Prupe.4G208600_v2.0.a1
ERF Family

Belongs to the calycin superfamily. Lipocalin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0009620
Physical Location & Seq
Forward (+)
12995987 .. 12999311
3325 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G208600.4

Sequence Viewer

Length: 1014 bp
ATGGTACATGCTCTGGTTCAAACAGCACCACTTCTCCTCCAAGGTTCTCCTTCTCCTCCTCCCCATGTCTCTAACTGTAGGGGAGTGCCTGGTAAAATAATGATGAAGTGCTGTTCAGAGCAATCTATCAGCAGCAAGCCTCTGACCAGACATGTTTTATCTAGCTTTGCTGCAACGTTAGTATTTGTCTCTCAAATAAACCAGGCTGTTGCATCAGATGCTTCCCATCAACGAAATATTTATGAGCTCGCAAATGCCCCTGAAAAGACAGTTACTCTTCCGCTTGATAAGGGATCTGATGAAGGAGGTGAGAAGCTAATGATGATGAGAGGCATGACTGCAAATAATTTCAACCCTATTAGATATTCTGGAAGGTGGTTTGAAGTTGCTTCGCTGAAACGTGGATTTTCTGGGCAAGGTCAGGAAGACTGCCACTGCACCCAGGGTGTGTATACATTTGATATGGAGAAACGGGCCATCCAGGTTGATACCTTCTGTGTTCATGGTAGCCCTGATGGATATATTACTGGCATAAGGGGAAATGTTCAATGCCTTTCGGAAGAAGATTTGGAAAAAAATGAGACGGTCCTAGAAAAGCAAGAGATGATCAAAGAGAAGTGTTACCTCCGTTTTCCAACATTGCCTTTCATCCCGAAGCAGCCATATGATGTGATTGCAACTGATTATGACAATTTTGCGCTTGTTTCAGGATCAAAAGATAGGAGTTTTATACAGATTTACTCCAGAACGCCTAATCCTGGTCCTGAATTCATAGAGAAGTACAAATTTTACTTGGCCAACTTCGGATATGACCCAAGCAAAATCACGGACACCCCACAAGACTGTCAATCAATGACAGATAGTCGGTTAACTGCAATGATGTCCATGTCCGAAATGCAACAGGCTTTAACAAATCAATTTCCTGCTCTGGAATTGAAGCGCTCTGTCCAGTTTGATCCCTTTACGAGTGTATTTGACACTCTAAAGAAGCTTGTGCAGCTTTATTTTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0001101 GO:0001817 GO:0001818 GO:0001952 GO:0001953 GO:0002682 GO:0002683 GO:0002685 GO:0002686 GO:0003006 GO:0003674 GO:0005488 GO:0005496 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0005975 GO:0005996 GO:0006006 GO:0006629 GO:0006950 GO:0006979 GO:0007162 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0007568 GO:0008150 GO:0008152 GO:0008285 GO:0008289 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009611 GO:0009628 GO:0009635 GO:0009636 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010117 GO:0010154 GO:0010431 GO:0010565 GO:0010605 GO:0010640 GO:0010642 GO:0010646 GO:0010648 GO:0010810 GO:0010812 GO:0012505 GO:0014012 GO:0015485 GO:0016020 GO:0016043 GO:0019216 GO:0019217 GO:0019222 GO:0019318 GO:0021700 GO:0022008 GO:0022414 GO:0022626 GO:0023051 GO:0023057 GO:0030030 GO:0030154 GO:0030155 GO:0030182 GO:0030334 GO:0030336 GO:0030425 GO:0031099 GO:0031102 GO:0031103 GO:0031175 GO:0031323 GO:0031324 GO:0031347 GO:0031348 GO:0031976 GO:0031977 GO:0031984 GO:0032101 GO:0032102 GO:0032386 GO:0032387 GO:0032501 GO:0032502 GO:0032504 GO:0032642 GO:0032682 GO:0032879 GO:0032880 GO:0032934 GO:0032991 GO:0033157 GO:0033554 GO:0033993 GO:0034357 GO:0034442 GO:0034443 GO:0036094 GO:0036477 GO:0040007 GO:0040012 GO:0040013 GO:0042060 GO:0042127 GO:0042221 GO:0042246 GO:0042306 GO:0042308 GO:0042493 GO:0042651 GO:0042995 GO:0043005 GO:0043025 GO:0043178 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044087 GO:0044238 GO:0044281 GO:0044297 GO:0044421 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044445 GO:0044446 GO:0044463 GO:0044464 GO:0045833 GO:0045922 GO:0046320 GO:0046322 GO:0046822 GO:0046823 GO:0048316 GO:0048468 GO:0048471 GO:0048513 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048609 GO:0048660 GO:0048662 GO:0048666 GO:0048678 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050727 GO:0050728 GO:0050746 GO:0050748 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051223 GO:0051224 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051270 GO:0051271 GO:0051716 GO:0051893 GO:0051895 GO:0055035 GO:0060255 GO:0060322 GO:0060341 GO:0060587 GO:0060588 GO:0061458 GO:0061564 GO:0062012 GO:0062014 GO:0065007 GO:0070201 GO:0071637 GO:0071638 GO:0071695 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090087 GO:0090109 GO:0090317 GO:0097159 GO:0097305 GO:0097447 GO:0097458 GO:0120025 GO:0120036 GO:0120038 GO:1900015 GO:1900016 GO:1900180 GO:1900181 GO:1901562 GO:1901700 GO:1901888 GO:1901889 GO:1903391 GO:1903392 GO:1903827 GO:1903828 GO:1904589 GO:1904590 GO:1904950 GO:1990904 GO:2000097 GO:2000098 GO:2000145 GO:2000146 GO:2000401 GO:2000402 GO:2000404 GO:2000405
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipocalin_2

