Nucleolar protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G56990 AT3G56990 AT3G56990 |
| fragaria_vesca | FvH4_2g11640 FvH4_2g11640 |
| malus_domestica | MD06G1011700.v1.1 |
| prunus_persica | Prupe.5G014500_v2.0.a1 Prupe.5G014500_v2.0.a1 Prupe.8G004300_v2.0.a1 |
| pyrus_communis | pycom06g00990 |
| rosa_chinensis | RchiOBHm_Chr6g0270881 |
| rosa_laevigata | RLG00000013762 |
| rosa_multiflora | Rmu_sc0000642.1_g000031 Rmu_sc0007274.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00197520 |
| rosa_rugosa | Rorug06G0056900 Rorug06G0057000 |
| rosa_samantha | Rh6AG176500 Rh6BG179900 Rh6CG175900 Rh6DG168200 |
| rosa_wichuraiana | Rw6G015040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 685 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 698 |
| Acc36I | ACCTGC | 5 cut(s) | 221, 685, 1069, 1636, 1852 |
| AccB1I | GGYRCC | 2 cut(s) | 673, 871 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 959 |
| AccBSI | CCGCTC | 1 cut(s) | 1768 |
| AccI | GTMKAC | 1 cut(s) | 29 |
| AciI | CCGC | 5 cut(s) | 520, 551, 1674, 1768, 2088 |
| AclWI | GGATC | 4 cut(s) | 151, 819, 911, 924 |
| AcoI | YGGCCR | 1 cut(s) | 1702 |
| AcsI | RAATTY | 5 cut(s) | 272, 417, 713, 1145, 1491 |
| AcuI | CTGAAG | 1 cut(s) | 1119 |
| AcvI | CACGTG | 1 cut(s) | 1910 |
| AcyI | GRCGYC | 1 cut(s) | 872 |
| AdeI | CACNNNGTG | 1 cut(s) | 1979 |
| AfaI | GTAC | 4 cut(s) | 56, 497, 768, 1946 |
| AfeI | AGCGCT | 1 cut(s) | 117 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 428, 926, 959, 995, 1055 |
| AflII | CTTAAG | 2 cut(s) | 23, 1654 |
| AflIII | ACRYGT | 1 cut(s) | 816 |
| AgsI | TTSAA | 8 cut(s) | 176, 290, 345, 1144, 1177, 1301, 1526, 2000 |
| AjnI | CCWGG | 5 cut(s) | 89, 693, 988, 1699, 1897 |
| Alw21I | GWGCWC | 2 cut(s) | 542, 1339 |
| Alw26I | GTCTC | 3 cut(s) | 1193, 1268, 1442 |
| Alw44I | GTGCAC | 1 cut(s) | 1335 |
| AlwI | GGATC | 4 cut(s) | 151, 819, 911, 924 |
| Aor51HI | AGCGCT | 1 cut(s) | 117 |
| AoxI | GGCC | 1 cut(s) | 1702 |
| ApaLI | GTGCAC | 1 cut(s) | 1335 |
| ApeKI | GCWGC | 4 cut(s) | 227, 476, 825, 1841 |
| ApoI | RAATTY | 5 cut(s) | 272, 417, 713, 1145, 1491 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 155, 187, 200, 232, 1493, 1525 |
| AseI | ATTAAT | 4 cut(s) | 504, 663, 969, 1001 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1818 |
| AspLEI | GCGC | 3 cut(s) | 118, 786, 874 |
| AspS9I | GGNCC | 3 cut(s) | 1058, 1197, 1895 |
| AsuHPI | GGTGA | 4 cut(s) | 347, 617, 695, 941 |
