Rroxscaffold_1G00042910
ERF Family

Belongs to the calycin superfamily. Lipocalin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0009620
Physical Location & Seq
Reverse (-)
61183805 .. 61188647
4843 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042910.1

Sequence Viewer

Length: 1494 bp
ATGTCTGAGAGGCCAGATGAAAACCATACTGTTGAGCTCGATCAAGTTCAGGTCATGGAGAACAACATTAATCTATTGTCTGGTCCATCCGATGGTGATGATGTAAAGCTGGTTGAACCTTGTGGGGAGGGTTCAAACATGGAAGACACTCCTAGCAAAGAGCTTTCCCAAGAAGGTTGCTTGCCACAAGTCTCTTCAAGTTCAGAGGCATCAAAACTGAAGTCTGGACCGGTTAAAGTGGCATTCGTACAAATTAAAAAACCCATAACATCATCTGCAAATACATCTGGATTCCATTCTAGAGAAACTGACATCATTAACCATAATAAGGAAGATCCATTGTTCAGCTTGCTTTCTAGTGCCAATATCAAGGTCTCAAAGATATGGTGTGATGTGGGTCAACCAGCATTGAAAGCAAAGCCTAGACAATGGTTCATGCTCTTTTACAAACAGCACCACTTCTCCTCCAGTGTTCTCCTCATGTCTCTTCCTGTAGATGACATTGTGCTTCTATGCAATTCGAAAATAGTGGATCTCTGTGCTGTCAGATTCATAAGAAAGGGAAAGCCTGGGAAAATAGTGATGAAGTGCTGTGCAGAGCAATCTATGAGCAACAAGCCAGTAACCAAACATGTATTATCTGGGTTTGCGGCATCTTTAGTACTTCTCTCTCAAATAAACCAGGCTGTTGCATCAGAAGTTTACTTTCAAAGAAATACTTATGAGCTTGCAAATGCTGCTGAGAATACAGTGACTCTTCCTCTTGATAAGGGTTCTGATGAAGGAGCTGAGAGGCTAATGATGATGAGAGGCATGACAGCAAACAATTTTGACCCCATTAGATATTCTGGTAGGTGGTATGAAGTTGCTTCACTTAAACGTGGATTTGCTGGGCAAGGTCAGGAAGACTGTCATTGCACCCAGGGTGTATATACCTTTGATATTGAGAAGAGGGCCATCCAGGTTGATACCTTCTGTGTTCATGGGTCTCCTGACGGTTATATAACTGGCATAAGGGGAAACGTTCAATGCCTTTCAGATAAAGATTTGGAAAAGAATGAGTCAGATCTAGAAATGCAGGAGATGATCAAAGAGAAGTGTTTCCTCCGTTTTCCAACATTGCCATTTATCCCTAAGTTGCCGTATGATGTGATCGCAACTGATTATGACAATTTTGCTCTTGTTTCAGGAGCAAAAGATACAGGTTTCATACAGATCTACTCCAGAACACCAACTCCTGGTCCTGAATTCATAGAGAAGTACAAATCTTACTTGGCCAACTTTGGATATGACCCAACCAAAATCAAGGACACCCCACAAGACTGTGAAGTGATGTCGGACAGTCGGCTATCTGCAATGATGTCAATGTCCGGAATGCAAAAAATTTTAACAAATGAGTTTCCTGATCTAGAATTGAAGCGCCCTGTTCAATTCGACCCCTTCACTAGTGTATTTGACACTCTGAAGAAGCTTGTTCAGCTTTATTTCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0001101 GO:0001817 GO:0001818 GO:0001952 GO:0001953 GO:0002682 GO:0002683 GO:0002685 GO:0002686 GO:0003006 GO:0003674 GO:0005488 GO:0005496 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0005975 GO:0005996 GO:0006006 GO:0006629 GO:0006950 GO:0006979 GO:0007162 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0007568 GO:0008150 GO:0008152 GO:0008285 GO:0008289 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009611 GO:0009628 