATTGGCAGAGACCTGTGGAAAGCAGTGGGCATGGGTATATAGGAAACCCAGAAAAGAAATTTGAGGAAAGGAAGAACATACAAACAGCTAGTAGAAGAGAAACTGTTCCTGCTGGAAGAATCAGTCTTCCTGTTCCTCCTGAACATAAACCACAAAATGTTCAGAAAATAGAACCAGCAATTCCACAGGCTGAAGCAATAAAGCCAGCTGCTGAAGTTGGCCCGCCAAAGATTGATTTTGCTACTAACCTATTCGGCATGCTCTCAGTCGTAGATAGTCCTAGTGAGAATAGCTCATCAGATGCAGCACCAGCTGACGATAATGATTGGGCATGTTTCCAGTCGGCTAACGAAGCATCAAAAATTGAGAGAACCAGTCCACCAAAAGCAGCAGAAAGCAGTAGCAAGCCTGTTGCAGAGAAACCCAAGAAAGATGTTAAAAATGATATTATGAGTCTTTTCGACAAGTACTCCACTATGGTATCACCATTCGCTATGCATCAACAGCAACTCGCAATATTGGCTCAGCAGCAGTCTCATAATTTCACGGCCGCAGCTAAATCTGCTCAGCAACCTGTGCCAAATGGAAGCAGTTTACCCGCCCATAGTTGGCCAAACATTGGCTACCAAATTCCTGGAATGATGATGCCTGGTGATGGACAGGGTGGTATAAAGAATGTTGCACAGGCAAGGACAGCAGGACCGGCAAATCCAACAGGAAGCTCTGTTCCATATCCAACGTCTAGCTTTTATTCTATGCCCCAAGCTGATAGCCCAGTTGATGGCCTTACAACTGCTGGAGTGAACACAACTCAGTCACCGGCTGCAACTTCTTCTACCTCAACACAAACGGGAAAAGATTATGATTTCTCTTCCTTAACACAAGGAATGTTCGCAAAACAGTGGTCGAGGACCCTTGATGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04310 map04310

Pfam Domains

Protein Families

PAE

Protein Analysis

871

Amino Acids

95.94

Weight (kDa)

9.09

Isoelectric Point (pI)

51.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAE	PF03283	49 - 407	2.3e-166	Pectinacetylesterase
ArfGap	PF01412	437 - 545	2.3e-41	Putative GTPase activating protein for Arf

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54310
fragaria_vesca	FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910
malus_domestica	MD03G1219400.v1.1 MD11G1237500.v1.1
prunus_persica	Prupe.4G189700_v2.0.a1 Prupe.4G189700_v2.0.a1 Prupe.4G189700_v2.0.a1
pyrus_communis	pycom03g16860 pycom11g20880
rosa_chinensis	RchiOBHm_Chr5g0035341
rosa_laevigata	RLG00000007187 RLG00000033618
rosa_multiflora	Rmu_sc0007948.1_g000014
rosa_roxburghii	Rroxscaffold_1G00045060 Rroxscaffold_5G00369750
rosa_rugosa	Rorug04G0221700 Rorug04G0221700 Rorug05G0151300 Rorug05G0151400 Rorug05G0151400
rosa_samantha	Rh4AG278900 Rh4BG284300 Rh5AG244400 Rh5BG243900 Rh5CG275700 Rh5DG252900
rosa_wichuraiana	Rw5G022320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	232
