Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0009508

Physical Location & Seq

Genomic Coordinates Reverse (-)

40498254 .. 40504916

Gene Structure 6663 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013762

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGCTTACCATGGAGGCAATCTCAAGTCGACCTCCATCAATGGCGTCAAGATGTACAGCGTTGCTTCTCAGCAACCCTCTCTCGCCACCTGGCTTGACCCCAACAAGCGTCGAGCCCTCCGCAAAGACAAAAATTATATGCAAAGAGTGGACTTGATTCAGGACCTCCGCTTCGAAACTGCCACCACCAAAATCAAGGCCACTCCTGACGGCGAGTTCCTCATTGCATCAGGTATATACCCACCCCAAGTCAAGGTATATGAGCTCAGGGAACTTGCCCTCAAGTTTGAAAGGCACTTGGATTCTGAGATTATTGATTTTGAGGTTTTGGCTGATGATTATTCAAAGCTTGCGTTTTTATGTGCCGATCGTTCTGTTTATCTACATGCAAAATATGGAAAACATTACAGTTTGCGCATTCCAAGAATGGGTAGGGATATGGCTTATGATTGCTGGTCATGTGATTTGCTTTGTGCTGCCTCGTCTCCAGAACTTTACAGAATTAATTTGGAACAGGGGCGTTTTTTACCTTCCCTCAACACACAGTCGCCAGCGCTAAATGTAGTTTCTCGAAGCAAGCTTCATGGTTTAGTTGCTTGTGGTGGTGAGGATGGCGCTGTGGAATGTTTTGACTTGAGAATGAAATCTTCAGTTGGTAGGATTAATGCTGTTGGACCTGCTGGTGACATCGATCAGGAGGTCACAGCAGTAGAGTTTGATGAAAAAACGGGTTTCTTAATGGCTGTTGGAAGCATACAATGCGATTTGCTTATTTCTAGAAGATATAATTTTAGTTATGTTGTTATCGGAAATGCCCACCATGTTGATCATTCTCAACCTTTGCAATATCTACTTCCGATATTAGACATTAAGTGGCATCAAACTCTTAATTCTGAACGGCCAAAGTTAATTACCACTGACAATCACGTTGTTAGAATATGGGACCCTGACACAGGAGAAGGAATGACAAGCATTGAGCCCACAGCTGGAGCAATAAATGATATATGTACATTCCCTGGCAGTGGATTGATGCTGTTGGCTCTGGACTGCAGTCAGATACCATCGTATTTCATACCTGAACTCGGACCTGCTCCAAATTGGTGTTCTTACCTGCAAAATCTTACTGAAGAGCTAGAGGAGGGTGCGCAGACGACCATCTATGATGATTATAAATTTTTGACAAAAGAAGACCTTGAGAGGTTGAGGTTGACTAAGCTGATTGGAACGAATCTACTCAGAGCTTACATGCATGGGTTCTTTGTTCGTTATTCGTTGTATAAAAAGGCAAAAGCTTTGGTAGAGCCTTTTGATATTACTGAATACATTGAACAGCAGAAAAAGCAGAAGCTAGAAAAAGAATTTGCTGGACAGCGAATTACGAAAAAGAGAAAATTGCCCAAGGTCAACCAAAAGTTTGCAGAGAGGTTTTTGGAGTATGAAGAAGCAGAAAATGAAACTAAAGATATTGATGAAAATGAGACCAACAAGCCATCCAAGAAAAAGAAGGCACTTGATATTAATATTCTTAAAGATGAGCGATTTAAAGCAATGTTTGAAAATAAGGACTTTGAAATTGATGAGTACTCGCACGAATATAAGGCTTTACACCCGGTTTCTTCTAACAAGCGAGCATCTCTGGTGGAAGAACACTTCAGACCTGCCATGGAAGATGAAGATGAGAATCATAGTGATTCTGATGCAACATCAGAGGATGAGCCTGAATATGGAAACAGCAGAATAAAAGGGAAAGGACGAGCTCCAAGATTGATTGAGGCCAAGGATGAGCGGCATGCAGAGGCATTCAGGAGTGGTGCATCACTTGCACATGAGGAGTTGCTGCCATTGGGAGAAAGGGTAAAAGCCCTCAGAGATGATCGGTGGGTTTCTGCCCTCCCAAGTGGTGTTAAGCTGGGCCCTGGAGGGTCACGTGAGATTTCTTTCAGAGCTAGAGGCTCCTCAAAGTATAAAGAGGATGATGATGAAGAAGCAGAGCGTGGAAAGAGAAGGGGAGTTCATTCATTGGGGCTAAAGCAAAATAAGAATGGATTCGGAAGCCGAGGCAGAGGAGGCAGAGGGGGCAGAGGAGGCAGTGGGGGAAGAGGGGGCAGAGGAGGCAGTGTGGGGAGAGGTGGCAGAGGAGGAAGAGGCAGAAGAGGCGGCGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC153