GO:0009635 GO:0009636 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010117 GO:0010154 GO:0010431 GO:0010565 GO:0010605 GO:0010640 GO:0010642 GO:0010646 GO:0010648 GO:0010810 GO:0010812 GO:0012505 GO:0014012 GO:0015485 GO:0016020 GO:0016043 GO:0019216 GO:0019217 GO:0019222 GO:0019318 GO:0021700 GO:0022008 GO:0022414 GO:0022626 GO:0023051 GO:0023057 GO:0030030 GO:0030154 GO:0030155 GO:0030182 GO:0030334 GO:0030336 GO:0030425 GO:0031099 GO:0031102 GO:0031103 GO:0031175 GO:0031323 GO:0031324 GO:0031347 GO:0031348 GO:0031976 GO:0031977 GO:0031984 GO:0032101 GO:0032102 GO:0032386 GO:0032387 GO:0032501 GO:0032502 GO:0032504 GO:0032642 GO:0032682 GO:0032879 GO:0032880 GO:0032934 GO:0032991 GO:0033157 GO:0033554 GO:0033993 GO:0034357 GO:0034442 GO:0034443 GO:0036094 GO:0036477 GO:0040007 GO:0040012 GO:0040013 GO:0042060 GO:0042127 GO:0042221 GO:0042246 GO:0042306 GO:0042308 GO:0042493 GO:0042651 GO:0042995 GO:0043005 GO:0043025 GO:0043178 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044087 GO:0044238 GO:0044281 GO:0044297 GO:0044421 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044445 GO:0044446 GO:0044463 GO:0044464 GO:0045833 GO:0045922 GO:0046320 GO:0046322 GO:0046822 GO:0046823 GO:0048316 GO:0048468 GO:0048471 GO:0048513 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048609 GO:0048660 GO:0048662 GO:0048666 GO:0048678 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050727 GO:0050728 GO:0050746 GO:0050748 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051223 GO:0051224 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051270 GO:0051271 GO:0051716 GO:0051893 GO:0051895 GO:0055035 GO:0060255 GO:0060322 GO:0060341 GO:0060587 GO:0060588 GO:0061458 GO:0061564 GO:0062012 GO:0062014 GO:0065007 GO:0070201 GO:0071637 GO:0071638 GO:0071695 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090087 GO:0090109 GO:0090317 GO:0097159 GO:0097305 GO:0097447 GO:0097458 GO:0120025 GO:0120036 GO:0120038 GO:1900015 GO:1900016 GO:1900180 GO:1900181 GO:1901562 GO:1901700 GO:1901888 GO:1901889 GO:1903391 GO:1903392 GO:1903827 GO:1903828 GO:1904589 GO:1904590 GO:1904950 GO:1990904 GO:2000097 GO:2000098 GO:2000145 GO:2000146 GO:2000401 GO:2000402 GO:2000404 GO:2000405
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipocalin_2

