Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011370

Physical Location & Seq

Genomic Coordinates Reverse (-)

1628918 .. 1633193

Gene Structure 4276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G014800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGGGTTTCACAAGATTTGGGCGGCCAAAAGGAGCGCAAGGGCAGTCGAGCCCCAACCTGTACGTGGCCAACTGTGGGCCAGCGGTGGGACTCTCCTATGACACCATTGTTTCGGTGTTTAGGGCCTTCGGTGAAATCAAAGGAGTCTATGCGGCTGATGAGAGCGGTGCTCGTGTTGTTGTGTGTTTTGCTGAAGAGGGCTGTGCCCAGAATGCCTTCAATGCACTGAATGGACGGCCTTGCGCTGAGCTTGGAGGGCGTTCCTTGCACATTCGCTATTCTGTGCTTCAACCCACTTCACAATCACAGGGCCGAGTCAATGACTCAGTTCCTGTATCTTTGCTGGCCTCAGAGCTAAACATTCCTGGCCTTTTCCTAATGCACGACTTTGTCACTGCTAAAGAAGAGGAGGAGTTTCTTGCAGCAGTTGATGAAAGGCCTTGGAAAAATCTTTCGAAAAGAAGGGTTCAGCATTATGGCTATGAATTTTGTTATGAAACAAGGAATGTTGATTCTAGAAAGAACTTAGGTGAACTTCCGGCATTTGTTTCTCCTATACTTAAAAGAATAGCTTTGCTTCCCATGCGTGAGGATGCTGAAGCTATAGTTTTGGACCAATTGACGGTTAATGAGTACCCACCTGGGGTGGGCTTGTCCCCACATATAGACACCCATTCTGCTTTTGAAGGATTAATTTTCAGCCTTTCGTTAGCAGGGCCTTGCATTATGGAGTTCAGAAGATATCTTGACGAGGGGTTGACTCCTAGAGCTTCCTCAAGTTCTGATATTGAAATAGAAAGTTCTGAAAACAATTCAAATTTCTTAAGGAGGGCCATCTATCTTCCTCCTCGATCTTTGCTACTGTTATCTGGAGAGGCACGCTATGCTTGGAATCATTACATTCCACATCATAAGATTGACATGGTGAAAGACAGTGTGATCAGAAGAGCCTCAAGAAGAGTATCTTTCACATTTCGTAAGGTCAGAGCAAGCCCTTGCCAATGTGAATTTTCCCAATATTGTGACTCTCAGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0001510 GO:0002097 GO:0002098 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008175 GO:0008198 GO:0008270 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016300 GO:0016491 GO:0016705 GO:0016706 GO:0016740 GO:0016741 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0051213 GO:0055114 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy_2

Protein Analysis

346

Amino Acids

38.54

Weight (kDa)

7.07

Isoelectric Point (pI)

