Rroxscaffold_7G00197520

Nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0009508
Physical Location & Seq
Reverse (-)
41863408 .. 41870023
6616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00197520.1

Sequence Viewer

Length: 2001 bp
ATGGCTTACCATGGAGGCAATCTCAAGTCGACCTCCATCAATGGCGTCAAGATGTACACCGTTGCTTCTCAGGAACCCTCTCTCGCCACCTGGCTTGACCCCAACAAGCGTCGAGCCCTCCGCAAAGACAAAAATTATATGCAAAGAGTGGACTTGATTCAGGACCTCCGCTTCGAAACTGCCACCACCAAAATCAAGGCCACTCCTGACGGCGAGTTCCTCATTGCATCAGGTATATACCCACCCCAAGTCAAGGTTTATGAGCTCAGGGAACTTTCCCTCAAGTTTGAAAGGCACTTGGATTCTGAGATTATTGATTTTGAGGTTTTGGCTGATGATTATTCAAAGCTTGCGTTTTTATGTGCCGATCGTTCTGTTTATCTACATGCAAAATATGGAAAACATTACAGTTTGCGCATTCCAAGAATGGGTAGGGATATGGCTTATGATTGCTGGTCATGTGATTTGCTTTGTGCTGCCTCTTCTCCAGAACTTTACAGAATTAATTTGGAACAGGGGGCGTTTTTATCTTCCCTCAACACACAGTCGCCAGCACTAAATGTAGTTTCTCGAAGCAAGCTTCATGGTTTAGTTGCTTGTGGTGGTGAAGATGGTGCTGTGGAATGTTTTGACTTGAGAATGAAATCTTCAGTTGGTAGGATTAATGCTGTTGGACCTGCTGGTGACATCGACCAGGAGGTCACAGCAGTAGAGTTTGATGAAAAAACGGGTTTCTTAATGGCTGTTGGAAGCAGTGCAGGGAAGGTTCTCGTCTATGACTTGCGTTCATCACATCCTATACAGGTGAAGGATCACATGTATGGCAGTCCGATATTAGACATTAAGTGGCATCAAACTCTTAATTCTGAACGGCCAAAGTTAATTACCACTGACAATCACGTTGTTAGAATATGGGACCCTGACACAGGAGAAGGAATGACAAGCATTGAGCCCACAGCTGGAGCAATAAATGATATATGTACATTCCCTGGCAGTGGATTGATGCTGTTGGCTCTGGACTGCAGTCAGATACCATCGTATTTCATACCTGAACTCGGACCTGCTCCAAATTGGTGTTCTTACCTGCAAAATCTTACTGAAGAGCTAGAGGAGGGTGCGCAGACGACTATCTATGATGATTATAAATTTTTGACAAAAGAAGACCTTGAGAGGTTGAGGTTGACTAAACTGATTGGAACGAATCTACTCAGAGCTTACATGCATGGGTTCTTTGTTCGTTATTCGTTGTATAAACAGGCAAAAGCTTTGGTAGAGCCTTTTGATATTAGTGAATACATTGAACAGCAGAAAAAGGAGAAGCTAGAAAAAGAATTTGCTGGACAGCGAATTACGAAAAAGAGAAAATTGCCCAAGGTCAACCAAAAGTTTGCAGAGAGGTTTTTGGAGTATGAAGAAGCAGAAAATGAAACTAAAGATATTGATGAAAATGAGACCAACAAGCCATCCAAGAAAAAGAAGGCACTTGATATTAATATTCTTAAAGATGAGCGATTTAAAGCAATGTTTGAAAATAAGGACTTTGAAATTGATGAGTACTCGCACGAATATAAGGCTTTACACCCGGTTTCTTCTAACAAGCGAGCATCTCTGGTGGAAGAACACTTCAGACCTGCCATGGAAGATGAAGATGAGAATCATAGTGATTCTGATGCAACATCAGAGGATGAGCCTGAATATGGAAACAGCAGAATAAAAGGGAAAGGACGAACTCCAAGATTGATTGAAGCCAAGGATGAGCGGCATGCAGAGGCATTCAGGAGTGGTGCATCACTTGCACATGAGGAGCTGCTGCCATTGGGAGAAAGGGTAAAAGCCCTCAGAGATGATCGGCGGGTTTCTGCCCTCCCAAGTGGTGTTAAGCTGGGCCCTGGAGGGTCACGTGAGATTTCTTTCAGAGCTAGAGGCTCCTCAAAGTATAAAGAGGATGATGATGAAGAAGCAGAGCGTGGAAAGAGAAGGGAGTTCATTCATTGGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC153

