Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0004446

Physical Location & Seq

Genomic Coordinates Forward (+)

29457083 .. 29462703

Gene Structure 5621 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG243900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGCAGATTCTGGAAGGACTTCTTAAATTGCCAGAGAATAGGGAATGTGCTGACTGCAAAGCCAAGGGTCCAAGATGGGCCAGTGTGAACTTAGGTATCTTTGTATGCATGCAGTGTTCTGGGATCCACAGAAGTCTCGGGGTACACATATCCAAGGTGAGGTCTGCTACCTTGGACACATGGCTACCAGAGCAGGTGGCATTTATTCAATCAATGGGAAATGAAAAGGCAAATAGTTACTGGGAAGCAGAACTACCTCCAAACTATGACAGAGTTGGTATTGAAAATTTTATTCGTGCAAAGTATGAAGATAAGAGATGGATTGCTAAAGATGGAAAACCAAAATCACCTTCTAGAGGACGTGAGGAAAATGCTTCCACACATTGGCAGAGACCTGTTGAAAGCAGTGGGCATGGGTATGTTGCAAATTCTGAAAAGAAATTTGAGGAAAGGAAGAACATACAAACAGCTAGTAGAAGAGACAGTGTTCCTGCTGGAAGAATCAGTCTTCCTGTTCCTCCTAAAGGGCCTGATCATGTTGTACAGGTCCCAAAACCACAAAATGTTCAGAAAACAGAACCAGCAGTTCCACAGGCTGAAGCAACAAAGCCAGCTGCTGAAGTTGCTTCTGCTGTGCCTCCAAAAGTTGATTATGCTACTGACCTTTTCGGCATGCTCTCAGTAGAAAGTCCCGGTGAGAATAGCTCAGATGCAGCACCAGCTGACGATAATGATTGGGCAGGTTTCCAGTCGGCTAATGAAGCATCAAAAATTGAGAAAACCAGTCCACCAAATGCAGCAGAAGGCAGTAGCAAGTCTGCATCAGGAATCGAGGATTTATTTGCAGATTCACCGTCATTAACACCTGTTGCAGAGAAACCCAAGAAAGATGTTAAAAATGATATTATGAGTCTTTTTGAGAAGTCCAATATGGTGTCACCATTCGCTATGCATCAACAGCAACTCACAATGTTGGCTCAGCAGCAGTCTCTTTTCATGGCTGCAGCTAAATCTGCTGGTGGGGACCAAAAGTTTCCGGGCACTACACAACAACCTGTTTTGAATGGAAGCAATTTACCTTCCCAACAGCAACTTGCAATGCTGGCTCAGCAGCAGTCTTTTCTCATGGCTGCTGCAGCTAAATCTGCTGGCATGGACCAAAAGTTCCCTGGCGTTGCTCAACAGCCCGTGTCAAATGGAAGCAGTTTACCCTCCCAAAGTTGGCCAAACATTGGCTACCAAATTCCTGGAATGATGATGCCTATAGATGGACAGGCAAGGACAGCGGGACCGGCAAATCCAACGGGAAGTTCTGTTCCATATCCAACGTCTAGCTTTTATTCTATGCCCCAAGTTAGCCCAGCTAATGGCCTTACAAATGCTGGAGTGAACAAAAGTCAGTCACCGTCTCCAACATCGGCTGCAGCTTCTTCTACCCCAATACAAAAGGGAAAAGATTATGATTTCTCTTCCTTAACACAAGGGATGTTCGCAAAACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0007275 GO:0008150 GO:0009791 GO:0009838 GO:0009908 GO:0009987 GO:0010227 GO:0012505 GO:0016043 GO:0016192 GO:0022414 GO:0022607 GO:0030135 GO:0030136 GO:0030276 GO:0030308 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0034622 GO:0035459 GO:0035652 GO:0040008 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045926 GO:0048367 GO:0048437 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060858 GO:0061458 GO:0065003 GO:0065007 GO:0065009 GO:0071840 GO:0090567 GO:0090630 GO:0097708 GO:0098791 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

ArfGap

Protein Analysis

500

Amino Acids

53.61

Weight (kDa)

7.63

Isoelectric Point (pI)