Protein Analysis

722

Amino Acids

81.07

Weight (kDa)

7.27

Isoelectric Point (pI)

46.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_NOL10_N	PF23098	14 - 385	4.8e-44	Nucleolar protein 10-like, N-terminal domain
NOL10_2nd	PF23097	386 - 433	5e-22	Nucleolar protein 10-like, second domain
NUC153	PF08159	511 - 538	1.3e-12	NUC153 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56990 AT3G56990 AT3G56990
fragaria_vesca	FvH4_2g11640 FvH4_2g11640
malus_domestica	MD06G1011700.v1.1
prunus_persica	Prupe.5G014500_v2.0.a1 Prupe.5G014500_v2.0.a1 Prupe.8G004300_v2.0.a1
pyrus_communis	pycom06g00990
rosa_chinensis	RchiOBHm_Chr6g0270881
rosa_laevigata	RLG00000013762
rosa_multiflora	Rmu_sc0000642.1_g000031 Rmu_sc0007274.1_g000001
rosa_roxburghii	Rroxscaffold_7G00197520
rosa_rugosa	Rorug06G0056900 Rorug06G0057000
rosa_samantha	Rh6AG176500 Rh6BG179900 Rh6CG175900 Rh6DG168200
rosa_wichuraiana	Rw6G015040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1170
Acc16I	TGCGCA	2 cut(s)	416, 1146
Acc36I	ACCTGC	4 cut(s)	685, 1096, 1119, 1666
AccBSI	CCGCTC	1 cut(s)	1786
AccI	GTMKAC	1 cut(s)	29
AciI	CCGC	5 cut(s)	121, 169, 1786, 2157, 2160
AcoI	YGGCCR	1 cut(s)	899
AcsI	RAATTY	2 cut(s)	1172, 1358
AcuI	CTGAAG	3 cut(s)	633, 1146, 1636
AcvI	CACGTG	1 cut(s)	1928
AcyI	GRCGYC	1 cut(s)	45
AfaI	GTAC	3 cut(s)	56, 1009, 1583
AfeI	AGCGCT	1 cut(s)	555
AfiI	CCNNNNNNNGG	7 cut(s)	253, 428, 953, 986, 1022, 1082, 1724
AgsI	TTSAA	5 cut(s)	290, 345, 1328, 1556, 1571
AjnI	CCWGG	3 cut(s)	89, 1015, 1915
AjuI	GAANNNNNNNTTGG	2 cut(s)	1087, 1119
Alw21I	GWGCWC	2 cut(s)	267, 1759
Alw26I	GTCTC	2 cut(s)	489, 1472
Aor51HI	AGCGCT	1 cut(s)	555
AoxI	GGCC	4 cut(s)	198, 899, 1773, 1912
ApaI	GGGCCC	1 cut(s)	1916
ApeKI	GCWGC	2 cut(s)	476, 1837
ApoI	RAATTY	2 cut(s)	1172, 1358
ArsI	GACNNNNNNTTYG	2 cut(s)	155, 187
AseI	ATTAAT	3 cut(s)	504, 663, 1518
Asp700I	GAANNNNTTC	1 cut(s)	2045
AspLEI	GCGC	4 cut(s)	417, 556, 617, 1147
AspS9I	GGNCC	6 cut(s)	163, 674, 943, 1085, 1912, 1913
AsuC2I	CCSGG	1 cut(s)	1610
AsuHPI	GGTGA	2 cut(s)	617, 695
AsuII	TTCGAA	1 cut(s)	174
AvaII	GGWCC	4 cut(s)	163, 674, 943, 1085
BaeGI	GKGCMC	1 cut(s)	1916
BaeI	ACNNNNGTAYC	2 cut(s)	1049, 1082
BanII	GRGCYC	5 cut(s)	118, 267, 981, 1759, 1916
BbrPI	CACGTG	1 cut(s)	1928
