Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004446

Physical Location & Seq

Genomic Coordinates Reverse (-)

64115187 .. 64121034

Gene Structure 5848 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00045060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGAACGAGAAGGCCAACGTCACCAAGGAGCTCAACGCCAAGCACAGAAAGATACTGGAAGGACTTCTTAAATTGCCAGAGAATAGGGAATGTGCTGACTGCAAAGCCAAGGGTCCAAGATGGGCCAGTGTGAACTTAGGTATCTTTGTATGCATGCAGTGTTCTGGGATCCACAGAAGTCTCGGGGTACACATATCCAAGGTGAGGTCTGCTACCTTGGACACATGGCTACCAGAGCAGGTGGCGTTTATTCAATCAATGGGAAATGAGAAGGCAAATAGTTACTGGGAAGCAGAACTACCTCCAAACTATGACAGAGTTGGTATTGAAAATTTTATTCGTGCAAAGTATGAAGATAAGAGATGGGTCGCTAAAGATGGAAAACCAAAATCACCTTCTAGAGGACATGAGGAAAATGCTTCCACACATTGGCAGAGACCTGTTGAAAGCAGTGGGCATGGGTATATCGCAAATTCTGAAAAGAAATTTGAGGAAAGGAAGAACATACAAACAGCTAGTAGAAGAGACAGTGTTCCTGCTGGAAGAATCAGTCTTCCTGTTCCTCCTAAAGGGCCTGATCATGTTGTACAGGTCCCAAAACCACAAAATGTTCAGAAAACAGAACCAGCAGTTCCACAGGCTGAAGCAACAAAGCCAGCTGCTGAAGTTGCTTCTGCTGCGCCTCCAAAAGTTGATTATGCTACTGACCTTTTCGGCATGCTCTCAGTAGAAAGTCCCAGTGAGAATAGCTCAGATGCAGCACCAGCTGACGATAATGATTGGGCAGGTTTCCAGTCGGCTAATGAAGCATCAAAAATTGAGAAAACCAGTCCACCAAATGTAGCAGAAGGCAGTAGCAAGTCTGCATCTGGAATCGAGGATTTATTTGCAGATTCACCGTCATTAACACCTGTTGCAGAGAAACCCAAGAAAGATGTTAAAAATGATATTATGAGTCTTTTTGAGAAGTCCAATATGGTGTCACCATTCGCTATGCATCAACAGCAACTCACAATGTTGGCTCAGCAGCAGTCTCTTTTCATGGCTGCAGCTAAATCTGCTGGTGGGGACCAAAAGTTTCCGGGCACTACACAACAACCTGTTTTGAATGGAAGCAATTTACCTTCCCAACAGCAACTTGCAATGCTGGCTCAGCAGCAGTCTTTTCTCATGGCTGCTGCAGCTAAATCTGCTGGCATGGACCAAAAGTTCCCTGGTGTTGCTCAACAGCCCGTGTCAAATGGAAGCAGTTTACCCTCCCAAAGTTGGCCAAACGTTGGCTACCAAATTCCTGGAATGATGATGCCTATAGATGGACAGGCAAGGACAGCGGGACCGGCAAATCCAACGGGAAGTTCTGTTCCATATCCAACGTCTAGAGCTCAAACTTTTGGGGAATTGCCCCAGATTTTCCTTTTCAATTTCAGTTATAAATCTGGGACTGGTACTTCCTTTGTCTGCTTTTATTCTATGCCCCAAGTTAGCCCAGCTAATGGCCTTACAAATGCTGGAGTGAACAAAACTCAGTCACCGGCTCCAACATCGGCTGCAGCTTCTTCTACCTCAATACAAAAGGGAAAAGATTATGATTTCTCTTCCTTAACACAAGGGATGTTCGCAAAACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0007275 GO:0008150 GO:0009791 GO:0009838 GO:0009908 GO:0009987 GO:0010227 GO:0012505 GO:0016043 GO:0016192 GO:0022414 GO:0022607 GO:0030135 GO:0030136 GO:0030276 GO:0030308 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0034622 GO:0035459 GO:0035652 GO:0040008 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045926 GO:0048367 GO:0048437 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060858 GO:0061458 GO:0065003 GO:0065007 GO:0065009 GO:0071840 GO:0090567 GO:0090630 GO:0097708 GO:0098791 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

ArfGap

Protein Analysis

542

Amino Acids

58.37

Weight (kDa)

8.56

Isoelectric Point (pI)