63.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArfGap	PF01412	2 - 110	7.2e-42	Putative GTPase activating protein for Arf

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54310
fragaria_vesca	FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910 FvH4_3g20910
malus_domestica	MD03G1219400.v1.1 MD11G1237500.v1.1
prunus_persica	Prupe.4G189700_v2.0.a1 Prupe.4G189700_v2.0.a1 Prupe.4G189700_v2.0.a1
pyrus_communis	pycom03g16860 pycom11g20880
rosa_chinensis	RchiOBHm_Chr5g0035341
rosa_laevigata	RLG00000007187 RLG00000033618
rosa_multiflora	Rmu_sc0007948.1_g000014
rosa_roxburghii	Rroxscaffold_1G00045060 Rroxscaffold_5G00369750
rosa_rugosa	Rorug04G0221700 Rorug04G0221700 Rorug05G0151300 Rorug05G0151400 Rorug05G0151400
rosa_samantha	Rh4AG278900 Rh4BG284300 Rh5AG244400 Rh5BG243900 Rh5CG275700 Rh5DG252900
rosa_wichuraiana	Rw5G022320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	184
Acc36I	ACCTGC	2 cut(s)	184, 731
AccB7I	CCANNNNNTGG	3 cut(s)	384, 1232, 1367
AciI	CCGC	1 cut(s)	1286
AclWI	GGATC	2 cut(s)	118, 131
AcoI	YGGCCR	1 cut(s)	1223
AcsI	RAATTY	4 cut(s)	286, 427, 440, 1242
AcuI	CTGAAG	2 cut(s)	618, 639
AfaI	GTAC	2 cut(s)	144, 543
AfiI	CCNNNNNNNGG	8 cut(s)	159, 356, 384, 524, 1221, 1232, 1268, 1367
AgsI	TTSAA	4 cut(s)	209, 284, 401, 1063
AjiI	CACGTC	1 cut(s)	362
AjnI	CCWGG	2 cut(s)	1168, 1246
AjuI	GAANNNNNNNTTGG	4 cut(s)	334, 366, 1294, 1326
AloI	GAACNNNNNNTCC	4 cut(s)	1148, 1180, 1299, 1331
AluBI	AGCT	9 cut(s)	470, 614, 705, 722, 1007, 1139, 1335, 1364, 1427
AluI	AGCT	9 cut(s)	470, 614, 705, 722, 1007, 1139, 1335, 1364, 1427
Alw26I	GTCTC	5 cut(s)	140, 385, 474, 993, 1413
AlwI	GGATC	2 cut(s)	118, 131
AlwNI	CAGNNNCTG	2 cut(s)	10, 617
Ama87I	CYCGRG	1 cut(s)	137
AoxI	GGCC	4 cut(s)	78, 527, 1223, 1369
ApoI	RAATTY	4 cut(s)	286, 427, 440, 1242
Asp700I	GAANNNNTTC	1 cut(s)	18
AspS9I	GGNCC	7 cut(s)	68, 78, 527, 547, 1024, 1156, 1289
AsuC2I	CCSGG	2 cut(s)	693, 1038
AsuHPI	GGTGA	6 cut(s)	169, 339, 707, 843, 930, 1395
AvaI	CYCGRG	1 cut(s)	137
AvaII	GGWCC	5 cut(s)	68, 547, 1024, 1156, 1289
BaeGI	GKGCMC	1 cut(s)	1043
BaeI	ACNNNNGTAYC	2 cut(s)	79, 112
BalI	TGGCCA	1 cut(s)	1225
BamHI	GGATCC	1 cut(s)	123
BarI	GAAGNNNNNNTAC	2 cut(s)	237, 269
BbsI	GAAGAC	1 cut(s)	500