60.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31600 AT1G31600 AT1G31600 AT1G31600
fragaria_vesca	FvH4_5g24670 FvH4_5g24670 FvH4_5g24670
malus_domestica	MD06G1012100.v1.1
prunus_persica	Prupe.5G014800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0215051
rosa_laevigata	RLG00000002696
rosa_multiflora	Rmu_sc0016046.1_g000004
rosa_roxburghii	Rroxscaffold_3G00244630
rosa_rugosa	Rorug07G0149700 Rorug07G0149800
rosa_samantha	Rh7AG286800 Rh7BG278300 Rh7CG306200 Rh7DG290300
rosa_wichuraiana	Rw7G024460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	165
AciI	CCGC	4 cut(s)	22, 83, 152, 165
AcoI	YGGCCR	2 cut(s)	23, 66
AcsI	RAATTY	3 cut(s)	485, 817, 1007
AcuI	CTGAAG	2 cut(s)	213, 618
AfaI	GTAC	2 cut(s)	62, 635
AfiI	CCNNNNNNNGG	6 cut(s)	64, 75, 86, 622, 643, 647
AflII	CTTAAG	1 cut(s)	823
AgsI	TTSAA	5 cut(s)	220, 290, 686, 791, 816
AjnI	CCWGG	2 cut(s)	364, 640
AluBI	AGCT	5 cut(s)	250, 355, 572, 602, 770
AluI	AGCT	5 cut(s)	250, 355, 572, 602, 770
Alw21I	GWGCWC	1 cut(s)	172
AlwNI	CAGNNNCTG	1 cut(s)	332
ApeKI	GCWGC	1 cut(s)	422
ApoI	RAATTY	3 cut(s)	485, 817, 1007
AseI	ATTAAT	1 cut(s)	692
Asp700I	GAANNNNTTC	1 cut(s)	215
AspLEI	GCGC	2 cut(s)	37, 245
AspS9I	GGNCC	6 cut(s)	77, 123, 310, 613, 716, 831
AsuHPI	GGTGA	3 cut(s)	143, 542, 937
AsuII	TTCGAA	1 cut(s)	455
AvaII	GGWCC	1 cut(s)	613
BaeGI	GKGCMC	1 cut(s)	208
BalI	TGGCCA	1 cut(s)	68
BanII	GRGCYC	1 cut(s)	53
BauI	CACGAG	1 cut(s)	171
Bbv12I	GWGCWC	1 cut(s)	172
BbvI	GCAGC	1 cut(s)	434
BccI	CCATC	1 cut(s)	842
BceAI	ACGGC	1 cut(s)	251
BciT130I	CCWGG	2 cut(s)	366, 642
BclI	TGATCA	1 cut(s)	939
BfaI	CTAG	2 cut(s)	516, 765
BfmI	CTRYAG	1 cut(s)	603
BfrI	CTTAAG	1 cut(s)	823
BisI	GCNGC	3 cut(s)	23, 153, 423
BlpI	GCTNAGC	1 cut(s)	246
BlsI	GCNGC	3 cut(s)	24, 154, 424
Bme1390I	CCNGG	2 cut(s)	366, 642
Bme18I	GGWCC	1 cut(s)	613
BmgT120I	GGNCC	6 cut(s)	77, 123, 310, 613, 716, 831
BmrFI	CCNGG	2 cut(s)	366, 642
BmsI	GCATC	1 cut(s)	583
BplI	GAGNNNNNCTC	2 cut(s)	154, 186
BpmI	CTGGAG	1 cut(s)	891
Bpu1102I	GCTNAGC	1 cut(s)	246
Bpu14I	TTCGAA	1 cut(s)	455
BpuEI	CTTGAG	2 cut(s)	760, 937
BsaAI	YACGTR	1 cut(s)	64
BsaJI	CCNNGG	2 cut(s)	440, 641
Bsc4I	CCNNNNNNNGG	6 cut(s)	64, 75, 86, 622, 643, 647
BseBI	CCWGG	2 cut(s)	366, 642
BseDI	CCNNGG	2 cut(s)	440, 641
BseGI	GGATG	1 cut(s)	598
