Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0009508

Physical Location & Seq

Genomic Coordinates Forward (+)

965013 .. 974319

Gene Structure 9307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g00990.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCTTTCACTTTCTCAGAATCTCATTCCATCCGGTTCCATGGCGTACGACGGAGGCAAACTCAAGTCGACCTCCATCAATGGTGTCAAGATGTACAGCGTTGCTTCCCAGCAACGCTCTCTCGCCACCTGGCTTAACCCTAAGAAGCGTCGAGCTCTTCGCAAAGACCAAAACTATATGCAAAGAGTGGACTTGATCCAGGATCTGAGGTTTGAAACTGCAACGACCAAAATCAAGGCAACTCCTGATGGAGAGTTTCTAATTGCAGCAGGTATTTACCCACCACAAGTCAAAGTTTATGAGCTGAGGGAACTTTCACTCAAGTTTGAAAGGCACTTGGACTCAGAGATAATTGATTTTCAGGTTTTGGCCGATGATTATTCAAAGCTTGCGTTTTTGTGTGCTGACCGTTCTGTTTATCTACATGCGAAATATGGAAAGCATTACAGTTTGCGGATTCCAAGAATGGGAAGGGATCTTGCATATGATTGCTGGTCTTGTGACTTGCTTTGTGCTGCCTCTTCTCCAGAATTATACAGGATTAATTTGGAACAGGGGCGATTCCTCTCTTCCCTTAGCACACAATCGCCTGCACTAAATATAGTTTCTCGGAGCAAGCTTCATGGTCTTGTTGCTTGTGGTGGTGAGGATGGTGCCGTGGAATGTTTTGACTTGAGAATGAAATCTTCAGCTGGCAGGATTAATGCTGTCGCACCCGCTGGTGACTTTGACCAGGAAGTCACTGCATTAGAGTTTGATGAAAAAACGGGTTTCCAATTGGCTGTTGGAAGCAGTGGTGGAAAGGTGTTCATCTATGACTTGCGCTCATCACATCCTATACAGGTTAAGGATCACATGTATGGTAGCCCGATATTAGACATTAAATGGCATCAAACTCTAAACTCTGAGGGGCCAAAGTTGATTACCACTGATAATCATATTGTTAGAATATGGGATCCTGACACGGGTGAAGGCATGACCAGCATTGAGCCAACGGCTGGCACAATTAATGATATTTGTACATTCCCTGGCAGTGGGTTGATGTTGCTTGCTCTGGACTGCAGTCAGATTCCATCTTATTTTATACCTGAACTTGGACCTGCTCCGAATTGGTGTTCTTACCTGCAAAACCTTACTGAGGAGCTAGAGGAGGGTGAACAGACTACCATTTATGATGATTTCAAATTTTTGACAAAAGAAGACCTCGAGAGGTTGAAGTTGACTGGTCTCATTGGGACCAGTCTACTTCGAGCTTACATGCATGGGTTTTTTATTGATTATCGGTTATATAAAAAGGCAAAAGCTTTGGCAGAGCCTTTTGATTATACTGAATACAGAGAACAGCGGAAACGAGAGGTGCTAGAGAAAGAACTTGCAGGAGAGCGAATTACGATTAAGAGGAAATTGCCCAAGGTCAATCGAACTCTTGCAAAGAGTATTCTTGATAATGAAGATGCAGAGAACGAAATTAATGTTGATGACAATGAGACTAAGAAGCCAACCAAGAAAAAGAAGGCACTTGCTAGTGATATTCTCAAAGACGAGCGGTTTGGAAAAATGTTTGAAAATGAGGATTTTGAAATTGATGAGTTCTCGCAAGAGTATAGGGCTCTACACCCTATGCCTTCTACGAAGCAGCCATCTTTGGTAGAGGAACATTTCAGACCTTCCATGGAGGATAATGATCCGGACTTGAGTGATTCTGATGCCTCAGCGACATCTTTGGATGAGCCTGGCCATGAAAACAGTAAACTGAGAATGAAGGGACGAACTCCAAGATTGTATGAAGTTAAGGATGAGCGGCATGCAGAAGCATTCTTGAATCGCGAGTCTTTTGCAAACGAGGAATCACTTCCACTGGGGGAGAGGGTGGCAGCCCTCAGAGATGATCGGCGAGTTTCTGCCATCCCGAATGATGTTAAGCTTGGACCTGGAGGCTCGCGTGAGATTTCTTTTAGGGCTAGAAGCAACTCTAAGTACAAAGAGGATGAGGATGACGAACACTGTGGAAAGAGGAGGGGAGTCCAATCATTAGGACTAAAACCAAATGGGCCTGGATTTGGAGGCCGAGGAGGAAGAGGAGGCCGAGGAAGAGGAGGGAGAGGAGGGCATCGCGGAAGAGGAAGAGGTGGCCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC153

