Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0006102

Physical Location & Seq

Genomic Coordinates Reverse (-)

19806892 .. 19808391

Gene Structure 1500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0200100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGCTAAGCAAACAAGGATGGAGATTGGTGAAGAATCCGAATTCTTTAATTGCAAGACTGTATAAAGCTCTATATTTTCCTAATGGGGATTTCTTACATGCAGAGTTGGGTGCTCACCCTTCTTTTCCATGGCGTAGTATTTGGGAGGCCAGAGAGGTATTACTGAAGGGCCTCCGATGGCAGGTTGGAAATGGTGAAGATATTGATGTATGGAGAGACAACTGGTTACCAGATTCTTACCCACGTAGTCCATGTTCACCGCAACCGAGAGATGCCCCAACGAAAGTGTCTGAACTCATTCTCCCGGGAGCTAGAACTTGGGATGAAGACAAGATTGCTCAGTGGTTTTCACCGGTGGATAGGGAATTAATTCTTAAAATCCCACTCAGTCGACGTGCTCCAAGAGACAGGTTAGTGTGGCATTTTCATAAGAAAGGTGTCTTTACTACCAATAGTGCTTACTACGTGGCTCGTGATATATCACTGGGTTTAGTTTTGGCCCCTCCATCGATCCCGGATCCCTATTCTAGATTTTGGGATCCCTATTCTAGATTGTGGGCGGCTCTGTGGAATGCCACAGTCCCTAACAAGGTGGCTCTTCAGGCCTGGAGATCCTGTGTTAATATATTACCGACAAGATCTTGTTTAAGTACAAAAGGTTATGTGGGGGATATGGTTTGTCCTTTGTGTGGACATGGGATTGAGAATAATGTGCATCTTTTCATCCATTGTAATTATGCACGTGAAGTATGGGCAGCAGCAAACATTCAAGTACCCGCCATGCATGTCTTGGACGTGAAAGATTGGCTCCTACAGTTGGTGGGCAGCTTGAGTAAAGAGCAATTTGGCAAAGTTCTAATTCTTCTCTGGGCTATATGGAAAAATCGTAATACTCAGGTATGGGAAGGGACGAAGCAACATCCCTGTGATGCTGTGTTAATGGCTTTTGGCTGGCTAACAGAGTTTCTAAAAGCTAATAGTTGTGGAAAGCAATCTCGGGTGCAGAGACAAGATTGGGCAGTGCCTCAAGCAGGGTGGCTTAAATGCAATTCTGATGGAGCTTTTGTTGCGCAAGGTAATAGGGCTGGAATTGGAGTAGTTGTCCGAGACCATGATGGTCAATTTAGAGCAGCTGCAGCGAAGCCTATGAGGCATATCACTTCACCATTCCATGCCGAGTTAGCAGCCTTAATGGAAGGGGTCAAATTAGTTGAACGAATGAATCTGGAAAGGGTCATATTTGAAACAGATTGCGCCATCTTGGCAGCAGCAGTGAACCAGAATGAACATGATCTTTCCCTGCTCAGCTTTGTTCTTGAAGATTTAAAGGATCATGTTCATAGCTCTGTTGATTTCAAGGTGGTTTATGCTCCCCGTGAAGCCAATAAAGTAGCTCATATCCTAGCCAATAAAGCTCTTTGTAATAGTGTTGACCAAACTTGGTTTGGTACTGCTCCCAAATATATAAGGGATGCCATTCTAAACGAGTGTATTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

499

Amino Acids

56.54

Weight (kDa)

8.82

Isoelectric Point (pI)