58.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArfGap	PF01412	17 - 125	5.8e-42	Putative GTPase activating protein for Arf

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54310
fragaria_vesca	FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910
malus_domestica	MD03G1219400.v1.1 MD11G1237500.v1.1
prunus_persica	Prupe.4G189700_v2.0.a1 Prupe.4G189700_v2.0.a1 Prupe.4G189700_v2.0.a1
pyrus_communis	pycom03g16860 pycom11g20880
rosa_chinensis	RchiOBHm_Chr5g0035341
rosa_laevigata	RLG00000007187 RLG00000033618
rosa_multiflora	Rmu_sc0007948.1_g000014
rosa_roxburghii	Rroxscaffold_1G00045060 Rroxscaffold_5G00369750
rosa_rugosa	Rorug04G0221700 Rorug04G0221700 Rorug05G0151300 Rorug05G0151400 Rorug05G0151400
rosa_samantha	Rh4AG278900 Rh4BG284300 Rh5AG244400 Rh5BG243900 Rh5CG275700 Rh5DG252900
rosa_wichuraiana	Rw5G022320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1431
AarI	CACCTGC	1 cut(s)	229
Acc36I	ACCTGC	2 cut(s)	229, 776
AccB7I	CCANNNNNTGG	3 cut(s)	429, 1277, 1493
AciI	CCGC	1 cut(s)	1331
AclI	AACGTT	1 cut(s)	1275
AclWI	GGATC	2 cut(s)	163, 176
AcoI	YGGCCR	1 cut(s)	1268
AcsI	RAATTY	4 cut(s)	331, 472, 485, 1287
AcuI	CTGAAG	2 cut(s)	663, 684
AfaI	GTAC	3 cut(s)	189, 588, 1447
AfiI	CCNNNNNNNGG	8 cut(s)	204, 401, 429, 569, 1266, 1277, 1313, 1493
AgsI	TTSAA	5 cut(s)	254, 329, 446, 1108, 1420
AjnI	CCWGG	2 cut(s)	1213, 1291
AjuI	GAANNNNNNNTTGG	4 cut(s)	379, 411, 1339, 1371
AloI	GAACNNNNNNTCC	4 cut(s)	1193, 1225, 1344, 1376
Alw21I	GWGCWC	2 cut(s)	33, 1384
Alw26I	GTCTC	4 cut(s)	185, 430, 519, 1038
AlwI	GGATC	2 cut(s)	163, 176
AlwNI	CAGNNNCTG	1 cut(s)	662
Ama87I	CYCGRG	1 cut(s)	182
AoxI	GGCC	5 cut(s)	12, 123, 572, 1268, 1495
ApoI	RAATTY	4 cut(s)	331, 472, 485, 1287
Asp700I	GAANNNNTTC	1 cut(s)	63
AspLEI	GCGC	1 cut(s)	682
AspS9I	GGNCC	7 cut(s)	113, 123, 572, 592, 1069, 1201, 1334
AsuC2I	CCSGG	1 cut(s)	1083
AsuHPI	GGTGA	6 cut(s)	13, 214, 384, 888, 975, 1521
AvaI	CYCGRG	1 cut(s)	182
AvaII	GGWCC	5 cut(s)	113, 592, 1069, 1201, 1334
BaeGI	GKGCMC	1 cut(s)	1088
BaeI	ACNNNNGTAYC	2 cut(s)	124, 157
BalI	TGGCCA	1 cut(s)	1270
BamHI	GGATCC	1 cut(s)	168
BanII	GRGCYC	2 cut(s)	33, 1384
BarI	GAAGNNNNNNTAC	2 cut(s)	282, 314
BbsI	GAAGAC	1 cut(s)	545
Bbv12I	GWGCWC	2 cut(s)	33, 1384
BccI	CCATC	4 cut(s)	114, 357, 371, 1307
BciT130I	CCWGG	2 cut(s)	1215, 1293
BclI	TGATCA	1 cut(s)	577
BcnI	CCSGG	1 cut(s)	1083