Protein Analysis

713

Amino Acids

80.01

Weight (kDa)

6.28

Isoelectric Point (pI)

44.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56990 AT3G56990 AT3G56990
fragaria_vesca	FvH4_2g11640 FvH4_2g11640
malus_domestica	MD06G1011700.v1.1
prunus_persica	Prupe.5G014500_v2.0.a1 Prupe.5G014500_v2.0.a1 Prupe.8G004300_v2.0.a1
pyrus_communis	pycom06g00990
rosa_chinensis	RchiOBHm_Chr6g0270881
rosa_laevigata	RLG00000013762
rosa_multiflora	Rmu_sc0000642.1_g000031 Rmu_sc0007274.1_g000001
rosa_roxburghii	Rroxscaffold_7G00197520
rosa_rugosa	Rorug06G0056900 Rorug06G0057000
rosa_samantha	Rh6AG176500 Rh6BG179900 Rh6CG175900 Rh6DG168200
rosa_wichuraiana	Rw6G015040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	737
Acc36I	ACCTGC	3 cut(s)	260, 1108, 1131
AccB1I	GGYRCC	1 cut(s)	653
AccB7I	CCANNNNNTGG	1 cut(s)	998
AccBSI	CCGCTC	2 cut(s)	1546, 1801
AccI	GTMKAC	2 cut(s)	68, 1243
AccII	CGCG	3 cut(s)	1827, 1942, 2115
AccIII	TCCGGA	1 cut(s)	1687
AciI	CCGC	6 cut(s)	454, 717, 1345, 1546, 1801, 2115
AclWI	GGATC	7 cut(s)	190, 210, 483, 858, 950, 963, 1679
AcoI	YGGCCR	3 cut(s)	369, 1735, 2131
AcsI	RAATTY	1 cut(s)	1184
AcuI	CTGAAG	1 cut(s)	672
AfaI	GTAC	4 cut(s)	47, 95, 1021, 1979
AfiI	CCNNNNNNNGG	7 cut(s)	467, 965, 998, 1034, 1094, 1138, 2060
AflIII	ACRYGT	1 cut(s)	855
AgsI	TTSAA	8 cut(s)	215, 329, 384, 1183, 1216, 1565, 1580, 1822
AjnI	CCWGG	7 cut(s)	128, 198, 732, 1027, 1732, 1930, 2053
AluBI	AGCT	9 cut(s)	155, 304, 388, 619, 692, 1144, 1253, 1304, 1924
AluI	AGCT	9 cut(s)	155, 304, 388, 619, 692, 1144, 1253, 1304, 1924
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	2 cut(s)	1232, 1481
AlwI	GGATC	7 cut(s)	190, 210, 483, 858, 950, 963, 1679
AlwNI	CAGNNNCTG	1 cut(s)	205
Ama87I	CYCGRG	1 cut(s)	1205
Aor13HI	TCCGGA	1 cut(s)	1687
AoxI	GGCC	7 cut(s)	369, 911, 1735, 2051, 2065, 2083, 2131
ApeKI	GCWGC	4 cut(s)	266, 515, 1636, 1874
ApoI	RAATTY	1 cut(s)	1184
ArsI	GACNNNNNNTTYG	2 cut(s)	1532, 1564
AseI	ATTAAT	4 cut(s)	543, 702, 1008, 1470
Asp700I	GAANNNNTTC	1 cut(s)	1851
AspLEI	GCGC	1 cut(s)	825
AspS9I	GGNCC	5 cut(s)	911, 1097, 1236, 1928, 2051
AsuHPI	GGTGA	4 cut(s)	656, 734, 980, 1166
AvaI	CYCGRG	1 cut(s)	1205
AvaII	GGWCC	3 cut(s)	1097, 1236, 1928
BalI	TGGCCA	1 cut(s)	1737
BamHI	GGATCC	1 cut(s)	955
BanI	GGYRCC	1 cut(s)	653
