Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0008026

Physical Location & Seq

Genomic Coordinates Reverse (-)

2461282 .. 2466714

Gene Structure 5433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G022200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 816 bp

ATGGGGTCTTTCCCAGGTCATGCTCTGCCAGGGACGTTGTTTTTTGTAGTTGGGGTATGGCACGTATGGAGCTCGTTGGTGAGATATGTATCCAACCCCAAGTCCTTCCGAGTTCAGGTATGGAGTCCTGTGCCGGGTTTTGATGGGAGGCTCAAGTATTTGGAGCTTTATATTATAGCTATTGGTACTTTCATTGATATGTGTATCGAGCTTTTGTATTCGACCCATCTCAAGTTCTTTGTCAATGGAGTCTTGAACCCTTCTCACATGAATGATTTTGAGCACTCTGGAATGCTTCTTATGTTCTTTATCTTTGGCGTTGTCAGTCTGCTCTCAGAGAAGACAAGATTTCTTCCGTTGCCTGAAGGAGCTCTTTGTCTGATTGCTGCCACAGCATTCTGTGCAGAGTATCTTCTGTTCTACTTTCACTCAACAACTCATAAAGGCCTCGAGGGTTATTACCACATCCTCCTTGTCCTTCTAATTGGGCTCTGCATATTATCAACTGTTGCTGGAGCCCTCTTCCCAACCAGCTTTCCAATTGATTTATGTAGCGGTATTGCCATGACTCTACAAGGCCTCTGGTTTTATCAGACTGCATTCACTCTCTATGGCCCCATGATGCCAGATGGTTGTCAGCTTAAGGATGATACGATCTCATGTCATTCTGTGGACAATGAGGTCCGGGGTGAGTTGCTTGCAAACTTCCAGTTCTTTGTCCTGGTTCTTGGTGTACTTACTGCAGTTGTGGGAGGATATGGTTTTGTTGCTTTAAGATTTGGGCATTCTGATCCAAGGAGCTTGCGTGCGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF716

Protein Analysis

272

Amino Acids

30.12

Weight (kDa)

6.17

Isoelectric Point (pI)