Protein Analysis

497

Amino Acids

55.6

Weight (kDa)

5.56

Isoelectric Point (pI)

34.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipocalin_2 PF08212 280 - 440 4.5e-09 Lipocalin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 92, 1238
AccIII TCCGGA 1 cut(s) 1370
AciI CCGC 1 cut(s) 650
AclI AACGTT 1 cut(s) 1023
AclWI GGATC 2 cut(s) 329, 540
AcoI YGGCCR 1 cut(s) 1275
AcsI RAATTY 2 cut(s) 1247, 1383
AcuI CTGAAG 2 cut(s) 239, 1484
AfaI GTAC 3 cut(s) 249, 663, 1262
AfiI CCNNNNNNNGG 3 cut(s) 92, 328, 1238
AflIII ACRYGT 1 cut(s) 631
AgeI ACCGGT 1 cut(s) 229
AgsI TTSAA 9 cut(s) 116, 135, 198, 412, 710, 1028, 1417, 1430, 1489
AhlI ACTAGT 1 cut(s) 1445
AjnI CCWGG 5 cut(s) 568, 681, 921, 960, 1237
AloI GAACNNNNNNTCC 2 cut(s) 1219, 1251
AluBI AGCT 8 cut(s) 37, 109, 163, 348, 727, 788, 1471, 1480
AluI AGCT 8 cut(s) 37, 109, 163, 348, 727, 788, 1471, 1480
Alw21I GWGCWC 1 cut(s) 39
Alw26I GTCTC 4 cut(s) 196, 379, 489, 993
AlwI GGATC 2 cut(s) 329, 540
Aor13HI TCCGGA 1 cut(s) 1370
AoxI GGCC 3 cut(s) 11, 954, 1275
ApeKI GCWGC 1 cut(s) 737
ApoI RAATTY 2 cut(s) 1247, 1383
ArsI GACNNNNNNTTYG 2 cut(s) 206, 238
AseI ATTAAT 1 cut(s) 69
AsiGI ACCGGT 1 cut(s) 229
Asp700I GAANNNNTTC 1 cut(s) 1100
AspLEI GCGC 1 cut(s) 1422
AspS9I GGNCC 4 cut(s) 83, 227, 954, 1241
AsuHPI GGTGA 1 cut(s) 107
AsuII TTCGAA 1 cut(s) 521
AvaII GGWCC 3 cut(s) 83, 227, 1241
BalI TGGCCA 1 cut(s) 1277
BanII GRGCYC 1 cut(s) 39
BbsI GAAGAC 2 cut(s) 150, 912
Bbv12I GWGCWC 1 cut(s) 39
BbvI GCAGC 1 cut(s) 724
BccI CCATC 3 cut(s) 86, 94, 965
BceAI ACGGC 1 cut(s) 1126
BciT130I CCWGG 5 cut(s) 570, 683, 923, 962, 1239
BclI TGATCA 1 cut(s) 1086
BcoDI GTCTC 4 cut(s) 196, 379, 489, 993
BcuI ACTAGT 1 cut(s) 1445
BfaI CTAG 7 cut(s) 153, 300, 357, 423, 1070, 1409, 1446
BfmI CTRYAG 1 cut(s) 492
BfoI RGCGCY 1 cut(s) 1423
BglII AGATCT 2 cut(s) 1066, 1215
BisI GCNGC 2 cut(s) 651, 738
BlsI GCNGC 2 cut(s) 652, 739
BmcAI AGTACT 1 cut(s) 663
Bme1390I CCNGG 5 cut(s) 570, 683, 923, 962, 1239
Bme18I GGWCC 3 cut(s) 83, 227, 1241
BmgT120I GGNCC 4 cut(s) 83, 227, 954, 1241
BmrFI CCNGG 5 cut(s) 570, 683, 923, 962, 1239
BmsI GCATC 3 cut(s) 218, 662, 701
BpiI GAAGAC 2 cut(s) 150, 912
BpmI CTGGAG 2 cut(s) 451, 1207
Bpu14I TTCGAA 1 cut(s) 521
BsaI GGTCTC 2 cut(s) 379, 993
BsaJI CCNNGG 3 cut(s) 569, 921, 922
BsaWI WCCGGW 2 cut(s) 229, 1370
BsaXI ACNNNNNCTCC 6 cut(s) 446, 449, 476, 479, 1219, 1249
Bsc4I CCNNNNNNNGG 3 cut(s) 92, 328, 1238
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 3 cut(s) 468, 620, 1012
Bse3DI GCAATG 3 cut(s) 913, 1118, 1362
BseAI TCCGGA 1 cut(s) 1370
BseBI CCWGG 5 cut(s) 570, 683, 923, 962, 1239
BseDI CCNNGG 3 cut(s) 569, 921, 922