42.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	183 - 251	1.4e-12	zinc-binding in reverse transcriptase
RVT_3	PF13456	350 - 472	1.5e-26	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006102)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50530 AT1G50570 AT1G50570 AT5G55530 AT5G55530 AT5G55530
fragaria_vesca	FvH4_3g23940 FvH4_3g23940 FvH4_3g23940 FvH4_3g23940 FvH4_3g23940
malus_domestica	MD03G1189600.v1.1 MD11G1205900.v1.1
prunus_persica	Prupe.4G231700_v2.0.a1 Prupe.4G231700_v2.0.a1
pyrus_communis	pycom11g17860
rosa_chinensis	RchiOBHm_Chr5g0042441
rosa_laevigata	RLG00000034126
rosa_multiflora	Rmu_sc0002779.1_g000006
rosa_roxburghii	Rroxscaffold_1G00038250
rosa_rugosa	Rorug05G0200100 Rorug05G0200200
rosa_samantha	Rh5AG286500 Rh5BG291000 Rh5CG323100 Rh5DG300700
rosa_wichuraiana	Rw5G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1071
Acc36I	ACCTGC	1 cut(s)	172
AccI	GTMKAC	1 cut(s)	391
AciI	CCGC	3 cut(s)	260, 560, 777
AclWI	GGATC	7 cut(s)	505, 512, 525, 533, 546, 606, 1338
AcsI	RAATTY	1 cut(s)	40
AcuI	CTGAAG	2 cut(s)	185, 584
AcvI	CACGTG	1 cut(s)	743
AfaI	GTAC	3 cut(s)	652, 774, 1450
AfiI	CCNNNNNNNGG	5 cut(s)	181, 589, 689, 817, 1031
AgeI	ACCGGT	1 cut(s)	352
AgsI	TTSAA	5 cut(s)	770, 1214, 1244, 1319, 1357
AjiI	CACGTC	2 cut(s)	395, 796
AjnI	CCWGG	1 cut(s)	605
AloI	GAACNNNNNNTCC	2 cut(s)	285, 317
Alw21I	GWGCWC	2 cut(s)	115, 400
Alw26I	GTCTC	4 cut(s)	210, 399, 1000, 1101
AlwI	GGATC	7 cut(s)	505, 512, 525, 533, 546, 606, 1338
Ama87I	CYCGRG	2 cut(s)	304, 996
AoxI	GGCC	4 cut(s)	147, 169, 498, 603
ApeKI	GCWGC	9 cut(s)	755, 758, 825, 1130, 1133, 1136, 1184, 1265, 1268
ApoI	RAATTY	1 cut(s)	40
AseI	ATTAAT	1 cut(s)	368
AsiGI	ACCGGT	1 cut(s)	352
Asp700I	GAANNNNTTC	2 cut(s)	297, 369
AspLEI	GCGC	2 cut(s)	1072, 1256
AspS9I	GGNCC	2 cut(s)	169, 499
AsuC2I	CCSGG	3 cut(s)	305, 306, 515
AsuHPI	GGTGA	6 cut(s)	40, 107, 206, 249, 342, 1155
AvaI	CYCGRG	2 cut(s)	304, 996
BamHI	GGATCC	2 cut(s)	517, 538
BauI	CACGAG	1 cut(s)	471
BbrPI	CACGTG	1 cut(s)	743
BbsI	GAAGAC	1 cut(s)	333
Bbv12I	GWGCWC	2 cut(s)	115, 400
BbvI	GCAGC	9 cut(s)	767, 770, 837, 1120, 1142, 1148, 1196, 1277, 1280
BccI	CCATC	6 cut(s)	12, 171, 514, 1049, 1109, 1265
BciT130I	CCWGG	1 cut(s)	607
BcnI	CCSGG	3 cut(s)	305, 306, 515
BcoDI	GTCTC	4 cut(s)	210, 399, 1000, 1101
BfaI	CTAG	4 cut(s)	312, 528, 549, 1403
BfmI	CTRYAG	2 cut(s)	812, 1134