| AvaII | GGWCC | 3 cut(s) | 1058, 1197, 1895 |
| BaeGI | GKGCMC | 1 cut(s) | 1339 |
| BalI | TGGCCA | 1 cut(s) | 1704 |
| BamHI | GGATCC | 1 cut(s) | 916 |
| BanI | GGYRCC | 2 cut(s) | 673, 871 |
| BbrPI | CACGTG | 1 cut(s) | 1910 |
| BbsI | GAAGAC | 1 cut(s) | 1167 |
| Bbv12I | GWGCWC | 2 cut(s) | 542, 1339 |
| BbvCI | CCTCAGC | 1 cut(s) | 266 |
| BbvI | GCAGC | 4 cut(s) | 239, 463, 837, 1853 |
| BccI | CCATC | 7 cut(s) | 5, 44, 142, 605, 1042, 1136, 1609 |
| BciT130I | CCWGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| BcoDI | GTCTC | 3 cut(s) | 1193, 1268, 1442 |
| BfaI | CTAG | 5 cut(s) | 590, 1016, 1106, 1322, 1929 |
| BfmI | CTRYAG | 1 cut(s) | 1021 |
| BfoI | RGCGCY | 2 cut(s) | 119, 875 |
| BfrI | CTTAAG | 2 cut(s) | 23, 1654 |
| BfuAI | ACCTGC | 5 cut(s) | 221, 685, 1069, 1636, 1852 |
| BisI | GCNGC | 7 cut(s) | 228, 477, 552, 826, 1769, 1842, 2089 |
| BlsI | GCNGC | 7 cut(s) | 229, 478, 553, 827, 1770, 1843, 2090 |
| Bme1390I | CCNGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| Bme18I | GGWCC | 3 cut(s) | 1058, 1197, 1895 |
| BmgT120I | GGNCC | 3 cut(s) | 1058, 1197, 1895 |
| BmiI | GGNNCC | 6 cut(s) | 675, 873, 918, 1198, 1698, 1896 |
| BmrFI | CCNGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| BmsI | GCATC | 5 cut(s) | 859, 1402, 1423, 1657, 2116 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1023 |
| BpiI | GAAGAC | 1 cut(s) | 1167 |
| BpmI | CTGGAG | 1 cut(s) | 1920 |
| Bpu10I | CCTNAGC | 2 cut(s) | 266, 536 |
| BpuEI | CTTGAG | 4 cut(s) | 266, 655, 1187, 1481 |
| BsaAI | YACGTR | 1 cut(s) | 1910 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1644 |
| BsaHI | GRCGYC | 1 cut(s) | 872 |
| BsaI | GGTCTC | 1 cut(s) | 1193 |
| BsaJI | CCNNGG | 4 cut(s) | 648, 989, 1368, 1632 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 428, 926, 959, 995, 1055 |
| Bse1I | ACTGG | 2 cut(s) | 1076, 1189 |
| Bse3DI | GCAATG | 1 cut(s) | 60 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1644 |
| BseBI | CCWGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| BseDI | CCNNGG | 4 cut(s) | 648, 989, 1368, 1632 |
| BseGI | GGATG | 8 cut(s) | 153, 616, 793, 1044, 1618, 1645, 1768, 1969 |
| BseJI | GATNNNNATC | 1 cut(s) | 1644 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 428, 926, 959, 995, 1055 |
| BseMI | GCAATG | 1 cut(s) | 60 |
| BseMII | CTCAG | 5 cut(s) | 158, 257, 527, 858, 1861 |
| BseNI | ACTGG | 2 cut(s) | 1076, 1189 |
| BseRI | GAGGAG | 7 cut(s) | 1124, 1973, 2002, 2064, 2082, 2091, 2115 |