BccI	CCATC	4 cut(s)	69, 312, 326, 1262
BciT130I	CCWGG	2 cut(s)	1170, 1248
BclI	TGATCA	1 cut(s)	532
BcnI	CCSGG	2 cut(s)	693, 1038
BcoDI	GTCTC	5 cut(s)	140, 385, 474, 993, 1413
BfaI	CTAG	3 cut(s)	354, 471, 1332
BfmI	CTRYAG	4 cut(s)	1002, 1134, 1263, 1422
BfuAI	ACCTGC	2 cut(s)	184, 731
BlpI	GCTNAGC	2 cut(s)	978, 1107
Bme1390I	CCNGG	4 cut(s)	693, 1038, 1170, 1248
Bme18I	GGWCC	5 cut(s)	68, 547, 1024, 1156, 1289
BmeT110I	CYCGRG	1 cut(s)	137
BmgBI	CACGTC	1 cut(s)	362
BmgT120I	GGNCC	7 cut(s)	68, 78, 527, 547, 1024, 1156, 1289
BmiI	GGNNCC	5 cut(s)	69, 125, 549, 1025, 1290
BmrFI	CCNGG	4 cut(s)	693, 1038, 1170, 1248
BmrI	ACTGGG	1 cut(s)	250
BmsI	GCATC	5 cut(s)	700, 773, 830, 961, 1248
BmuI	ACTGGG	1 cut(s)	250
BpiI	GAAGAC	1 cut(s)	500
BplI	GAGNNNNNCTC	2 cut(s)	689, 721
BpmI	CTGGAG	1 cut(s)	1404
Bpu1102I	GCTNAGC	2 cut(s)	978, 1107
BpuMI	CCSGG	2 cut(s)	693, 1038
BsaI	GGTCTC	1 cut(s)	385
BsaJI	CCNNGG	4 cut(s)	63, 153, 171, 1168
Bsc4I	CCNNNNNNNGG	8 cut(s)	159, 356, 384, 524, 1221, 1232, 1268, 1367
Bse118I	RCCGGY	1 cut(s)	1291
Bse1I	ACTGG	4 cut(s)	81, 245, 748, 783
Bse3DI	GCAATG	1 cut(s)	1104
BseBI	CCWGG	2 cut(s)	1170, 1248
BseDI	CCNNGG	4 cut(s)	63, 153, 171, 1168
BseGI	GGATG	1 cut(s)	1491
BseLI	CCNNNNNNNGG	8 cut(s)	159, 356, 384, 524, 1221, 1232, 1268, 1367
BseMI	GCAATG	1 cut(s)	1104
BseMII	CTCAG	4 cut(s)	693, 720, 992, 1121
BseNI	ACTGG	4 cut(s)	81, 245, 748, 783
BseSI	GKGCMC	1 cut(s)	1043
BseYI	CCCAGC	1 cut(s)	1360
BshFI	GGCC	4 cut(s)	80, 529, 1225, 1371
BsiHKCI	CYCGRG	1 cut(s)	137
BsiSI	CCGG	3 cut(s)	693, 1037, 1292
BslFI	GGGAC	4 cut(s)	533, 675, 1037, 1302
BslI	CCNNNNNNNGG	8 cut(s)	159, 356, 384, 524, 1221, 1232, 1268, 1367
BsmAI	GTCTC	5 cut(s)	140, 385, 474, 993, 1413
BsmBI	CGTCTC	1 cut(s)	1413
BsmFI	GGGAC	4 cut(s)	533, 675, 1037, 1302
BsnI	GGCC	4 cut(s)	80, 529, 1225, 1371
Bso31I	GGTCTC	1 cut(s)	385
BsoBI	CYCGRG	1 cut(s)	137
Bsp1286I	GDGCHC	1 cut(s)	1043
Bsp1407I	TGTACA	1 cut(s)	541
Bsp143I	GATC	2 cut(s)	123, 532
Bsp1720I	GCTNAGC	2 cut(s)	978, 1107
BspACI	CCGC	1 cut(s)	1286
BspANI	GGCC	4 cut(s)	80, 529, 1225, 1371
BspCNI	CTCAG	4 cut(s)	692, 719, 991, 1120
BspLI	GGNNCC	5 cut(s)	69, 125, 549, 1025, 1290
BspMAI	CTGCAG	3 cut(s)	1006, 1138, 1426
BspMI	ACCTGC	2 cut(s)	184, 731