Protein Analysis

666

Amino Acids

75.67

Weight (kDa)

5.68

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_NOL10_N PF23098 14 - 376 6.6e-58 Nucleolar protein 10-like, N-terminal domain
WD40_CDC20-Fz PF24807 152 - 309 1.8e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_1st PF25171 161 - 297 6.6e-09 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st PF25173 163 - 331 1.2e-07 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 196 - 268 2.6e-06 Prp19 WD40 domain
NOL10_2nd PF23097 377 - 424 1.2e-21 Nucleolar protein 10-like, second domain
NUC153 PF08159 502 - 529 1.2e-12 NUC153 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1143
AasI GACNNNNNNGTC 1 cut(s) 698
Acc16I TGCGCA 2 cut(s) 416, 1119
Acc36I ACCTGC 4 cut(s) 685, 1069, 1092, 1639
AccBSI CCGCTC 1 cut(s) 1759
AccI GTMKAC 1 cut(s) 29
AciI CCGC 4 cut(s) 121, 169, 1759, 1852
AclWI GGATC 1 cut(s) 819
AcoI YGGCCR 1 cut(s) 872
AcsI RAATTY 2 cut(s) 1145, 1331
AcuI CTGAAG 3 cut(s) 633, 1119, 1609
AcvI CACGTG 1 cut(s) 1901
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 3 cut(s) 56, 982, 1556
AfiI CCNNNNNNNGG 7 cut(s) 253, 428, 926, 959, 995, 1055, 1697
AflIII ACRYGT 1 cut(s) 816
AgsI TTSAA 6 cut(s) 290, 345, 1301, 1529, 1544, 1745
AjnI CCWGG 4 cut(s) 89, 693, 988, 1888
AjuI GAANNNNNNNTTGG 2 cut(s) 1060, 1092
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 1 cut(s) 1445
AlwI GGATC 1 cut(s) 819
AoxI GGCC 3 cut(s) 198, 872, 1885
ApaI GGGCCC 1 cut(s) 1889
ApeKI GCWGC 3 cut(s) 476, 1807, 1810
ApoI RAATTY 2 cut(s) 1145, 1331
ArsI GACNNNNNNTTYG 2 cut(s) 155, 187
AseI ATTAAT 3 cut(s) 504, 663, 1491
AspLEI GCGC 2 cut(s) 417, 1120
AspS9I GGNCC 6 cut(s) 163, 674, 916, 1058, 1885, 1886
AsuC2I CCSGG 1 cut(s) 1583
AsuHPI GGTGA 3 cut(s) 617, 695, 817
AsuII TTCGAA 1 cut(s) 174
AvaII GGWCC 4 cut(s) 163, 674, 916, 1058
BaeGI GKGCMC 1 cut(s) 1889