| BseSI | GKGCMC | 1 cut(s) | 1339 |
| BseXI | GCAGC | 4 cut(s) | 239, 463, 837, 1853 |
| BseYI | CCCAGC | 2 cut(s) | 69, 1891 |
| BsgI | GTGCAG | 2 cut(s) | 777, 1047 |
| BshFI | GGCC | 1 cut(s) | 1704 |
| BshNI | GGYRCC | 2 cut(s) | 673, 871 |
| BsiHKAI | GWGCWC | 2 cut(s) | 542, 1339 |
| BslFI | GGGAC | 3 cut(s) | 449, 1210, 1908 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 428, 926, 959, 995, 1055 |
| BsmAI | GTCTC | 3 cut(s) | 1193, 1268, 1442 |
| BsmFI | GGGAC | 3 cut(s) | 449, 1210, 1908 |
| BsmI | GAATGC | 1 cut(s) | 1781 |
| BsnI | GGCC | 1 cut(s) | 1704 |
| Bso31I | GGTCTC | 1 cut(s) | 1193 |
| Bsp1286I | GDGCHC | 2 cut(s) | 542, 1339 |
| Bsp1407I | TGTACA | 2 cut(s) | 54, 495 |
| Bsp143I | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| Bsp19I | CCATGG | 1 cut(s) | 1632 |
| BspACI | CCGC | 5 cut(s) | 520, 551, 1674, 1768, 2088 |
| BspANI | GGCC | 1 cut(s) | 1704 |
| BspCNI | CTCAG | 5 cut(s) | 159, 258, 528, 859, 1860 |
| BspLI | GGNNCC | 6 cut(s) | 675, 873, 918, 1198, 1698, 1896 |
| BspMAI | CTGCAG | 1 cut(s) | 1025 |
| BspMI | ACCTGC | 5 cut(s) | 221, 685, 1069, 1636, 1852 |
| BspPI | GGATC | 4 cut(s) | 151, 819, 911, 924 |
| BspQI | GCTCTTC | 1 cut(s) | 1095 |
| BspT107I | GGYRCC | 2 cut(s) | 673, 871 |
| BspTI | CTTAAG | 2 cut(s) | 23, 1654 |
| BspTNI | GGTCTC | 1 cut(s) | 1193 |
| BsrBI | CCGCTC | 1 cut(s) | 1768 |
| BsrDI | GCAATG | 1 cut(s) | 60 |
| BsrGI | TGTACA | 2 cut(s) | 54, 495 |
| BsrI | ACTGG | 2 cut(s) | 1076, 1189 |
| BssECI | CCNNGG | 4 cut(s) | 648, 989, 1368, 1632 |
| BssMI | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| BssNI | GRCGYC | 1 cut(s) | 872 |
| BssT1I | CCWWGG | 2 cut(s) | 1368, 1632 |
| Bst2UI | CCWGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| Bst4CI | ACNGT | 2 cut(s) | 410, 587 |
| Bst6I | CTCTTC | 3 cut(s) | 487, 535, 1095 |
| BstACI | GRCGYC | 1 cut(s) | 872 |
| BstAFI | CTTAAG | 2 cut(s) | 23, 1654 |
| BstAUI | TGTACA | 2 cut(s) | 54, 495 |
| BstBAI | YACGTR | 1 cut(s) | 1910 |
| BstC8I | GCNNGC | 4 cut(s) | 351, 578, 1011, 1773 |
| BstDSI | CCRYGG | 1 cut(s) | 1632 |
| BstF5I | GGATG | 8 cut(s) | 153, 616, 793, 1044, 1618, 1645, 1768, 1969 |
| BstH2I | RGCGCY | 2 cut(s) | 119, 875 |
| BstHHI | GCGC | 3 cut(s) | 118, 786, 874 |
| BstKTI | GATC | 8 cut(s) | 130, 159, 370, 814, 919, 1054, 1648, 1858 |
| BstMAI | GTCTC | 3 cut(s) | 1193, 1268, 1442 |
| BstMBI | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 115, 942 |
