Rorug05G0169900
ERF Family

Belongs to the calycin superfamily. Lipocalin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0009620
Physical Location & Seq
Reverse (-)
15797791 .. 15799951
2161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0169900.1

Sequence Viewer

Length: 1617 bp
ATGACTGTGCGACCTGTAATGTTGCCGCTACAGAAGACCCAAATGAATGGGTTAGCTAGACAAGCAGAGCGTTTAGTTTCACGAACCGAAAGCTTTAATTTATTGACGTTTTTCATTAGGGGTAGAAGAACATACATGAAACCCCATTACAGAAACTCCTATGATTACACAGACTTGCTTCGACATTGCGGAAACACCAAATCAATCAAGAAACTCCACGCCCAGATCATCATCGGAGGTCTACACCAAAACCCATTTGTGGCTTCAAAGCTAGTAGGCAAGTACGTGGAGTGTGGTGACTCAAGTATGGGAGATGCACGGAAGGTGTTCGATGAATTGACTGAGAGAGATGTGTTTGTATGGAACATGGTCATTCAGGGTTATGCAAATGTTGGTCCTTTTGCTGAAGCCCTTAAAATGTGTAATAGAATGAGGCTGAGTGGGTTATCCCCAAATCGGTACACTTACCCTTTTGTGCTTAAGGCTTGTGGAGCAATGAGAGATGGAAAGCAGGGTCAGGTTGTTCATGGGCAGATTGTGAAATCTGGGCTTGACTTGCAGTTGTTTGTGGGGAATGCTCTTGTGGCATTGTATTCTAAGTATGAGGAAATTGAGGTATCGAGACGAGTGTTCGATGAATTGCCTCTGAAAGATCTTGTTAGTTGGAATTCCATGATTTCGGGGTATGCCACGAATGGATACCCGAATGAGGCTGTTGAAATTTTTCATGCAATGATACAAGGTCCTACTACATGCTTGCCTGACCATGCCACTCTGGTTTGCGTGCTTCCGGCTTGTGTTGAAGCATCTGCTATTGAAGTTGGGTTTTGGATTCATTCTTACATTGTGAAGACGAGTATAAAAGTTGATTCTGCTCTGGGCAGTGCTCTCATTTCAATGTATGCAAACTGTGGTCGTGTAAGAGTTTCCAGAGTTATCTTTGATCGAGTAAGTGATAAGAATGTGGTGCTGTGGAGCGCCATGATGAGGTGTTATGGAATGCATGGGCACGCAGACGAGGTGCTCCAGATGTTTTCGCAGTTTGAGGAGTCAGCCTTACATCCAGATGCTGTTGTGCTTTTGTGTTTGTTGTCCACTTGTAGTCACGCAGGGATGGTTTCAAAAGGCTTGGAAATTTTTGAAAAAATGGAAGATTACGGAGTAGAGAAAAACGAGAAGCATTATGCTTGCATTGTAGACCTTCTGGGAAGAGCTGGGTTACTTGACCGGGCAGTTAAGTTTATTGAAAGCATGCCCATGCAGGCAGGGAAAGATGTATACGGTGCACTACTTGGAGCTTGTAGGATACATAATAACATAAAACTTGCCGAAGAAACTGCAGAGAAATTGTTTGTTTTGGATCCTGGAAATGCTGGGAGGTATATTCTTCTGGCCAGCATGTATGAAGACGCAGGGCGATGGGAAGATGCAGCTAGAGTGAGGAGGCTAATCAGAGAGAAGAACATCAAGAAGCCAACTGGACGTAGTTCGATTGAGGTGGATTGCATCTATCACACATTTGGAGCTGATGATGAGTCTCACCCATATACAGACCAGATATTTGACACATTGGAGAGATTGGATAGGATAATGGAAGAAGCCATAGTAATGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0001101 GO:0001817 GO:0001818 GO:0001952 GO:0001953 GO:0002682 GO:0002683 GO:0002685 GO:0002686 GO:0003006 GO:0003674 GO:0005488 GO:0005496 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0005975 GO:0005996 GO:0006006 GO:0006629 GO:0006950 GO:0006979 GO:0007162 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0007568 GO:0008150 GO:0008152 GO:0008285 GO:0008289 