Protein Analysis

338

Amino Acids

37.89

Weight (kDa)

6.33

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 452
AciI CCGC 1 cut(s) 281
AclI AACGTT 1 cut(s) 176
AclWI GGATC 3 cut(s) 301, 718, 950
AcoI YGGCCR 1 cut(s) 795
AcsI RAATTY 2 cut(s) 767, 785
AfaI GTAC 2 cut(s) 6, 782
AfeI AGCGCT 1 cut(s) 941
AfiI CCNNNNNNNGG 1 cut(s) 758
AflIII ACRYGT 1 cut(s) 151
AgsI TTSAA 5 cut(s) 20, 352, 383, 548, 937
AhdI GACNNNNNGTC 1 cut(s) 861
AjnI CCWGG 5 cut(s) 88, 201, 441, 480, 757
AloI GAACNNNNNNTCC 2 cut(s) 739, 771
AluBI AGCT 5 cut(s) 165, 247, 316, 991, 1000
AluI AGCT 5 cut(s) 165, 247, 316, 991, 1000
Alw21I GWGCWC 1 cut(s) 249
Alw26I GTCTC 3 cut(s) 73, 193, 575
AlwI GGATC 3 cut(s) 301, 718, 950
Aor51HI AGCGCT 1 cut(s) 941
AoxI GGCC 2 cut(s) 474, 795
ApeKI GCWGC 4 cut(s) 132, 170, 658, 997
ApoI RAATTY 2 cut(s) 767, 785
AspLEI GCGC 2 cut(s) 700, 942
AspS9I GGNCC 3 cut(s) 474, 586, 761
AsuHPI GGTGA 1 cut(s) 320
AvaII GGWCC 2 cut(s) 586, 761
BalI TGGCCA 1 cut(s) 797
BanII GRGCYC 1 cut(s) 249
BbsI GAAGAC 1 cut(s) 432
Bbv12I GWGCWC 1 cut(s) 249
BbvI GCAGC 4 cut(s) 144, 157, 670, 1009
BccI CCATC 3 cut(s) 234, 485, 509
BciT130I CCWGG 5 cut(s) 90, 203, 443, 482, 759
BclI TGATCA 1 cut(s) 606
BcoDI GTCTC 3 cut(s) 73, 193, 575
BfaI CTAG 2 cut(s) 162, 590
BfmI CTRYAG 1 cut(s) 76
BfoI RGCGCY 1 cut(s) 943
BisI GCNGC 4 cut(s) 133, 171, 659, 998
BlsI GCNGC 4 cut(s) 134, 172, 660, 999
Bme1390I CCNGG 5 cut(s) 90, 203, 443, 482, 759
Bme18I GGWCC 2 cut(s) 586, 761
BmeRI GACNNNNNGTC 1 cut(s) 861
BmgT120I GGNCC 3 cut(s) 474, 586, 761
BmrFI CCNGG 5 cut(s) 90, 203, 443, 482, 759
BmsI GCATC 2 cut(s) 208, 221
BpiI GAAGAC 1 cut(s) 432
BpmI CTGGAG 1 cut(s) 727
BsaJI CCNNGG 3 cut(s) 40, 441, 442
BsaXI ACNNNNNCTCC 4 cut(s) 18, 21, 48, 51
Bsc4I CCNNNNNNNGG 1 cut(s) 758
Bse1I ACTGG 2 cut(s) 532, 949
Bse3DI GCAATG 2 cut(s) 638, 882
BseBI CCWGG 5 cut(s) 90, 203, 443, 482, 759
BseDI CCNNGG 3 cut(s) 40, 441, 442
BseGI GGATG 2 cut(s) 477, 648
BseLI CCNNNNNNNGG 1 cut(s) 758
BseMI GCAATG 2 cut(s) 638, 882