| BstNI | CCWGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| BstNSI | RCATGY | 4 cut(s) | 389, 820, 1222, 1775 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1023 |
| BstSCI | CCNGG | 5 cut(s) | 89, 693, 988, 1699, 1897 |
| BstSFI | CTRYAG | 1 cut(s) | 1021 |
| BstSLI | GKGCMC | 1 cut(s) | 1339 |
| BstV1I | GCAGC | 4 cut(s) | 239, 463, 837, 1853 |
| BstV2I | GAAGAC | 1 cut(s) | 1167 |
| BstX2I | RGATCY | 1 cut(s) | 916 |
| BstYI | RGATCY | 1 cut(s) | 916 |
| BsuRI | GGCC | 1 cut(s) | 1704 |
| BtgI | CCRYGG | 1 cut(s) | 1632 |
| BtsCI | GGATG | 8 cut(s) | 153, 616, 793, 1044, 1618, 1645, 1768, 1969 |
| BtsI | GCAGTG | 2 cut(s) | 702, 760 |
| BtsIMutI | CAGTG | 4 cut(s) | 415, 702, 760, 888 |
| BveI | ACCTGC | 5 cut(s) | 221, 685, 1069, 1636, 1852 |
| Cac8I | GCNNGC | 4 cut(s) | 351, 578, 1011, 1773 |
| CfoI | GCGC | 3 cut(s) | 118, 786, 874 |
| Cfr13I | GGNCC | 3 cut(s) | 1058, 1197, 1895 |
| CseI | GACGC | 1 cut(s) | 98 |
| Csp6I | GTAC | 4 cut(s) | 55, 496, 767, 1945 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 76, 111 |
| CviAII | CATG | 8 cut(s) | 386, 817, 937, 1219, 1223, 1633, 1706, 1772 |
| CviQI | GTAC | 4 cut(s) | 55, 496, 767, 1945 |
| DinI | GGCGCC | 1 cut(s) | 873 |
| DpnI | GATC | 8 cut(s) | 129, 158, 369, 813, 918, 1053, 1647, 1857 |
| DpnII | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| DraIII | CACNNNGTG | 1 cut(s) | 1979 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 698 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 698 |
| EaeI | YGGCCR | 1 cut(s) | 1702 |
| Eam1104I | CTCTTC | 3 cut(s) | 487, 535, 1095 |
| EarI | CTCTTC | 3 cut(s) | 487, 535, 1095 |
| Eco130I | CCWWGG | 2 cut(s) | 1368, 1632 |
| Eco31I | GGTCTC | 1 cut(s) | 1193 |
| Eco47I | GGWCC | 3 cut(s) | 1058, 1197, 1895 |
| Eco47III | AGCGCT | 1 cut(s) | 117 |
| Eco57I | CTGAAG | 1 cut(s) | 1119 |
| Eco72I | CACGTG | 1 cut(s) | 1910 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1895 |
| EcoRI | GAATTC | 1 cut(s) | 417 |
| EcoRII | CCWGG | 5 cut(s) | 89, 693, 988, 1699, 1897 |
| EcoT14I | CCWWGG | 2 cut(s) | 1368, 1632 |
| EcoT22I | ATGCAT | 1 cut(s) | 1224 |
| EgeI | GGCGCC | 1 cut(s) | 873 |
| EheI | GGCGCC | 1 cut(s) | 873 |
| ErhI | CCWWGG | 2 cut(s) | 1368, 1632 |
| FaeI | CATG | 8 cut(s) | 389, 820, 940, 1222, 1226, 1636, 1709, 1775 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1149, 1181 |
| FaqI | GGGAC | 3 cut(s) | 449, 1210, 1908 |
| FatI | CATG | 8 cut(s) | 385, 816, 936, 1218, 1222, 1632, 1705, 1771 |