BseGI GGATG 2 cut(s) 86, 957
BseLI CCNNNNNNNGG 3 cut(s) 92, 328, 1238
BseMI GCAATG 3 cut(s) 913, 1118, 1362
BseMII CTCAG 2 cut(s) 732, 780
BseNI ACTGG 3 cut(s) 468, 620, 1012
BseRI GAGGAG 2 cut(s) 454, 467
BseXI GCAGC 1 cut(s) 724
BseYI CCCAGC 1 cut(s) 890
BsgI GTGCAG 1 cut(s) 615
BshFI GGCC 3 cut(s) 13, 956, 1277
BshTI ACCGGT 1 cut(s) 229
BsiHKAI GWGCWC 1 cut(s) 39
BsiSI CCGG 2 cut(s) 230, 1371
BslI CCNNNNNNNGG 3 cut(s) 92, 328, 1238
BsmAI GTCTC 4 cut(s) 196, 379, 489, 993
BsmI GAATGC 2 cut(s) 242, 1380
BsnI GGCC 3 cut(s) 13, 956, 1277
Bso31I GGTCTC 2 cut(s) 379, 993
Bsp119I TTCGAA 1 cut(s) 521
Bsp1286I GDGCHC 1 cut(s) 39
Bsp13I TCCGGA 1 cut(s) 1370
Bsp143I GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
BspACI CCGC 1 cut(s) 650
BspANI GGCC 3 cut(s) 13, 956, 1277
BspCNI CTCAG 2 cut(s) 733, 781
BspEI TCCGGA 1 cut(s) 1370
BspPI GGATC 2 cut(s) 329, 540
BspT104I TTCGAA 1 cut(s) 521
BspTNI GGTCTC 2 cut(s) 379, 993
BsrDI GCAATG 3 cut(s) 913, 1118, 1362
BsrFI RCCGGY 1 cut(s) 229
BsrI ACTGG 3 cut(s) 468, 620, 1012
BssAI RCCGGY 1 cut(s) 229
BssECI CCNNGG 3 cut(s) 569, 921, 922
BssMI GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
Bst2UI CCWGG 5 cut(s) 570, 683, 923, 962, 1239
Bst4CI ACNGT 6 cut(s) 31, 751, 911, 998, 1325, 1343
Bst6I CTCTTC 4 cut(s) 199, 492, 762, 944
BstAPI GCANNNNNTGC 1 cut(s) 737
BstBI TTCGAA 1 cut(s) 521
BstC8I GCNNGC 3 cut(s) 182, 350, 729
BstDEI CTNAG 4 cut(s) 6, 741, 789, 1134
BstF5I GGATG 2 cut(s) 86, 957
BstH2I RGCGCY 1 cut(s) 1423
BstHHI GCGC 1 cut(s) 1422
BstKTI GATC 8 cut(s) 43, 337, 535, 1069, 1089, 1155, 1218, 1408
BstMAI GTCTC 4 cut(s) 196, 379, 489, 993
BstMBI GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
BstMWI GCNNNNNNNGC 3 cut(s) 413, 737, 1477
BstNI CCWGG 5 cut(s) 570, 683, 923, 962, 1239
BstNSI RCATGY 1 cut(s) 635
BstSCI CCNGG 5 cut(s) 568, 681, 921, 960, 1237
BstSFI CTRYAG 1 cut(s) 492
BstV1I GCAGC 1 cut(s) 724
BstV2I GAAGAC 2 cut(s) 150, 912
BstX2I RGATCY 4 cut(s) 334, 532, 1066, 1215
BstYI RGATCY 4 cut(s) 334, 532, 1066, 1215
BsuRI GGCC 3 cut(s) 13, 956, 1277
BtsCI GGATG 2 cut(s) 86, 957
BtsIMutI CAGTG 2 cut(s) 475, 756
Cac8I GCNNGC 3 cut(s) 182, 350, 729
CfoI GCGC 1 cut(s) 1422
Cfr10I RCCGGY 1 cut(s) 229
Cfr13I GGNCC 4 cut(s) 83, 227, 954, 1241
Csp6I GTAC 3 cut(s) 248, 662, 1261
CspAI ACCGGT 1 cut(s) 229
CviAII CATG 7 cut(s) 55, 139, 436, 481, 632, 814, 983
CviQI GTAC 3 cut(s) 248, 662, 1261
DdeI CTNAG 4 cut(s) 6, 741, 789, 1134
DpnI GATC 8 cut(s) 42, 336, 534, 1068, 1088, 1154, 1217, 1407
DpnII GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
EaeI YGGCCR 1 cut(s) 1275
Eam1104I CTCTTC 4 cut(s) 199, 492, 762, 944