BbsI	GAAGAC	1 cut(s)	1194
Bbv12I	GWGCWC	2 cut(s)	267, 1759
BbvI	GCAGC	2 cut(s)	463, 1824
BccI	CCATC	5 cut(s)	44, 605, 1069, 1163, 1498
BceAI	ACGGC	2 cut(s)	226, 914
BciT130I	CCWGG	3 cut(s)	91, 1017, 1917
BclI	TGATCA	1 cut(s)	826
BcnI	CCSGG	1 cut(s)	1610
BcoDI	GTCTC	2 cut(s)	489, 1472
BfaI	CTAG	4 cut(s)	777, 1133, 1349, 1947
BfmI	CTRYAG	1 cut(s)	1048
BfoI	RGCGCY	2 cut(s)	557, 618
BfuAI	ACCTGC	4 cut(s)	685, 1096, 1119, 1666
BisI	GCNGC	4 cut(s)	477, 1787, 1838, 2158
BlsI	GCNGC	4 cut(s)	478, 1788, 1839, 2159
BmcAI	AGTACT	1 cut(s)	1583
Bme1390I	CCNGG	4 cut(s)	91, 1017, 1610, 1917
Bme18I	GGWCC	4 cut(s)	163, 674, 943, 1085
BmgT120I	GGNCC	6 cut(s)	163, 674, 943, 1085, 1912, 1913
BmiI	GGNNCC	4 cut(s)	944, 945, 1914, 1954
BmrFI	CCNGG	4 cut(s)	91, 1017, 1610, 1917
BmsI	GCATC	6 cut(s)	236, 886, 1020, 1640, 1687, 1823
BoxI	GACNNNNGTC	1 cut(s)	1050
BpiI	GAAGAC	1 cut(s)	1194
BplI	GAGNNNNNCTC	1 cut(s)	38
BpmI	CTGGAG	3 cut(s)	471, 1008, 1938
Bpu10I	CCTNAGC	1 cut(s)	266
Bpu14I	TTCGAA	1 cut(s)	174
BpuEI	CTTGAG	4 cut(s)	8, 266, 655, 1214
BpuMI	CCSGG	1 cut(s)	1610
Bsa29I	ATCGAT	1 cut(s)	690
BsaAI	YACGTR	1 cut(s)	1928
BsaBI	GATNNNNATC	1 cut(s)	1680
BsaHI	GRCGYC	1 cut(s)	45
BsaI	GGTCTC	1 cut(s)	1472
BsaJI	CCNNGG	7 cut(s)	10, 1015, 1398, 1662, 1776, 1915, 2056
BsaXI	ACNNNNNCTCC	4 cut(s)	1839, 1869, 2103, 2133
Bsc4I	CCNNNNNNNGG	7 cut(s)	253, 428, 953, 986, 1022, 1082, 1724
Bse3DI	GCAATG	2 cut(s)	222, 1554
Bse8I	GATNNNNATC	1 cut(s)	1680
BseBI	CCWGG	3 cut(s)	91, 1017, 1917
BseCI	ATCGAT	1 cut(s)	690
BseDI	CCNNGG	7 cut(s)	10, 1015, 1398, 1662, 1776, 1915, 2056
BseGI	GGATG	5 cut(s)	616, 1490, 1717, 1786, 1978
BseJI	GATNNNNATC	1 cut(s)	1680
BseLI	CCNNNNNNNGG	7 cut(s)	253, 428, 953, 986, 1022, 1082, 1724
BseMI	GCAATG	2 cut(s)	222, 1554
BseMII	CTCAG	5 cut(s)	83, 280, 297, 1249, 1879
BseRI	GAGGAG	7 cut(s)	1151, 1844, 1945, 2079, 2097, 2124, 2151
BseSI	GKGCMC	1 cut(s)	1916
BseXI	GCAGC	2 cut(s)	463, 1824
BseYI	CCCAGC	1 cut(s)	1909
Bsh1285I	CGRYCG	1 cut(s)	370
BshFI	GGCC	4 cut(s)	200, 901, 1775, 1914
BshVI	ATCGAT	1 cut(s)	690
BsiEI	CGRYCG	1 cut(s)	370
BsiHKAI	GWGCWC	2 cut(s)	267, 1759
BsiSI	CCGG	1 cut(s)	1610
BslFI	GGGAC	1 cut(s)	956
BslI	CCNNNNNNNGG	7 cut(s)	253, 428, 953, 986, 1022, 1082, 1724
