Regulator of chromosome condensation (RCC1) repeat
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08710 AT5G08710 |
| fragaria_vesca | FvH4_1g25640 FvH4_1g25640 FvH4_1g25640 FvH4_1g25640 FvH4_1g25640 FvH4_1g25640 FvH4_1g25640 FvH4_1g25640 |
| malus_domestica | MD00G1127500.v1.1 |
| prunus_persica | Prupe.4G282400_v2.0.a1 Prupe.4G282400_v2.0.a1 Prupe.4G282400_v2.0.a1 Prupe.4G282400_v2.0.a1 Prupe.4G282400_v2.0.a1 Prupe.4G282400_v2.0.a1 |
| pyrus_communis | pycom520g00430 pycom520g00440 |
| rosa_chinensis | RchiOBHm_Chr2g0123961 |
| rosa_laevigata | RLG00000018778 |
| rosa_multiflora | Rmu_sc0000452.1_g000003 Rmu_sc0002845.1_g000025 |
| rosa_roxburghii | Rroxscaffold_2G00120200 |
| rosa_rugosa | Rorug02G0248300 |
| rosa_samantha | Rh2AG307200 Rh2BG316200 Rh2CG293900 Rh2DG330800 |
| rosa_wichuraiana | Rw2G024740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1122 |
| AccB1I | GGYRCC | 1 cut(s) | 924 |
| AccBSI | CCGCTC | 2 cut(s) | 261, 479 |
| AccI | GTMKAC | 1 cut(s) | 1095 |
| AciI | CCGC | 5 cut(s) | 113, 231, 259, 268, 479 |
| AclWI | GGATC | 4 cut(s) | 113, 559, 762, 775 |
| AcoI | YGGCCR | 2 cut(s) | 265, 628 |
| AcsI | RAATTY | 3 cut(s) | 31, 378, 651 |
| AcuI | CTGAAG | 1 cut(s) | 1062 |
| AdeI | CACNNNGTG | 1 cut(s) | 565 |
| AfaI | GTAC | 6 cut(s) | 431, 664, 899, 940, 1222, 1227 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 597 |
| AflII | CTTAAG | 1 cut(s) | 592 |
| AflIII | ACRYGT | 1 cut(s) | 432 |
| AgsI | TTSAA | 9 cut(s) | 218, 377, 512, 658, 704, 912, 988, 1210, 1232 |
| AjnI | CCWGG | 1 cut(s) | 665 |
| AleI | CACNNNNGTG | 1 cut(s) | 402 |
| AluBI | AGCT | 7 cut(s) | 156, 304, 326, 386, 545, 794, 837 |
| AluI | AGCT | 7 cut(s) | 156, 304, 326, 386, 545, 794, 837 |
| Alw21I | GWGCWC | 2 cut(s) | 561, 796 |
| Alw26I | GTCTC | 2 cut(s) | 290, 885 |
| AlwI | GGATC | 4 cut(s) | 113, 559, 762, 775 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 569 |
| Ama87I | CYCGRG | 1 cut(s) | 149 |
| AoxI | GGCC | 3 cut(s) | 265, 463, 628 |
| ApeKI | GCWGC | 5 cut(s) | 110, 542, 728, 739, 1031 |
| ApoI | RAATTY | 3 cut(s) | 31, 378, 651 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 372, 969, 1087 |
| AspLEI | GCGC | 1 cut(s) | 239 |
| AspS9I | GGNCC | 4 cut(s) | 463, 708, 815, 977 |
| AsuHPI | GGTGA | 2 cut(s) | 58, 520 |
| AvaI | CYCGRG | 1 cut(s) | 149 |
| AvaII | GGWCC | 3 cut(s) | 708, 815, 977 |
| BalI | TGGCCA | 1 cut(s) | 630 |
| BamHI | GGATCC | 1 cut(s) | 767 |
| BanI | GGYRCC | 1 cut(s) | 924 |
