Prupe.4G231700_v2.0.a1

C2 domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
14848143 .. 14851029
2887 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G231700.1

Sequence Viewer

Length: 1263 bp
ATGGCTTCCCCTCAATCTGTTGTGTCTCCATTCAAAGGCTCTGTTGTTGCTGTGCCTGAGAAGCAGAAATCCAACTTCTTCATCCGTACCGCTGGGCCTTCATCCAATGGAACTGATGCCAATAGAAAGGAAGCCATGGTTTGTAATTCAGAGAATTCCATTGGTGTTCTTGAGGTTTACGTTCATCAGGCCAGGGACATCCACAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAGCTATGCCTGACAAGTGATCCAGAAAACACAGTCTCCACCAAAACCATTAATGGTGGTGGTAGAAATCCAGTCTTCAATGACAATGTCCAGCTCAATGTCCGGACTGTTGATTCCTCCCTCAAATGCGAGATTTGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGATCAGTTGCTGGGGTTTGCTTTGGTTCCTTTGTCAGAGGTCCTCGTCAAGAATGGGAAGTTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTGTTTCATTCCCCAGCAGGGTTTGTCCAATTGTCTCTCTCATATGCTGGAGATTCACCAGACGTAATGCCTCTGGCCTCAAATCCTATTGTGCAGGACTCAGAGATAGCCGAGCTTCCTTGTGAATTAGATAAGTTAGAGTTCCCAGATCCGAACATTGACAATGAAGACCAGAGAATGGTTTCAGAGTATATTAAGATCCCATCTTCAGAATTTGAGTCTCACAGCTCTGAGAGCTTGGTCACTGCTGAAACTGAAAATCAGCTTAGTTCAGAAGTGGGTGTTCATGCTATAGAAAGCTTCTCGACCACTGCTTTTGAGTCTATCCAGGTTCCAAAGCTTGATTCTCCCCCAAGCAGTGTGTCAACTAATGGTGCTTCATCTCCTTCAGTCCAGGCTAGCTCAGAGTCATGTGATGCTCCATCAGCTTCAGAATCTCCAAACCAGGAACAAATATCGGCCCCAGGAGAGAAAAAAGTGGATAAAGATGGTGAGACTGATTCGTCTAATGGGGTGCCAAGTGATGCATTTGCAAAACCTACTGTCACTGTCACTGTTCCTGAGCAGCAGGTGGTGCAGCAGGATTTTGTAGACATGTACATGAAAAGCATGCAGCAATTCACCGAGTCTTTGGCAAAAATGAAGCTTCCTTTGGACCTTGAATCACCAACCAGTTCAGGAAATTCGAGCACTGATCAGAAAATGCAGACACCAAAGAACAGCGGTTCCCGTGTGTTTTATGGGAGTAGGGCTTTCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

421

Amino Acids

45.6

Weight (kDa)

4.62

Isoelectric Point (pI)