BanII	GRGCYC	2 cut(s)	157, 1612
BbsI	GAAGAC	1 cut(s)	1206
Bbv12I	GWGCWC	1 cut(s)	157
BbvCI	CCTCAGC	2 cut(s)	305, 1711
BbvI	GCAGC	4 cut(s)	278, 502, 1648, 1886
BccI	CCATC	7 cut(s)	37, 83, 242, 644, 1081, 1648, 1913
BceAI	ACGGC	2 cut(s)	641, 1011
BcgI	CGANNNNNNTGC	2 cut(s)	1817, 1851
BciT130I	CCWGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
BcoDI	GTCTC	2 cut(s)	1232, 1481
BfaI	CTAG	4 cut(s)	1145, 1361, 1524, 1962
BfmI	CTRYAG	1 cut(s)	1060
BfuAI	ACCTGC	3 cut(s)	260, 1108, 1131
BisI	GCNGC	5 cut(s)	267, 516, 1637, 1802, 1875
BlsI	GCNGC	5 cut(s)	268, 517, 1638, 1803, 1876
Bme1390I	CCNGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
Bme18I	GGWCC	3 cut(s)	1097, 1236, 1928
BmeT110I	CYCGRG	1 cut(s)	1205
BmgT120I	GGNCC	5 cut(s)	911, 1097, 1236, 1928, 2051
BmiI	GGNNCC	5 cut(s)	37, 655, 912, 957, 1237
BmrFI	CCNGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
BmrI	ACTGGG	1 cut(s)	1868
BmsI	GCATC	4 cut(s)	898, 1444, 1696, 2119
BmuI	ACTGGG	1 cut(s)	1868
BoxI	GACNNNNGTC	1 cut(s)	1062
BpiI	GAAGAC	1 cut(s)	1206
BplI	GAGNNNNNCTC	2 cut(s)	45, 77
BpmI	CTGGAG	2 cut(s)	510, 1953
Bpu10I	CCTNAGC	3 cut(s)	305, 575, 1711
BpuEI	CTTGAG	4 cut(s)	47, 305, 694, 1714
BsaBI	GATNNNNATC	1 cut(s)	1683
BsaI	GGTCTC	1 cut(s)	1232
BsaJI	CCNNGG	7 cut(s)	39, 657, 1027, 1410, 1671, 2068, 2086
BsaWI	WCCGGW	2 cut(s)	32, 1687
Bsc4I	CCNNNNNNNGG	7 cut(s)	467, 965, 998, 1034, 1094, 1138, 2060
Bse118I	RCCGGY	1 cut(s)	2133
Bse1I	ACTGG	3 cut(s)	1228, 1239, 1863
Bse8I	GATNNNNATC	1 cut(s)	1683
BseAI	TCCGGA	1 cut(s)	1687
BseBI	CCWGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
BseDI	CCNNGG	7 cut(s)	39, 657, 1027, 1410, 1671, 2068, 2086
BseGI	GGATG	8 cut(s)	29, 655, 832, 1732, 1801, 1905, 1993, 1999
BseJI	GATNNNNATC	1 cut(s)	1683
BseLI	CCNNNNNNNGG	7 cut(s)	467, 965, 998, 1034, 1094, 1138, 2060
BseMII	CTCAG	9 cut(s)	29, 197, 296, 357, 897, 1128, 1725, 1745, 1894
BseNI	ACTGG	3 cut(s)	1228, 1239, 1863
BseRI	GAGGAG	7 cut(s)	1154, 1163, 2029, 2085, 2094, 2109, 2118
BseXI	GCAGC	4 cut(s)	278, 502, 1648, 1886
BseYI	CCCAGC	1 cut(s)	108
BsgI	GTGCAG	1 cut(s)	576
Bsh1236I	CGCG	3 cut(s)	1827, 1942, 2115
BshFI	GGCC	7 cut(s)	371, 913, 1737, 2053, 2067, 2085, 2133
BshNI	GGYRCC	1 cut(s)	653
BsiHKAI	GWGCWC	1 cut(s)	157
BsiHKCI	CYCGRG	1 cut(s)	1205
BsiSI	CCGG	3 cut(s)	33, 1688, 2134
BsiWI	CGTACG	1 cut(s)	45
BslFI	GGGAC	2 cut(s)	1249, 1779