BcoDI	GTCTC	4 cut(s)	185, 430, 519, 1038
BfaI	CTAG	3 cut(s)	399, 516, 1377
BfmI	CTRYAG	4 cut(s)	1047, 1179, 1308, 1548
BfuAI	ACCTGC	2 cut(s)	229, 776
BlpI	GCTNAGC	2 cut(s)	1023, 1152
Bme1390I	CCNGG	3 cut(s)	1083, 1215, 1293
Bme18I	GGWCC	5 cut(s)	113, 592, 1069, 1201, 1334
BmeT110I	CYCGRG	1 cut(s)	182
BmgT120I	GGNCC	7 cut(s)	113, 123, 572, 592, 1069, 1201, 1334
BmiI	GGNNCC	6 cut(s)	114, 170, 594, 1070, 1335, 1536
BmrFI	CCNGG	3 cut(s)	1083, 1215, 1293
BmrI	ACTGGG	2 cut(s)	295, 732
BmsI	GCATC	5 cut(s)	745, 818, 875, 1006, 1293
BmuI	ACTGGG	2 cut(s)	295, 732
BpiI	GAAGAC	1 cut(s)	545
BplI	GAGNNNNNCTC	2 cut(s)	734, 766
BpmI	CTGGAG	1 cut(s)	1530
Bpu1102I	GCTNAGC	2 cut(s)	1023, 1152
BpuMI	CCSGG	1 cut(s)	1083
BsaI	GGTCTC	1 cut(s)	430
BsaJI	CCNNGG	5 cut(s)	24, 108, 198, 216, 1213
Bsc4I	CCNNNNNNNGG	8 cut(s)	204, 401, 429, 569, 1266, 1277, 1313, 1493
Bse118I	RCCGGY	2 cut(s)	1336, 1531
Bse1I	ACTGG	7 cut(s)	60, 126, 290, 738, 793, 828, 1447
Bse3DI	GCAATG	1 cut(s)	1149
BseBI	CCWGG	2 cut(s)	1215, 1293
BseDI	CCNNGG	5 cut(s)	24, 108, 198, 216, 1213
BseGI	GGATG	1 cut(s)	1617
BseLI	CCNNNNNNNGG	8 cut(s)	204, 401, 429, 569, 1266, 1277, 1313, 1493
BseMI	GCAATG	1 cut(s)	1149
BseMII	CTCAG	5 cut(s)	738, 765, 1037, 1166, 1538
BseNI	ACTGG	7 cut(s)	60, 126, 290, 738, 793, 828, 1447
BseSI	GKGCMC	1 cut(s)	1088
BseYI	CCCAGC	1 cut(s)	1486
BshFI	GGCC	5 cut(s)	14, 125, 574, 1270, 1497
BsiHKAI	GWGCWC	2 cut(s)	33, 1384
BsiHKCI	CYCGRG	1 cut(s)	182
BsiSI	CCGG	3 cut(s)	1082, 1337, 1532
BslFI	GGGAC	5 cut(s)	578, 720, 1082, 1347, 1453
BslI	CCNNNNNNNGG	8 cut(s)	204, 401, 429, 569, 1266, 1277, 1313, 1493
BsmAI	GTCTC	4 cut(s)	185, 430, 519, 1038
BsmFI	GGGAC	5 cut(s)	578, 720, 1082, 1347, 1453
BsnI	GGCC	5 cut(s)	14, 125, 574, 1270, 1497
Bso31I	GGTCTC	1 cut(s)	430
BsoBI	CYCGRG	1 cut(s)	182
Bsp1286I	GDGCHC	3 cut(s)	33, 1088, 1384
Bsp1407I	TGTACA	1 cut(s)	586
Bsp143I	GATC	2 cut(s)	168, 577
Bsp1720I	GCTNAGC	2 cut(s)	1023, 1152
BspACI	CCGC	1 cut(s)	1331
BspANI	GGCC	5 cut(s)	14, 125, 574, 1270, 1497
BspCNI	CTCAG	5 cut(s)	737, 764, 1036, 1165, 1537
BspLI	GGNNCC	6 cut(s)	114, 170, 594, 1070, 1335, 1536
BspMAI	CTGCAG	3 cut(s)	1051, 1183, 1552
BspMI	ACCTGC	2 cut(s)	229, 776
BspPI	GGATC	2 cut(s)	163, 176
BspTNI	GGTCTC	1 cut(s)	430
BsrDI	GCAATG	1 cut(s)	1149
BsrFI	RCCGGY	2 cut(s)	1336, 1531
BsrGI	TGTACA	1 cut(s)	586
BsrI	ACTGG	7 cut(s)	60, 126, 290, 738, 793, 828, 1447