| BanII | GRGCYC | 2 cut(s) | 150, 796 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 480, 512 |
| BbsI | GAAGAC | 1 cut(s) | 622 |
| Bbv12I | GWGCWC | 2 cut(s) | 561, 796 |
| BbvCI | CCTCAGC | 1 cut(s) | 193 |
| BbvI | GCAGC | 5 cut(s) | 122, 554, 715, 726, 1043 |
| BccI | CCATC | 3 cut(s) | 230, 532, 572 |
| BceAI | ACGGC | 1 cut(s) | 701 |
| BciT130I | CCWGG | 1 cut(s) | 667 |
| BcoDI | GTCTC | 2 cut(s) | 290, 885 |
| BfaI | CTAG | 2 cut(s) | 647, 797 |
| BfmI | CTRYAG | 3 cut(s) | 942, 1029, 1092 |
| BfoI | RGCGCY | 1 cut(s) | 240 |
| BfrI | CTTAAG | 1 cut(s) | 592 |
| BisI | GCNGC | 7 cut(s) | 111, 268, 480, 543, 729, 740, 1032 |
| BlsI | GCNGC | 7 cut(s) | 112, 269, 481, 544, 730, 741, 1033 |
| Bme1390I | CCNGG | 1 cut(s) | 667 |
| Bme18I | GGWCC | 3 cut(s) | 708, 815, 977 |
| BmeT110I | CYCGRG | 1 cut(s) | 149 |
| BmgT120I | GGNCC | 4 cut(s) | 463, 708, 815, 977 |
| BmiI | GGNNCC | 5 cut(s) | 709, 769, 926, 978, 1075 |
| BmrFI | CCNGG | 1 cut(s) | 667 |
| BmrI | ACTGGG | 1 cut(s) | 470 |
| BmuI | ACTGGG | 1 cut(s) | 470 |
| BpiI | GAAGAC | 1 cut(s) | 622 |
| BpmI | CTGGAG | 1 cut(s) | 1131 |
| Bpu10I | CCTNAGC | 1 cut(s) | 193 |
| BsaBI | GATNNNNATC | 1 cut(s) | 951 |
| BsaI | GGTCTC | 2 cut(s) | 290, 885 |
| BsaJI | CCNNGG | 6 cut(s) | 466, 683, 711, 818, 928, 1078 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 597 |
| Bse1I | ACTGG | 3 cut(s) | 286, 465, 1222 |
| Bse8I | GATNNNNATC | 1 cut(s) | 951 |
| BseBI | CCWGG | 1 cut(s) | 667 |
| BseDI | CCNNGG | 6 cut(s) | 466, 683, 711, 818, 928, 1078 |
| BseJI | GATNNNNATC | 1 cut(s) | 951 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 597 |
| BseMII | CTCAG | 4 cut(s) | 179, 207, 576, 852 |
| BseNI | ACTGG | 3 cut(s) | 286, 465, 1222 |
| BseRI | GAGGAG | 3 cut(s) | 98, 618, 835 |
| BseX3I | CGGCCG | 1 cut(s) | 265 |
| BseXI | GCAGC | 5 cut(s) | 122, 554, 715, 726, 1043 |
| BseYI | CCCAGC | 2 cut(s) | 386, 833 |
| Bsh1285I | CGRYCG | 1 cut(s) | 268 |
| BshFI | GGCC | 3 cut(s) | 267, 465, 630 |
| BshNI | GGYRCC | 1 cut(s) | 924 |
| BsiEI | CGRYCG | 1 cut(s) | 268 |
| BsiHKAI | GWGCWC | 2 cut(s) | 561, 796 |
| BsiHKCI | CYCGRG | 1 cut(s) | 149 |
| BsiSI | CCGG | 1 cut(s) | 264 |
| BslFI | GGGAC | 2 cut(s) | 143, 721 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 597 |
| BsmAI | GTCTC | 2 cut(s) | 290, 885 |
| BsmFI | GGGAC | 2 cut(s) | 143, 721 |
| BsmI | GAATGC | 4 cut(s) | 518, 642, 741, 742 |
| BsnI | GGCC | 3 cut(s) | 267, 465, 630 |
| Bso31I | GGTCTC | 2 cut(s) | 290, 885 |
| BsoBI | CYCGRG | 1 cut(s) | 149 |