EarI CTCTTC 4 cut(s) 199, 492, 762, 944
Ecl136II GAGCTC 1 cut(s) 37
Eco24I GRGCYC 1 cut(s) 39
Eco31I GGTCTC 2 cut(s) 379, 993
Eco47I GGWCC 3 cut(s) 83, 227, 1241
Eco53kI GAGCTC 1 cut(s) 37
Eco57I CTGAAG 2 cut(s) 239, 1484
EcoICRI GAGCTC 1 cut(s) 37
EcoRI GAATTC 1 cut(s) 1247
EcoRII CCWGG 5 cut(s) 568, 681, 921, 960, 1237
EcoT38I GRGCYC 1 cut(s) 39
FaeI CATG 7 cut(s) 58, 142, 439, 484, 635, 817, 986
FalI AAGNNNNNCTT 2 cut(s) 703, 735
FatI CATG 7 cut(s) 54, 138, 435, 480, 631, 813, 982
FbaI TGATCA 1 cut(s) 1086
Fnu4HI GCNGC 2 cut(s) 651, 738
FokI GGATG 2 cut(s) 73, 944
FriOI GRGCYC 1 cut(s) 39
Fsp4HI GCNGC 2 cut(s) 651, 738
FspBI CTAG 7 cut(s) 153, 300, 357, 423, 1070, 1409, 1446
GlaI GCGC 1 cut(s) 1421
GluI GCNGC 2 cut(s) 651, 738
GsaI CCCAGC 1 cut(s) 894
GsuI CTGGAG 2 cut(s) 451, 1207
HaeII RGCGCY 1 cut(s) 1423
HaeIII GGCC 3 cut(s) 13, 956, 1277
HapII CCGG 2 cut(s) 230, 1371
HhaI GCGC 1 cut(s) 1422
Hin1II CATG 7 cut(s) 58, 142, 439, 484, 635, 817, 986
Hin6I GCGC 1 cut(s) 1420
HinP1I GCGC 1 cut(s) 1420
HincII GTYRAC 1 cut(s) 401
HindII GTYRAC 1 cut(s) 401
HindIII AAGCTT 1 cut(s) 1469
HinfI GANTC 4 cut(s) 291, 549, 754, 1061
HpaII CCGG 2 cut(s) 230, 1371
HphI GGTGA 1 cut(s) 107
Hpy166II GTNNAC 2 cut(s) 401, 703
Hpy8I GTNNAC 2 cut(s) 401, 703
HpyAV CCTTC 4 cut(s) 167, 776, 982, 1450
HpyCH4III ACNGT 6 cut(s) 31, 751, 911, 998, 1325, 1343
HpyCH4IV ACGT 2 cut(s) 880, 1023
HpyCH4V TGCA 9 cut(s) 278, 516, 596, 692, 731, 918, 1078, 1355, 1378
HpyF10VI GCNNNNNNNGC 3 cut(s) 413, 737, 1477
HpyF3I CTNAG 4 cut(s) 6, 741, 789, 1134
HpySE526I ACGT 2 cut(s) 880, 1023
Hsp92II CATG 7 cut(s) 58, 142, 439, 484, 635, 817, 986
HspAI GCGC 1 cut(s) 1420
Kpn2I TCCGGA 1 cut(s) 1370
Ksp22I TGATCA 1 cut(s) 1086
Kzo9I GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
LmnI GCTCC 2 cut(s) 785, 1190
Lsp1109I GCAGC 1 cut(s) 724
LweI GCATC 3 cut(s) 218, 662, 701
MaeI CTAG 7 cut(s) 153, 300, 357, 423, 1070, 1409, 1446
MaeII ACGT 2 cut(s) 880, 1023
MaeIII GTNAC 2 cut(s) 622, 751
MalI GATC 8 cut(s) 42, 336, 534, 1068, 1088, 1154, 1217, 1407
MboI GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
MboII GAAGA 8 cut(s) 155, 186, 344, 479, 749, 917, 961, 1477
MflI RGATCY 4 cut(s) 334, 532, 1066, 1215
MhlI GDGCHC 1 cut(s) 39
MlsI TGGCCA 1 cut(s) 1277
MluCI AATT 8 cut(s) 252, 517, 826, 1171, 1247, 1383, 1412, 1430
MluNI TGGCCA 1 cut(s) 1277
MlyI GAGTC 2 cut(s) 748, 1070
MmeI TCCRAC 2 cut(s) 1139, 1317
Mox20I TGGCCA 1 cut(s) 1277
MroI TCCGGA 1 cut(s) 1370
MroXI GAANNNNTTC 1 cut(s) 1100
MscI TGGCCA 1 cut(s) 1277
MseI TTAA 6 cut(s) 69, 234, 255, 318, 876, 1388
Msp20I TGGCCA 1 cut(s) 1277
MspI CCGG 2 cut(s) 230, 1371
MspR9I CCNGG 5 cut(s) 570, 683, 923, 962, 1239