| FblI | GTMKAC | 1 cut(s) | 29 |
| Fnu4HI | GCNGC | 7 cut(s) | 228, 477, 552, 826, 1769, 1842, 2089 |
| FokI | GGATG | 8 cut(s) | 160, 623, 780, 1031, 1625, 1652, 1775, 1976 |
| Fsp4HI | GCNGC | 7 cut(s) | 228, 477, 552, 826, 1769, 1842, 2089 |
| FspBI | CTAG | 5 cut(s) | 590, 1016, 1106, 1322, 1929 |
| GlaI | GCGC | 3 cut(s) | 117, 785, 873 |
| GluI | GCNGC | 7 cut(s) | 228, 477, 552, 826, 1769, 1842, 2089 |
| GsaI | CCCAGC | 2 cut(s) | 73, 1895 |
| GsuI | CTGGAG | 1 cut(s) | 1920 |
| HaeII | RGCGCY | 2 cut(s) | 119, 875 |
| HaeIII | GGCC | 1 cut(s) | 1704 |
| HgaI | GACGC | 1 cut(s) | 98 |
| HhaI | GCGC | 3 cut(s) | 118, 786, 874 |
| Hin1I | GRCGYC | 1 cut(s) | 872 |
| Hin1II | CATG | 8 cut(s) | 389, 820, 940, 1222, 1226, 1636, 1709, 1775 |
| Hin6I | GCGC | 3 cut(s) | 116, 784, 872 |
| HinP1I | GCGC | 3 cut(s) | 116, 784, 872 |
| HincII | GTYRAC | 2 cut(s) | 30, 1182 |
| HindII | GTYRAC | 2 cut(s) | 30, 1182 |
| HindIII | AAGCTT | 4 cut(s) | 347, 578, 1091, 1263 |
| HinfI | GANTC | 7 cut(s) | 302, 1030, 1381, 1509, 1661, 1796, 2031 |
| HphI | GGTGA | 4 cut(s) | 347, 617, 695, 941 |
| Hpy166II | GTNNAC | 5 cut(s) | 30, 1118, 1182, 1337, 1907 |
| Hpy188III | TCNNGA | 7 cut(s) | 49, 206, 509, 920, 1016, 1400, 1793 |
| Hpy8I | GTNNAC | 5 cut(s) | 30, 1118, 1182, 1337, 1907 |
| Hpy99I | CGWCG | 1 cut(s) | 114 |
| HpyAV | CCTTC | 5 cut(s) | 426, 757, 926, 1468, 1596 |
| HpyCH4III | ACNGT | 2 cut(s) | 410, 587 |
| HpyCH4IV | ACGT | 3 cut(s) | 1306, 1333, 1909 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 115, 942 |
| HpySE526I | ACGT | 3 cut(s) | 1306, 1333, 1909 |
| Hsp92I | GRCGYC | 1 cut(s) | 872 |
| Hsp92II | CATG | 8 cut(s) | 389, 820, 940, 1222, 1226, 1636, 1709, 1775 |
| HspAI | GCGC | 3 cut(s) | 116, 784, 872 |
| KasI | GGCGCC | 1 cut(s) | 871 |
| Kzo9I | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| LguI | GCTCTTC | 1 cut(s) | 1095 |
| LmnI | GCTCC | 1 cut(s) | 573 |
| Lsp1109I | GCAGC | 4 cut(s) | 239, 463, 837, 1853 |
| LweI | GCATC | 5 cut(s) | 859, 1402, 1423, 1657, 2116 |
| MaeI | CTAG | 5 cut(s) | 590, 1016, 1106, 1322, 1929 |
| MaeII | ACGT | 3 cut(s) | 1306, 1333, 1909 |
| MaeIII | GTNAC | 3 cut(s) | 461, 683, 700 |
| MalI | GATC | 8 cut(s) | 129, 158, 369, 813, 918, 1053, 1647, 1857 |
| MbiI | CCGCTC | 1 cut(s) | 1768 |
| MboI | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| MboII | GAAGA | 7 cut(s) | 474, 522, 1112, 1172, 1421, 1655, 1979 |
| MflI | RGATCY | 1 cut(s) | 916 |