AccB7I	CCANNNNNTGG	2 cut(s)	2306, 2468
AccBSI	CCGCTC	1 cut(s)	1032
AccII	CGCG	2 cut(s)	342, 1668
AciI	CCGC	8 cut(s)	342, 721, 979, 1006, 1032, 1910, 2238, 2286
AclWI	GGATC	5 cut(s)	259, 889, 920, 1423, 1436
AcoI	YGGCCR	2 cut(s)	2235, 2297
AcsI	RAATTY	5 cut(s)	632, 811, 1241, 1745, 2316
AcuI	CTGAAG	2 cut(s)	1899, 1920
AfaI	GTAC	3 cut(s)	793, 1175, 2156
AfiI	CCNNNNNNNGG	9 cut(s)	380, 1136, 1464, 1661, 2295, 2306, 2342, 2468, 2607
AgsI	TTSAA	4 cut(s)	424, 1221, 1514, 1589
AjnI	CCWGG	3 cut(s)	897, 2320, 2335
AjuI	GAANNNNNNNTTGG	2 cut(s)	489, 521
AloI	GAACNNNNNNTCC	2 cut(s)	2397, 2429
Alw26I	GTCTC	4 cut(s)	468, 1093, 1690, 2226
AlwI	GGATC	5 cut(s)	259, 889, 920, 1423, 1436
AlwNI	CAGNNNCTG	1 cut(s)	1898
AoxI	GGCC	6 cut(s)	1272, 1383, 1906, 2235, 2297, 2470
ApoI	RAATTY	5 cut(s)	632, 811, 1241, 1745, 2316
ArsI	GACNNNNNNTTYG	4 cut(s)	1097, 1129, 2576, 2608
AseI	ATTAAT	1 cut(s)	114
Asp700I	GAANNNNTTC	2 cut(s)	8, 1791
AspLEI	GCGC	1 cut(s)	564
AspS9I	GGNCC	4 cut(s)	1383, 1907, 2387, 2598
AsuC2I	CCSGG	1 cut(s)	242
AsuHPI	GGTGA	7 cut(s)	1249, 1273, 1474, 1644, 2163, 2351, 2496
AvaII	GGWCC	2 cut(s)	2387, 2598
BaeI	ACNNNNGTAYC	2 cut(s)	2151, 2184
BalI	TGGCCA	1 cut(s)	2299
BamHI	GGATCC	1 cut(s)	1428
BarI	GAAGNNNNNNTAC	2 cut(s)	1542, 1574
BbsI	GAAGAC	2 cut(s)	99, 1805
BbvCI	CCTCAGC	1 cut(s)	828
BceAI	ACGGC	1 cut(s)	2250
BcgI	CGANNNNNNTGC	2 cut(s)	1658, 1692
BciT130I	CCWGG	3 cut(s)	899, 2322, 2337
BciVI	GTATCC	1 cut(s)	239
BcnI	CCSGG	1 cut(s)	242
BcoDI	GTCTC	4 cut(s)	468, 1093, 1690, 2226
BfaI	CTAG	7 cut(s)	209, 402, 660, 866, 1776, 1968, 2430
BfmI	CTRYAG	2 cut(s)	758, 1200
BfuAI	ACCTGC	1 cut(s)	232
BfuI	GTATCC	1 cut(s)	239
BglI	GCCNNNNNGGC	1 cut(s)	575
BglII	AGATCT	1 cut(s)	541
BlpI	GCTNAGC	2 cut(s)	2211, 2253
BmcAI	AGTACT	1 cut(s)	2156
Bme1390I	CCNGG	4 cut(s)	242, 899, 2322, 2337
Bme18I	GGWCC	2 cut(s)	2387, 2598
BmgT120I	GGNCC	4 cut(s)	1383, 1907, 2387, 2598
BmiI	GGNNCC	2 cut(s)	1430, 2600
BmrFI	CCNGG	4 cut(s)	242, 899, 2322, 2337
BmrI	ACTGGG	2 cut(s)	1555, 2456
BmsI	GCATC	8 cut(s)	470, 670, 688, 1410, 1978, 2051, 2194, 2322