BssAI	RCCGGY	2 cut(s)	1336, 1531
BssECI	CCNNGG	5 cut(s)	24, 108, 198, 216, 1213
BssMI	GATC	2 cut(s)	168, 577
BssT1I	CCWWGG	4 cut(s)	24, 108, 198, 216
Bst2UI	CCWGG	2 cut(s)	1215, 1293
Bst4CI	ACNGT	3 cut(s)	530, 900, 1626
Bst6I	CTCTTC	2 cut(s)	517, 1600
BstAUI	TGTACA	1 cut(s)	586
BstC8I	GCNNGC	5 cut(s)	155, 657, 719, 1149, 1195
BstDEI	CTNAG	6 cut(s)	136, 724, 751, 1023, 1152, 1524
BstENI	CCTNNNNNAGG	2 cut(s)	399, 567
BstF5I	GGATG	1 cut(s)	1617
BstHHI	GCGC	1 cut(s)	682
BstKTI	GATC	2 cut(s)	171, 580
BstMAI	GTCTC	4 cut(s)	185, 430, 519, 1038
BstMBI	GATC	2 cut(s)	168, 577
BstNI	CCWGG	2 cut(s)	1215, 1293
BstNSI	RCATGY	2 cut(s)	157, 721
BstSCI	CCNGG	3 cut(s)	1081, 1213, 1291
BstSFI	CTRYAG	4 cut(s)	1047, 1179, 1308, 1548
BstSLI	GKGCMC	1 cut(s)	1088
BstV2I	GAAGAC	1 cut(s)	545
BstX2I	RGATCY	1 cut(s)	168
BstXI	CCANNNNNNTGG	1 cut(s)	1292
BstYI	RGATCY	1 cut(s)	168
BsuRI	GGCC	5 cut(s)	14, 125, 574, 1270, 1497
BtsCI	GGATG	1 cut(s)	1617
BtsI	GCAGTG	2 cut(s)	164, 457
BtsIMutI	CAGTG	5 cut(s)	133, 164, 457, 535, 745
BveI	ACCTGC	2 cut(s)	229, 776
Cac8I	GCNNGC	5 cut(s)	155, 657, 719, 1149, 1195
CaiI	CAGNNNCTG	1 cut(s)	662
CfoI	GCGC	1 cut(s)	682
Cfr10I	RCCGGY	2 cut(s)	1336, 1531
Cfr13I	GGNCC	7 cut(s)	113, 123, 572, 592, 1069, 1201, 1334
Csp6I	GTAC	3 cut(s)	188, 587, 1446
CviAII	CATG	9 cut(s)	154, 225, 407, 458, 581, 718, 1042, 1171, 1198
CviQI	GTAC	3 cut(s)	188, 587, 1446
DdeI	CTNAG	6 cut(s)	136, 724, 751, 1023, 1152, 1524
DpnI	GATC	2 cut(s)	170, 579
DpnII	GATC	2 cut(s)	168, 577
EaeI	YGGCCR	1 cut(s)	1268
Eam1104I	CTCTTC	2 cut(s)	517, 1600
EarI	CTCTTC	2 cut(s)	517, 1600
Ecl136II	GAGCTC	2 cut(s)	31, 1382
Eco130I	CCWWGG	4 cut(s)	24, 108, 198, 216
Eco24I	GRGCYC	2 cut(s)	33, 1384
Eco31I	GGTCTC	1 cut(s)	430
Eco47I	GGWCC	5 cut(s)	113, 592, 1069, 1201, 1334
Eco53kI	GAGCTC	2 cut(s)	31, 1382
Eco57I	CTGAAG	2 cut(s)	663, 684
Eco88I	CYCGRG	1 cut(s)	182
EcoICRI	GAGCTC	2 cut(s)	31, 1382
EcoNI	CCTNNNNNAGG	2 cut(s)	399, 567
EcoO109I	RGGNCCY	2 cut(s)	572, 592
EcoRII	CCWGG	2 cut(s)	1213, 1291
EcoT14I	CCWWGG	4 cut(s)	24, 108, 198, 216
EcoT22I	ATGCAT	2 cut(s)	155, 999
EcoT38I	GRGCYC	2 cut(s)	33, 1384
ErhI	CCWWGG	4 cut(s)	24, 108, 198, 216
FaeI	CATG	9 cut(s)	157, 228, 410, 461, 584, 721, 1045, 1174, 1201
FalI	AAGNNNNNCTT	2 cut(s)	51, 83
FaqI	GGGAC	5 cut(s)	578, 720, 1082, 1347, 1453
FatI	CATG	9 cut(s)	153, 224, 406, 457, 580, 717, 1041, 1170, 1197