BseLI	CCNNNNNNNGG	6 cut(s)	64, 75, 86, 622, 643, 647
BseMII	CTCAG	3 cut(s)	237, 339, 363
BseRI	GAGGAG	3 cut(s)	422, 425, 837
BseSI	GKGCMC	1 cut(s)	208
BseXI	GCAGC	1 cut(s)	434
BsiHKAI	GWGCWC	1 cut(s)	172
BsiSI	CCGG	1 cut(s)	539
BslFI	GGGAC	2 cut(s)	102, 640
BslI	CCNNNNNNNGG	6 cut(s)	64, 75, 86, 622, 643, 647
BsmFI	GGGAC	2 cut(s)	102, 640
BsmI	GAATGC	1 cut(s)	217
Bsp119I	TTCGAA	1 cut(s)	455
Bsp1286I	GDGCHC	3 cut(s)	53, 172, 208
Bsp143I	GATC	2 cut(s)	851, 939
Bsp1720I	GCTNAGC	1 cut(s)	246
BspACI	CCGC	4 cut(s)	22, 83, 152, 165
BspCNI	CTCAG	3 cut(s)	238, 338, 362
BspQI	GCTCTTC	1 cut(s)	940
BspT104I	TTCGAA	1 cut(s)	455
BspTI	CTTAAG	1 cut(s)	823
BsrBI	CCGCTC	1 cut(s)	165
BssECI	CCNNGG	2 cut(s)	440, 641
BssMI	GATC	2 cut(s)	851, 939
BssSI	CACGAG	1 cut(s)	171
BssT1I	CCWWGG	1 cut(s)	440
Bst2BI	CACGAG	1 cut(s)	171
Bst2UI	CCWGG	2 cut(s)	366, 642
Bst4CI	ACNGT	4 cut(s)	74, 625, 864, 935
Bst6I	CTCTTC	4 cut(s)	189, 399, 940, 952
BstAFI	CTTAAG	1 cut(s)	823
BstAPI	GCANNNNNTGC	1 cut(s)	884
BstBAI	YACGTR	1 cut(s)	64
BstBI	TTCGAA	1 cut(s)	455
BstC8I	GCNNGC	4 cut(s)	81, 345, 880, 991
BstDEI	CTNAG	5 cut(s)	246, 325, 349, 526, 1029
BstF5I	GGATG	1 cut(s)	598
BstHHI	GCGC	2 cut(s)	37, 245
BstKTI	GATC	2 cut(s)	854, 942
BstMBI	GATC	2 cut(s)	851, 939
BstMWI	GCNNNNNNNGC	6 cut(s)	212, 221, 256, 265, 583, 884
BstNI	CCWGG	2 cut(s)	366, 642
BstSCI	CCNGG	2 cut(s)	364, 640
BstSFI	CTRYAG	1 cut(s)	603
BstSLI	GKGCMC	1 cut(s)	208
BstV1I	GCAGC	1 cut(s)	434
BtsCI	GGATG	1 cut(s)	598
BtsI	GCAGTG	1 cut(s)	393
BtsIMutI	CAGTG	3 cut(s)	224, 393, 940
Cac8I	GCNNGC	4 cut(s)	81, 345, 880, 991
CaiI	CAGNNNCTG	1 cut(s)	332
CfoI	GCGC	2 cut(s)	37, 245
Cfr13I	GGNCC	6 cut(s)	77, 123, 310, 613, 716, 831
Csp6I	GTAC	2 cut(s)	61, 634
CviAII	CATG	2 cut(s)	583, 922
CviQI	GTAC	2 cut(s)	61, 634
DdeI	CTNAG	5 cut(s)	246, 325, 349, 526, 1029
DpnI	GATC	2 cut(s)	853, 941
DpnII	GATC	2 cut(s)	851, 939
EaeI	YGGCCR	2 cut(s)	23, 66
Eam1104I	CTCTTC	4 cut(s)	189, 399, 940, 952
EarI	CTCTTC	4 cut(s)	189, 399, 940, 952
Eco130I	CCWWGG	1 cut(s)	440
Eco147I	AGGCCT	1 cut(s)	439
Eco24I	GRGCYC	1 cut(s)	53
Eco32I	GATATC	1 cut(s)	743
Eco47I	GGWCC	1 cut(s)	613
Eco57I	CTGAAG	2 cut(s)	213, 618
EcoO109I	RGGNCCY	2 cut(s)	123, 716
EcoRII	CCWGG	2 cut(s)	364, 640
EcoRV	GATATC	1 cut(s)	743