BspPI	GGATC	2 cut(s)	118, 131
BspTNI	GGTCTC	1 cut(s)	385
BsrDI	GCAATG	1 cut(s)	1104
BsrFI	RCCGGY	1 cut(s)	1291
BsrGI	TGTACA	1 cut(s)	541
BsrI	ACTGG	4 cut(s)	81, 245, 748, 783
BssAI	RCCGGY	1 cut(s)	1291
BssECI	CCNNGG	4 cut(s)	63, 153, 171, 1168
BssMI	GATC	2 cut(s)	123, 532
BssT1I	CCWWGG	3 cut(s)	63, 153, 171
Bst2UI	CCWGG	2 cut(s)	1170, 1248
Bst4CI	ACNGT	4 cut(s)	485, 855, 1407, 1500
Bst6I	CTCTTC	2 cut(s)	472, 1474
BstAUI	TGTACA	1 cut(s)	541
BstC8I	GCNNGC	5 cut(s)	110, 612, 674, 1104, 1150
BstDEI	CTNAG	5 cut(s)	91, 679, 706, 978, 1107
BstENI	CCTNNNNNAGG	2 cut(s)	354, 522
BstF5I	GGATG	1 cut(s)	1491
BstKTI	GATC	2 cut(s)	126, 535
BstMAI	GTCTC	5 cut(s)	140, 385, 474, 993, 1413
BstMBI	GATC	2 cut(s)	123, 532
BstNI	CCWGG	2 cut(s)	1170, 1248
BstNSI	RCATGY	2 cut(s)	112, 676
BstSCI	CCNGG	4 cut(s)	691, 1036, 1168, 1246
BstSFI	CTRYAG	4 cut(s)	1002, 1134, 1263, 1422
BstSLI	GKGCMC	1 cut(s)	1043
BstV2I	GAAGAC	1 cut(s)	500
BstX2I	RGATCY	1 cut(s)	123
BstXI	CCANNNNNNTGG	1 cut(s)	1247
BstYI	RGATCY	1 cut(s)	123
BsuRI	GGCC	4 cut(s)	80, 529, 1225, 1371
BtrI	CACGTC	1 cut(s)	362
BtsCI	GGATG	1 cut(s)	1491
BtsI	GCAGTG	2 cut(s)	119, 412
BtsIMutI	CAGTG	4 cut(s)	88, 119, 412, 490
BveI	ACCTGC	2 cut(s)	184, 731
Cac8I	GCNNGC	5 cut(s)	110, 612, 674, 1104, 1150
CaiI	CAGNNNCTG	2 cut(s)	10, 617
Cfr10I	RCCGGY	1 cut(s)	1291
Cfr13I	GGNCC	7 cut(s)	68, 78, 527, 547, 1024, 1156, 1289
Csp6I	GTAC	2 cut(s)	143, 542
CviAII	CATG	8 cut(s)	109, 180, 413, 536, 673, 997, 1126, 1153
CviQI	GTAC	2 cut(s)	143, 542
DdeI	CTNAG	5 cut(s)	91, 679, 706, 978, 1107
DpnI	GATC	2 cut(s)	125, 534
DpnII	GATC	2 cut(s)	123, 532
EaeI	YGGCCR	1 cut(s)	1223
Eam1104I	CTCTTC	2 cut(s)	472, 1474
EarI	CTCTTC	2 cut(s)	472, 1474
Eco130I	CCWWGG	3 cut(s)	63, 153, 171
Eco31I	GGTCTC	1 cut(s)	385
Eco47I	GGWCC	5 cut(s)	68, 547, 1024, 1156, 1289
Eco57I	CTGAAG	2 cut(s)	618, 639
Eco88I	CYCGRG	1 cut(s)	137
EcoNI	CCTNNNNNAGG	2 cut(s)	354, 522
EcoO109I	RGGNCCY	2 cut(s)	527, 547
EcoRII	CCWGG	2 cut(s)	1168, 1246
EcoT14I	CCWWGG	3 cut(s)	63, 153, 171
EcoT22I	ATGCAT	2 cut(s)	110, 954
ErhI	CCWWGG	3 cut(s)	63, 153, 171
Esp3I	CGTCTC	1 cut(s)	1413
FaeI	CATG	8 cut(s)	112, 183, 416, 539, 676, 1000, 1129, 1156
FalI	AAGNNNNNCTT	1 cut(s)	38
FaqI	GGGAC	4 cut(s)	533, 675, 1037, 1302