BslI	CCNNNNNNNGG	7 cut(s)	467, 965, 998, 1034, 1094, 1138, 2060
BsmAI	GTCTC	2 cut(s)	1232, 1481
BsmFI	GGGAC	2 cut(s)	1249, 1779
BsmI	GAATGC	1 cut(s)	1814
BsnI	GGCC	7 cut(s)	371, 913, 1737, 2053, 2067, 2085, 2133
Bso31I	GGTCTC	1 cut(s)	1232
BsoBI	CYCGRG	1 cut(s)	1205
Bsp1286I	GDGCHC	2 cut(s)	157, 1612
Bsp13I	TCCGGA	1 cut(s)	1687
Bsp1407I	TGTACA	2 cut(s)	93, 1019
Bsp143I	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
Bsp19I	CCATGG	2 cut(s)	39, 1671
Bsp68I	TCGCGA	1 cut(s)	1827
BspACI	CCGC	6 cut(s)	454, 717, 1345, 1546, 1801, 2115
BspANI	GGCC	7 cut(s)	371, 913, 1737, 2053, 2067, 2085, 2133
BspCNI	CTCAG	9 cut(s)	28, 198, 297, 356, 898, 1129, 1724, 1746, 1893
BspEI	TCCGGA	1 cut(s)	1687
BspFNI	CGCG	3 cut(s)	1827, 1942, 2115
BspLI	GGNNCC	5 cut(s)	37, 655, 912, 957, 1237
BspMAI	CTGCAG	1 cut(s)	1064
BspMI	ACCTGC	3 cut(s)	260, 1108, 1131
BspPI	GGATC	7 cut(s)	190, 210, 483, 858, 950, 963, 1679
BspQI	GCTCTTC	1 cut(s)	162
BspT107I	GGYRCC	1 cut(s)	653
BspTNI	GGTCTC	1 cut(s)	1232
BsrBI	CCGCTC	2 cut(s)	1546, 1801
BsrFI	RCCGGY	1 cut(s)	2133
BsrGI	TGTACA	2 cut(s)	93, 1019
BsrI	ACTGG	3 cut(s)	1228, 1239, 1863
BssAI	RCCGGY	1 cut(s)	2133
BssECI	CCNNGG	7 cut(s)	39, 657, 1027, 1410, 1671, 2068, 2086
BssMI	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
BssT1I	CCWWGG	3 cut(s)	39, 1410, 1671
Bst2UI	CCWGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
Bst4CI	ACNGT	4 cut(s)	410, 449, 1748, 2006
Bst6I	CTCTTC	7 cut(s)	162, 526, 574, 2071, 2086, 2113, 2119
BstAUI	TGTACA	2 cut(s)	93, 1019
BstC8I	GCNNGC	8 cut(s)	390, 591, 617, 694, 1000, 1050, 1806, 1940
BstDSI	CCRYGG	3 cut(s)	39, 657, 1671
BstENI	CCTNNNNNAGG	1 cut(s)	1136
BstF5I	GGATG	8 cut(s)	29, 655, 832, 1732, 1801, 1905, 1993, 1999
BstFNI	CGCG	3 cut(s)	1827, 1942, 2115
BstHHI	GCGC	1 cut(s)	825
BstKTI	GATC	7 cut(s)	198, 205, 478, 853, 958, 1687, 1891
BstMAI	GTCTC	2 cut(s)	1232, 1481
BstMBI	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
BstMWI	GCNNNNNNNGC	1 cut(s)	981
BstNI	CCWGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
BstNSI	RCATGY	4 cut(s)	428, 859, 1261, 1808
BstPAI	GACNNNNGTC	1 cut(s)	1062
BstSCI	CCNGG	7 cut(s)	128, 198, 732, 1027, 1732, 1930, 2053
BstSFI	CTRYAG	1 cut(s)	1060
BstUI	CGCG	3 cut(s)	1827, 1942, 2115
BstV1I	GCAGC	4 cut(s)	278, 502, 1648, 1886
BstV2I	GAAGAC	1 cut(s)	1206
BstX2I	RGATCY	3 cut(s)	202, 475, 955
BstYI	RGATCY	3 cut(s)	202, 475, 955