57.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1060
AasI GACNNNNNNGTC 1 cut(s) 1003
Acc36I ACCTGC 1 cut(s) 1060
AccB1I GGYRCC 1 cut(s) 1015
AccB7I CCANNNNNTGG 1 cut(s) 679
AccI GTMKAC 1 cut(s) 1092
AccIII TCCGGA 1 cut(s) 342
AciI CCGC 2 cut(s) 90, 1224
AclWI GGATC 3 cut(s) 254, 644, 694
AcsI RAATTY 3 cut(s) 154, 713, 1183
AcuI CTGAAG 3 cut(s) 693, 873, 915
AfaI GTAC 2 cut(s) 88, 1100
AfiI CCNNNNNNNGG 3 cut(s) 35, 519, 679
AflIII ACRYGT 1 cut(s) 1095
AgsI TTSAA 5 cut(s) 34, 319, 407, 495, 1163
AjnI CCWGG 5 cut(s) 191, 828, 894, 945, 964
AjuI GAANNNNNNNTTGG 4 cut(s) 829, 861, 1136, 1168
AloI GAACNNNNNNTCC 2 cut(s) 1211, 1243
Alw21I GWGCWC 1 cut(s) 1193
Alw26I GTCTC 5 cut(s) 30, 280, 540, 726, 989
AlwI GGATC 3 cut(s) 254, 644, 694
AlwNI CAGNNNCTG 1 cut(s) 418
Aor13HI TCCGGA 1 cut(s) 342
AoxI GGCC 4 cut(s) 95, 189, 576, 960
ApeKI GCWGC 3 cut(s) 1066, 1078, 1114
ApoI RAATTY 3 cut(s) 154, 713, 1183
AseI ATTAAT 1 cut(s) 291
Asp700I GAANNNNTTC 2 cut(s) 479, 682
AspS9I GGNCC 4 cut(s) 95, 448, 961, 1156
AsuHPI GGTGA 5 cut(s) 403, 549, 1004, 1114, 1158
AsuNHI GCTAGC 1 cut(s) 899
AvaII GGWCC 2 cut(s) 448, 1156
BanI GGYRCC 1 cut(s) 1015
BbsI GAAGAC 2 cut(s) 307, 675
Bbv12I GWGCWC 1 cut(s) 1193
BbvI GCAGC 3 cut(s) 1078, 1090, 1126
BccI CCATC 3 cut(s) 712, 931, 983
BciT130I CCWGG 5 cut(s) 193, 830, 896, 947, 966
BclI TGATCA 1 cut(s) 1195
BcoDI GTCTC 5 cut(s) 30, 280, 540, 726, 989
BfaI CTAG 1 cut(s) 900
BfmI CTRYAG 1 cut(s) 792
BfuAI ACCTGC 1 cut(s) 1060
BisI GCNGC 3 cut(s) 1067, 1079, 1115
BlpI GCTNAGC 2 cut(s) 240, 383
BlsI GCNGC 3 cut(s) 1068, 1080, 1116
Bme1390I CCNGG 5 cut(s) 193, 830, 896, 947, 966
Bme18I GGWCC 2 cut(s) 448, 1156
BmgT120I GGNCC 4 cut(s) 95, 448, 961, 1156
BmiI GGNNCC 5 cut(s) 435, 834, 963, 1017, 1228
BmrFI CCNGG 5 cut(s) 193, 830, 896, 947, 966
BmsI GCATC 4 cut(s) 106, 369, 907, 1015
BmtI GCTAGC 1 cut(s) 903
BpiI GAAGAC 2 cut(s) 307, 675
BpmI CTGGAG 1 cut(s) 570
Bpu10I CCTNAGC 1 cut(s) 1062
Bpu1102I GCTNAGC 2 cut(s) 240, 383
BpuEI CTTGAG 1 cut(s) 191
BsaJI CCNNGG 3 cut(s) 135, 192, 964
BsaWI WCCGGW 1 cut(s) 342
BsaXI ACNNNNNCTCC 2 cut(s) 260, 290
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 519, 679
Bse1I ACTGG 2 cut(s) 311, 1173
BseAI TCCGGA 1 cut(s) 342
BseBI CCWGG 5 cut(s) 193, 830, 896, 947, 966
BseDI CCNNGG 3 cut(s) 135, 192, 964
BseGI GGATG 4 cut(s) 81, 101, 198, 384
BseLI CCNNNNNNNGG 3 cut(s) 35, 519, 679
BseMII CTCAG 6 cut(s) 48, 374, 615, 723, 918, 1053
BseNI ACTGG 2 cut(s) 311, 1173
BseXI GCAGC 3 cut(s) 1078, 1090, 1126
BseYI CCCAGC 3 cut(s) 92, 418, 514
BsgI GTGCAG 2 cut(s) 614, 1097
BshFI GGCC 4 cut(s) 97, 191, 578, 962
BshNI GGYRCC 1 cut(s) 1015
BsiHKAI GWGCWC 1 cut(s) 1193