Mva1269I GAATGC 2 cut(s) 242, 1380
MvaI CCWGG 5 cut(s) 570, 683, 923, 962, 1239
MwoI GCNNNNNNNGC 3 cut(s) 413, 737, 1477
NdeII GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
NlaIII CATG 7 cut(s) 58, 142, 439, 484, 635, 817, 986
NmuCI GTSAC 1 cut(s) 751
NspI RCATGY 1 cut(s) 635
NspV TTCGAA 1 cut(s) 521
PasI CCCWGGG 1 cut(s) 922
PciI ACATGT 1 cut(s) 631
PctI GAATGC 2 cut(s) 242, 1380
PdmI GAANNNNTTC 1 cut(s) 1100
PfeI GAWTC 2 cut(s) 291, 549
PflMI CCANNNNNTGG 2 cut(s) 92, 1238
PinAI ACCGGT 1 cut(s) 229
PkrI GCNGC 2 cut(s) 652, 739
PleI GAGTC 2 cut(s) 748, 1069
PpsI GAGTC 2 cut(s) 748, 1069
PscI ACATGT 1 cut(s) 631
PshBI ATTAAT 1 cut(s) 69
Psp124BI GAGCTC 1 cut(s) 39
Psp1406I AACGTT 1 cut(s) 1023
Psp6I CCWGG 5 cut(s) 568, 681, 921, 960, 1237
PspFI CCCAGC 1 cut(s) 890
PspGI CCWGG 5 cut(s) 568, 681, 921, 960, 1237
PspPI GGNCC 4 cut(s) 83, 227, 954, 1241
PsuI RGATCY 4 cut(s) 334, 532, 1066, 1215
RsaI GTAC 3 cut(s) 249, 663, 1262
RsaNI GTAC 3 cut(s) 248, 662, 1261
SacI GAGCTC 1 cut(s) 39
SaqAI TTAA 6 cut(s) 69, 234, 255, 318, 876, 1388
SatI GCNGC 2 cut(s) 651, 738
Sau3AI GATC 8 cut(s) 40, 334, 532, 1066, 1086, 1152, 1215, 1405
Sau96I GGNCC 4 cut(s) 83, 227, 954, 1241
ScaI AGTACT 1 cut(s) 663
SchI GAGTC 2 cut(s) 748, 1070
ScrFI CCNGG 5 cut(s) 570, 683, 923, 962, 1239
SduI GDGCHC 1 cut(s) 39
SfaNI GCATC 3 cut(s) 218, 662, 701
SfcI CTRYAG 1 cut(s) 492
SfuI TTCGAA 1 cut(s) 521
SinI GGWCC 3 cut(s) 83, 227, 1241
SpeI ACTAGT 1 cut(s) 1445
Sse9I AATT 8 cut(s) 252, 517, 826, 1171, 1247, 1383, 1412, 1430
SsiI CCGC 1 cut(s) 650
SspMI CTAG 7 cut(s) 153, 300, 357, 423, 1070, 1409, 1446
SstI GAGCTC 1 cut(s) 39
StyD4I CCNGG 5 cut(s) 568, 681, 921, 960, 1237
TaaI ACNGT 6 cut(s) 31, 751, 911, 998, 1325, 1343
TaiI ACGT 2 cut(s) 883, 1026
TaqI TCGA 3 cut(s) 39, 521, 1434
TasI AATT 8 cut(s) 252, 517, 826, 1171, 1247, 1383, 1412, 1430
TatI WGTACW 2 cut(s) 661, 1260
TauI GCSGC 1 cut(s) 653
TfiI GAWTC 2 cut(s) 291, 549
Tru1I TTAA 6 cut(s) 69, 234, 255, 318, 876, 1388
Tru9I TTAA 6 cut(s) 69, 234, 255, 318, 876, 1388
TscAI CASTG 2 cut(s) 475, 756
TseFI GTSAC 1 cut(s) 751
TseI GCWGC 1 cut(s) 737
Tsp45I GTSAC 1 cut(s) 751
TspDTI ATGAA 9 cut(s) 33, 424, 541, 599, 795, 876, 971, 1198, 1240
TspGWI ACGGA 1 cut(s) 1097
TspRI CASTG 2 cut(s) 475, 756
Van91I CCANNNNNTGG 2 cut(s) 92, 1238
VpaK11BI GGWCC 3 cut(s) 83, 227, 1241
VspI ATTAAT 1 cut(s) 69
XapI RAATTY 2 cut(s) 1247, 1383
XbaI TCTAGA 3 cut(s) 299, 1069, 1408
XceI RCATGY 1 cut(s) 635
XmnI GAANNNNTTC 1 cut(s) 1100
XspI CTAG 7 cut(s) 153, 300, 357, 423, 1070, 1409, 1446
ZrmI AGTACT 1 cut(s) 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.