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009611 GO:0009628 GO:0009635 GO:0009636 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010117 GO:0010154 GO:0010431 GO:0010565 GO:0010605 GO:0010640 GO:0010642 GO:0010646 GO:0010648 GO:0010810 GO:0010812 GO:0012505 GO:0014012 GO:0015485 GO:0016020 GO:0016043 GO:0019216 GO:0019217 GO:0019222 GO:0019318 GO:0021700 GO:0022008 GO:0022414 GO:0022626 GO:0023051 GO:0023057 GO:0030030 GO:0030154 GO:0030155 GO:0030182 GO:0030334 GO:0030336 GO:0030425 GO:0031099 GO:0031102 GO:0031103 GO:0031175 GO:0031323 GO:0031324 GO:0031347 GO:0031348 GO:0031976 GO:0031977 GO:0031984 GO:0032101 GO:0032102 GO:0032386 GO:0032387 GO:0032501 GO:0032502 GO:0032504 GO:0032642 GO:0032682 GO:0032879 GO:0032880 GO:0032934 GO:0032991 GO:0033157 GO:0033554 GO:0033993 GO:0034357 GO:0034442 GO:0034443 GO:0036094 GO:0036477 GO:0040007 GO:0040012 GO:0040013 GO:0042060 GO:0042127 GO:0042221 GO:0042246 GO:0042306 GO:0042308 GO:0042493 GO:0042651 GO:0042995 GO:0043005 GO:0043025 GO:0043178 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044087 GO:0044238 GO:0044281 GO:0044297 GO:0044421 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044445 GO:0044446 GO:0044463 GO:0044464 GO:0045833 GO:0045922 GO:0046320 GO:0046322 GO:0046822 GO:0046823 GO:0048316 GO:0048468 GO:0048471 GO:0048513 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048609 GO:0048660 GO:0048662 GO:0048666 GO:0048678 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050727 GO:0050728 GO:0050746 GO:0050748 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051223 GO:0051224 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051270 GO:0051271 GO:0051716 GO:0051893 GO:0051895 GO:0055035 GO:0060255 GO:0060322 GO:0060341 GO:0060587 GO:0060588 GO:0061458 GO:0061564 GO:0062012 GO:0062014 GO:0065007 GO:0070201 GO:0071637 GO:0071638 GO:0071695 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090087 GO:0090109 GO:0090317 GO:0097159 GO:0097305 GO:0097447 GO:0097458 GO:0120025 GO:0120036 GO:0120038 GO:1900015 GO:1900016 GO:1900180 GO:1900181 GO:1901562 GO:1901700 GO:1901888 GO:1901889 GO:1903391 GO:1903392 GO:1903827 GO:1903828 GO:1904589 GO:1904590 GO:1904950 GO:1990904 GO:2000097 GO:2000098 GO:2000145 GO:2000146 GO:2000401 GO:2000402 GO:2000404 GO:2000405
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipocalin_2