| MhlI | GDGCHC | 2 cut(s) | 542, 1339 |
| MlsI | TGGCCA | 1 cut(s) | 1704 |
| MluNI | TGGCCA | 1 cut(s) | 1704 |
| Mly113I | GGCGCC | 1 cut(s) | 872 |
| MlyI | GAGTC | 2 cut(s) | 1375, 1805 |
| MmeI | TCCRAC | 1 cut(s) | 727 |
| Mox20I | TGGCCA | 1 cut(s) | 1704 |
| Mph1103I | ATGCAT | 1 cut(s) | 1224 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1818 |
| MscI | TGGCCA | 1 cut(s) | 1704 |
| MslI | CAYNNNNRTG | 3 cut(s) | 358, 408, 819 |
| Msp20I | TGGCCA | 1 cut(s) | 1704 |
| MspA1I | CMGCKG | 2 cut(s) | 551, 959 |
| MspCI | CTTAAG | 2 cut(s) | 23, 1654 |
| MspR9I | CCNGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| Mva1269I | GAATGC | 1 cut(s) | 1781 |
| MvaI | CCWGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 115, 942 |
| NarI | GGCGCC | 1 cut(s) | 872 |
| NcoI | CCATGG | 1 cut(s) | 1632 |
| NdeII | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| NlaIII | CATG | 8 cut(s) | 389, 820, 940, 1222, 1226, 1636, 1709, 1775 |
| NlaIV | GGNNCC | 6 cut(s) | 675, 873, 918, 1198, 1698, 1896 |
| NmuCI | GTSAC | 3 cut(s) | 461, 683, 700 |
| NsiI | ATGCAT | 1 cut(s) | 1224 |
| NspI | RCATGY | 4 cut(s) | 389, 820, 1222, 1775 |
| PaeI | GCATGC | 1 cut(s) | 1775 |
| PaqCI | CACCTGC | 1 cut(s) | 685 |
| PciI | ACATGT | 1 cut(s) | 816 |
| PciSI | GCTCTTC | 1 cut(s) | 1095 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 216, 1339 |
| PctI | GAATGC | 1 cut(s) | 1781 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1818 |
| PfeI | GAWTC | 5 cut(s) | 302, 1030, 1509, 1661, 2031 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 959 |
| PkrI | GCNGC | 7 cut(s) | 229, 478, 553, 827, 1770, 1843, 2090 |
| PleI | GAGTC | 2 cut(s) | 1375, 1804 |
| PluTI | GGCGCC | 1 cut(s) | 875 |
| PmaCI | CACGTG | 1 cut(s) | 1910 |
| PmlI | CACGTG | 1 cut(s) | 1910 |
| PpsI | GAGTC | 2 cut(s) | 1375, 1804 |
| Ppu21I | YACGTR | 1 cut(s) | 1910 |
| PpuMI | RGGWCCY | 1 cut(s) | 1895 |
| PscI | ACATGT | 1 cut(s) | 816 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1023 |
| PshBI | ATTAAT | 4 cut(s) | 504, 663, 969, 1001 |
| Psp5II | RGGWCCY | 1 cut(s) | 1895 |
| Psp6I | CCWGG | 5 cut(s) | 89, 693, 988, 1699, 1897 |
| PspCI | CACGTG | 1 cut(s) | 1910 |
| PspFI | CCCAGC | 2 cut(s) | 69, 1891 |
| PspGI | CCWGG | 5 cut(s) | 89, 693, 988, 1699, 1897 |
| PspN4I | GGNNCC | 6 cut(s) | 675, 873, 918, 1198, 1698, 1896 |
| PspPI | GGNCC | 3 cut(s) | 1058, 1197, 1895 |
| PspPPI | RGGWCCY | 1 cut(s) | 1895 |
| PstI | CTGCAG | 1 cut(s) | 1025 |