BsuRI	GGCC	7 cut(s)	371, 913, 1737, 2053, 2067, 2085, 2133
BtgI	CCRYGG	3 cut(s)	39, 657, 1671
BtgZI	GCGATG	1 cut(s)	2096
BtsCI	GGATG	8 cut(s)	29, 655, 832, 1732, 1801, 1905, 1993, 1999
BtsI	GCAGTG	3 cut(s)	741, 799, 1039
BtsIMutI	CAGTG	6 cut(s)	741, 799, 927, 1039, 1856, 2002
BtuMI	TCGCGA	1 cut(s)	1827
BveI	ACCTGC	3 cut(s)	260, 1108, 1131
Cac8I	GCNNGC	8 cut(s)	390, 591, 617, 694, 1000, 1050, 1806, 1940
CaiI	CAGNNNCTG	1 cut(s)	205
CfoI	GCGC	1 cut(s)	825
Cfr10I	RCCGGY	1 cut(s)	2133
Cfr13I	GGNCC	5 cut(s)	911, 1097, 1236, 1928, 2051
CseI	GACGC	1 cut(s)	137
Csp6I	GTAC	4 cut(s)	46, 94, 1020, 1978
CviQI	GTAC	4 cut(s)	46, 94, 1020, 1978
DpnI	GATC	7 cut(s)	197, 204, 477, 852, 957, 1686, 1890
DpnII	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
DrdI	GACNNNNNNGTC	1 cut(s)	737
DseDI	GACNNNNNNGTC	1 cut(s)	737
EaeI	YGGCCR	3 cut(s)	369, 1735, 2131
Eam1104I	CTCTTC	7 cut(s)	162, 526, 574, 2071, 2086, 2113, 2119
EarI	CTCTTC	7 cut(s)	162, 526, 574, 2071, 2086, 2113, 2119
Ecl136II	GAGCTC	1 cut(s)	155
Eco130I	CCWWGG	3 cut(s)	39, 1410, 1671
Eco24I	GRGCYC	2 cut(s)	157, 1612
Eco31I	GGTCTC	1 cut(s)	1232
Eco47I	GGWCC	3 cut(s)	1097, 1236, 1928
Eco53kI	GAGCTC	1 cut(s)	155
Eco57I	CTGAAG	1 cut(s)	672
Eco88I	CYCGRG	1 cut(s)	1205
EcoICRI	GAGCTC	1 cut(s)	155
EcoNI	CCTNNNNNAGG	1 cut(s)	1136
EcoRII	CCWGG	7 cut(s)	128, 198, 732, 1027, 1732, 1930, 2053
EcoT14I	CCWWGG	3 cut(s)	39, 1410, 1671
EcoT22I	ATGCAT	1 cut(s)	1263
EcoT38I	GRGCYC	2 cut(s)	157, 1612
ErhI	CCWWGG	3 cut(s)	39, 1410, 1671
FaqI	GGGAC	2 cut(s)	1249, 1779
FauI	CCCGC	1 cut(s)	724
FauNDI	CATATG	1 cut(s)	484
FblI	GTMKAC	2 cut(s)	68, 1243
Fnu4HI	GCNGC	5 cut(s)	267, 516, 1637, 1802, 1875
FokI	GGATG	8 cut(s)	16, 662, 819, 1739, 1808, 1892, 2000, 2006
FriOI	GRGCYC	2 cut(s)	157, 1612
Fsp4HI	GCNGC	5 cut(s)	267, 516, 1637, 1802, 1875
FspBI	CTAG	4 cut(s)	1145, 1361, 1524, 1962
GlaI	GCGC	1 cut(s)	824
GluI	GCNGC	5 cut(s)	267, 516, 1637, 1802, 1875
GsaI	CCCAGC	1 cut(s)	112
GsuI	CTGGAG	2 cut(s)	510, 1953
HaeIII	GGCC	7 cut(s)	371, 913, 1737, 2053, 2067, 2085, 2133
HapII	CCGG	3 cut(s)	33, 1688, 2134
HgaI	GACGC	1 cut(s)	137
HhaI	GCGC	1 cut(s)	825
Hin6I	GCGC	1 cut(s)	823
HinP1I	GCGC	1 cut(s)	823
HincII	GTYRAC	2 cut(s)	69, 1221
HindII	GTYRAC	2 cut(s)	69, 1221
HindIII	AAGCTT	4 cut(s)	386, 617, 1302, 1922
HpaII	CCGG	3 cut(s)	33, 1688, 2134
HphI	GGTGA	4 cut(s)	656, 734, 980, 1166