BaeI ACNNNNGTAYC 2 cut(s) 1022, 1055
BanII GRGCYC 4 cut(s) 118, 267, 954, 1889
BbrPI CACGTG 1 cut(s) 1901
BbsI GAAGAC 1 cut(s) 1167
Bbv12I GWGCWC 1 cut(s) 267
BbvI GCAGC 3 cut(s) 463, 1794, 1797
BccI CCATC 4 cut(s) 44, 605, 1042, 1471
BceAI ACGGC 2 cut(s) 226, 887
BciT130I CCWGG 4 cut(s) 91, 695, 990, 1890
BcnI CCSGG 1 cut(s) 1583
BcoDI GTCTC 1 cut(s) 1445
BfaI CTAG 3 cut(s) 1106, 1322, 1920
BfmI CTRYAG 1 cut(s) 1021
BfuAI ACCTGC 4 cut(s) 685, 1069, 1092, 1639
BisI GCNGC 4 cut(s) 477, 1760, 1808, 1811
BlsI GCNGC 4 cut(s) 478, 1761, 1809, 1812
BmcAI AGTACT 1 cut(s) 1556
Bme1390I CCNGG 5 cut(s) 91, 695, 990, 1583, 1890
Bme18I GGWCC 4 cut(s) 163, 674, 916, 1058
BmgT120I GGNCC 6 cut(s) 163, 674, 916, 1058, 1885, 1886
BmiI GGNNCC 5 cut(s) 75, 917, 918, 1887, 1927
BmrFI CCNGG 5 cut(s) 91, 695, 990, 1583, 1890
BmsI GCATC 6 cut(s) 236, 859, 993, 1613, 1660, 1796
BoxI GACNNNNGTC 1 cut(s) 1023
BpiI GAAGAC 1 cut(s) 1167
BplI GAGNNNNNCTC 1 cut(s) 38
BpmI CTGGAG 3 cut(s) 471, 981, 1911
Bpu10I CCTNAGC 1 cut(s) 266
Bpu14I TTCGAA 1 cut(s) 174
BpuEI CTTGAG 4 cut(s) 8, 266, 655, 1187
BpuMI CCSGG 1 cut(s) 1583
BsaAI YACGTR 1 cut(s) 1901
BsaBI GATNNNNATC 1 cut(s) 1653
BsaHI GRCGYC 1 cut(s) 45
BsaI GGTCTC 1 cut(s) 1445
BsaJI CCNNGG 6 cut(s) 10, 988, 1371, 1635, 1749, 1888
BsaXI ACNNNNNCTCC 2 cut(s) 1812, 1842
Bsc4I CCNNNNNNNGG 7 cut(s) 253, 428, 926, 959, 995, 1055, 1697
Bse3DI GCAATG 2 cut(s) 222, 1527
Bse8I GATNNNNATC 1 cut(s) 1653
BseBI CCWGG 4 cut(s) 91, 695, 990, 1890
BseDI CCNNGG 6 cut(s) 10, 988, 1371, 1635, 1749, 1888
BseGI GGATG 5 cut(s) 793, 1463, 1690, 1759, 1951
BseJI GATNNNNATC 1 cut(s) 1653
BseLI CCNNNNNNNGG 7 cut(s) 253, 428, 926, 959, 995, 1055, 1697
BseMI GCAATG 2 cut(s) 222, 1527
BseMII CTCAG 5 cut(s) 83, 280, 297, 1222, 1852
BseRI GAGGAG 3 cut(s) 1124, 1817, 1918
BseSI GKGCMC 1 cut(s) 1889
BseXI GCAGC 3 cut(s) 463, 1794, 1797
BseYI CCCAGC 1 cut(s) 1882
BsgI GTGCAG 1 cut(s) 777
Bsh1285I CGRYCG 1 cut(s) 370
BshFI GGCC 3 cut(s) 200, 874, 1887
BsiEI CGRYCG 1 cut(s) 370
BsiHKAI GWGCWC 1 cut(s) 267
BsiSI CCGG 1 cut(s) 1583
BslFI GGGAC 1 cut(s) 929