Protein Analysis

538

Amino Acids

60.48

Weight (kDa)

6.96

Isoelectric Point (pI)

41.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 116 - 163 1.3e-10 PPR repeat family
PPR_3 PF13812 116 - 165 8.3e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 218 - 266 1.2e-06 PPR repeat family
PPR PF01535 220 - 246 1.5e-07 PPR repeat
E_motif PF20431 437 - 499 8.2e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 241, 1197, 1278
AciI CCGC 2 cut(s) 26, 189
AclWI GGATC 2 cut(s) 1355, 1368
AcoI YGGCCR 1 cut(s) 1392
AcsI RAATTY 3 cut(s) 667, 720, 1134
AcuI CTGAAG 1 cut(s) 426
AfaI GTAC 2 cut(s) 284, 461
AfiI CCNNNNNNNGG 4 cut(s) 259, 456, 709, 987
AflII CTTAAG 1 cut(s) 479
AgsI TTSAA 8 cut(s) 267, 719, 803, 818, 897, 1122, 1142, 1247
AjnI CCWGG 1 cut(s) 1363
AluBI AGCT 7 cut(s) 56, 93, 271, 1214, 1298, 1433, 1526
AluI AGCT 7 cut(s) 56, 93, 271, 1214, 1298, 1433, 1526
Alw21I GWGCWC 3 cut(s) 889, 1026, 1288
Alw26I GTCTC 2 cut(s) 616, 1542
Alw44I GTGCAC 1 cut(s) 1284
AlwI GGATC 2 cut(s) 1355, 1368
AlwNI CAGNNNCTG 1 cut(s) 1070
AoxI GGCC 1 cut(s) 1392
ApaLI GTGCAC 1 cut(s) 1284
ApeKI GCWGC 1 cut(s) 1430
ApoI RAATTY 3 cut(s) 667, 720, 1134
ArsI GACNNNNNNTTYG 2 cut(s) 1544, 1576
Asp700I GAANNNNTTC 2 cut(s) 326, 723
AspLEI GCGC 1 cut(s) 980
AspS9I GGNCC 2 cut(s) 395, 743
AsuC2I CCSGG 1 cut(s) 1229
AsuHPI GGTGA 2 cut(s) 308, 1532
AvaII GGWCC 2 cut(s) 395, 743
BaeGI GKGCMC 2 cut(s) 1011, 1288
BalI TGGCCA 1 cut(s) 1394
BamHI GGATCC 1 cut(s) 1360
BbsI GAAGAC 3 cut(s) 41, 857, 1413
Bbv12I GWGCWC 3 cut(s) 889, 1026, 1288
BbvI GCAGC 1 cut(s) 1442
BccI CCATC 3 cut(s) 497, 1108, 1413
BcgI CGANNNNNNTGC 2 cut(s) 1319, 1353
BciT130I CCWGG 1 cut(s) 1365
BciVI GTATCC 2 cut(s) 692, 1299
BcnI CCSGG 1 cut(s) 1229
BcoDI GTCTC 2 cut(s) 616, 1542
BfaI CTAG 3 cut(s) 57, 272, 1434
BfmI CTRYAG 2 cut(s) 29, 1338
BfoI RGCGCY 1 cut(s) 981
BfrI CTTAAG 1 cut(s) 479
BfuI GTATCC 2 cut(s) 692, 1299
BglII AGATCT 1 cut(s) 652
BisI GCNGC 2 cut(s) 26, 1431
BlsI GCNGC 2 cut(s) 27, 1432
Bme1390I CCNGG 2 cut(s) 1229, 1365
Bme18I GGWCC 2 cut(s) 395, 743
BmgT120I GGNCC 2 cut(s) 395, 743
BmiI GGNNCC 1 cut(s) 1362
BmrFI CCNGG 2 cut(s) 1229, 1365
BmsI GCATC 5 cut(s) 304, 815, 1057, 1417, 1515
BpiI GAAGAC 3 cut(s) 41, 857, 1413
BpmI CTGGAG 1 cut(s) 1010
BpuEI CTTGAG 1 cut(s) 286
BpuMI CCSGG 1 cut(s) 1229
BsaAI YACGTR 1 cut(s) 286
BsaBI GATNNNNATC 1 cut(s) 230
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 4 cut(s) 259, 456, 709, 987
Bse1I ACTGG 1 cut(s) 1483