FatI	CATG	8 cut(s)	108, 179, 412, 535, 672, 996, 1125, 1152
FauI	CCCGC	1 cut(s)	1279
FbaI	TGATCA	1 cut(s)	532
FokI	GGATG	1 cut(s)	1498
FspBI	CTAG	3 cut(s)	354, 471, 1332
GsaI	CCCAGC	1 cut(s)	1364
GsuI	CTGGAG	1 cut(s)	1404
HaeIII	GGCC	4 cut(s)	80, 529, 1225, 1371
HapII	CCGG	3 cut(s)	693, 1037, 1292
Hin1II	CATG	8 cut(s)	112, 183, 416, 539, 676, 1000, 1129, 1156
HinfI	GANTC	5 cut(s)	7, 501, 828, 848, 910
HpaII	CCGG	3 cut(s)	693, 1037, 1292
HphI	GGTGA	6 cut(s)	169, 339, 707, 843, 930, 1395
Hpy166II	GTNNAC	5 cut(s)	88, 145, 788, 1208, 1390
Hpy188I	TCNGA	3 cut(s)	433, 570, 709
Hpy188III	TCNNGA	3 cut(s)	11, 354, 825
Hpy8I	GTNNAC	5 cut(s)	88, 145, 788, 1208, 1390
HpyAV	CCTTC	4 cut(s)	8, 360, 797, 1089
HpyCH4III	ACNGT	4 cut(s)	485, 855, 1407, 1500
HpyCH4IV	ACGT	2 cut(s)	361, 1328
HpyF3I	CTNAG	5 cut(s)	91, 679, 706, 978, 1107
HpySE526I	ACGT	2 cut(s)	361, 1328
Hsp92II	CATG	8 cut(s)	112, 183, 416, 539, 676, 1000, 1129, 1156
Ksp22I	TGATCA	1 cut(s)	532
Kzo9I	GATC	2 cut(s)	123, 532
LweI	GCATC	5 cut(s)	700, 773, 830, 961, 1248
MaeI	CTAG	3 cut(s)	354, 471, 1332
MaeII	ACGT	2 cut(s)	361, 1328
MaeIII	GTNAC	3 cut(s)	236, 936, 1401
MalI	GATC	2 cut(s)	125, 534
MboI	GATC	2 cut(s)	123, 532
MboII	GAAGA	7 cut(s)	320, 466, 489, 500, 510, 1422, 1461
MflI	RGATCY	1 cut(s)	123
MhlI	GDGCHC	1 cut(s)	1043
MlsI	TGGCCA	1 cut(s)	1225
MluCI	AATT	7 cut(s)	26, 286, 427, 440, 771, 1072, 1242
MluNI	TGGCCA	1 cut(s)	1225
MlyI	GAGTC	1 cut(s)	919
MmeI	TCCRAC	3 cut(s)	1325, 1349, 1436
MnlI	CCTC	9 cut(s)	153, 267, 350, 358, 439, 528, 648, 826, 1222
Mox20I	TGGCCA	1 cut(s)	1225
Mph1103I	ATGCAT	2 cut(s)	110, 954
MroXI	GAANNNNTTC	1 cut(s)	18
MscI	TGGCCA	1 cut(s)	1225
MseI	TTAA	4 cut(s)	24, 860, 894, 1475
MslI	CAYNNNNRTG	1 cut(s)	417
Msp20I	TGGCCA	1 cut(s)	1225
MspA1I	CMGCKG	3 cut(s)	614, 722, 1286
MspI	CCGG	3 cut(s)	693, 1037, 1292
MspR9I	CCNGG	4 cut(s)	693, 1038, 1170, 1248
MvaI	CCWGG	2 cut(s)	1170, 1248
NciI	CCSGG	2 cut(s)	693, 1038
NdeII	GATC	2 cut(s)	123, 532
NlaIII	CATG	8 cut(s)	112, 183, 416, 539, 676, 1000, 1129, 1156
NlaIV	GGNNCC	5 cut(s)	69, 125, 549, 1025, 1290
NmuCI	GTSAC	2 cut(s)	936, 1401
NsiI	ATGCAT	2 cut(s)	110, 954
NspI	RCATGY	2 cut(s)	112, 676
PaeI	GCATGC	2 cut(s)	112, 676