BslI CCNNNNNNNGG 7 cut(s) 253, 428, 926, 959, 995, 1055, 1697
BsmAI GTCTC 1 cut(s) 1445
BsmFI GGGAC 1 cut(s) 929
BsmI GAATGC 2 cut(s) 417, 1772
BsnI GGCC 3 cut(s) 200, 874, 1887
Bso31I GGTCTC 1 cut(s) 1445
Bsp119I TTCGAA 1 cut(s) 174
Bsp120I GGGCCC 1 cut(s) 1885
Bsp1286I GDGCHC 4 cut(s) 118, 267, 954, 1889
Bsp1407I TGTACA 2 cut(s) 54, 980
Bsp143I GATC 3 cut(s) 367, 811, 1846
Bsp19I CCATGG 2 cut(s) 10, 1635
BspACI CCGC 4 cut(s) 121, 169, 1759, 1852
BspANI GGCC 3 cut(s) 200, 874, 1887
BspCNI CTCAG 5 cut(s) 82, 279, 298, 1221, 1851
BspLI GGNNCC 5 cut(s) 75, 917, 918, 1887, 1927
BspMAI CTGCAG 1 cut(s) 1025
BspMI ACCTGC 4 cut(s) 685, 1069, 1092, 1639
BspPI GGATC 1 cut(s) 819
BspQI GCTCTTC 1 cut(s) 1095
BspT104I TTCGAA 1 cut(s) 174
BspTNI GGTCTC 1 cut(s) 1445
BsrBI CCGCTC 1 cut(s) 1759
BsrDI GCAATG 2 cut(s) 222, 1527
BsrGI TGTACA 2 cut(s) 54, 980
BssECI CCNNGG 6 cut(s) 10, 988, 1371, 1635, 1749, 1888
BssMI GATC 3 cut(s) 367, 811, 1846
BssNI GRCGYC 1 cut(s) 45
BssT1I CCWWGG 4 cut(s) 10, 1371, 1635, 1749
Bst2UI CCWGG 4 cut(s) 91, 695, 990, 1890
Bst4CI ACNGT 3 cut(s) 61, 410, 546
Bst6I CTCTTC 2 cut(s) 487, 1095
BstACI GRCGYC 1 cut(s) 45
BstAPI GCANNNNNTGC 1 cut(s) 1793
BstAUI TGTACA 2 cut(s) 54, 980
BstBAI YACGTR 1 cut(s) 1901
BstBI TTCGAA 1 cut(s) 174
BstC8I GCNNGC 5 cut(s) 351, 552, 578, 1602, 1764
BstDEI CTNAG 5 cut(s) 69, 266, 306, 1208, 1838
BstDSI CCRYGG 2 cut(s) 10, 1635
BstENI CCTNNNNNAGG 1 cut(s) 924
BstF5I GGATG 5 cut(s) 793, 1463, 1690, 1759, 1951
BstHHI GCGC 2 cut(s) 417, 1120
BstKTI GATC 3 cut(s) 370, 814, 1849
BstMAI GTCTC 1 cut(s) 1445
BstMBI GATC 3 cut(s) 367, 811, 1846
BstMCI CGRYCG 1 cut(s) 370
BstMWI GCNNNNNNNGC 1 cut(s) 1793
BstNI CCWGG 4 cut(s) 91, 695, 990, 1890
BstNSI RCATGY 4 cut(s) 389, 820, 1222, 1766
BstPAI GACNNNNGTC 1 cut(s) 1023
BstSCI CCNGG 5 cut(s) 89, 693, 988, 1581, 1888
BstSFI CTRYAG 1 cut(s) 1021
BstSLI GKGCMC 1 cut(s) 1889
BstV1I GCAGC 3 cut(s) 463, 1794, 1797
BstV2I GAAGAC 1 cut(s) 1167
BsuRI GGCC 3 cut(s) 200, 874, 1887
BtgI CCRYGG 2 cut(s) 10, 1635
BtsCI GGATG 5 cut(s) 793, 1463, 1690, 1759, 1951
BtsI GCAGTG 2 cut(s) 760, 1000