BmuI	ACTGGG	2 cut(s)	1555, 2456
BpiI	GAAGAC	2 cut(s)	99, 1805
BplI	GAGNNNNNCTC	2 cut(s)	1964, 1996
BpmI	CTGGAG	2 cut(s)	492, 2505
Bpu10I	CCTNAGC	1 cut(s)	828
Bpu1102I	GCTNAGC	2 cut(s)	2211, 2253
BpuEI	CTTGAG	2 cut(s)	69, 1024
BpuMI	CCSGG	1 cut(s)	242
BsaBI	GATNNNNATC	1 cut(s)	250
BsaI	GGTCTC	1 cut(s)	1690
BsaJI	CCNNGG	6 cut(s)	241, 552, 782, 1284, 1458, 1476
BsaXI	ACNNNNNCTCC	2 cut(s)	2141, 2171
Bsc4I	CCNNNNNNNGG	9 cut(s)	380, 1136, 1464, 1661, 2295, 2306, 2342, 2468, 2607
Bse118I	RCCGGY	2 cut(s)	2389, 2506
Bse1I	ACTGG	8 cut(s)	431, 1175, 1320, 1386, 1550, 2026, 2061, 2462
Bse3DI	GCAATG	1 cut(s)	1084
Bse8I	GATNNNNATC	1 cut(s)	250
BseBI	CCWGG	3 cut(s)	899, 2322, 2337
BseDI	CCNNGG	6 cut(s)	241, 552, 782, 1284, 1458, 1476
BseGI	GGATG	2 cut(s)	299, 596
BseJI	GATNNNNATC	1 cut(s)	250
BseLI	CCNNNNNNNGG	9 cut(s)	380, 1136, 1464, 1661, 2295, 2306, 2342, 2468, 2607
BseMI	GCAATG	1 cut(s)	1084
BseMII	CTCAG	6 cut(s)	688, 842, 1965, 2225, 2267, 2513
BseNI	ACTGG	8 cut(s)	431, 1175, 1320, 1386, 1550, 2026, 2061, 2462
BseRI	GAGGAG	2 cut(s)	303, 1119
BseX3I	CGGCCG	1 cut(s)	2235
Bsh1236I	CGCG	2 cut(s)	342, 1668
Bsh1285I	CGRYCG	1 cut(s)	2238
BshFI	GGCC	6 cut(s)	1274, 1385, 1908, 2237, 2299, 2472
BsiEI	CGRYCG	1 cut(s)	2238
BsiSI	CCGG	3 cut(s)	241, 2390, 2507
BslI	CCNNNNNNNGG	9 cut(s)	380, 1136, 1464, 1661, 2295, 2306, 2342, 2468, 2607
BsmAI	GTCTC	4 cut(s)	468, 1093, 1690, 2226
BsmI	GAATGC	2 cut(s)	564, 953
BsnI	GGCC	6 cut(s)	1274, 1385, 1908, 2237, 2299, 2472
Bso31I	GGTCTC	1 cut(s)	1690
Bsp143I	GATC	5 cut(s)	251, 541, 894, 925, 1428
Bsp1720I	GCTNAGC	2 cut(s)	2211, 2253
BspACI	CCGC	8 cut(s)	342, 721, 979, 1006, 1032, 1910, 2238, 2286
BspANI	GGCC	6 cut(s)	1274, 1385, 1908, 2237, 2299, 2472
BspCNI	CTCAG	6 cut(s)	687, 841, 1964, 2224, 2266, 2512
BspFNI	CGCG	2 cut(s)	342, 1668
BspLI	GGNNCC	2 cut(s)	1430, 2600
BspMI	ACCTGC	1 cut(s)	232
BspPI	GGATC	5 cut(s)	259, 889, 920, 1423, 1436
BspQI	GCTCTTC	1 cut(s)	585
BspTNI	GGTCTC	1 cut(s)	1690
BsrBI	CCGCTC	1 cut(s)	1032
BsrDI	GCAATG	1 cut(s)	1084
BsrFI	RCCGGY	2 cut(s)	2389, 2506
BsrI	ACTGG	8 cut(s)	431, 1175, 1320, 1386, 1550, 2026, 2061, 2462