BseNI ACTGG 2 cut(s) 532, 949
BseRI GAGGAG 3 cut(s) 26, 45, 48
BseXI GCAGC 4 cut(s) 144, 157, 670, 1009
BsgI GTGCAG 1 cut(s) 421
BshFI GGCC 2 cut(s) 476, 797
BsiHKAI GWGCWC 1 cut(s) 249
BslI CCNNNNNNNGG 1 cut(s) 758
BsmAI GTCTC 3 cut(s) 73, 193, 575
BsmBI CGTCTC 1 cut(s) 575
BsnI GGCC 2 cut(s) 476, 797
Bsp1286I GDGCHC 1 cut(s) 249
Bsp143I GATC 4 cut(s) 293, 606, 710, 955
BspACI CCGC 1 cut(s) 281
BspANI GGCC 2 cut(s) 476, 797
BspPI GGATC 3 cut(s) 301, 718, 950
BsrDI GCAATG 2 cut(s) 638, 882
BsrI ACTGG 2 cut(s) 532, 949
BssECI CCNNGG 3 cut(s) 40, 441, 442
BssMI GATC 4 cut(s) 293, 606, 710, 955
BssNAI GTATAC 1 cut(s) 453
BssT1I CCWWGG 1 cut(s) 40
Bst1107I GTATAC 1 cut(s) 453
Bst2UI CCWGG 5 cut(s) 90, 203, 443, 482, 759
Bst4CI ACNGT 4 cut(s) 77, 271, 586, 845
Bst6I CTCTTC 1 cut(s) 282
BstAPI GCANNNNNTGC 1 cut(s) 218
BstC8I GCNNGC 2 cut(s) 137, 249
BstF5I GGATG 2 cut(s) 477, 648
BstH2I RGCGCY 1 cut(s) 943
BstHHI GCGC 2 cut(s) 700, 942
BstKTI GATC 4 cut(s) 296, 609, 713, 958
BstMAI GTCTC 3 cut(s) 73, 193, 575
BstMBI GATC 4 cut(s) 293, 606, 710, 955
BstMWI GCNNNNNNNGC 2 cut(s) 218, 997
BstNI CCWGG 5 cut(s) 90, 203, 443, 482, 759
BstNSI RCATGY 2 cut(s) 11, 155
BstSCI CCNGG 5 cut(s) 88, 201, 441, 480, 757
BstSFI CTRYAG 1 cut(s) 76
BstV1I GCAGC 4 cut(s) 144, 157, 670, 1009
BstV2I GAAGAC 1 cut(s) 432
BstX2I RGATCY 1 cut(s) 293
BstYI RGATCY 1 cut(s) 293
BstZ17I GTATAC 1 cut(s) 453
BsuRI GGCC 2 cut(s) 476, 797
BtsCI GGATG 2 cut(s) 477, 648
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 1 cut(s) 433
Cac8I GCNNGC 2 cut(s) 137, 249
CfoI GCGC 2 cut(s) 700, 942
Cfr13I GGNCC 3 cut(s) 474, 586, 761
Csp6I GTAC 2 cut(s) 5, 781
CviAII CATG 6 cut(s) 8, 65, 152, 334, 503, 886
CviQI GTAC 2 cut(s) 5, 781
DpnI GATC 4 cut(s) 295, 608, 712, 957
DpnII GATC 4 cut(s) 293, 606, 710, 955
DriI GACNNNNNGTC 1 cut(s) 861
EaeI YGGCCR 1 cut(s) 795
Eam1104I CTCTTC 1 cut(s) 282
Eam1105I GACNNNNNGTC 1 cut(s) 861
EarI CTCTTC 1 cut(s) 282
Ecl136II GAGCTC 1 cut(s) 247
Eco130I CCWWGG 1 cut(s) 40
Eco24I GRGCYC 1 cut(s) 249