EcoT14I	CCWWGG	1 cut(s)	440
EcoT38I	GRGCYC	1 cut(s)	53
ErhI	CCWWGG	1 cut(s)	440
FaeI	CATG	2 cut(s)	586, 925
FalI	AAGNNNNNCTT	4 cut(s)	556, 588, 949, 981
FaqI	GGGAC	2 cut(s)	102, 640
FatI	CATG	2 cut(s)	582, 921
FbaI	TGATCA	1 cut(s)	939
Fnu4HI	GCNGC	3 cut(s)	23, 153, 423
FokI	GGATG	1 cut(s)	605
FriOI	GRGCYC	1 cut(s)	53
Fsp4HI	GCNGC	3 cut(s)	23, 153, 423
FspBI	CTAG	2 cut(s)	516, 765
GlaI	GCGC	2 cut(s)	36, 244
GluI	GCNGC	3 cut(s)	23, 153, 423
GsuI	CTGGAG	1 cut(s)	891
HapII	CCGG	1 cut(s)	539
HhaI	GCGC	2 cut(s)	37, 245
Hin1II	CATG	2 cut(s)	586, 925
Hin6I	GCGC	2 cut(s)	35, 243
HinP1I	GCGC	2 cut(s)	35, 243
HincII	GTYRAC	1 cut(s)	759
HindII	GTYRAC	1 cut(s)	759
HinfI	GANTC	8 cut(s)	90, 144, 315, 323, 512, 760, 892, 1025
HpaII	CCGG	1 cut(s)	539
HphI	GGTGA	3 cut(s)	143, 542, 937
Hpy166II	GTNNAC	2 cut(s)	533, 759
Hpy188I	TCNGA	7 cut(s)	352, 737, 784, 805, 944, 986, 1032
Hpy188III	TCNNGA	4 cut(s)	516, 746, 870, 954
Hpy8I	GTNNAC	2 cut(s)	533, 759
HpyAV	CCTTC	4 cut(s)	136, 226, 456, 680
HpyCH4III	ACNGT	4 cut(s)	74, 625, 864, 935
HpyCH4IV	ACGT	1 cut(s)	63
HpyCH4V	TGCA	5 cut(s)	224, 268, 382, 422, 723
HpyF10VI	GCNNNNNNNGC	6 cut(s)	212, 221, 256, 265, 583, 884
HpyF3I	CTNAG	5 cut(s)	246, 325, 349, 526, 1029
HpySE526I	ACGT	1 cut(s)	63
Hsp92II	CATG	2 cut(s)	586, 925
HspAI	GCGC	2 cut(s)	35, 243
Ksp22I	TGATCA	1 cut(s)	939
Kzo9I	GATC	2 cut(s)	851, 939
LguI	GCTCTTC	1 cut(s)	940
LmnI	GCTCC	1 cut(s)	32
Lsp1109I	GCAGC	1 cut(s)	434
LweI	GCATC	1 cut(s)	583
MaeI	CTAG	2 cut(s)	516, 765
MaeII	ACGT	1 cut(s)	63
MaeIII	GTNAC	2 cut(s)	391, 1022
MalI	GATC	2 cut(s)	853, 941
MbiI	CCGCTC	1 cut(s)	165
MboI	GATC	2 cut(s)	851, 939
MboII	GAAGA	6 cut(s)	206, 416, 750, 833, 957, 969
MfeI	CAATTG	1 cut(s)	617
MhlI	GDGCHC	3 cut(s)	53, 172, 208
MlsI	TGGCCA	1 cut(s)	68
MluCI	AATT	6 cut(s)	485, 617, 693, 811, 817, 1007
MluNI	TGGCCA	1 cut(s)	68
MlyI	GAGTC	6 cut(s)	84, 153, 317, 324, 754, 1019
Mox20I	TGGCCA	1 cut(s)	68
MroXI	GAANNNNTTC	1 cut(s)	215
MscI	TGGCCA	1 cut(s)	68
MseI	TTAA	4 cut(s)	561, 627, 692, 824
Msp20I	TGGCCA	1 cut(s)	68
MspA1I	CMGCKG	1 cut(s)	83
MspCI	CTTAAG	1 cut(s)	823
MspI	CCGG	1 cut(s)	539
MspR9I	CCNGG	2 cut(s)	366, 642
MunI	CAATTG	1 cut(s)	617
Mva1269I	GAATGC	1 cut(s)	217
MvaI	CCWGG	2 cut(s)	366, 642