BssAI	RCCGGY	2 cut(s)	2389, 2506
BssECI	CCNNGG	6 cut(s)	241, 552, 782, 1284, 1458, 1476
BssMI	GATC	5 cut(s)	251, 541, 894, 925, 1428
BssT1I	CCWWGG	4 cut(s)	552, 1284, 1458, 1476
Bst2UI	CCWGG	3 cut(s)	899, 2322, 2337
Bst4CI	ACNGT	8 cut(s)	9, 266, 479, 616, 626, 1255, 1792, 2589
Bst6I	CTCTTC	3 cut(s)	585, 1777, 2563
BstAPI	GCANNNNNTGC	2 cut(s)	467, 2263
BstC8I	GCNNGC	7 cut(s)	1415, 1670, 1681, 1893, 1910, 1946, 2093
BstDEI	CTNAG	7 cut(s)	674, 828, 1396, 1951, 2211, 2253, 2499
BstDSI	CCRYGG	1 cut(s)	782
BstENI	CCTNNNNNAGG	1 cut(s)	1659
BstF5I	GGATG	2 cut(s)	299, 596
BstFNI	CGCG	2 cut(s)	342, 1668
BstHHI	GCGC	1 cut(s)	564
BstKTI	GATC	5 cut(s)	254, 544, 897, 928, 1431
BstMAI	GTCTC	4 cut(s)	468, 1093, 1690, 2226
BstMBI	GATC	5 cut(s)	251, 541, 894, 925, 1428
BstMCI	CGRYCG	1 cut(s)	2238
BstNI	CCWGG	3 cut(s)	899, 2322, 2337
BstNSI	RCATGY	3 cut(s)	1417, 1948, 2022
BstSCI	CCNGG	4 cut(s)	240, 897, 2320, 2335
BstSFI	CTRYAG	2 cut(s)	758, 1200
BstUI	CGCG	2 cut(s)	342, 1668
BstV2I	GAAGAC	2 cut(s)	99, 1805
BstX2I	RGATCY	4 cut(s)	541, 894, 925, 1428
BstXI	CCANNNNNNTGG	2 cut(s)	1580, 2321
BstYI	RGATCY	4 cut(s)	541, 894, 925, 1428
BstZI	CGGCCG	1 cut(s)	2235
BsuI	GTATCC	1 cut(s)	239
BsuRI	GGCC	6 cut(s)	1274, 1385, 1908, 2237, 2299, 2472
BtgI	CCRYGG	1 cut(s)	782
BtsCI	GGATG	2 cut(s)	299, 596
BtsI	GCAGTG	2 cut(s)	1424, 1717
BtsIMutI	CAGTG	7 cut(s)	484, 622, 682, 1393, 1424, 1717, 2594
BveI	ACCTGC	1 cut(s)	232
Cac8I	GCNNGC	7 cut(s)	1415, 1670, 1681, 1893, 1910, 1946, 2093
CaiI	CAGNNNCTG	1 cut(s)	1898
CfoI	GCGC	1 cut(s)	564
Cfr10I	RCCGGY	2 cut(s)	2389, 2506
Cfr13I	GGNCC	4 cut(s)	1383, 1907, 2387, 2598
CseI	GACGC	1 cut(s)	1674
Csp6I	GTAC	3 cut(s)	792, 1174, 2155
CspCI	CAANNNNNGTGG	2 cut(s)	1143, 1178
CviAII	CATG	9 cut(s)	888, 962, 1074, 1110, 1414, 1485, 1718, 1945, 2019
CviQI	GTAC	3 cut(s)	792, 1174, 2155
DdeI	CTNAG	7 cut(s)	674, 828, 1396, 1951, 2211, 2253, 2499
DpnI	GATC	5 cut(s)	253, 543, 896, 927, 1430
DpnII	GATC	5 cut(s)	251, 541, 894, 925, 1428
EaeI	YGGCCR	2 cut(s)	2235, 2297
EagI	CGGCCG	1 cut(s)	2235