Eco47I GGWCC 2 cut(s) 586, 761
Eco47III AGCGCT 1 cut(s) 941
Eco53kI GAGCTC 1 cut(s) 247
EcoICRI GAGCTC 1 cut(s) 247
EcoRI GAATTC 1 cut(s) 767
EcoRII CCWGG 5 cut(s) 88, 201, 441, 480, 757
EcoT14I CCWWGG 1 cut(s) 40
EcoT38I GRGCYC 1 cut(s) 249
ErhI CCWWGG 1 cut(s) 40
Esp3I CGTCTC 1 cut(s) 575
FaeI CATG 6 cut(s) 11, 68, 155, 337, 506, 889
FatI CATG 6 cut(s) 7, 64, 151, 333, 502, 885
FauNDI CATATG 1 cut(s) 664
FbaI TGATCA 1 cut(s) 606
FblI GTMKAC 1 cut(s) 452
Fnu4HI GCNGC 4 cut(s) 133, 171, 659, 998
FokI GGATG 2 cut(s) 464, 635
FriOI GRGCYC 1 cut(s) 249
Fsp4HI GCNGC 4 cut(s) 133, 171, 659, 998
FspBI CTAG 2 cut(s) 162, 590
GlaI GCGC 2 cut(s) 699, 941
GluI GCNGC 4 cut(s) 133, 171, 659, 998
GsuI CTGGAG 1 cut(s) 727
HaeII RGCGCY 1 cut(s) 943
HaeIII GGCC 2 cut(s) 476, 797
HhaI GCGC 2 cut(s) 700, 942
Hin1II CATG 6 cut(s) 11, 68, 155, 337, 506, 889
Hin6I GCGC 2 cut(s) 698, 940
HinP1I GCGC 2 cut(s) 698, 940
HincII GTYRAC 1 cut(s) 870
HindII GTYRAC 1 cut(s) 870
HindIII AAGCTT 1 cut(s) 989
HpaI GTTAAC 1 cut(s) 870
HphI GGTGA 1 cut(s) 320
Hpy166II GTNNAC 2 cut(s) 453, 870
Hpy188I TCNGA 7 cut(s) 118, 144, 217, 298, 559, 806, 892
Hpy188III TCNNGA 7 cut(s) 369, 422, 652, 708, 744, 764, 929
Hpy8I GTNNAC 2 cut(s) 453, 870
HpyAV CCTTC 4 cut(s) 60, 296, 366, 502
HpyCH4III ACNGT 4 cut(s) 77, 271, 586, 845
HpyCH4IV ACGT 2 cut(s) 176, 400
HpyCH4V TGCA 8 cut(s) 173, 212, 341, 438, 677, 875, 898, 997
HpyF10VI GCNNNNNNNGC 2 cut(s) 218, 997
HpySE526I ACGT 2 cut(s) 176, 400
Hsp92II CATG 6 cut(s) 11, 68, 155, 337, 506, 889
HspAI GCGC 2 cut(s) 698, 940
Ksp22I TGATCA 1 cut(s) 606
KspAI GTTAAC 1 cut(s) 870
Kzo9I GATC 4 cut(s) 293, 606, 710, 955
Lsp1109I GCAGC 4 cut(s) 144, 157, 670, 1009
LweI GCATC 2 cut(s) 208, 221
MaeI CTAG 2 cut(s) 162, 590
MaeII ACGT 2 cut(s) 176, 400
MaeIII GTNAC 2 cut(s) 271, 620
MalI GATC 4 cut(s) 295, 608, 712, 957
MboI GATC 4 cut(s) 293, 606, 710, 955
MboII GAAGA 4 cut(s) 269, 437, 572, 575
MflI RGATCY 1 cut(s) 293
MhlI GDGCHC 1 cut(s) 249
MlsI TGGCCA 1 cut(s) 797