Bse3DI GCAATG 3 cut(s) 184, 501, 738
Bse8I GATNNNNATC 1 cut(s) 230
BseBI CCWGG 1 cut(s) 1365
BseGI GGATG 2 cut(s) 1060, 1119
BseJI GATNNNNATC 1 cut(s) 230
BseLI CCNNNNNNNGG 4 cut(s) 259, 456, 709, 987
BseMI GCAATG 3 cut(s) 184, 501, 738
BseMII CTCAG 2 cut(s) 333, 428
BseNI ACTGG 1 cut(s) 1483
BseRI GAGGAG 2 cut(s) 1061, 1456
BseSI GKGCMC 2 cut(s) 1011, 1288
BseXI GCAGC 1 cut(s) 1442
BseYI CCCAGC 2 cut(s) 1214, 1373
BshFI GGCC 1 cut(s) 1394
BsiHKAI GWGCWC 3 cut(s) 889, 1026, 1288
BsiSI CCGG 2 cut(s) 791, 1228
BslI CCNNNNNNNGG 4 cut(s) 259, 456, 709, 987
BsmAI GTCTC 2 cut(s) 616, 1542
BsmBI CGTCTC 1 cut(s) 616
BsmI GAATGC 2 cut(s) 580, 1005
BsnI GGCC 1 cut(s) 1394
Bsp1286I GDGCHC 4 cut(s) 889, 1011, 1026, 1288
Bsp143I GATC 4 cut(s) 225, 652, 943, 1360
BspACI CCGC 2 cut(s) 26, 189
BspANI GGCC 1 cut(s) 1394
BspCNI CTCAG 2 cut(s) 334, 429
BspLI GGNNCC 1 cut(s) 1362
BspMAI CTGCAG 1 cut(s) 1342
BspPI GGATC 2 cut(s) 1355, 1368
BspQI GCTCTTC 1 cut(s) 1204
BspTI CTTAAG 1 cut(s) 479
BsrDI GCAATG 3 cut(s) 184, 501, 738
BsrI ACTGG 1 cut(s) 1483
BssMI GATC 4 cut(s) 225, 652, 943, 1360
BssNAI GTATAC 1 cut(s) 1279
Bst1107I GTATAC 1 cut(s) 1279
Bst2UI CCWGG 1 cut(s) 1365
Bst4CI ACNGT 3 cut(s) 7, 911, 1283
Bst6I CTCTTC 1 cut(s) 1204
BstAFI CTTAAG 1 cut(s) 479
BstBAI YACGTR 1 cut(s) 286
BstC8I GCNNGC 7 cut(s) 758, 785, 1011, 1189, 1253, 1263, 1396
BstDEI CTNAG 3 cut(s) 342, 437, 597
BstF5I GGATG 2 cut(s) 1060, 1119
BstH2I RGCGCY 1 cut(s) 981
BstHHI GCGC 1 cut(s) 980
BstKTI GATC 4 cut(s) 228, 655, 946, 1363
BstMAI GTCTC 2 cut(s) 616, 1542
BstMBI GATC 4 cut(s) 225, 652, 943, 1360
BstMWI GCNNNNNNNGC 4 cut(s) 62, 491, 556, 584
BstNI CCWGG 1 cut(s) 1365
BstNSI RCATGY 3 cut(s) 756, 1255, 1402
BstSCI CCNGG 2 cut(s) 1227, 1363
BstSFI CTRYAG 2 cut(s) 29, 1338
BstSLI GKGCMC 2 cut(s) 1011, 1288
BstV1I GCAGC 1 cut(s) 1442
BstV2I GAAGAC 3 cut(s) 41, 857, 1413
BstX2I RGATCY 2 cut(s) 652, 1360
BstXI CCANNNNNNTGG 2 cut(s) 47, 1609
BstYI RGATCY 2 cut(s) 652, 1360
BstZ17I GTATAC 1 cut(s) 1279
BsuI GTATCC 2 cut(s) 692, 1299
BsuRI GGCC 1 cut(s) 1394
BtgZI GCGATG 1 cut(s) 1432
BtsCI GGATG 2 cut(s) 1060, 1119
BtsI GCAGTG 1 cut(s) 889
BtsIMutI CAGTG 1 cut(s) 889
Cac8I GCNNGC 7 cut(s) 758, 785, 1011, 1189, 1253, 1263, 1396
CaiI CAGNNNCTG 1 cut(s) 1070
CfoI GCGC 1 cut(s) 980
Cfr13I GGNCC 2 cut(s) 395, 743
CseI GACGC 1 cut(s) 1418
Csp6I GTAC 2 cut(s) 283, 460
CviQI GTAC 2 cut(s) 283, 460
DdeI CTNAG 3 cut(s) 342, 437, 597
DpnI GATC 4 cut(s) 227, 654, 945, 1362