Hpy166II	GTNNAC	6 cut(s)	69, 190, 1157, 1221, 1244, 1751
Hpy8I	GTNNAC	6 cut(s)	69, 190, 1157, 1221, 1244, 1751
Hpy99I	CGWCG	2 cut(s)	53, 153
HpyAV	CCTTC	6 cut(s)	465, 965, 1507, 1635, 1677, 1756
HpyCH4III	ACNGT	4 cut(s)	410, 449, 1748, 2006
HpyF10VI	GCNNNNNNNGC	1 cut(s)	981
HspAI	GCGC	1 cut(s)	823
Kpn2I	TCCGGA	1 cut(s)	1687
Kzo9I	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
LguI	GCTCTTC	1 cut(s)	162
LmnI	GCTCC	3 cut(s)	612, 1108, 1141
Lsp1109I	GCAGC	4 cut(s)	278, 502, 1648, 1886
LweI	GCATC	4 cut(s)	898, 1444, 1696, 2119
MaeI	CTAG	4 cut(s)	1145, 1361, 1524, 1962
MaeIII	GTNAC	3 cut(s)	500, 722, 739
MalI	GATC	7 cut(s)	197, 204, 477, 852, 957, 1686, 1890
MbiI	CCGCTC	2 cut(s)	1546, 1801
MboI	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
MfeI	CAATTG	1 cut(s)	776
MflI	RGATCY	3 cut(s)	202, 475, 955
MhlI	GDGCHC	2 cut(s)	157, 1612
MlsI	TGGCCA	1 cut(s)	1737
MluNI	TGGCCA	1 cut(s)	1737
MlyI	GAGTC	3 cut(s)	335, 1838, 2031
MmeI	TCCRAC	1 cut(s)	766
Mox20I	TGGCCA	1 cut(s)	1737
Mph1103I	ATGCAT	1 cut(s)	1263
MroI	TCCGGA	1 cut(s)	1687
MroXI	GAANNNNTTC	1 cut(s)	1851
MscI	TGGCCA	1 cut(s)	1737
MslI	CAYNNNNRTG	1 cut(s)	858
Msp20I	TGGCCA	1 cut(s)	1737
MspA1I	CMGCKG	3 cut(s)	692, 719, 1345
MspI	CCGG	3 cut(s)	33, 1688, 2134
MspR9I	CCNGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
MunI	CAATTG	1 cut(s)	776
Mva1269I	GAATGC	1 cut(s)	1814
MvaI	CCWGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
MvnI	CGCG	3 cut(s)	1827, 1942, 2115
MwoI	GCNNNNNNNGC	1 cut(s)	981
NcoI	CCATGG	2 cut(s)	39, 1671
NdeI	CATATG	1 cut(s)	484
NdeII	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
NlaIV	GGNNCC	5 cut(s)	37, 655, 912, 957, 1237
NmeAIII	GCCGAG	2 cut(s)	2093, 2111
NmuCI	GTSAC	3 cut(s)	500, 722, 739
NruI	TCGCGA	1 cut(s)	1827
NsiI	ATGCAT	1 cut(s)	1263
NspI	RCATGY	4 cut(s)	428, 859, 1261, 1808
PaeI	GCATGC	1 cut(s)	1808
PaeR7I	CTCGAG	1 cut(s)	1205
PciI	ACATGT	1 cut(s)	855
PciSI	GCTCTTC	1 cut(s)	162
PctI	GAATGC	1 cut(s)	1814
PdmI	GAANNNNTTC	1 cut(s)	1851
PfeI	GAWTC	7 cut(s)	19, 457, 561, 1069, 1700, 1822, 1847
Pfl23II	CGTACG	1 cut(s)	45
PflMI	CCANNNNNTGG	1 cut(s)	998
PfoI	TCCNGGA	1 cut(s)	198
PkrI	GCNGC	5 cut(s)	268, 517, 1638, 1803, 1876
PleI	GAGTC	3 cut(s)	335, 1837, 2030
PpsI	GAGTC	3 cut(s)	335, 1837, 2030
PscI	ACATGT	1 cut(s)	855
PshAI	GACNNNNGTC	1 cut(s)	1062
PshBI	ATTAAT	4 cut(s)	543, 702, 1008, 1470
Psp124BI	GAGCTC	1 cut(s)	157