Eam1104I	CTCTTC	3 cut(s)	585, 1777, 2563
EarI	CTCTTC	3 cut(s)	585, 1777, 2563
EclXI	CGGCCG	1 cut(s)	2235
Eco130I	CCWWGG	4 cut(s)	552, 1284, 1458, 1476
Eco31I	GGTCTC	1 cut(s)	1690
Eco47I	GGWCC	2 cut(s)	2387, 2598
Eco52I	CGGCCG	1 cut(s)	2235
Eco57I	CTGAAG	2 cut(s)	1899, 1920
EcoNI	CCTNNNNNAGG	1 cut(s)	1659
EcoO109I	RGGNCCY	1 cut(s)	2598
EcoRI	GAATTC	1 cut(s)	632
EcoRII	CCWGG	3 cut(s)	897, 2320, 2335
EcoT14I	CCWWGG	4 cut(s)	552, 1284, 1458, 1476
EcoT22I	ATGCAT	3 cut(s)	703, 1415, 2187
ErhI	CCWWGG	4 cut(s)	552, 1284, 1458, 1476
FaeI	CATG	9 cut(s)	891, 965, 1077, 1113, 1417, 1488, 1721, 1948, 2022
FatI	CATG	9 cut(s)	887, 961, 1073, 1109, 1413, 1484, 1717, 1944, 2018
FauI	CCCGC	2 cut(s)	1917, 2293
FokI	GGATG	2 cut(s)	306, 603
FspBI	CTAG	7 cut(s)	209, 402, 660, 866, 1776, 1968, 2430
GlaI	GCGC	1 cut(s)	563
GsuI	CTGGAG	2 cut(s)	492, 2505
HaeIII	GGCC	6 cut(s)	1274, 1385, 1908, 2237, 2299, 2472
HapII	CCGG	3 cut(s)	241, 2390, 2507
HgaI	GACGC	1 cut(s)	1674
HhaI	GCGC	1 cut(s)	564
Hin1II	CATG	9 cut(s)	891, 965, 1077, 1113, 1417, 1488, 1721, 1948, 2022
Hin6I	GCGC	1 cut(s)	562
HinP1I	GCGC	1 cut(s)	562
HincII	GTYRAC	1 cut(s)	754
HindII	GTYRAC	1 cut(s)	754
HindIII	AAGCTT	1 cut(s)	1000
HinfI	GANTC	7 cut(s)	435, 663, 958, 1124, 1232, 1806, 2140
HpaI	GTTAAC	1 cut(s)	754
HpaII	CCGG	3 cut(s)	241, 2390, 2507
HphI	GGTGA	7 cut(s)	1249, 1273, 1474, 1644, 2163, 2351, 2496
Hpy166II	GTNNAC	6 cut(s)	754, 1393, 1450, 2066, 2282, 2491
Hpy188I	TCNGA	5 cut(s)	311, 546, 1139, 1851, 1987
Hpy188III	TCNNGA	7 cut(s)	86, 255, 588, 695, 850, 1493, 1826
Hpy8I	GTNNAC	6 cut(s)	754, 1393, 1450, 2066, 2282, 2491
Hpy99I	CGWCG	1 cut(s)	342
HpyAV	CCTTC	5 cut(s)	788, 1227, 1257, 1264, 1313
HpyCH4III	ACNGT	8 cut(s)	9, 266, 479, 616, 626, 1255, 1792, 2589
HpyCH4IV	ACGT	3 cut(s)	967, 1278, 2426
HpyF3I	CTNAG	7 cut(s)	674, 828, 1396, 1951, 2211, 2253, 2499
HpySE526I	ACGT	3 cut(s)	967, 1278, 2426
Hsp92II	CATG	9 cut(s)	891, 965, 1077, 1113, 1417, 1488, 1721, 1948, 2022
HspAI	GCGC	1 cut(s)	562
KspAI	GTTAAC	1 cut(s)	754
Kzo9I	GATC	5 cut(s)	251, 541, 894, 925, 1428
LguI	GCTCTTC	1 cut(s)	585