DpnII GATC 4 cut(s) 225, 652, 943, 1360
EaeI YGGCCR 1 cut(s) 1392
Eam1104I CTCTTC 1 cut(s) 1204
EarI CTCTTC 1 cut(s) 1204
Eco47I GGWCC 2 cut(s) 395, 743
Eco57I CTGAAG 1 cut(s) 426
EcoO109I RGGNCCY 1 cut(s) 743
EcoRI GAATTC 1 cut(s) 667
EcoRII CCWGG 1 cut(s) 1363
EcoT22I ATGCAT 1 cut(s) 1005
Esp3I CGTCTC 1 cut(s) 616
FblI GTMKAC 3 cut(s) 241, 1197, 1278
Fnu4HI GCNGC 2 cut(s) 26, 1431
FokI GGATG 2 cut(s) 1047, 1126
Fsp4HI GCNGC 2 cut(s) 26, 1431
FspBI CTAG 3 cut(s) 57, 272, 1434
GlaI GCGC 1 cut(s) 979
GluI GCNGC 2 cut(s) 26, 1431
GsaI CCCAGC 2 cut(s) 1218, 1377
GsuI CTGGAG 1 cut(s) 1010
HaeII RGCGCY 1 cut(s) 981
HaeIII GGCC 1 cut(s) 1394
HapII CCGG 2 cut(s) 791, 1228
HgaI GACGC 1 cut(s) 1418
HhaI GCGC 1 cut(s) 980
Hin6I GCGC 1 cut(s) 978
HinP1I GCGC 1 cut(s) 978
HindIII AAGCTT 1 cut(s) 91
HinfI GANTC 5 cut(s) 299, 832, 869, 1049, 1535
HpaII CCGG 2 cut(s) 791, 1228
HphI GGTGA 2 cut(s) 308, 1532
Hpy166II GTNNAC 6 cut(s) 242, 462, 1095, 1198, 1279, 1286
Hpy188I TCNGA 3 cut(s) 236, 648, 1454
Hpy188III TCNNGA 7 cut(s) 81, 208, 621, 930, 1027, 1064, 1468
Hpy8I GTNNAC 6 cut(s) 242, 462, 1095, 1198, 1279, 1286
HpyAV CCTTC 2 cut(s) 316, 1211
HpyCH4III ACNGT 3 cut(s) 7, 911, 1283
HpyCH4IV ACGT 3 cut(s) 107, 285, 1483
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 491, 556, 584
HpyF3I CTNAG 3 cut(s) 342, 437, 597
HpySE526I ACGT 3 cut(s) 107, 285, 1483
HspAI GCGC 1 cut(s) 978
Kzo9I GATC 4 cut(s) 225, 652, 943, 1360
LguI GCTCTTC 1 cut(s) 1204
LmnI GCTCC 5 cut(s) 491, 975, 1029, 1295, 1523
Lsp1109I GCAGC 1 cut(s) 1442
LweI GCATC 5 cut(s) 304, 815, 1057, 1417, 1515
MaeI CTAG 3 cut(s) 57, 272, 1434
MaeII ACGT 3 cut(s) 107, 285, 1483
MaeIII GTNAC 3 cut(s) 296, 1103, 1218
MalI GATC 4 cut(s) 227, 654, 945, 1362
MboI GATC 4 cut(s) 225, 652, 943, 1360
MflI RGATCY 2 cut(s) 652, 1360
MhlI GDGCHC 4 cut(s) 889, 1011, 1026, 1288
MlsI TGGCCA 1 cut(s) 1394
MluCI AATT 8 cut(s) 97, 335, 609, 638, 667, 720, 1134, 1346
MluNI TGGCCA 1 cut(s) 1394
MlyI GAGTC 3 cut(s) 293, 1058, 1544
MmeI TCCRAC 1 cut(s) 644
Mox20I TGGCCA 1 cut(s) 1394
Mph1103I ATGCAT 1 cut(s) 1005
MroXI GAANNNNTTC 2 cut(s) 326, 723
MscI TGGCCA 1 cut(s) 1394
MseI TTAA 4 cut(s) 96, 414, 480, 1236
MslI CAYNNNNRTG 4 cut(s) 896, 1065, 1256, 1607
Msp20I TGGCCA 1 cut(s) 1394
MspCI CTTAAG 1 cut(s) 479
MspI CCGG 2 cut(s) 791, 1228
MspR9I CCNGG 2 cut(s) 1229, 1365
Mva1269I GAATGC 2 cut(s) 580, 1005
MvaI CCWGG 1 cut(s) 1365
MwoI GCNNNNNNNGC 4 cut(s) 62, 491, 556, 584
NciI CCSGG 1 cut(s) 1229