BfuAI	ACCTGC	1 cut(s)	172
BglI	GCCNNNNNGGC	2 cut(s)	1150, 1262
BglII	AGATCT	1 cut(s)	638
BlpI	GCTNAGC	2 cut(s)	5, 1304
Bme1390I	CCNGG	4 cut(s)	305, 306, 515, 607
BmeT110I	CYCGRG	2 cut(s)	304, 996
BmgBI	CACGTC	2 cut(s)	395, 796
BmgT120I	GGNCC	2 cut(s)	169, 499
BmiI	GGNNCC	4 cut(s)	501, 519, 540, 809
BmrFI	CCNGG	4 cut(s)	305, 306, 515, 607
BmrI	ACTGGG	1 cut(s)	494
BmsI	GCATC	4 cut(s)	262, 724, 919, 1462
BmuI	ACTGGG	1 cut(s)	494
BpiI	GAAGAC	1 cut(s)	333
BpmI	CTGGAG	1 cut(s)	628
Bpu1102I	GCTNAGC	2 cut(s)	5, 1304
BpuEI	CTTGAG	2 cut(s)	850, 1011
BpuMI	CCSGG	3 cut(s)	305, 306, 515
Bsa29I	ATCGAT	1 cut(s)	509
BsaAI	YACGTR	3 cut(s)	245, 466, 743
BsaI	GGTCTC	1 cut(s)	1101
BsaJI	CCNNGG	2 cut(s)	128, 304
BsaWI	WCCGGW	1 cut(s)	352
BsaXI	ACNNNNNCTCC	8 cut(s)	285, 315, 601, 631, 1050, 1080, 1086, 1116
Bsc4I	CCNNNNNNNGG	5 cut(s)	181, 589, 689, 817, 1031
Bse118I	RCCGGY	1 cut(s)	352
Bse1I	ACTGG	2 cut(s)	227, 489
BseBI	CCWGG	1 cut(s)	607
BseCI	ATCGAT	1 cut(s)	509
BseDI	CCNNGG	2 cut(s)	128, 304
BseGI	GGATG	5 cut(s)	23, 328, 723, 919, 1477
BseLI	CCNNNNNNNGG	5 cut(s)	181, 589, 689, 817, 1031
BseMII	CTCAG	4 cut(s)	353, 400, 908, 1318
BseNI	ACTGG	2 cut(s)	227, 489
BseXI	GCAGC	9 cut(s)	767, 770, 837, 1120, 1142, 1148, 1196, 1277, 1280
BsgI	GTGCAG	1 cut(s)	1022
BshFI	GGCC	4 cut(s)	149, 171, 500, 605
BshTI	ACCGGT	1 cut(s)	352
BshVI	ATCGAT	1 cut(s)	509
BsiHKAI	GWGCWC	2 cut(s)	115, 400
BsiHKCI	CYCGRG	2 cut(s)	304, 996
BsiSI	CCGG	3 cut(s)	305, 353, 515
BslFI	GGGAC	2 cut(s)	566, 922
BslI	CCNNNNNNNGG	5 cut(s)	181, 589, 689, 817, 1031
BsmAI	GTCTC	4 cut(s)	210, 399, 1000, 1101
BsmFI	GGGAC	2 cut(s)	566, 922
BsmI	GAATGC	1 cut(s)	577
BsnI	GGCC	4 cut(s)	149, 171, 500, 605
Bso31I	GGTCTC	1 cut(s)	1101
BsoBI	CYCGRG	2 cut(s)	304, 996
Bsp1286I	GDGCHC	2 cut(s)	115, 400
Bsp143I	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
Bsp1720I	GCTNAGC	2 cut(s)	5, 1304
Bsp19I	CCATGG	1 cut(s)	128
BspACI	CCGC	3 cut(s)	260, 560, 777
BspANI	GGCC	4 cut(s)	149, 171, 500, 605
BspCNI	CTCAG	4 cut(s)	352, 399, 907, 1317
BspDI	ATCGAT	1 cut(s)	509
BspLI	GGNNCC	4 cut(s)	501, 519, 540, 809
BspMAI	CTGCAG	1 cut(s)	1138
BspMI	ACCTGC	1 cut(s)	172
BspPI	GGATC	7 cut(s)	505, 512, 525, 533, 546, 606, 1338
BspQI	GCTCTTC	1 cut(s)	603
BspTNI	GGTCTC	1 cut(s)	1101
BsrFI	RCCGGY	1 cut(s)	352
BsrI	ACTGG	2 cut(s)	227, 489
BssAI	RCCGGY	1 cut(s)	352