BsiSI CCGG 1 cut(s) 343
BslFI GGGAC 1 cut(s) 209
BslI CCNNNNNNNGG 3 cut(s) 35, 519, 679
BsmAI GTCTC 5 cut(s) 30, 280, 540, 726, 989
BsmFI GGGAC 1 cut(s) 209
BsnI GGCC 4 cut(s) 97, 191, 578, 962
Bsp1286I GDGCHC 1 cut(s) 1193
Bsp13I TCCGGA 1 cut(s) 342
Bsp1407I TGTACA 1 cut(s) 1098
Bsp143I GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
Bsp1720I GCTNAGC 2 cut(s) 240, 383
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 2 cut(s) 90, 1224
BspANI GGCC 4 cut(s) 97, 191, 578, 962
BspCNI CTCAG 6 cut(s) 49, 375, 614, 724, 917, 1054
BspEI TCCGGA 1 cut(s) 342
BspLI GGNNCC 5 cut(s) 435, 834, 963, 1017, 1228
BspMI ACCTGC 1 cut(s) 1060
BspOI GCTAGC 1 cut(s) 903
BspPI GGATC 3 cut(s) 254, 644, 694
BspT107I GGYRCC 1 cut(s) 1015
BsrGI TGTACA 1 cut(s) 1098
BsrI ACTGG 2 cut(s) 311, 1173
BssECI CCNNGG 3 cut(s) 135, 192, 964
BssMI GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
BssT1I CCWWGG 1 cut(s) 135
Bst2UI CCWGG 5 cut(s) 193, 830, 896, 947, 966
Bst4CI ACNGT 5 cut(s) 274, 349, 1045, 1051, 1057
BstAPI GCANNNNNTGC 1 cut(s) 1075
BstAUI TGTACA 1 cut(s) 1098
BstC8I GCNNGC 2 cut(s) 901, 1112
BstDEI CTNAG 8 cut(s) 57, 240, 383, 601, 732, 767, 904, 1062
BstDSI CCRYGG 1 cut(s) 135
BstF5I GGATG 4 cut(s) 81, 101, 198, 384
BstKTI GATC 6 cut(s) 262, 412, 502, 652, 702, 1198
BstMAI GTCTC 5 cut(s) 30, 280, 540, 726, 989
BstMBI GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
BstMWI GCNNNNNNNGC 4 cut(s) 61, 735, 926, 1075
BstNI CCWGG 5 cut(s) 193, 830, 896, 947, 966
BstNSI RCATGY 2 cut(s) 1099, 1114
BstSCI CCNGG 5 cut(s) 191, 828, 894, 945, 964
BstSFI CTRYAG 1 cut(s) 792
BstV1I GCAGC 3 cut(s) 1078, 1090, 1126
BstV2I GAAGAC 2 cut(s) 307, 675
BstX2I RGATCY 2 cut(s) 649, 699
BstYI RGATCY 2 cut(s) 649, 699
BsuRI GGCC 4 cut(s) 97, 191, 578, 962
BtgI CCRYGG 1 cut(s) 135
BtsCI GGATG 4 cut(s) 81, 101, 198, 384
BtsI GCAGTG 3 cut(s) 744, 810, 865
BtsIMutI CAGTG 6 cut(s) 744, 810, 865, 1047, 1053, 1191
BveI ACCTGC 1 cut(s) 1060
Cac8I GCNNGC 2 cut(s) 901, 1112
CaiI CAGNNNCTG 1 cut(s) 418
Cfr13I GGNCC 4 cut(s) 95, 448, 961, 1156
Csp6I GTAC 2 cut(s) 87, 1099
CspCI CAANNNNNGTGG 2 cut(s) 799, 834
CviAII CATG 6 cut(s) 136, 788, 912, 1096, 1102, 1111
CviQI GTAC 2 cut(s) 87, 1099
DdeI CTNAG 8 cut(s) 57, 240, 383, 601, 732, 767, 904, 1062
DpnI GATC 6 cut(s) 261, 411, 501, 651, 701, 1197
DpnII GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
DrdI GACNNNNNNGTC 1 cut(s) 1003
DseDI GACNNNNNNGTC 1 cut(s) 1003
Eco130I CCWWGG 1 cut(s) 135
Eco47I GGWCC 2 cut(s) 448, 1156
Eco57I CTGAAG 3 cut(s) 693, 873, 915
EcoO109I RGGNCCY 1 cut(s) 448
EcoRI GAATTC 1 cut(s) 154
EcoRII CCWGG 5 cut(s) 191, 828, 894, 945, 964
EcoT14I CCWWGG 1 cut(s) 135