MwoI	GCNNNNNNNGC	6 cut(s)	212, 221, 256, 265, 583, 884
NdeII	GATC	2 cut(s)	851, 939
NlaIII	CATG	2 cut(s)	586, 925
NmeAIII	GCCGAG	1 cut(s)	338
NmuCI	GTSAC	2 cut(s)	391, 1022
NspV	TTCGAA	1 cut(s)	455
PceI	AGGCCT	1 cut(s)	439
PciSI	GCTCTTC	1 cut(s)	940
PctI	GAATGC	1 cut(s)	217
PdmI	GAANNNNTTC	1 cut(s)	215
PfeI	GAWTC	2 cut(s)	512, 892
PflFI	GACNNNGTC	1 cut(s)	389
PkrI	GCNGC	3 cut(s)	24, 154, 424
PleI	GAGTC	6 cut(s)	84, 152, 317, 323, 754, 1019
PpsI	GAGTC	6 cut(s)	84, 152, 317, 323, 754, 1019
Ppu21I	YACGTR	1 cut(s)	64
PshBI	ATTAAT	1 cut(s)	692
Psp6I	CCWGG	2 cut(s)	364, 640
PspGI	CCWGG	2 cut(s)	364, 640
PspPI	GGNCC	6 cut(s)	77, 123, 310, 613, 716, 831
PstNI	CAGNNNCTG	1 cut(s)	332
PsyI	GACNNNGTC	1 cut(s)	389
RsaI	GTAC	2 cut(s)	62, 635
RsaNI	GTAC	2 cut(s)	61, 634
SapI	GCTCTTC	1 cut(s)	940
SaqAI	TTAA	4 cut(s)	561, 627, 692, 824
SatI	GCNGC	3 cut(s)	23, 153, 423
Sau3AI	GATC	2 cut(s)	851, 939
Sau96I	GGNCC	6 cut(s)	77, 123, 310, 613, 716, 831
SchI	GAGTC	6 cut(s)	84, 153, 317, 324, 754, 1019
ScrFI	CCNGG	2 cut(s)	366, 642
SduI	GDGCHC	3 cut(s)	53, 172, 208
SfaNI	GCATC	1 cut(s)	583
SfcI	CTRYAG	1 cut(s)	603
SfuI	TTCGAA	1 cut(s)	455
SinI	GGWCC	1 cut(s)	613
SmlI	CTYRAG	3 cut(s)	775, 823, 952
SmoI	CTYRAG	3 cut(s)	775, 823, 952
Sse9I	AATT	6 cut(s)	485, 617, 693, 811, 817, 1007
SseBI	AGGCCT	1 cut(s)	439
SsiI	CCGC	4 cut(s)	22, 83, 152, 165
SspI	AATATT	1 cut(s)	1019
SspMI	CTAG	2 cut(s)	516, 765
StuI	AGGCCT	1 cut(s)	439
StyD4I	CCNGG	2 cut(s)	364, 640
StyI	CCWWGG	1 cut(s)	440
TaaI	ACNGT	4 cut(s)	74, 625, 864, 935
TaiI	ACGT	1 cut(s)	66
TaqI	TCGA	3 cut(s)	47, 455, 850
TasI	AATT	6 cut(s)	485, 617, 693, 811, 817, 1007
TauI	GCSGC	2 cut(s)	25, 155
TfiI	GAWTC	2 cut(s)	512, 892
Tru1I	TTAA	4 cut(s)	561, 627, 692, 824
Tru9I	TTAA	4 cut(s)	561, 627, 692, 824
TscAI	CASTG	3 cut(s)	231, 400, 940
TseFI	GTSAC	2 cut(s)	391, 1022
TseI	GCWGC	1 cut(s)	422
Tsp45I	GTSAC	2 cut(s)	391, 1022
TspDTI	ATGAA	3 cut(s)	447, 498, 510
TspRI	CASTG	3 cut(s)	231, 400, 940
Tth111I	GACNNNGTC	1 cut(s)	389
Vha464I	CTTAAG	1 cut(s)	823
VpaK11BI	GGWCC	1 cut(s)	613
VspI	ATTAAT	1 cut(s)	692
XapI	RAATTY	3 cut(s)	485, 817, 1007
XbaI	TCTAGA	1 cut(s)	515
XcmI	CCANNNNNNNNNTGG	1 cut(s)	61
XmnI	GAANNNNTTC	1 cut(s)	215
XspI	CTAG	2 cut(s)	516, 765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.