FauI	CCCGC	1 cut(s)	1324
FbaI	TGATCA	1 cut(s)	577
FokI	GGATG	1 cut(s)	1624
FriOI	GRGCYC	2 cut(s)	33, 1384
FspBI	CTAG	3 cut(s)	399, 516, 1377
GlaI	GCGC	1 cut(s)	681
GsaI	CCCAGC	1 cut(s)	1490
GsuI	CTGGAG	1 cut(s)	1530
HaeIII	GGCC	5 cut(s)	14, 125, 574, 1270, 1497
HapII	CCGG	3 cut(s)	1082, 1337, 1532
HhaI	GCGC	1 cut(s)	682
Hin1II	CATG	9 cut(s)	157, 228, 410, 461, 584, 721, 1045, 1174, 1201
Hin6I	GCGC	1 cut(s)	680
HinP1I	GCGC	1 cut(s)	680
HinfI	GANTC	4 cut(s)	546, 873, 893, 955
HpaII	CCGG	3 cut(s)	1082, 1337, 1532
HphI	GGTGA	6 cut(s)	13, 214, 384, 888, 975, 1521
Hpy166II	GTNNAC	5 cut(s)	133, 190, 833, 1253, 1516
Hpy188I	TCNGA	3 cut(s)	478, 615, 754
Hpy188III	TCNNGA	3 cut(s)	399, 870, 1377
Hpy8I	GTNNAC	5 cut(s)	133, 190, 833, 1253, 1516
HpyAV	CCTTC	6 cut(s)	4, 53, 265, 405, 842, 1134
HpyCH4III	ACNGT	3 cut(s)	530, 900, 1626
HpyCH4IV	ACGT	3 cut(s)	18, 1275, 1373
HpyF3I	CTNAG	6 cut(s)	136, 724, 751, 1023, 1152, 1524
HpySE526I	ACGT	3 cut(s)	18, 1275, 1373
Hsp92II	CATG	9 cut(s)	157, 228, 410, 461, 584, 721, 1045, 1174, 1201
HspAI	GCGC	1 cut(s)	680
Ksp22I	TGATCA	1 cut(s)	577
Kzo9I	GATC	2 cut(s)	168, 577
LmnI	GCTCC	2 cut(s)	28, 1540
LweI	GCATC	5 cut(s)	745, 818, 875, 1006, 1293
MaeI	CTAG	3 cut(s)	399, 516, 1377
MaeII	ACGT	3 cut(s)	18, 1275, 1373
MaeIII	GTNAC	4 cut(s)	19, 281, 981, 1527
MalI	GATC	2 cut(s)	170, 579
MboI	GATC	2 cut(s)	168, 577
MboII	GAAGA	7 cut(s)	365, 511, 534, 545, 555, 1548, 1587
MflI	RGATCY	1 cut(s)	168
MhlI	GDGCHC	3 cut(s)	33, 1088, 1384
MlsI	TGGCCA	1 cut(s)	1270
MluCI	AATT	9 cut(s)	71, 331, 472, 485, 816, 1117, 1287, 1397, 1420
MluNI	TGGCCA	1 cut(s)	1270
MlyI	GAGTC	1 cut(s)	964
MmeI	TCCRAC	3 cut(s)	1370, 1394, 1562
Mox20I	TGGCCA	1 cut(s)	1270
Mph1103I	ATGCAT	2 cut(s)	155, 999
MroXI	GAANNNNTTC	1 cut(s)	63
MscI	TGGCCA	1 cut(s)	1270
MseI	TTAA	4 cut(s)	69, 905, 939, 1601
Msp20I	TGGCCA	1 cut(s)	1270
MspA1I	CMGCKG	3 cut(s)	659, 767, 1331
MspI	CCGG	3 cut(s)	1082, 1337, 1532
MspR9I	CCNGG	3 cut(s)	1083, 1215, 1293
MvaI	CCWGG	2 cut(s)	1215, 1293
NciI	CCSGG	1 cut(s)	1083
NdeII	GATC	2 cut(s)	168, 577
NlaIII	CATG	9 cut(s)	157, 228, 410, 461, 584, 721, 1045, 1174, 1201
NlaIV	GGNNCC	6 cut(s)	114, 170, 594, 1070, 1335, 1536
NmuCI	GTSAC	3 cut(s)	19, 981, 1527
NsiI	ATGCAT	2 cut(s)	155, 999
NspI	RCATGY	2 cut(s)	157, 721
PaeI	GCATGC	2 cut(s)	157, 721
PaqCI	CACCTGC	1 cut(s)	229