| Bsp1286I | GDGCHC | 3 cut(s) | 150, 561, 796 |
| Bsp1407I | TGTACA | 2 cut(s) | 429, 897 |
| Bsp143I | GATC | 3 cut(s) | 105, 551, 767 |
| Bsp19I | CCATGG | 1 cut(s) | 1078 |
| BspACI | CCGC | 5 cut(s) | 113, 231, 259, 268, 479 |
| BspANI | GGCC | 3 cut(s) | 267, 465, 630 |
| BspCNI | CTCAG | 4 cut(s) | 178, 206, 575, 851 |
| BspHI | TCATGA | 1 cut(s) | 313 |
| BspLI | GGNNCC | 5 cut(s) | 709, 769, 926, 978, 1075 |
| BspMAI | CTGCAG | 1 cut(s) | 1033 |
| BspPI | GGATC | 4 cut(s) | 113, 559, 762, 775 |
| BspT107I | GGYRCC | 1 cut(s) | 924 |
| BspTI | CTTAAG | 1 cut(s) | 592 |
| BspTNI | GGTCTC | 2 cut(s) | 290, 885 |
| BsrBI | CCGCTC | 2 cut(s) | 261, 479 |
| BsrGI | TGTACA | 2 cut(s) | 429, 897 |
| BsrI | ACTGG | 3 cut(s) | 286, 465, 1222 |
| BssECI | CCNNGG | 6 cut(s) | 466, 683, 711, 818, 928, 1078 |
| BssMI | GATC | 3 cut(s) | 105, 551, 767 |
| BssT1I | CCWWGG | 3 cut(s) | 711, 928, 1078 |
| Bst2UI | CCWGG | 1 cut(s) | 667 |
| Bst4CI | ACNGT | 2 cut(s) | 902, 1225 |
| Bst6I | CTCTTC | 3 cut(s) | 95, 254, 501 |
| BstAFI | CTTAAG | 1 cut(s) | 592 |
| BstAUI | TGTACA | 2 cut(s) | 429, 897 |
| BstC8I | GCNNGC | 3 cut(s) | 177, 229, 751 |
| BstDEI | CTNAG | 4 cut(s) | 165, 193, 562, 838 |
| BstDSI | CCRYGG | 2 cut(s) | 683, 1078 |
| BstH2I | RGCGCY | 1 cut(s) | 240 |
| BstHHI | GCGC | 1 cut(s) | 239 |
| BstKTI | GATC | 3 cut(s) | 108, 554, 770 |
| BstMAI | GTCTC | 2 cut(s) | 290, 885 |
| BstMBI | GATC | 3 cut(s) | 105, 551, 767 |
| BstMCI | CGRYCG | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 210, 267, 413 |
| BstNI | CCWGG | 1 cut(s) | 667 |
| BstNSI | RCATGY | 4 cut(s) | 436, 753, 855, 873 |
| BstSCI | CCNGG | 1 cut(s) | 665 |
| BstSFI | CTRYAG | 3 cut(s) | 942, 1029, 1092 |
| BstV1I | GCAGC | 5 cut(s) | 122, 554, 715, 726, 1043 |
| BstV2I | GAAGAC | 1 cut(s) | 622 |
| BstX2I | RGATCY | 1 cut(s) | 767 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 538 |
| BstYI | RGATCY | 1 cut(s) | 767 |
| BstZI | CGGCCG | 1 cut(s) | 265 |
| BsuRI | GGCC | 3 cut(s) | 267, 465, 630 |
| BtgI | CCRYGG | 2 cut(s) | 683, 1078 |
| BtgZI | GCGATG | 1 cut(s) | 208 |
| BtsI | GCAGTG | 2 cut(s) | 73, 79 |
| BtsIMutI | CAGTG | 5 cut(s) | 73, 79, 173, 570, 1215 |
| Cac8I | GCNNGC | 3 cut(s) | 177, 229, 751 |
| CaiI | CAGNNNCTG | 1 cut(s) | 569 |
| CciI | TCATGA | 1 cut(s) | 313 |
| CfoI | GCGC | 1 cut(s) | 239 |
| Cfr13I | GGNCC | 4 cut(s) | 463, 708, 815, 977 |
| CseI | GACGC | 1 cut(s) | 862 |
| CsiI | ACCWGGT | 1 cut(s) | 665 |
| Csp6I | GTAC | 6 cut(s) | 430, 663, 898, 939, 1221, 1226 |