BtsIMutI CAGTG 3 cut(s) 760, 888, 1000
BveI ACCTGC 4 cut(s) 685, 1069, 1092, 1639
Cac8I GCNNGC 5 cut(s) 351, 552, 578, 1602, 1764
CfoI GCGC 2 cut(s) 417, 1120
Cfr13I GGNCC 6 cut(s) 163, 674, 916, 1058, 1885, 1886
CseI GACGC 2 cut(s) 34, 98
Csp6I GTAC 3 cut(s) 55, 981, 1555
CspCI CAANNNNNGTGG 2 cut(s) 76, 111
CviQI GTAC 3 cut(s) 55, 981, 1555
DdeI CTNAG 5 cut(s) 69, 266, 306, 1208, 1838
DpnI GATC 3 cut(s) 369, 813, 1848
DpnII GATC 3 cut(s) 367, 811, 1846
DraI TTTAAA 1 cut(s) 1516
DrdI GACNNNNNNGTC 1 cut(s) 698
DseDI GACNNNNNNGTC 1 cut(s) 698
EaeI YGGCCR 1 cut(s) 872
Eam1104I CTCTTC 2 cut(s) 487, 1095
EarI CTCTTC 2 cut(s) 487, 1095
Ecl136II GAGCTC 1 cut(s) 265
Eco130I CCWWGG 4 cut(s) 10, 1371, 1635, 1749
Eco24I GRGCYC 4 cut(s) 118, 267, 954, 1889
Eco31I GGTCTC 1 cut(s) 1445
Eco47I GGWCC 4 cut(s) 163, 674, 916, 1058
Eco53kI GAGCTC 1 cut(s) 265
Eco57I CTGAAG 3 cut(s) 633, 1119, 1609
Eco72I CACGTG 1 cut(s) 1901
EcoICRI GAGCTC 1 cut(s) 265
EcoNI CCTNNNNNAGG 1 cut(s) 924
EcoO109I RGGNCCY 3 cut(s) 163, 916, 1886
EcoRII CCWGG 4 cut(s) 89, 693, 988, 1888
EcoT14I CCWWGG 4 cut(s) 10, 1371, 1635, 1749
EcoT22I ATGCAT 1 cut(s) 1224
EcoT38I GRGCYC 4 cut(s) 118, 267, 954, 1889
ErhI CCWWGG 4 cut(s) 10, 1371, 1635, 1749
FalI AAGNNNNNCTT 2 cut(s) 1149, 1181
FaqI GGGAC 1 cut(s) 929
FauI CCCGC 1 cut(s) 1845
FblI GTMKAC 1 cut(s) 29
Fnu4HI GCNGC 4 cut(s) 477, 1760, 1808, 1811
FokI GGATG 5 cut(s) 780, 1450, 1697, 1766, 1958
FriOI GRGCYC 4 cut(s) 118, 267, 954, 1889
Fsp4HI GCNGC 4 cut(s) 477, 1760, 1808, 1811
FspBI CTAG 3 cut(s) 1106, 1322, 1920
FspI TGCGCA 2 cut(s) 416, 1119
GlaI GCGC 2 cut(s) 416, 1119
GluI GCNGC 4 cut(s) 477, 1760, 1808, 1811
GsaI CCCAGC 1 cut(s) 1886
GsuI CTGGAG 3 cut(s) 471, 981, 1911
HaeIII GGCC 3 cut(s) 200, 874, 1887
HapII CCGG 1 cut(s) 1583
HgaI GACGC 2 cut(s) 34, 98
HhaI GCGC 2 cut(s) 417, 1120
Hin1I GRCGYC 1 cut(s) 45
Hin6I GCGC 2 cut(s) 415, 1118
HinP1I GCGC 2 cut(s) 415, 1118
HincII GTYRAC 3 cut(s) 30, 1182, 1378
HindII GTYRAC 3 cut(s) 30, 1182, 1378
HindIII AAGCTT 3 cut(s) 347, 578, 1263
HinfI GANTC 5 cut(s) 157, 302, 1201, 1654, 1664