BsmAI	GTCTC	2 cut(s)	489, 1472
BsmBI	CGTCTC	1 cut(s)	489
BsmFI	GGGAC	1 cut(s)	956
BsmI	GAATGC	2 cut(s)	417, 1799
BsnI	GGCC	4 cut(s)	200, 901, 1775, 1914
Bso31I	GGTCTC	1 cut(s)	1472
Bsp119I	TTCGAA	1 cut(s)	174
Bsp120I	GGGCCC	1 cut(s)	1912
Bsp1286I	GDGCHC	5 cut(s)	118, 267, 981, 1759, 1916
Bsp1407I	TGTACA	2 cut(s)	54, 1007
Bsp143I	GATC	4 cut(s)	367, 691, 826, 1873
Bsp19I	CCATGG	2 cut(s)	10, 1662
BspACI	CCGC	5 cut(s)	121, 169, 1786, 2157, 2160
BspANI	GGCC	4 cut(s)	200, 901, 1775, 1914
BspCNI	CTCAG	5 cut(s)	82, 279, 298, 1248, 1878
BspDI	ATCGAT	1 cut(s)	690
BspLI	GGNNCC	4 cut(s)	944, 945, 1914, 1954
BspMAI	CTGCAG	1 cut(s)	1052
BspMI	ACCTGC	4 cut(s)	685, 1096, 1119, 1666
BspQI	GCTCTTC	1 cut(s)	1122
BspT104I	TTCGAA	1 cut(s)	174
BspTNI	GGTCTC	1 cut(s)	1472
BsrBI	CCGCTC	1 cut(s)	1786
BsrDI	GCAATG	2 cut(s)	222, 1554
BsrGI	TGTACA	2 cut(s)	54, 1007
BssECI	CCNNGG	7 cut(s)	10, 1015, 1398, 1662, 1776, 1915, 2056
BssMI	GATC	4 cut(s)	367, 691, 826, 1873
BssNI	GRCGYC	1 cut(s)	45
BssT1I	CCWWGG	4 cut(s)	10, 1398, 1662, 1776
Bst2UI	CCWGG	3 cut(s)	91, 1017, 1917
Bst4CI	ACNGT	2 cut(s)	410, 546
Bst6I	CTCTTC	4 cut(s)	1122, 2092, 2137, 2146
BstACI	GRCGYC	1 cut(s)	45
BstAPI	GCANNNNNTGC	2 cut(s)	759, 1820
BstAUI	TGTACA	2 cut(s)	54, 1007
BstBAI	YACGTR	1 cut(s)	1928
BstBI	TTCGAA	1 cut(s)	174
BstC8I	GCNNGC	5 cut(s)	351, 552, 578, 1629, 1791
BstDEI	CTNAG	6 cut(s)	69, 266, 306, 1212, 1235, 1865
BstDSI	CCRYGG	2 cut(s)	10, 1662
BstENI	CCTNNNNNAGG	1 cut(s)	951
BstF5I	GGATG	5 cut(s)	616, 1490, 1717, 1786, 1978
BstH2I	RGCGCY	2 cut(s)	557, 618
BstHHI	GCGC	4 cut(s)	417, 556, 617, 1147
BstKTI	GATC	4 cut(s)	370, 694, 829, 1876
BstMAI	GTCTC	2 cut(s)	489, 1472
BstMBI	GATC	4 cut(s)	367, 691, 826, 1873
BstMCI	CGRYCG	1 cut(s)	370
BstMWI	GCNNNNNNNGC	8 cut(s)	759, 1339, 1820, 2067, 2076, 2085, 2112, 2154
BstNI	CCWGG	3 cut(s)	91, 1017, 1917
BstNSI	RCATGY	3 cut(s)	389, 1249, 1793
BstPAI	GACNNNNGTC	1 cut(s)	1050
BstSCI	CCNGG	4 cut(s)	89, 1015, 1608, 1915
BstSFI	CTRYAG	1 cut(s)	1048
BstSLI	GKGCMC	1 cut(s)	1916
BstV1I	GCAGC	2 cut(s)	463, 1824
BstV2I	GAAGAC	1 cut(s)	1194
Bsu15I	ATCGAT	1 cut(s)	690
BsuRI	GGCC	4 cut(s)	200, 901, 1775, 1914
BsuTUI	ATCGAT	1 cut(s)	690
BtgI	CCRYGG	2 cut(s)	10, 1662
BtsCI	GGATG	5 cut(s)	616, 1490, 1717, 1786, 1978