EcoT22I ATGCAT 1 cut(s) 1030
ErhI CCWWGG 1 cut(s) 135
FaeI CATG 6 cut(s) 139, 791, 915, 1099, 1105, 1114
FaqI GGGAC 1 cut(s) 209
FatI CATG 6 cut(s) 135, 787, 911, 1095, 1101, 1110
FauNDI CATATG 1 cut(s) 544
FbaI TGATCA 1 cut(s) 1195
FblI GTMKAC 1 cut(s) 1092
Fnu4HI GCNGC 3 cut(s) 1067, 1079, 1115
FokI GGATG 4 cut(s) 68, 88, 185, 391
Fsp4HI GCNGC 3 cut(s) 1067, 1079, 1115
FspBI CTAG 1 cut(s) 900
GluI GCNGC 3 cut(s) 1067, 1079, 1115
GsaI CCCAGC 3 cut(s) 96, 422, 518
GsuI CTGGAG 1 cut(s) 570
HaeIII GGCC 4 cut(s) 97, 191, 578, 962
HapII CCGG 1 cut(s) 343
Hin1II CATG 6 cut(s) 139, 791, 915, 1099, 1105, 1114
HincII GTYRAC 1 cut(s) 867
HindII GTYRAC 1 cut(s) 867
HindIII AAGCTT 3 cut(s) 799, 839, 1145
HpaII CCGG 1 cut(s) 343
HphI GGTGA 5 cut(s) 403, 549, 1004, 1114, 1158
Hpy166II GTNNAC 3 cut(s) 178, 867, 1093
Hpy188III TCNNGA 8 cut(s) 170, 263, 343, 404, 457, 805, 1061, 1179
Hpy8I GTNNAC 3 cut(s) 178, 867, 1093
HpyAV CCTTC 2 cut(s) 108, 897
HpyCH4III ACNGT 5 cut(s) 274, 349, 1045, 1051, 1057
HpyCH4IV ACGT 2 cut(s) 180, 564
HpyCH4V TGCA 7 cut(s) 213, 595, 1028, 1034, 1078, 1114, 1207
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 735, 926, 1075
HpyF3I CTNAG 8 cut(s) 57, 240, 383, 601, 732, 767, 904, 1062
HpySE526I ACGT 2 cut(s) 180, 564
Hsp92II CATG 6 cut(s) 139, 791, 915, 1099, 1105, 1114
Kpn2I TCCGGA 1 cut(s) 342
Ksp22I TGATCA 1 cut(s) 1195
Kzo9I GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
LmnI GCTCC 1 cut(s) 925
Lsp1109I GCAGC 3 cut(s) 1078, 1090, 1126
LweI GCATC 4 cut(s) 106, 369, 907, 1015
MaeI CTAG 1 cut(s) 900
MaeII ACGT 2 cut(s) 180, 564
MaeIII GTNAC 3 cut(s) 742, 1045, 1051
MalI GATC 6 cut(s) 261, 411, 501, 651, 701, 1197
MboI GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
MboII GAAGA 8 cut(s) 70, 307, 406, 419, 483, 680, 699, 1249
MfeI CAATTG 1 cut(s) 530
MflI RGATCY 2 cut(s) 649, 699
MhlI GDGCHC 1 cut(s) 1193
MluCI AATT 8 cut(s) 145, 154, 397, 530, 626, 713, 1118, 1183
MlyI GAGTC 5 cut(s) 593, 728, 830, 917, 1136
MmeI TCCRAC 1 cut(s) 96
MnlI CCTC 8 cut(s) 21, 166, 367, 371, 439, 461, 582, 589
Mph1103I ATGCAT 1 cut(s) 1030
MroI TCCGGA 1 cut(s) 342
MroXI GAANNNNTTC 2 cut(s) 479, 682
MseI TTAA 2 cut(s) 291, 696
MslI CAYNNNNRTG 1 cut(s) 1100
MspA1I CMGCKG 2 cut(s) 92, 1224
MspI CCGG 1 cut(s) 343
MspR9I CCNGG 5 cut(s) 193, 830, 896, 947, 966
MunI CAATTG 1 cut(s) 530
MvaI CCWGG 5 cut(s) 193, 830, 896, 947, 966
MwoI GCNNNNNNNGC 4 cut(s) 61, 735, 926, 1075
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 1 cut(s) 544
NdeII GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
NheI GCTAGC 1 cut(s) 899
NlaIII CATG 6 cut(s) 139, 791, 915, 1099, 1105, 1114