PdmI	GAANNNNTTC	1 cut(s)	63
PfeI	GAWTC	3 cut(s)	546, 873, 893
PflMI	CCANNNNNTGG	3 cut(s)	429, 1277, 1493
PfoI	TCCNGGA	1 cut(s)	1291
PleI	GAGTC	1 cut(s)	963
PpsI	GAGTC	1 cut(s)	963
PpuMI	RGGWCCY	1 cut(s)	592
PsiI	TTATAA	1 cut(s)	1431
Psp124BI	GAGCTC	2 cut(s)	33, 1384
Psp1406I	AACGTT	1 cut(s)	1275
Psp5II	RGGWCCY	1 cut(s)	592
Psp6I	CCWGG	2 cut(s)	1213, 1291
PspFI	CCCAGC	1 cut(s)	1486
PspGI	CCWGG	2 cut(s)	1213, 1291
PspN4I	GGNNCC	6 cut(s)	114, 170, 594, 1070, 1335, 1536
PspPI	GGNCC	7 cut(s)	113, 123, 572, 592, 1069, 1201, 1334
PspPPI	RGGWCCY	1 cut(s)	592
PstI	CTGCAG	3 cut(s)	1051, 1183, 1552
PstNI	CAGNNNCTG	1 cut(s)	662
PsuI	RGATCY	1 cut(s)	168
PvuII	CAGCTG	2 cut(s)	659, 767
RsaI	GTAC	3 cut(s)	189, 588, 1447
RsaNI	GTAC	3 cut(s)	188, 587, 1446
SacI	GAGCTC	2 cut(s)	33, 1384
SaqAI	TTAA	4 cut(s)	69, 905, 939, 1601
Sau3AI	GATC	2 cut(s)	168, 577
Sau96I	GGNCC	7 cut(s)	113, 123, 572, 592, 1069, 1201, 1334
SchI	GAGTC	1 cut(s)	964
ScrFI	CCNGG	3 cut(s)	1083, 1215, 1293
SduI	GDGCHC	3 cut(s)	33, 1088, 1384
SfaNI	GCATC	5 cut(s)	745, 818, 875, 1006, 1293
SfcI	CTRYAG	4 cut(s)	1047, 1179, 1308, 1548
SinI	GGWCC	5 cut(s)	113, 592, 1069, 1201, 1334
SphI	GCATGC	2 cut(s)	157, 721
Sse9I	AATT	9 cut(s)	71, 331, 472, 485, 816, 1117, 1287, 1397, 1420
SsiI	CCGC	1 cut(s)	1331
SspMI	CTAG	3 cut(s)	399, 516, 1377
SstI	GAGCTC	2 cut(s)	33, 1384
StyD4I	CCNGG	3 cut(s)	1081, 1213, 1291
StyI	CCWWGG	4 cut(s)	24, 108, 198, 216
TaaI	ACNGT	3 cut(s)	530, 900, 1626
TaiI	ACGT	3 cut(s)	21, 1278, 1376
TaqI	TCGA	1 cut(s)	876
TasI	AATT	9 cut(s)	71, 331, 472, 485, 816, 1117, 1287, 1397, 1420
TatI	WGTACW	1 cut(s)	586
TfiI	GAWTC	3 cut(s)	546, 873, 893
Tru1I	TTAA	4 cut(s)	69, 905, 939, 1601
Tru9I	TTAA	4 cut(s)	69, 905, 939, 1601
TscAI	CASTG	5 cut(s)	133, 164, 457, 535, 745
TseFI	GTSAC	3 cut(s)	19, 981, 1527
Tsp45I	GTSAC	3 cut(s)	19, 981, 1527
TspDTI	ATGAA	4 cut(s)	17, 366, 819, 1030
TspRI	CASTG	5 cut(s)	133, 164, 457, 535, 745
Van91I	CCANNNNNTGG	3 cut(s)	429, 1277, 1493
VpaK11BI	GGWCC	5 cut(s)	113, 592, 1069, 1201, 1334
XagI	CCTNNNNNAGG	2 cut(s)	399, 567
XapI	RAATTY	4 cut(s)	331, 472, 485, 1287
XbaI	TCTAGA	2 cut(s)	398, 1376
XceI	RCATGY	2 cut(s)	157, 721
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1211
XmnI	GAANNNNTTC	1 cut(s)	63
XspI	CTAG	3 cut(s)	399, 516, 1377
Zsp2I	ATGCAT	2 cut(s)	155, 999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.