HpaII CCGG 1 cut(s) 1583
HphI GGTGA 3 cut(s) 617, 695, 817
Hpy166II GTNNAC 5 cut(s) 30, 57, 151, 1182, 1378
Hpy188III TCNNGA 8 cut(s) 49, 71, 161, 206, 488, 570, 1016, 1777
Hpy8I GTNNAC 5 cut(s) 30, 57, 151, 1182, 1378
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 5 cut(s) 757, 802, 926, 1471, 1971
HpyCH4III ACNGT 3 cut(s) 61, 410, 546
HpyCH4IV ACGT 2 cut(s) 900, 1900
HpyF10VI GCNNNNNNNGC 1 cut(s) 1793
HpyF3I CTNAG 5 cut(s) 69, 266, 306, 1208, 1838
HpySE526I ACGT 2 cut(s) 900, 1900
Hsp92I GRCGYC 1 cut(s) 45
HspAI GCGC 2 cut(s) 415, 1118
KflI GGGWCCC 1 cut(s) 916
Kzo9I GATC 3 cut(s) 367, 811, 1846
LguI GCTCTTC 1 cut(s) 1095
LmnI GCTCC 4 cut(s) 962, 1069, 1804, 1931
Lsp1109I GCAGC 3 cut(s) 463, 1794, 1797
LweI GCATC 6 cut(s) 236, 859, 993, 1613, 1660, 1796
MaeI CTAG 3 cut(s) 1106, 1322, 1920
MaeII ACGT 2 cut(s) 900, 1900
MaeIII GTNAC 3 cut(s) 683, 700, 1896
MalI GATC 3 cut(s) 369, 813, 1848
MbiI CCGCTC 1 cut(s) 1759
MboI GATC 3 cut(s) 367, 811, 1846
MhlI GDGCHC 4 cut(s) 118, 267, 954, 1889
MmeI TCCRAC 2 cut(s) 652, 727
Mph1103I ATGCAT 1 cut(s) 1224
MslI CAYNNNNRTG 1 cut(s) 819
MspA1I CMGCKG 1 cut(s) 959
MspI CCGG 1 cut(s) 1583
MspR9I CCNGG 5 cut(s) 91, 695, 990, 1583, 1890
Mva1269I GAATGC 2 cut(s) 417, 1772
MvaI CCWGG 4 cut(s) 91, 695, 990, 1890
MwoI GCNNNNNNNGC 1 cut(s) 1793
NciI CCSGG 1 cut(s) 1583
NcoI CCATGG 2 cut(s) 10, 1635
NdeII GATC 3 cut(s) 367, 811, 1846
NlaIV GGNNCC 5 cut(s) 75, 917, 918, 1887, 1927
NmuCI GTSAC 3 cut(s) 683, 700, 1896
NsbI TGCGCA 2 cut(s) 416, 1119
NsiI ATGCAT 1 cut(s) 1224
NspI RCATGY 4 cut(s) 389, 820, 1222, 1766
NspV TTCGAA 1 cut(s) 174
PaeI GCATGC 1 cut(s) 1766
PciI ACATGT 1 cut(s) 816
PciSI GCTCTTC 1 cut(s) 1095
PctI GAATGC 2 cut(s) 417, 1772
PfeI GAWTC 5 cut(s) 157, 302, 1201, 1654, 1664
PkrI GCNGC 4 cut(s) 478, 1761, 1809, 1812
Ple19I CGATCG 1 cut(s) 370
PmaCI CACGTG 1 cut(s) 1901
PmlI CACGTG 1 cut(s) 1901
Ppu21I YACGTR 1 cut(s) 1901
PpuMI RGGWCCY 2 cut(s) 163, 916
PscI ACATGT 1 cut(s) 816
PshAI GACNNNNGTC 1 cut(s) 1023
PshBI ATTAAT 3 cut(s) 504, 663, 1491
PsiI TTATAA 1 cut(s) 1143