BssECI	CCNNGG	2 cut(s)	128, 304
BssMI	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
BssSI	CACGAG	1 cut(s)	471
BssT1I	CCWWGG	1 cut(s)	128
Bst2BI	CACGAG	1 cut(s)	471
Bst2UI	CCWGG	1 cut(s)	607
Bst4CI	ACNGT	3 cut(s)	60, 580, 816
Bst6I	CTCTTC	1 cut(s)	603
BstBAI	YACGTR	3 cut(s)	245, 466, 743
BstC8I	GCNNGC	1 cut(s)	953
BstDEI	CTNAG	5 cut(s)	5, 339, 386, 894, 1304
BstDSI	CCRYGG	1 cut(s)	128
BstEII	GGTNACC	1 cut(s)	225
BstENI	CCTNNNNNAGG	1 cut(s)	1029
BstF5I	GGATG	5 cut(s)	23, 328, 723, 919, 1477
BstHHI	GCGC	2 cut(s)	1072, 1256
BstKTI	GATC	7 cut(s)	513, 520, 541, 614, 641, 1294, 1333
BstMAI	GTCTC	4 cut(s)	210, 399, 1000, 1101
BstMBI	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
BstMWI	GCNNNNNNNGC	7 cut(s)	602, 1067, 1136, 1150, 1181, 1262, 1412
BstNI	CCWGG	1 cut(s)	607
BstNSI	RCATGY	2 cut(s)	101, 788
BstPI	GGTNACC	1 cut(s)	225
BstSCI	CCNGG	4 cut(s)	303, 304, 513, 605
BstSFI	CTRYAG	2 cut(s)	812, 1134
BstV1I	GCAGC	9 cut(s)	767, 770, 837, 1120, 1142, 1148, 1196, 1277, 1280
BstV2I	GAAGAC	1 cut(s)	333
BstX2I	RGATCY	4 cut(s)	517, 538, 611, 638
BstYI	RGATCY	4 cut(s)	517, 538, 611, 638
Bsu15I	ATCGAT	1 cut(s)	509
BsuRI	GGCC	4 cut(s)	149, 171, 500, 605
BsuTUI	ATCGAT	1 cut(s)	509
BtgI	CCRYGG	1 cut(s)	128
BtrI	CACGTC	2 cut(s)	395, 796
BtsCI	GGATG	5 cut(s)	23, 328, 723, 919, 1477
BtsI	GCAGTG	2 cut(s)	1026, 1278
BtsIMutI	CAGTG	4 cut(s)	347, 482, 1026, 1278
BveI	ACCTGC	1 cut(s)	172
Cac8I	GCNNGC	1 cut(s)	953
CfoI	GCGC	2 cut(s)	1072, 1256
Cfr10I	RCCGGY	1 cut(s)	352
Cfr13I	GGNCC	2 cut(s)	169, 499
Cfr9I	CCCGGG	1 cut(s)	304
ClaI	ATCGAT	1 cut(s)	509
Csp6I	GTAC	3 cut(s)	651, 773, 1449
CspAI	ACCGGT	1 cut(s)	352
CspCI	CAANNNNNGTGG	2 cut(s)	1016, 1051
CviQI	GTAC	3 cut(s)	651, 773, 1449
DdeI	CTNAG	5 cut(s)	5, 339, 386, 894, 1304
DpnI	GATC	7 cut(s)	512, 519, 540, 613, 640, 1293, 1332
DpnII	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
DraI	TTTAAA	1 cut(s)	1326
Eam1104I	CTCTTC	1 cut(s)	603
EarI	CTCTTC	1 cut(s)	603
Eco130I	CCWWGG	1 cut(s)	128
Eco147I	AGGCCT	1 cut(s)	605
Eco31I	GGTCTC	1 cut(s)	1101
Eco57I	CTGAAG	2 cut(s)	185, 584
Eco72I	CACGTG	1 cut(s)	743
Eco88I	CYCGRG	2 cut(s)	304, 996
Eco91I	GGTNACC	1 cut(s)	225
EcoNI	CCTNNNNNAGG	1 cut(s)	1029
EcoO109I	RGGNCCY	1 cut(s)	169
EcoO65I	GGTNACC	1 cut(s)	225
EcoRI	GAATTC	1 cut(s)	40
EcoRII	CCWGG	1 cut(s)	605
EcoT14I	CCWWGG	1 cut(s)	128