| CviQI | GTAC | 6 cut(s) | 430, 663, 898, 939, 1221, 1226 |
| DdeI | CTNAG | 4 cut(s) | 165, 193, 562, 838 |
| DpnI | GATC | 3 cut(s) | 107, 553, 769 |
| DpnII | GATC | 3 cut(s) | 105, 551, 767 |
| DraIII | CACNNNGTG | 1 cut(s) | 565 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1122 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1122 |
| EaeI | YGGCCR | 2 cut(s) | 265, 628 |
| EagI | CGGCCG | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 3 cut(s) | 95, 254, 501 |
| EarI | CTCTTC | 3 cut(s) | 95, 254, 501 |
| Ecl136II | GAGCTC | 1 cut(s) | 794 |
| EclXI | CGGCCG | 1 cut(s) | 265 |
| Eco130I | CCWWGG | 3 cut(s) | 711, 928, 1078 |
| Eco24I | GRGCYC | 2 cut(s) | 150, 796 |
| Eco31I | GGTCTC | 2 cut(s) | 290, 885 |
| Eco47I | GGWCC | 3 cut(s) | 708, 815, 977 |
| Eco52I | CGGCCG | 1 cut(s) | 265 |
| Eco53kI | GAGCTC | 1 cut(s) | 794 |
| Eco57I | CTGAAG | 1 cut(s) | 1062 |
| Eco88I | CYCGRG | 1 cut(s) | 149 |
| EcoICRI | GAGCTC | 1 cut(s) | 794 |
| EcoO109I | RGGNCCY | 1 cut(s) | 977 |
| EcoRII | CCWGG | 1 cut(s) | 665 |
| EcoT14I | CCWWGG | 3 cut(s) | 711, 928, 1078 |
| EcoT22I | ATGCAT | 1 cut(s) | 755 |
| EcoT38I | GRGCYC | 2 cut(s) | 150, 796 |
| ErhI | CCWWGG | 3 cut(s) | 711, 928, 1078 |
| FaqI | GGGAC | 2 cut(s) | 143, 721 |
| FauI | CCCGC | 1 cut(s) | 266 |
| FblI | GTMKAC | 1 cut(s) | 1095 |
| Fnu4HI | GCNGC | 7 cut(s) | 111, 268, 480, 543, 729, 740, 1032 |
| FriOI | GRGCYC | 2 cut(s) | 150, 796 |
| Fsp4HI | GCNGC | 7 cut(s) | 111, 268, 480, 543, 729, 740, 1032 |
| FspBI | CTAG | 2 cut(s) | 647, 797 |
| GlaI | GCGC | 1 cut(s) | 238 |
| GluI | GCNGC | 7 cut(s) | 111, 268, 480, 543, 729, 740, 1032 |
| GsaI | CCCAGC | 2 cut(s) | 390, 837 |
| GsuI | CTGGAG | 1 cut(s) | 1131 |
| HaeII | RGCGCY | 1 cut(s) | 240 |
| HaeIII | GGCC | 3 cut(s) | 267, 465, 630 |
| HapII | CCGG | 1 cut(s) | 264 |
| HgaI | GACGC | 1 cut(s) | 862 |
| HhaI | GCGC | 1 cut(s) | 239 |
| Hin6I | GCGC | 1 cut(s) | 237 |
| HinP1I | GCGC | 1 cut(s) | 237 |
| HincII | GTYRAC | 1 cut(s) | 1141 |
| HindII | GTYRAC | 1 cut(s) | 1141 |
| HinfI | GANTC | 5 cut(s) | 161, 525, 587, 635, 1206 |
| HpaII | CCGG | 1 cut(s) | 264 |
| HphI | GGTGA | 2 cut(s) | 58, 520 |
| Hpy166II | GTNNAC | 2 cut(s) | 1096, 1141 |
| Hpy188I | TCNGA | 4 cut(s) | 470, 556, 841, 1042 |
| Hpy188III | TCNNGA | 8 cut(s) | 151, 314, 354, 612, 694, 797, 813, 1110 |
| Hpy8I | GTNNAC | 2 cut(s) | 1096, 1141 |
| HpyAV | CCTTC | 5 cut(s) | 48, 88, 413, 698, 1037 |
| HpyCH4III | ACNGT | 2 cut(s) | 902, 1225 |