MluCI AATT 6 cut(s) 346, 691, 767, 785, 917, 932
MluNI TGGCCA 1 cut(s) 797
MmeI TCCRAC 1 cut(s) 659
MnlI CCTC 7 cut(s) 47, 66, 69, 150, 299, 323, 635
Mox20I TGGCCA 1 cut(s) 797
MscI TGGCCA 1 cut(s) 797
MseI TTAA 3 cut(s) 869, 908, 1008
Msp20I TGGCCA 1 cut(s) 797
MspR9I CCNGG 5 cut(s) 90, 203, 443, 482, 759
MvaI CCWGG 5 cut(s) 90, 203, 443, 482, 759
MwoI GCNNNNNNNGC 2 cut(s) 218, 997
NdeI CATATG 1 cut(s) 664
NdeII GATC 4 cut(s) 293, 606, 710, 955
NlaIII CATG 6 cut(s) 11, 68, 155, 337, 506, 889
NspI RCATGY 2 cut(s) 11, 155
PasI CCCWGGG 1 cut(s) 442
PciI ACATGT 1 cut(s) 151
PkrI GCNGC 4 cut(s) 134, 172, 660, 999
PscI ACATGT 1 cut(s) 151
Psp124BI GAGCTC 1 cut(s) 249
Psp1406I AACGTT 1 cut(s) 176
Psp6I CCWGG 5 cut(s) 88, 201, 441, 480, 757
PspGI CCWGG 5 cut(s) 88, 201, 441, 480, 757
PspPI GGNCC 3 cut(s) 474, 586, 761
PsuI RGATCY 1 cut(s) 293
RsaI GTAC 2 cut(s) 6, 782
RsaNI GTAC 2 cut(s) 5, 781
SacI GAGCTC 1 cut(s) 249
SaqAI TTAA 3 cut(s) 869, 908, 1008
SatI GCNGC 4 cut(s) 133, 171, 659, 998
Sau3AI GATC 4 cut(s) 293, 606, 710, 955
Sau96I GGNCC 3 cut(s) 474, 586, 761
ScrFI CCNGG 5 cut(s) 90, 203, 443, 482, 759
SduI GDGCHC 1 cut(s) 249
SfaNI GCATC 2 cut(s) 208, 221
SfcI CTRYAG 1 cut(s) 76
SinI GGWCC 2 cut(s) 586, 761
Sse9I AATT 6 cut(s) 346, 691, 767, 785, 917, 932
SsiI CCGC 1 cut(s) 281
SspI AATATT 1 cut(s) 238
SspMI CTAG 2 cut(s) 162, 590
SstI GAGCTC 1 cut(s) 249
StyD4I CCNGG 5 cut(s) 88, 201, 441, 480, 757
StyI CCWWGG 1 cut(s) 40
TaaI ACNGT 4 cut(s) 77, 271, 586, 845
TaiI ACGT 2 cut(s) 179, 403
TasI AATT 6 cut(s) 346, 691, 767, 785, 917, 932
TatI WGTACW 1 cut(s) 780
Tru1I TTAA 3 cut(s) 869, 908, 1008
Tru9I TTAA 3 cut(s) 869, 908, 1008
TscAI CASTG 1 cut(s) 440
TseI GCWGC 4 cut(s) 132, 170, 658, 997
TspDTI ATGAA 5 cut(s) 119, 315, 491, 637, 760
TspGWI ACGGA 2 cut(s) 617, 842
TspRI CASTG 1 cut(s) 440
VpaK11BI GGWCC 2 cut(s) 586, 761
XapI RAATTY 2 cut(s) 767, 785
XceI RCATGY 2 cut(s) 11, 155
XmiI GTMKAC 1 cut(s) 452
XspI CTAG 2 cut(s) 162, 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.