NlaIV GGNNCC 5 cut(s) 435, 834, 963, 1017, 1228
NmeAIII GCCGAG 1 cut(s) 637
NmuCI GTSAC 3 cut(s) 742, 1045, 1051
NsiI ATGCAT 1 cut(s) 1030
NspI RCATGY 2 cut(s) 1099, 1114
PaeI GCATGC 1 cut(s) 1114
PaqCI CACCTGC 1 cut(s) 1060
PciI ACATGT 1 cut(s) 1095
PdmI GAANNNNTTC 2 cut(s) 479, 682
PfeI GAWTC 6 cut(s) 353, 554, 845, 935, 1001, 1163
PflFI GACNNNGTC 1 cut(s) 326
PflMI CCANNNNNTGG 1 cut(s) 679
PkrI GCNGC 3 cut(s) 1068, 1080, 1116
PleI GAGTC 5 cut(s) 593, 727, 829, 916, 1135
PpsI GAGTC 5 cut(s) 593, 727, 829, 916, 1135
PpuMI RGGWCCY 1 cut(s) 448
PscI ACATGT 1 cut(s) 1095
PshBI ATTAAT 1 cut(s) 291
Psp5II RGGWCCY 1 cut(s) 448
Psp6I CCWGG 5 cut(s) 191, 828, 894, 945, 964
PspFI CCCAGC 3 cut(s) 92, 418, 514
PspGI CCWGG 5 cut(s) 191, 828, 894, 945, 964
PspN4I GGNNCC 5 cut(s) 435, 834, 963, 1017, 1228
PspPI GGNCC 4 cut(s) 95, 448, 961, 1156
PspPPI RGGWCCY 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 418
PsuI RGATCY 2 cut(s) 649, 699
PsyI GACNNNGTC 1 cut(s) 326
RsaI GTAC 2 cut(s) 88, 1100
RsaNI GTAC 2 cut(s) 87, 1099
RseI CAYNNNNRTG 1 cut(s) 1100
SaqAI TTAA 2 cut(s) 291, 696
SatI GCNGC 3 cut(s) 1067, 1079, 1115
Sau3AI GATC 6 cut(s) 259, 409, 499, 649, 699, 1195
Sau96I GGNCC 4 cut(s) 95, 448, 961, 1156
SchI GAGTC 5 cut(s) 593, 728, 830, 917, 1136
ScrFI CCNGG 5 cut(s) 193, 830, 896, 947, 966
SduI GDGCHC 1 cut(s) 1193
SfaNI GCATC 4 cut(s) 106, 369, 907, 1015
SfcI CTRYAG 1 cut(s) 792
SinI GGWCC 2 cut(s) 448, 1156
SmiMI CAYNNNNRTG 1 cut(s) 1100
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
SphI GCATGC 1 cut(s) 1114
Sse9I AATT 8 cut(s) 145, 154, 397, 530, 626, 713, 1118, 1183
SsiI CCGC 2 cut(s) 90, 1224
SspMI CTAG 1 cut(s) 900
StyD4I CCNGG 5 cut(s) 191, 828, 894, 945, 964
StyI CCWWGG 1 cut(s) 135
TaaI ACNGT 5 cut(s) 274, 349, 1045, 1051, 1057
TaiI ACGT 2 cut(s) 183, 567
TaqI TCGA 2 cut(s) 806, 1187
TasI AATT 8 cut(s) 145, 154, 397, 530, 626, 713, 1118, 1183
TatI WGTACW 1 cut(s) 1098
TfiI GAWTC 6 cut(s) 353, 554, 845, 935, 1001, 1163
Tru1I TTAA 2 cut(s) 291, 696
Tru9I TTAA 2 cut(s) 291, 696
TscAI CASTG 6 cut(s) 751, 817, 865, 1054, 1060, 1198
TseFI GTSAC 3 cut(s) 742, 1045, 1051
TseI GCWGC 3 cut(s) 1066, 1078, 1114
Tsp45I GTSAC 3 cut(s) 742, 1045, 1051
TspDTI ATGAA 9 cut(s) 70, 90, 173, 497, 681, 776, 870, 1118, 1157
TspGWI ACGGA 1 cut(s) 74
TspRI CASTG 6 cut(s) 751, 817, 865, 1054, 1060, 1198
Tth111I GACNNNGTC 1 cut(s) 326
Van91I CCANNNNNTGG 1 cut(s) 679
VpaK11BI GGWCC 2 cut(s) 448, 1156
VspI ATTAAT 1 cut(s) 291
XapI RAATTY 3 cut(s) 154, 713, 1183
XceI RCATGY 2 cut(s) 1099, 1114
XmiI GTMKAC 1 cut(s) 1092
XmnI GAANNNNTTC 2 cut(s) 479, 682
XspI CTAG 1 cut(s) 900
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.