| HpyCH4V | TGCA | 6 cut(s) | 12, 278, 742, 753, 851, 1031 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 210, 267, 413 |
| HpyF3I | CTNAG | 4 cut(s) | 165, 193, 562, 838 |
| HspAI | GCGC | 1 cut(s) | 237 |
| Kzo9I | GATC | 3 cut(s) | 105, 551, 767 |
| LmnI | GCTCC | 3 cut(s) | 153, 266, 822 |
| Lsp1109I | GCAGC | 5 cut(s) | 122, 554, 715, 726, 1043 |
| MabI | ACCWGGT | 1 cut(s) | 665 |
| MaeI | CTAG | 2 cut(s) | 647, 797 |
| MaeIII | GTNAC | 1 cut(s) | 1162 |
| MalI | GATC | 3 cut(s) | 107, 553, 769 |
| MbiI | CCGCTC | 2 cut(s) | 261, 479 |
| MboI | GATC | 3 cut(s) | 105, 551, 767 |
| MfeI | CAATTG | 1 cut(s) | 1118 |
| MflI | RGATCY | 1 cut(s) | 767 |
| MhlI | GDGCHC | 3 cut(s) | 150, 561, 796 |
| MlsI | TGGCCA | 1 cut(s) | 630 |
| MluCI | AATT | 8 cut(s) | 31, 357, 369, 378, 425, 651, 1035, 1118 |
| MluNI | TGGCCA | 1 cut(s) | 630 |
| MlyI | GAGTC | 2 cut(s) | 155, 596 |
| MmeI | TCCRAC | 2 cut(s) | 524, 998 |
| Mox20I | TGGCCA | 1 cut(s) | 630 |
| Mph1103I | ATGCAT | 1 cut(s) | 755 |
| MroXI | GAANNNNTTC | 3 cut(s) | 372, 969, 1087 |
| MscI | TGGCCA | 1 cut(s) | 630 |
| MseI | TTAA | 4 cut(s) | 254, 593, 717, 878 |
| MslI | CAYNNNNRTG | 2 cut(s) | 402, 536 |
| Msp20I | TGGCCA | 1 cut(s) | 630 |
| MspA1I | CMGCKG | 2 cut(s) | 113, 386 |
| MspCI | CTTAAG | 1 cut(s) | 592 |
| MspI | CCGG | 1 cut(s) | 264 |
| MspR9I | CCNGG | 1 cut(s) | 667 |
| MunI | CAATTG | 1 cut(s) | 1118 |
| Mva1269I | GAATGC | 4 cut(s) | 518, 642, 741, 742 |
| MvaI | CCWGG | 1 cut(s) | 667 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 210, 267, 413 |
| NcoI | CCATGG | 1 cut(s) | 1078 |
| NdeII | GATC | 3 cut(s) | 105, 551, 767 |
| NlaIV | GGNNCC | 5 cut(s) | 709, 769, 926, 978, 1075 |
| NsiI | ATGCAT | 1 cut(s) | 755 |
| NspI | RCATGY | 4 cut(s) | 436, 753, 855, 873 |
| OliI | CACNNNNGTG | 1 cut(s) | 402 |
| PaeI | GCATGC | 1 cut(s) | 753 |
| PagI | TCATGA | 1 cut(s) | 313 |
| PciI | ACATGT | 1 cut(s) | 432 |
| PctI | GAATGC | 4 cut(s) | 518, 642, 741, 742 |
| PdmI | GAANNNNTTC | 3 cut(s) | 372, 969, 1087 |
| PfeI | GAWTC | 3 cut(s) | 525, 635, 1206 |
| PflFI | GACNNNGTC | 1 cut(s) | 621 |
| PkrI | GCNGC | 7 cut(s) | 112, 269, 481, 544, 730, 741, 1033 |
| PleI | GAGTC | 2 cut(s) | 155, 595 |
| PpsI | GAGTC | 2 cut(s) | 155, 595 |
| PpuMI | RGGWCCY | 1 cut(s) | 977 |
| PscI | ACATGT | 1 cut(s) | 432 |
| Psp124BI | GAGCTC | 1 cut(s) | 796 |
| Psp5II | RGGWCCY | 1 cut(s) | 977 |
| Psp6I | CCWGG | 1 cut(s) | 665 |
| PspFI | CCCAGC | 2 cut(s) | 386, 833 |
| PspGI | CCWGG | 1 cut(s) | 665 |