BtsI	GCAGTG	3 cut(s)	1027, 2095, 2122
BtsIMutI	CAGTG	4 cut(s)	915, 1027, 2095, 2122
BveI	ACCTGC	4 cut(s)	685, 1096, 1119, 1666
Cac8I	GCNNGC	5 cut(s)	351, 552, 578, 1629, 1791
CfoI	GCGC	4 cut(s)	417, 556, 617, 1147
Cfr13I	GGNCC	6 cut(s)	163, 674, 943, 1085, 1912, 1913
ClaI	ATCGAT	1 cut(s)	690
CseI	GACGC	2 cut(s)	34, 98
Csp6I	GTAC	3 cut(s)	55, 1008, 1582
CspCI	CAANNNNNGTGG	2 cut(s)	76, 111
CviQI	GTAC	3 cut(s)	55, 1008, 1582
DdeI	CTNAG	6 cut(s)	69, 266, 306, 1212, 1235, 1865
DpnI	GATC	4 cut(s)	369, 693, 828, 1875
DpnII	GATC	4 cut(s)	367, 691, 826, 1873
DraI	TTTAAA	1 cut(s)	1543
EaeI	YGGCCR	1 cut(s)	899
Eam1104I	CTCTTC	4 cut(s)	1122, 2092, 2137, 2146
EarI	CTCTTC	4 cut(s)	1122, 2092, 2137, 2146
Ecl136II	GAGCTC	2 cut(s)	265, 1757
Eco130I	CCWWGG	4 cut(s)	10, 1398, 1662, 1776
Eco24I	GRGCYC	5 cut(s)	118, 267, 981, 1759, 1916
Eco31I	GGTCTC	1 cut(s)	1472
Eco47I	GGWCC	4 cut(s)	163, 674, 943, 1085
Eco47III	AGCGCT	1 cut(s)	555
Eco53kI	GAGCTC	2 cut(s)	265, 1757
Eco57I	CTGAAG	3 cut(s)	633, 1146, 1636
Eco72I	CACGTG	1 cut(s)	1928
EcoICRI	GAGCTC	2 cut(s)	265, 1757
EcoNI	CCTNNNNNAGG	1 cut(s)	951
EcoO109I	RGGNCCY	3 cut(s)	163, 943, 1913
EcoRII	CCWGG	3 cut(s)	89, 1015, 1915
EcoT14I	CCWWGG	4 cut(s)	10, 1398, 1662, 1776
EcoT22I	ATGCAT	1 cut(s)	1251
EcoT38I	GRGCYC	5 cut(s)	118, 267, 981, 1759, 1916
ErhI	CCWWGG	4 cut(s)	10, 1398, 1662, 1776
Esp3I	CGTCTC	1 cut(s)	489
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	1 cut(s)	956
FauI	CCCGC	1 cut(s)	2153
FbaI	TGATCA	1 cut(s)	826
FblI	GTMKAC	1 cut(s)	29
Fnu4HI	GCNGC	4 cut(s)	477, 1787, 1838, 2158
FokI	GGATG	5 cut(s)	623, 1477, 1724, 1793, 1985
FriOI	GRGCYC	5 cut(s)	118, 267, 981, 1759, 1916
Fsp4HI	GCNGC	4 cut(s)	477, 1787, 1838, 2158
FspBI	CTAG	4 cut(s)	777, 1133, 1349, 1947
FspI	TGCGCA	2 cut(s)	416, 1146
GlaI	GCGC	4 cut(s)	416, 555, 616, 1146
GluI	GCNGC	4 cut(s)	477, 1787, 1838, 2158
GsaI	CCCAGC	1 cut(s)	1913
GsuI	CTGGAG	3 cut(s)	471, 1008, 1938
HaeII	RGCGCY	2 cut(s)	557, 618
HaeIII	GGCC	4 cut(s)	200, 901, 1775, 1914
HapII	CCGG	1 cut(s)	1610
HgaI	GACGC	2 cut(s)	34, 98
HhaI	GCGC	4 cut(s)	417, 556, 617, 1147
Hin1I	GRCGYC	1 cut(s)	45
Hin6I	GCGC	4 cut(s)	415, 554, 615, 1145
HinP1I	GCGC	4 cut(s)	415, 554, 615, 1145
HincII	GTYRAC	3 cut(s)	30, 1209, 1405