LmnI	GCTCC	6 cut(s)	182, 197, 257, 764, 916, 1288
LweI	GCATC	8 cut(s)	470, 670, 688, 1410, 1978, 2051, 2194, 2322
MaeI	CTAG	7 cut(s)	209, 402, 660, 866, 1776, 1968, 2430
MaeII	ACGT	3 cut(s)	967, 1278, 2426
MaeIII	GTNAC	5 cut(s)	79, 1255, 1279, 1541, 2502
MalI	GATC	5 cut(s)	253, 543, 896, 927, 1430
MbiI	CCGCTC	1 cut(s)	1032
MboI	GATC	5 cut(s)	251, 541, 894, 925, 1428
MfeI	CAATTG	3 cut(s)	497, 937, 1221
MflI	RGATCY	4 cut(s)	541, 894, 925, 1428
MlsI	TGGCCA	1 cut(s)	2299
MluNI	TGGCCA	1 cut(s)	2299
MlyI	GAGTC	4 cut(s)	444, 672, 1226, 2149
MmeI	TCCRAC	2 cut(s)	2423, 2447
Mox20I	TGGCCA	1 cut(s)	2299
Mph1103I	ATGCAT	3 cut(s)	703, 1415, 2187
MroXI	GAANNNNTTC	2 cut(s)	8, 1791
MscI	TGGCCA	1 cut(s)	2299
MseI	TTAA	8 cut(s)	114, 753, 870, 1188, 1293, 1329, 2124, 2564
MslI	CAYNNNNRTG	2 cut(s)	105, 627
Msp20I	TGGCCA	1 cut(s)	2299
MspA1I	CMGCKG	2 cut(s)	1895, 2000
MspI	CCGG	3 cut(s)	241, 2390, 2507
MspR9I	CCNGG	4 cut(s)	242, 899, 2322, 2337
MunI	CAATTG	3 cut(s)	497, 937, 1221
Mva1269I	GAATGC	2 cut(s)	564, 953
MvaI	CCWGG	3 cut(s)	899, 2322, 2337
MvnI	CGCG	2 cut(s)	342, 1668
NciI	CCSGG	1 cut(s)	242
NdeII	GATC	5 cut(s)	251, 541, 894, 925, 1428
NlaIII	CATG	9 cut(s)	891, 965, 1077, 1113, 1417, 1488, 1721, 1948, 2022
NlaIV	GGNNCC	2 cut(s)	1430, 2600
NmuCI	GTSAC	3 cut(s)	1255, 1279, 2502
NsiI	ATGCAT	3 cut(s)	703, 1415, 2187
NspI	RCATGY	3 cut(s)	1417, 1948, 2022
PaeI	GCATGC	2 cut(s)	1417, 1948
PciSI	GCTCTTC	1 cut(s)	585
PcsI	WCGNNNNNNNCGW	1 cut(s)	514
PctI	GAATGC	2 cut(s)	564, 953
PdmI	GAANNNNTTC	2 cut(s)	8, 1791
PfeI	GAWTC	3 cut(s)	958, 1124, 1806
PflMI	CCANNNNNTGG	2 cut(s)	2306, 2468
PfoI	TCCNGGA	1 cut(s)	2320
PleI	GAGTC	4 cut(s)	443, 671, 1226, 2148
PpsI	GAGTC	4 cut(s)	443, 671, 1226, 2148
PpuMI	RGGWCCY	1 cut(s)	2598
PshBI	ATTAAT	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	2598
Psp6I	CCWGG	3 cut(s)	897, 2320, 2335
PspGI	CCWGG	3 cut(s)	897, 2320, 2335
PspN4I	GGNNCC	2 cut(s)	1430, 2600
PspPI	GGNCC	4 cut(s)	1383, 1907, 2387, 2598
PspPPI	RGGWCCY	1 cut(s)	2598
PstNI	CAGNNNCTG	1 cut(s)	1898
PsuI	RGATCY	4 cut(s)	541, 894, 925, 1428