EcoT22I	ATGCAT	1 cut(s)	786
ErhI	CCWWGG	1 cut(s)	128
FaqI	GGGAC	2 cut(s)	566, 922
FauI	CCCGC	1 cut(s)	784
FblI	GTMKAC	1 cut(s)	391
FokI	GGATG	5 cut(s)	30, 335, 710, 906, 1484
FspBI	CTAG	4 cut(s)	312, 528, 549, 1403
FspI	TGCGCA	1 cut(s)	1071
GlaI	GCGC	2 cut(s)	1071, 1255
GsuI	CTGGAG	1 cut(s)	628
HaeIII	GGCC	4 cut(s)	149, 171, 500, 605
HapII	CCGG	3 cut(s)	305, 353, 515
HhaI	GCGC	2 cut(s)	1072, 1256
Hin6I	GCGC	2 cut(s)	1070, 1254
HinP1I	GCGC	2 cut(s)	1070, 1254
HincII	GTYRAC	2 cut(s)	392, 1432
HindII	GTYRAC	2 cut(s)	392, 1432
HinfI	GANTC	3 cut(s)	34, 233, 1222
HpaII	CCGG	3 cut(s)	305, 353, 515
HphI	GGTGA	6 cut(s)	40, 107, 206, 249, 342, 1155
Hpy166II	GTNNAC	5 cut(s)	257, 392, 692, 1276, 1432
Hpy188I	TCNGA	5 cut(s)	39, 176, 292, 1054, 1106
Hpy188III	TCNNGA	5 cut(s)	473, 528, 549, 1226, 1316
Hpy8I	GTNNAC	5 cut(s)	257, 392, 692, 1276, 1432
Hpy99I	CGWCG	1 cut(s)	396
HpyAV	CCTTC	4 cut(s)	129, 160, 899, 1190
HpyCH4III	ACNGT	3 cut(s)	60, 580, 816
HpyCH4IV	ACGT	5 cut(s)	244, 394, 465, 742, 795
HpyCH4V	TGCA	8 cut(s)	53, 101, 715, 740, 784, 1003, 1047, 1136
HpyF10VI	GCNNNNNNNGC	7 cut(s)	602, 1067, 1136, 1150, 1181, 1262, 1412
HpyF3I	CTNAG	5 cut(s)	5, 339, 386, 894, 1304
HpySE526I	ACGT	5 cut(s)	244, 394, 465, 742, 795
HspAI	GCGC	2 cut(s)	1070, 1254
Kzo9I	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
LguI	GCTCTTC	1 cut(s)	603
LmnI	GCTCC	6 cut(s)	308, 403, 813, 1058, 1375, 1459
Lsp1109I	GCAGC	9 cut(s)	767, 770, 837, 1120, 1142, 1148, 1196, 1277, 1280
LweI	GCATC	4 cut(s)	262, 724, 919, 1462
MaeI	CTAG	4 cut(s)	312, 528, 549, 1403
MaeII	ACGT	5 cut(s)	244, 394, 465, 742, 795
MaeIII	GTNAC	1 cut(s)	225
MalI	GATC	7 cut(s)	512, 519, 540, 613, 640, 1293, 1332
MboI	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
MboII	GAAGA	6 cut(s)	43, 209, 338, 590, 854, 1331
MflI	RGATCY	4 cut(s)	517, 538, 611, 638
MhlI	GDGCHC	2 cut(s)	115, 400
MmeI	TCCRAC	1 cut(s)	166
MnlI	CCTC	6 cut(s)	139, 148, 182, 513, 1035, 1143
Mph1103I	ATGCAT	1 cut(s)	786
MroXI	GAANNNNTTC	2 cut(s)	297, 369
MslI	CAYNNNNRTG	1 cut(s)	924
MspA1I	CMGCKG	1 cut(s)	1133
MspI	CCGG	3 cut(s)	305, 353, 515
MspR9I	CCNGG	4 cut(s)	305, 306, 515, 607
Mva1269I	GAATGC	1 cut(s)	577
MvaI	CCWGG	1 cut(s)	607
MwoI	GCNNNNNNNGC	7 cut(s)	602, 1067, 1136, 1150, 1181, 1262, 1412
NciI	CCSGG	3 cut(s)	305, 306, 515
NcoI	CCATGG	1 cut(s)	128