HindII	GTYRAC	3 cut(s)	30, 1209, 1405
HindIII	AAGCTT	3 cut(s)	347, 578, 1290
HinfI	GANTC	6 cut(s)	157, 302, 1228, 1681, 1691, 2046
HpaII	CCGG	1 cut(s)	1610
HphI	GGTGA	2 cut(s)	617, 695
Hpy166II	GTNNAC	4 cut(s)	30, 151, 1209, 1405
Hpy188III	TCNNGA	9 cut(s)	49, 161, 206, 488, 570, 695, 777, 1043, 1804
Hpy8I	GTNNAC	4 cut(s)	30, 151, 1209, 1405
Hpy99I	CGWCG	1 cut(s)	114
HpyAV	CCTTC	4 cut(s)	540, 953, 1498, 1998
HpyCH4III	ACNGT	2 cut(s)	410, 546
HpyCH4IV	ACGT	2 cut(s)	927, 1927
HpyF10VI	GCNNNNNNNGC	8 cut(s)	759, 1339, 1820, 2067, 2076, 2085, 2112, 2154
HpyF3I	CTNAG	6 cut(s)	69, 266, 306, 1212, 1235, 1865
HpySE526I	ACGT	2 cut(s)	927, 1927
Hsp92I	GRCGYC	1 cut(s)	45
HspAI	GCGC	4 cut(s)	415, 554, 615, 1145
KflI	GGGWCCC	1 cut(s)	943
Ksp22I	TGATCA	1 cut(s)	826
Kzo9I	GATC	4 cut(s)	367, 691, 826, 1873
LguI	GCTCTTC	1 cut(s)	1122
LmnI	GCTCC	4 cut(s)	989, 1096, 1762, 1958
Lsp1109I	GCAGC	2 cut(s)	463, 1824
LweI	GCATC	6 cut(s)	236, 886, 1020, 1640, 1687, 1823
MaeI	CTAG	4 cut(s)	777, 1133, 1349, 1947
MaeII	ACGT	2 cut(s)	927, 1927
MaeIII	GTNAC	3 cut(s)	683, 700, 1923
MalI	GATC	4 cut(s)	369, 693, 828, 1875
MbiI	CCGCTC	1 cut(s)	1786
MboI	GATC	4 cut(s)	367, 691, 826, 1873
MhlI	GDGCHC	5 cut(s)	118, 267, 981, 1759, 1916
MmeI	TCCRAC	2 cut(s)	652, 727
Mph1103I	ATGCAT	1 cut(s)	1251
MroXI	GAANNNNTTC	1 cut(s)	2045
MspA1I	CMGCKG	1 cut(s)	986
MspI	CCGG	1 cut(s)	1610
MspR9I	CCNGG	4 cut(s)	91, 1017, 1610, 1917
Mva1269I	GAATGC	2 cut(s)	417, 1799
MvaI	CCWGG	3 cut(s)	91, 1017, 1917
MwoI	GCNNNNNNNGC	8 cut(s)	759, 1339, 1820, 2067, 2076, 2085, 2112, 2154
NciI	CCSGG	1 cut(s)	1610
NcoI	CCATGG	2 cut(s)	10, 1662
NdeII	GATC	4 cut(s)	367, 691, 826, 1873
NlaIV	GGNNCC	4 cut(s)	944, 945, 1914, 1954
NmeAIII	GCCGAG	1 cut(s)	2081
NmuCI	GTSAC	3 cut(s)	683, 700, 1923
NsbI	TGCGCA	2 cut(s)	416, 1146
NsiI	ATGCAT	1 cut(s)	1251
NspI	RCATGY	3 cut(s)	389, 1249, 1793
NspV	TTCGAA	1 cut(s)	174
PaeI	GCATGC	1 cut(s)	1793
PciSI	GCTCTTC	1 cut(s)	1122
PctI	GAATGC	2 cut(s)	417, 1799
PdmI	GAANNNNTTC	1 cut(s)	2045
PfeI	GAWTC	6 cut(s)	157, 302, 1228, 1681, 1691, 2046
PkrI	GCNGC	4 cut(s)	478, 1788, 1839, 2159
Ple19I	CGATCG	1 cut(s)	370
PmaCI	CACGTG	1 cut(s)	1928
PmlI	CACGTG	1 cut(s)	1928
Ppu21I	YACGTR	1 cut(s)	1928
PpuMI	RGGWCCY	2 cut(s)	163, 943