PaqCI	CACCTGC	1 cut(s)	184
PdmI	GAANNNNTTC	1 cut(s)	18
PfeI	GAWTC	4 cut(s)	7, 501, 828, 848
PflMI	CCANNNNNTGG	3 cut(s)	384, 1232, 1367
PfoI	TCCNGGA	1 cut(s)	1246
PleI	GAGTC	1 cut(s)	918
PpsI	GAGTC	1 cut(s)	918
PpuMI	RGGWCCY	1 cut(s)	547
Psp5II	RGGWCCY	1 cut(s)	547
Psp6I	CCWGG	2 cut(s)	1168, 1246
PspFI	CCCAGC	1 cut(s)	1360
PspGI	CCWGG	2 cut(s)	1168, 1246
PspN4I	GGNNCC	5 cut(s)	69, 125, 549, 1025, 1290
PspPI	GGNCC	7 cut(s)	68, 78, 527, 547, 1024, 1156, 1289
PspPPI	RGGWCCY	1 cut(s)	547
PstI	CTGCAG	3 cut(s)	1006, 1138, 1426
PstNI	CAGNNNCTG	2 cut(s)	10, 617
PsuI	RGATCY	1 cut(s)	123
PvuII	CAGCTG	2 cut(s)	614, 722
RsaI	GTAC	2 cut(s)	144, 543
RsaNI	GTAC	2 cut(s)	143, 542
RseI	CAYNNNNRTG	1 cut(s)	417
SaqAI	TTAA	4 cut(s)	24, 860, 894, 1475
Sau3AI	GATC	2 cut(s)	123, 532
Sau96I	GGNCC	7 cut(s)	68, 78, 527, 547, 1024, 1156, 1289
SchI	GAGTC	1 cut(s)	919
ScrFI	CCNGG	4 cut(s)	693, 1038, 1170, 1248
SduI	GDGCHC	1 cut(s)	1043
SfaNI	GCATC	5 cut(s)	700, 773, 830, 961, 1248
SfcI	CTRYAG	4 cut(s)	1002, 1134, 1263, 1422
SinI	GGWCC	5 cut(s)	68, 547, 1024, 1156, 1289
SmiMI	CAYNNNNRTG	1 cut(s)	417
SphI	GCATGC	2 cut(s)	112, 676
Sse9I	AATT	7 cut(s)	26, 286, 427, 440, 771, 1072, 1242
SsiI	CCGC	1 cut(s)	1286
SspMI	CTAG	3 cut(s)	354, 471, 1332
StyD4I	CCNGG	4 cut(s)	691, 1036, 1168, 1246
StyI	CCWWGG	3 cut(s)	63, 153, 171
TaaI	ACNGT	4 cut(s)	485, 855, 1407, 1500
TaiI	ACGT	2 cut(s)	364, 1331
TaqI	TCGA	1 cut(s)	831
TasI	AATT	7 cut(s)	26, 286, 427, 440, 771, 1072, 1242
TatI	WGTACW	1 cut(s)	541
TfiI	GAWTC	4 cut(s)	7, 501, 828, 848
Tru1I	TTAA	4 cut(s)	24, 860, 894, 1475
Tru9I	TTAA	4 cut(s)	24, 860, 894, 1475
TscAI	CASTG	4 cut(s)	88, 119, 412, 490
TseFI	GTSAC	2 cut(s)	936, 1401
Tsp45I	GTSAC	2 cut(s)	936, 1401
TspDTI	ATGAA	4 cut(s)	237, 321, 774, 985
TspRI	CASTG	4 cut(s)	88, 119, 412, 490
Van91I	CCANNNNNTGG	3 cut(s)	384, 1232, 1367
VpaK11BI	GGWCC	5 cut(s)	68, 547, 1024, 1156, 1289
XagI	CCTNNNNNAGG	2 cut(s)	354, 522
XapI	RAATTY	4 cut(s)	286, 427, 440, 1242
XbaI	TCTAGA	1 cut(s)	353
XceI	RCATGY	2 cut(s)	112, 676
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1166
XmnI	GAANNNNTTC	1 cut(s)	18
XspI	CTAG	3 cut(s)	354, 471, 1332
Zsp2I	ATGCAT	2 cut(s)	110, 954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.