| PspN4I | GGNNCC | 5 cut(s) | 709, 769, 926, 978, 1075 |
| PspPI | GGNCC | 4 cut(s) | 463, 708, 815, 977 |
| PspPPI | RGGWCCY | 1 cut(s) | 977 |
| PstI | CTGCAG | 1 cut(s) | 1033 |
| PstNI | CAGNNNCTG | 1 cut(s) | 569 |
| PsuI | RGATCY | 1 cut(s) | 767 |
| PsyI | GACNNNGTC | 1 cut(s) | 621 |
| PvuII | CAGCTG | 1 cut(s) | 386 |
| RsaI | GTAC | 6 cut(s) | 431, 664, 899, 940, 1222, 1227 |
| RsaNI | GTAC | 6 cut(s) | 430, 663, 898, 939, 1221, 1226 |
| RseI | CAYNNNNRTG | 2 cut(s) | 402, 536 |
| SacI | GAGCTC | 1 cut(s) | 796 |
| SaqAI | TTAA | 4 cut(s) | 254, 593, 717, 878 |
| SatI | GCNGC | 7 cut(s) | 111, 268, 480, 543, 729, 740, 1032 |
| Sau3AI | GATC | 3 cut(s) | 105, 551, 767 |
| Sau96I | GGNCC | 4 cut(s) | 463, 708, 815, 977 |
| SchI | GAGTC | 2 cut(s) | 155, 596 |
| ScrFI | CCNGG | 1 cut(s) | 667 |
| SduI | GDGCHC | 3 cut(s) | 150, 561, 796 |
| SexAI | ACCWGGT | 1 cut(s) | 665 |
| SfcI | CTRYAG | 3 cut(s) | 942, 1029, 1092 |
| SinI | GGWCC | 3 cut(s) | 708, 815, 977 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 402, 536 |
| SmlI | CTYRAG | 1 cut(s) | 592 |
| SmoI | CTYRAG | 1 cut(s) | 592 |
| SphI | GCATGC | 1 cut(s) | 753 |
| Sse9I | AATT | 8 cut(s) | 31, 357, 369, 378, 425, 651, 1035, 1118 |
| SsiI | CCGC | 5 cut(s) | 113, 231, 259, 268, 479 |
| SspI | AATATT | 1 cut(s) | 1051 |
| SspMI | CTAG | 2 cut(s) | 647, 797 |
| SstI | GAGCTC | 1 cut(s) | 796 |
| StyD4I | CCNGG | 1 cut(s) | 665 |
| StyI | CCWWGG | 3 cut(s) | 711, 928, 1078 |
| TaaI | ACNGT | 2 cut(s) | 902, 1225 |
| TaqII | GACCGA | 1 cut(s) | 832 |
| TasI | AATT | 8 cut(s) | 31, 357, 369, 378, 425, 651, 1035, 1118 |
| TatI | WGTACW | 3 cut(s) | 429, 897, 1225 |
| TauI | GCSGC | 2 cut(s) | 270, 482 |
| TfiI | GAWTC | 3 cut(s) | 525, 635, 1206 |
| Tru1I | TTAA | 4 cut(s) | 254, 593, 717, 878 |
| Tru9I | TTAA | 4 cut(s) | 254, 593, 717, 878 |
| TscAI | CASTG | 5 cut(s) | 73, 79, 173, 570, 1222 |
| TseI | GCWGC | 5 cut(s) | 110, 542, 728, 739, 1031 |
| TspDTI | ATGAA | 6 cut(s) | 302, 548, 766, 774, 801, 930 |
| TspGWI | ACGGA | 2 cut(s) | 760, 1113 |
| TspRI | CASTG | 5 cut(s) | 73, 79, 173, 570, 1222 |
| Tth111I | GACNNNGTC | 1 cut(s) | 621 |
| Vha464I | CTTAAG | 1 cut(s) | 592 |
| VpaK11BI | GGWCC | 3 cut(s) | 708, 815, 977 |
| XapI | RAATTY | 3 cut(s) | 31, 378, 651 |
| XbaI | TCTAGA | 1 cut(s) | 796 |
| XceI | RCATGY | 4 cut(s) | 436, 753, 855, 873 |
| XmiI | GTMKAC | 1 cut(s) | 1095 |
| XmnI | GAANNNNTTC | 3 cut(s) | 372, 969, 1087 |
| XspI | CTAG | 2 cut(s) | 647, 797 |
| Zsp2I | ATGCAT | 1 cut(s) | 755 |