Psp6I	CCWGG	7 cut(s)	128, 198, 732, 1027, 1732, 1930, 2053
PspFI	CCCAGC	1 cut(s)	108
PspGI	CCWGG	7 cut(s)	128, 198, 732, 1027, 1732, 1930, 2053
PspLI	CGTACG	1 cut(s)	45
PspN4I	GGNNCC	5 cut(s)	37, 655, 912, 957, 1237
PspPI	GGNCC	5 cut(s)	911, 1097, 1236, 1928, 2051
PstI	CTGCAG	1 cut(s)	1064
PstNI	CAGNNNCTG	1 cut(s)	205
PsuI	RGATCY	3 cut(s)	202, 475, 955
PvuII	CAGCTG	1 cut(s)	692
RruI	TCGCGA	1 cut(s)	1827
RsaI	GTAC	4 cut(s)	47, 95, 1021, 1979
RsaNI	GTAC	4 cut(s)	46, 94, 1020, 1978
RseI	CAYNNNNRTG	1 cut(s)	858
SacI	GAGCTC	1 cut(s)	157
SalI	GTCGAC	1 cut(s)	67
SapI	GCTCTTC	1 cut(s)	162
SatI	GCNGC	5 cut(s)	267, 516, 1637, 1802, 1875
Sau3AI	GATC	7 cut(s)	195, 202, 475, 850, 955, 1684, 1888
Sau96I	GGNCC	5 cut(s)	911, 1097, 1236, 1928, 2051
SchI	GAGTC	3 cut(s)	335, 1838, 2031
ScrFI	CCNGG	7 cut(s)	130, 200, 734, 1029, 1734, 1932, 2055
SduI	GDGCHC	2 cut(s)	157, 1612
SfaNI	GCATC	4 cut(s)	898, 1444, 1696, 2119
SfcI	CTRYAG	1 cut(s)	1060
Sfr274I	CTCGAG	1 cut(s)	1205
SinI	GGWCC	3 cut(s)	1097, 1236, 1928
SlaI	CTCGAG	1 cut(s)	1205
SmiMI	CAYNNNNRTG	1 cut(s)	858
SmlI	CTYRAG	5 cut(s)	62, 320, 673, 1205, 1693
SmoI	CTYRAG	5 cut(s)	62, 320, 673, 1205, 1693
SphI	GCATGC	1 cut(s)	1808
SsiI	CCGC	6 cut(s)	454, 717, 1345, 1546, 1801, 2115
SspMI	CTAG	4 cut(s)	1145, 1361, 1524, 1962
SstI	GAGCTC	1 cut(s)	157
StyD4I	CCNGG	7 cut(s)	128, 198, 732, 1027, 1732, 1930, 2053
StyI	CCWWGG	3 cut(s)	39, 1410, 1671
TaaI	ACNGT	4 cut(s)	410, 449, 1748, 2006
TaqI	TCGA	5 cut(s)	68, 151, 1206, 1249, 1420
TatI	WGTACW	3 cut(s)	93, 1019, 1977
TauI	GCSGC	1 cut(s)	1804
TfiI	GAWTC	7 cut(s)	19, 457, 561, 1069, 1700, 1822, 1847
TscAI	CASTG	6 cut(s)	748, 799, 934, 1039, 1863, 2009
TseFI	GTSAC	3 cut(s)	500, 722, 739
TseI	GCWGC	4 cut(s)	266, 515, 1636, 1874
Tsp45I	GTSAC	3 cut(s)	500, 722, 739
TspDTI	ATGAA	8 cut(s)	611, 695, 774, 799, 1464, 1755, 1775, 1800
TspGWI	ACGGA	1 cut(s)	66
TspRI	CASTG	6 cut(s)	748, 799, 934, 1039, 1863, 2009
Van91I	CCANNNNNTGG	1 cut(s)	998
VpaK11BI	GGWCC	3 cut(s)	1097, 1236, 1928
VspI	ATTAAT	4 cut(s)	543, 702, 1008, 1470
XagI	CCTNNNNNAGG	1 cut(s)	1136
XapI	RAATTY	1 cut(s)	1184
XceI	RCATGY	4 cut(s)	428, 859, 1261, 1808
XcmI	CCANNNNNNNNNTGG	1 cut(s)	782
XhoI	CTCGAG	1 cut(s)	1205
XmiI	GTMKAC	2 cut(s)	68, 1243
XmnI	GAANNNNTTC	1 cut(s)	1851
XspI	CTAG	4 cut(s)	1145, 1361, 1524, 1962
Zsp2I	ATGCAT	1 cut(s)	1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.