| PsuI | RGATCY | 1 cut(s) | 916 |
| PvuII | CAGCTG | 1 cut(s) | 959 |
| RsaI | GTAC | 4 cut(s) | 56, 497, 768, 1946 |
| RsaNI | GTAC | 4 cut(s) | 55, 496, 767, 1945 |
| RseI | CAYNNNNRTG | 3 cut(s) | 358, 408, 819 |
| SalI | GTCGAC | 1 cut(s) | 28 |
| SapI | GCTCTTC | 1 cut(s) | 1095 |
| SatI | GCNGC | 7 cut(s) | 228, 477, 552, 826, 1769, 1842, 2089 |
| Sau3AI | GATC | 8 cut(s) | 127, 156, 367, 811, 916, 1051, 1645, 1855 |
| Sau96I | GGNCC | 3 cut(s) | 1058, 1197, 1895 |
| SchI | GAGTC | 2 cut(s) | 1375, 1805 |
| ScrFI | CCNGG | 5 cut(s) | 91, 695, 990, 1701, 1899 |
| SduI | GDGCHC | 2 cut(s) | 542, 1339 |
| SfaNI | GCATC | 5 cut(s) | 859, 1402, 1423, 1657, 2116 |
| SfcI | CTRYAG | 1 cut(s) | 1021 |
| SfoI | GGCGCC | 1 cut(s) | 873 |
| SinI | GGWCC | 3 cut(s) | 1058, 1197, 1895 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 358, 408, 819 |
| SmlI | CTYRAG | 6 cut(s) | 23, 281, 634, 1166, 1496, 1654 |
| SmoI | CTYRAG | 6 cut(s) | 23, 281, 634, 1166, 1496, 1654 |
| SphI | GCATGC | 1 cut(s) | 1775 |
| SsiI | CCGC | 5 cut(s) | 520, 551, 1674, 1768, 2088 |
| SspDI | GGCGCC | 1 cut(s) | 871 |
| SspMI | CTAG | 5 cut(s) | 590, 1016, 1106, 1322, 1929 |
| StyD4I | CCNGG | 5 cut(s) | 89, 693, 988, 1699, 1897 |
| StyI | CCWWGG | 2 cut(s) | 1368, 1632 |
| TaaI | ACNGT | 2 cut(s) | 410, 587 |
| TaiI | ACGT | 3 cut(s) | 1309, 1336, 1912 |
| TaqI | TCGA | 3 cut(s) | 29, 112, 2041 |
| TatI | WGTACW | 3 cut(s) | 54, 495, 1944 |
| TauI | GCSGC | 3 cut(s) | 554, 1771, 2091 |
| TfiI | GAWTC | 5 cut(s) | 302, 1030, 1509, 1661, 2031 |
| TscAI | CASTG | 4 cut(s) | 415, 709, 760, 895 |
| TseFI | GTSAC | 3 cut(s) | 461, 683, 700 |
| TseI | GCWGC | 4 cut(s) | 227, 476, 825, 1841 |
| Tsp45I | GTSAC | 3 cut(s) | 461, 683, 700 |
| TspDTI | ATGAA | 9 cut(s) | 735, 1033, 1422, 1437, 1629, 1656, 1722, 1767, 1980 |
| TspGWI | ACGGA | 1 cut(s) | 364 |
| TspRI | CASTG | 4 cut(s) | 415, 709, 760, 895 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 959 |
| Vha464I | CTTAAG | 2 cut(s) | 23, 1654 |
| VneI | GTGCAC | 1 cut(s) | 1335 |
| VpaK11BI | GGWCC | 3 cut(s) | 1058, 1197, 1895 |
| VspI | ATTAAT | 4 cut(s) | 504, 663, 969, 1001 |
| XapI | RAATTY | 5 cut(s) | 272, 417, 713, 1145, 1491 |
| XbaI | TCTAGA | 1 cut(s) | 1015 |
| XceI | RCATGY | 4 cut(s) | 389, 820, 1222, 1775 |
| XmiI | GTMKAC | 1 cut(s) | 29 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1818 |
| XspI | CTAG | 5 cut(s) | 590, 1016, 1106, 1322, 1929 |
| Zsp2I | ATGCAT | 1 cut(s) | 1224 |