PshAI	GACNNNNGTC	1 cut(s)	1050
PshBI	ATTAAT	3 cut(s)	504, 663, 1518
PsiI	TTATAA	1 cut(s)	1170
Psp124BI	GAGCTC	2 cut(s)	267, 1759
Psp5II	RGGWCCY	2 cut(s)	163, 943
Psp6I	CCWGG	3 cut(s)	89, 1015, 1915
PspCI	CACGTG	1 cut(s)	1928
PspFI	CCCAGC	1 cut(s)	1909
PspGI	CCWGG	3 cut(s)	89, 1015, 1915
PspN4I	GGNNCC	4 cut(s)	944, 945, 1914, 1954
PspOMI	GGGCCC	1 cut(s)	1912
PspPI	GGNCC	6 cut(s)	163, 674, 943, 1085, 1912, 1913
PspPPI	RGGWCCY	2 cut(s)	163, 943
PstI	CTGCAG	1 cut(s)	1052
PvuI	CGATCG	1 cut(s)	370
PvuII	CAGCTG	1 cut(s)	986
RsaI	GTAC	3 cut(s)	56, 1009, 1583
RsaNI	GTAC	3 cut(s)	55, 1008, 1582
SacI	GAGCTC	2 cut(s)	267, 1759
SalI	GTCGAC	1 cut(s)	28
SapI	GCTCTTC	1 cut(s)	1122
SatI	GCNGC	4 cut(s)	477, 1787, 1838, 2158
Sau3AI	GATC	4 cut(s)	367, 691, 826, 1873
Sau96I	GGNCC	6 cut(s)	163, 674, 943, 1085, 1912, 1913
ScaI	AGTACT	1 cut(s)	1583
ScrFI	CCNGG	4 cut(s)	91, 1017, 1610, 1917
SduI	GDGCHC	5 cut(s)	118, 267, 981, 1759, 1916
SfaNI	GCATC	6 cut(s)	236, 886, 1020, 1640, 1687, 1823
SfcI	CTRYAG	1 cut(s)	1048
SfuI	TTCGAA	1 cut(s)	174
SinI	GGWCC	4 cut(s)	163, 674, 943, 1085
SmlI	CTYRAG	4 cut(s)	23, 281, 634, 1193
SmoI	CTYRAG	4 cut(s)	23, 281, 634, 1193
SphI	GCATGC	1 cut(s)	1793
SsiI	CCGC	5 cut(s)	121, 169, 1786, 2157, 2160
SspI	AATATT	1 cut(s)	1522
SspMI	CTAG	4 cut(s)	777, 1133, 1349, 1947
SstI	GAGCTC	2 cut(s)	267, 1759
StyD4I	CCNGG	4 cut(s)	89, 1015, 1608, 1915
StyI	CCWWGG	4 cut(s)	10, 1398, 1662, 1776
TaaI	ACNGT	2 cut(s)	410, 546
TaiI	ACGT	2 cut(s)	930, 1930
TaqI	TCGA	5 cut(s)	29, 112, 174, 571, 690
TatI	WGTACW	3 cut(s)	54, 1007, 1581
TauI	GCSGC	2 cut(s)	1789, 2160
TfiI	GAWTC	6 cut(s)	157, 302, 1228, 1681, 1691, 2046
TscAI	CASTG	4 cut(s)	922, 1027, 2095, 2122
TseFI	GTSAC	3 cut(s)	683, 700, 1923
TseI	GCWGC	2 cut(s)	476, 1837
Tsp45I	GTSAC	3 cut(s)	683, 700, 1923
TspRI	CASTG	4 cut(s)	922, 1027, 2095, 2122
VpaK11BI	GGWCC	4 cut(s)	163, 674, 943, 1085
VspI	ATTAAT	3 cut(s)	504, 663, 1518
XagI	CCTNNNNNAGG	1 cut(s)	951
XapI	RAATTY	2 cut(s)	1172, 1358
XbaI	TCTAGA	1 cut(s)	776
XceI	RCATGY	3 cut(s)	389, 1249, 1793
XmiI	GTMKAC	1 cut(s)	29
XmnI	GAANNNNTTC	1 cut(s)	2045
XspI	CTAG	4 cut(s)	777, 1133, 1349, 1947
ZrmI	AGTACT	1 cut(s)	1583
Zsp2I	ATGCAT	1 cut(s)	1251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.