NdeII GATC 4 cut(s) 225, 652, 943, 1360
NlaIV GGNNCC 1 cut(s) 1362
NmuCI GTSAC 2 cut(s) 296, 1103
NsiI ATGCAT 1 cut(s) 1005
NspI RCATGY 3 cut(s) 756, 1255, 1402
PaeI GCATGC 1 cut(s) 1255
PciSI GCTCTTC 1 cut(s) 1204
PctI GAATGC 2 cut(s) 580, 1005
PdmI GAANNNNTTC 2 cut(s) 326, 723
PfeI GAWTC 2 cut(s) 832, 869
PfoI TCCNGGA 1 cut(s) 1363
PkrI GCNGC 2 cut(s) 27, 1432
PleI GAGTC 3 cut(s) 293, 1057, 1543
PpsI GAGTC 3 cut(s) 293, 1057, 1543
Ppu21I YACGTR 1 cut(s) 286
PpuMI RGGWCCY 1 cut(s) 743
Psp5II RGGWCCY 1 cut(s) 743
Psp6I CCWGG 1 cut(s) 1363
PspFI CCCAGC 2 cut(s) 1214, 1373
PspGI CCWGG 1 cut(s) 1363
PspN4I GGNNCC 1 cut(s) 1362
PspPI GGNCC 2 cut(s) 395, 743
PspPPI RGGWCCY 1 cut(s) 743
PstI CTGCAG 1 cut(s) 1342
PstNI CAGNNNCTG 1 cut(s) 1070
PsuI RGATCY 2 cut(s) 652, 1360
RsaI GTAC 2 cut(s) 284, 461
RsaNI GTAC 2 cut(s) 283, 460
RseI CAYNNNNRTG 4 cut(s) 896, 1065, 1256, 1607
SapI GCTCTTC 1 cut(s) 1204
SaqAI TTAA 4 cut(s) 96, 414, 480, 1236
SatI GCNGC 2 cut(s) 26, 1431
Sau3AI GATC 4 cut(s) 225, 652, 943, 1360
Sau96I GGNCC 2 cut(s) 395, 743
SchI GAGTC 3 cut(s) 293, 1058, 1544
ScrFI CCNGG 2 cut(s) 1229, 1365
SduI GDGCHC 4 cut(s) 889, 1011, 1026, 1288
SfaNI GCATC 5 cut(s) 304, 815, 1057, 1417, 1515
SfcI CTRYAG 2 cut(s) 29, 1338
SinI GGWCC 2 cut(s) 395, 743
SmiMI CAYNNNNRTG 4 cut(s) 896, 1065, 1256, 1607
SmlI CTYRAG 2 cut(s) 301, 479
SmoI CTYRAG 2 cut(s) 301, 479
SphI GCATGC 1 cut(s) 1255
Sse9I AATT 8 cut(s) 97, 335, 609, 638, 667, 720, 1134, 1346
SsiI CCGC 2 cut(s) 26, 189
SspMI CTAG 3 cut(s) 57, 272, 1434
StyD4I CCNGG 2 cut(s) 1227, 1363
TaaI ACNGT 3 cut(s) 7, 911, 1283
TaiI ACGT 3 cut(s) 110, 288, 1486
TaqI TCGA 6 cut(s) 181, 330, 620, 633, 946, 1490
TasI AATT 8 cut(s) 97, 335, 609, 638, 667, 720, 1134, 1346
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 2 cut(s) 832, 869
Tru1I TTAA 4 cut(s) 96, 414, 480, 1236
Tru9I TTAA 4 cut(s) 96, 414, 480, 1236
TscAI CASTG 1 cut(s) 889
TseFI GTSAC 2 cut(s) 296, 1103
TseI GCWGC 1 cut(s) 1430
Tsp45I GTSAC 2 cut(s) 296, 1103
TspDTI ATGAA 9 cut(s) 59, 103, 152, 348, 515, 651, 716, 824, 1419
TspGWI ACGGA 2 cut(s) 334, 1173
TspRI CASTG 1 cut(s) 889
Vha464I CTTAAG 1 cut(s) 479
VneI GTGCAC 1 cut(s) 1284
VpaK11BI GGWCC 2 cut(s) 395, 743
XapI RAATTY 3 cut(s) 667, 720, 1134
XceI RCATGY 3 cut(s) 756, 1255, 1402
XmiI GTMKAC 3 cut(s) 241, 1197, 1278
XmnI GAANNNNTTC 2 cut(s) 326, 723
XspI CTAG 3 cut(s) 57, 272, 1434
Zsp2I ATGCAT 1 cut(s) 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.