Psp124BI GAGCTC 1 cut(s) 267
Psp5II RGGWCCY 2 cut(s) 163, 916
Psp6I CCWGG 4 cut(s) 89, 693, 988, 1888
PspCI CACGTG 1 cut(s) 1901
PspFI CCCAGC 1 cut(s) 1882
PspGI CCWGG 4 cut(s) 89, 693, 988, 1888
PspN4I GGNNCC 5 cut(s) 75, 917, 918, 1887, 1927
PspOMI GGGCCC 1 cut(s) 1885
PspPI GGNCC 6 cut(s) 163, 674, 916, 1058, 1885, 1886
PspPPI RGGWCCY 2 cut(s) 163, 916
PstI CTGCAG 1 cut(s) 1025
PvuI CGATCG 1 cut(s) 370
PvuII CAGCTG 1 cut(s) 959
RsaI GTAC 3 cut(s) 56, 982, 1556
RsaNI GTAC 3 cut(s) 55, 981, 1555
RseI CAYNNNNRTG 1 cut(s) 819
SacI GAGCTC 1 cut(s) 267
SalI GTCGAC 1 cut(s) 28
SapI GCTCTTC 1 cut(s) 1095
SatI GCNGC 4 cut(s) 477, 1760, 1808, 1811
Sau3AI GATC 3 cut(s) 367, 811, 1846
Sau96I GGNCC 6 cut(s) 163, 674, 916, 1058, 1885, 1886
ScaI AGTACT 1 cut(s) 1556
ScrFI CCNGG 5 cut(s) 91, 695, 990, 1583, 1890
SduI GDGCHC 4 cut(s) 118, 267, 954, 1889
SfaNI GCATC 6 cut(s) 236, 859, 993, 1613, 1660, 1796
SfcI CTRYAG 1 cut(s) 1021
SfuI TTCGAA 1 cut(s) 174
SinI GGWCC 4 cut(s) 163, 674, 916, 1058
SmiMI CAYNNNNRTG 1 cut(s) 819
SmlI CTYRAG 4 cut(s) 23, 281, 634, 1166
SmoI CTYRAG 4 cut(s) 23, 281, 634, 1166
SphI GCATGC 1 cut(s) 1766
SsiI CCGC 4 cut(s) 121, 169, 1759, 1852
SspI AATATT 1 cut(s) 1495
SspMI CTAG 3 cut(s) 1106, 1322, 1920
SstI GAGCTC 1 cut(s) 267
StyD4I CCNGG 5 cut(s) 89, 693, 988, 1581, 1888
StyI CCWWGG 4 cut(s) 10, 1371, 1635, 1749
TaaI ACNGT 3 cut(s) 61, 410, 546
TaiI ACGT 2 cut(s) 903, 1903
TaqI TCGA 5 cut(s) 29, 112, 174, 571, 690
TatI WGTACW 3 cut(s) 54, 980, 1554
TauI GCSGC 1 cut(s) 1762
TfiI GAWTC 5 cut(s) 157, 302, 1201, 1654, 1664
TscAI CASTG 3 cut(s) 760, 895, 1000
TseFI GTSAC 3 cut(s) 683, 700, 1896
TseI GCWGC 3 cut(s) 476, 1807, 1810
Tsp45I GTSAC 3 cut(s) 683, 700, 1896
TspRI CASTG 3 cut(s) 760, 895, 1000
VpaK11BI GGWCC 4 cut(s) 163, 674, 916, 1058
VspI ATTAAT 3 cut(s) 504, 663, 1491
XagI CCTNNNNNAGG 1 cut(s) 924
XapI RAATTY 2 cut(s) 1145, 1331
XceI RCATGY 4 cut(s) 389, 820, 1222, 1766
XmiI GTMKAC 1 cut(s) 29
XspI CTAG 3 cut(s) 1106, 1322, 1920
ZrmI AGTACT 1 cut(s) 1556
Zsp2I ATGCAT 1 cut(s) 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.