PvuII	CAGCTG	2 cut(s)	1895, 2000
RsaI	GTAC	3 cut(s)	793, 1175, 2156
RsaNI	GTAC	3 cut(s)	792, 1174, 2155
RseI	CAYNNNNRTG	2 cut(s)	105, 627
SapI	GCTCTTC	1 cut(s)	585
SaqAI	TTAA	8 cut(s)	114, 753, 870, 1188, 1293, 1329, 2124, 2564
Sau3AI	GATC	5 cut(s)	251, 541, 894, 925, 1428
Sau96I	GGNCC	4 cut(s)	1383, 1907, 2387, 2598
ScaI	AGTACT	1 cut(s)	2156
SchI	GAGTC	4 cut(s)	444, 672, 1226, 2149
ScrFI	CCNGG	4 cut(s)	242, 899, 2322, 2337
SfaNI	GCATC	8 cut(s)	470, 670, 688, 1410, 1978, 2051, 2194, 2322
SfcI	CTRYAG	2 cut(s)	758, 1200
SinI	GGWCC	2 cut(s)	2387, 2598
SmiMI	CAYNNNNRTG	2 cut(s)	105, 627
SmlI	CTYRAG	2 cut(s)	84, 1039
SmoI	CTYRAG	2 cut(s)	84, 1039
SphI	GCATGC	2 cut(s)	1417, 1948
SsiI	CCGC	8 cut(s)	342, 721, 979, 1006, 1032, 1910, 2238, 2286
SspI	AATATT	1 cut(s)	2205
SspMI	CTAG	7 cut(s)	209, 402, 660, 866, 1776, 1968, 2430
StyD4I	CCNGG	4 cut(s)	240, 897, 2320, 2335
StyI	CCWWGG	4 cut(s)	552, 1284, 1458, 1476
TaaI	ACNGT	8 cut(s)	9, 266, 479, 616, 626, 1255, 1792, 2589
TaiI	ACGT	3 cut(s)	970, 1281, 2429
TaqI	TCGA	5 cut(s)	69, 445, 508, 2148, 2594
TatI	WGTACW	2 cut(s)	791, 2154
TauI	GCSGC	4 cut(s)	723, 982, 1035, 2240
TfiI	GAWTC	3 cut(s)	958, 1124, 1806
Tru1I	TTAA	8 cut(s)	114, 753, 870, 1188, 1293, 1329, 2124, 2564
Tru9I	TTAA	8 cut(s)	114, 753, 870, 1188, 1293, 1329, 2124, 2564
TscAI	CASTG	7 cut(s)	484, 629, 682, 1393, 1424, 1717, 2594
TseFI	GTSAC	3 cut(s)	1255, 1279, 2502
Tsp45I	GTSAC	3 cut(s)	1255, 1279, 2502
TspDTI	ATGAA	8 cut(s)	17, 105, 336, 645, 960, 1054, 1542, 1626
TspGWI	ACGGA	3 cut(s)	264, 626, 799
TspRI	CASTG	7 cut(s)	484, 629, 682, 1393, 1424, 1717, 2594
Van91I	CCANNNNNTGG	2 cut(s)	2306, 2468
VpaK11BI	GGWCC	2 cut(s)	2387, 2598
VspI	ATTAAT	1 cut(s)	114
XagI	CCTNNNNNAGG	1 cut(s)	1659
XapI	RAATTY	5 cut(s)	632, 811, 1241, 1745, 2316
XceI	RCATGY	3 cut(s)	1417, 1948, 2022
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1439
XmnI	GAANNNNTTC	2 cut(s)	8, 1791
XspI	CTAG	7 cut(s)	209, 402, 660, 866, 1776, 1968, 2430
ZrmI	AGTACT	1 cut(s)	2156
Zsp2I	ATGCAT	3 cut(s)	703, 1415, 2187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.