NdeII	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
NlaIV	GGNNCC	4 cut(s)	501, 519, 540, 809
NmeAIII	GCCGAG	1 cut(s)	1201
NsbI	TGCGCA	1 cut(s)	1071
NsiI	ATGCAT	1 cut(s)	786
NspI	RCATGY	2 cut(s)	101, 788
PceI	AGGCCT	1 cut(s)	605
PciSI	GCTCTTC	1 cut(s)	603
PctI	GAATGC	1 cut(s)	577
PdmI	GAANNNNTTC	2 cut(s)	297, 369
PfeI	GAWTC	3 cut(s)	34, 233, 1222
PfoI	TCCNGGA	1 cut(s)	513
PinAI	ACCGGT	1 cut(s)	352
PmaCI	CACGTG	1 cut(s)	743
PmlI	CACGTG	1 cut(s)	743
Ppu21I	YACGTR	3 cut(s)	245, 466, 743
PshBI	ATTAAT	1 cut(s)	368
Psp6I	CCWGG	1 cut(s)	605
PspCI	CACGTG	1 cut(s)	743
PspEI	GGTNACC	1 cut(s)	225
PspGI	CCWGG	1 cut(s)	605
PspN4I	GGNNCC	4 cut(s)	501, 519, 540, 809
PspPI	GGNCC	2 cut(s)	169, 499
PsrI	GAACNNNNNNTAC	2 cut(s)	238, 270
PstI	CTGCAG	1 cut(s)	1138
PsuI	RGATCY	4 cut(s)	517, 538, 611, 638
PvuII	CAGCTG	1 cut(s)	1133
RsaI	GTAC	3 cut(s)	652, 774, 1450
RsaNI	GTAC	3 cut(s)	651, 773, 1449
RseI	CAYNNNNRTG	1 cut(s)	924
SalI	GTCGAC	1 cut(s)	390
SapI	GCTCTTC	1 cut(s)	603
Sau3AI	GATC	7 cut(s)	510, 517, 538, 611, 638, 1291, 1330
Sau96I	GGNCC	2 cut(s)	169, 499
ScrFI	CCNGG	4 cut(s)	305, 306, 515, 607
SduI	GDGCHC	2 cut(s)	115, 400
SfaNI	GCATC	4 cut(s)	262, 724, 919, 1462
SfcI	CTRYAG	2 cut(s)	812, 1134
SgrAI	CRCCGGYG	1 cut(s)	352
SmaI	CCCGGG	1 cut(s)	306
SmiMI	CAYNNNNRTG	1 cut(s)	924
SmlI	CTYRAG	2 cut(s)	829, 1026
SmoI	CTYRAG	2 cut(s)	829, 1026
SseBI	AGGCCT	1 cut(s)	605
SsiI	CCGC	3 cut(s)	260, 560, 777
SspMI	CTAG	4 cut(s)	312, 528, 549, 1403
StuI	AGGCCT	1 cut(s)	605
StyD4I	CCNGG	4 cut(s)	303, 304, 513, 605
StyI	CCWWGG	1 cut(s)	128
TaaI	ACNGT	3 cut(s)	60, 580, 816
TaiI	ACGT	5 cut(s)	247, 397, 468, 745, 798
TaqI	TCGA	2 cut(s)	391, 509
TatI	WGTACW	1 cut(s)	650
TauI	GCSGC	1 cut(s)	563
TfiI	GAWTC	3 cut(s)	34, 233, 1222
TscAI	CASTG	4 cut(s)	347, 489, 1026, 1278
TseI	GCWGC	9 cut(s)	755, 758, 825, 1130, 1133, 1136, 1184, 1265, 1268
TspDTI	ATGAA	6 cut(s)	339, 416, 712, 1235, 1299, 1328
TspMI	CCCGGG	1 cut(s)	304
TspRI	CASTG	4 cut(s)	347, 489, 1026, 1278
VspI	ATTAAT	1 cut(s)	368
XagI	CCTNNNNNAGG	1 cut(s)	1029
XapI	RAATTY	1 cut(s)	40
XbaI	TCTAGA	2 cut(s)	527, 548
XceI	RCATGY	2 cut(s)	101, 788
XcmI	CCANNNNNNNNNTGG	2 cut(s)	787, 1442
XmaI	CCCGGG	1 cut(s)	304
XmiI	GTMKAC	1 cut(s)	391
XmnI	GAANNNNTTC	2 cut(s)	297, 369
XspI	CTAG	4 cut(s)	312, 528, 549, 1403
Zsp2I	ATGCAT	1 cut(s)	786

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.