30.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008026)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32127 AT1G32127
fragaria_vesca	FvH4_5g23820
malus_domestica	MD00G1000700.v1.1 MD06G1014200.v1.1
prunus_persica	Prupe.5G022200_v2.0.a1 Prupe.5G022200_v2.0.a1 Prupe.5G022200_v2.0.a1 Prupe.5G022200_v2.0.a1 Prupe.5G022200_v2.0.a1 Prupe.5G022200_v2.0.a1
pyrus_communis	pycom06g01120 pycom16g25410
rosa_chinensis	RchiOBHm_Chr7g0213211
rosa_laevigata	RLG00000002822
rosa_multiflora	Rmu_ssc0000084.1_g000015
rosa_roxburghii	Rroxscaffold_3G00246170
rosa_rugosa	Rorug07G0140200 Rorug07G0140300
rosa_samantha	Rh7AG271900 Rh7BG267600 Rh7CG291200 Rh7DG280000
rosa_wichuraiana	Rw7G023600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	680
AbsI	CCTCGAGG	1 cut(s)	449
AciI	CCGC	2 cut(s)	555, 809
AclWI	GGATC	1 cut(s)	785
AcuI	CTGAAG	1 cut(s)	384
AfaI	GTAC	2 cut(s)	187, 735
AfiI	CCNNNNNNNGG	2 cut(s)	115, 134
AflII	CTTAAG	1 cut(s)	641
AgsI	TTSAA	1 cut(s)	256
AjnI	CCWGG	3 cut(s)	13, 28, 720
AluBI	AGCT	8 cut(s)	72, 166, 179, 211, 371, 534, 640, 801
AluI	AGCT	8 cut(s)	72, 166, 179, 211, 371, 534, 640, 801
Alw21I	GWGCWC	3 cut(s)	74, 285, 373
AlwI	GGATC	1 cut(s)	785
Ama87I	CYCGRG	1 cut(s)	449
AoxI	GGCC	3 cut(s)	445, 577, 613
ApeKI	GCWGC	1 cut(s)	386
AspS9I	GGNCC	2 cut(s)	614, 682
AsuC2I	CCSGG	2 cut(s)	135, 686
AsuHPI	GGTGA	2 cut(s)	91, 701
AvaI	CYCGRG	1 cut(s)	449
AvaII	GGWCC	1 cut(s)	682
BanII	GRGCYC	4 cut(s)	74, 373, 492, 520
BbsI	GAAGAC	1 cut(s)	347
Bbv12I	GWGCWC	3 cut(s)	74, 285, 373
BbvI	GCAGC	1 cut(s)	373
BccI	CCATC	3 cut(s)	137, 234, 623
BciT130I	CCWGG	3 cut(s)	15, 30, 722
BciVI	GTATCC	1 cut(s)	100
BcnI	CCSGG	2 cut(s)	135, 686
BfmI	CTRYAG	1 cut(s)	741
BfrI	CTTAAG	1 cut(s)	641
BfuI	GTATCC	1 cut(s)	100
BisI	GCNGC	1 cut(s)	387
BlsI	GCNGC	1 cut(s)	388
Bme1390I	CCNGG	5 cut(s)	15, 30, 135, 686, 722
Bme18I	GGWCC	1 cut(s)	682
BmeT110I	CYCGRG	1 cut(s)	449
BmgT120I	GGNCC	2 cut(s)	614, 682
BmiI	GGNNCC	2 cut(s)	517, 616
BmrFI	CCNGG	5 cut(s)	15, 30, 135, 686, 722
BmsI	GCATC	1 cut(s)	612
BpiI	GAAGAC	1 cut(s)	347
BpmI	CTGGAG	1 cut(s)	534
BpuEI	CTTGAG	2 cut(s)	137, 215
BpuMI	CCSGG	2 cut(s)	135, 686
BsaAI	YACGTR	1 cut(s)	64
BsaBI	GATNNNNATC	1 cut(s)	88
BsaJI	CCNNGG	4 cut(s)	13, 29, 685, 794
BsaXI	ACNNNNNCTCC	1 cut(s)	790
Bsc4I	CCNNNNNNNGG	2 cut(s)	115, 134
Bse1I	ACTGG	1 cut(s)	709
Bse8I	GATNNNNATC	1 cut(s)	88
BseBI	CCWGG	3 cut(s)	15, 30, 722
BseDI	CCNNGG	4 cut(s)	13, 29, 685, 794
BseGI	GGATG	2 cut(s)	465, 652
BseJI	GATNNNNATC	1 cut(s)	88
BseLI	CCNNNNNNNGG	2 cut(s)	115, 134
BseMII	CTCAG	1 cut(s)	348
BseNI	ACTGG	1 cut(s)	709
BseXI	GCAGC	1 cut(s)	373
BsgI	GTGCAG	1 cut(s)	423
BshFI	GGCC	3 cut(s)	447, 579, 615
BsiHKAI	GWGCWC	3 cut(s)	74, 285, 373
BsiHKCI	CYCGRG	1 cut(s)	449
BsiSI	CCGG	2 cut(s)	134, 685
BslFI	GGGAC	1 cut(s)	46
BslI	CCNNNNNNNGG	2 cut(s)	115, 134
BsmFI	GGGAC	1 cut(s)	46
BsmI	GAATGC	4 cut(s)	297, 395, 599, 784
BsnI	GGCC	3 cut(s)	447, 579, 615
BsoBI	CYCGRG	1 cut(s)	449
Bsp1286I	GDGCHC	5 cut(s)	74, 285, 373, 492, 520
Bsp143I	GATC	2 cut(s)	654, 790
BspACI	CCGC	2 cut(s)	555, 809
BspANI	GGCC	3 cut(s)	447, 579, 615
BspCNI	CTCAG	1 cut(s)	347
BspLI	GGNNCC	2 cut(s)	517, 616
BspMAI	CTGCAG	1 cut(s)	745
BspPI	GGATC	1 cut(s)	785
BspTI	CTTAAG	1 cut(s)	641
BsrI	ACTGG	1 cut(s)	709
BssECI	CCNNGG	4 cut(s)	13, 29, 685, 794
BssMI	GATC	2 cut(s)	654, 790
BssT1I	CCWWGG	1 cut(s)	794
Bst2UI	CCWGG	3 cut(s)	15, 30, 722
Bst4CI	ACNGT	1 cut(s)	508
Bst6I	CTCTTC	1 cut(s)	527
BstAFI	CTTAAG	1 cut(s)	641
BstAPI	GCANNNNNTGC	1 cut(s)	401
BstBAI	YACGTR	1 cut(s)	64
BstC8I	GCNNGC	3 cut(s)	699, 803, 807
BstDEI	CTNAG	1 cut(s)	334
BstF5I	GGATG	2 cut(s)	465, 652
BstKTI	GATC	2 cut(s)	657, 793
BstMBI	GATC	2 cut(s)	654, 790
BstMWI	GCNNNNNNNGC	2 cut(s)	392, 401
BstNI	CCWGG	3 cut(s)	15, 30, 722
BstSCI	CCNGG	5 cut(s)	13, 28, 133, 684, 720
BstSFI	CTRYAG	1 cut(s)	741
BstV1I	GCAGC	1 cut(s)	373
BstV2I	GAAGAC	1 cut(s)	347
BsuI	GTATCC	1 cut(s)	100
BsuRI	GGCC	3 cut(s)	447, 579, 615
BtsCI	GGATG	2 cut(s)	465, 652
Cac8I	GCNNGC	3 cut(s)	699, 803, 807
Cfr13I	GGNCC	2 cut(s)	614, 682
Csp6I	GTAC	2 cut(s)	186, 734
CviAII	CATG	5 cut(s)	20, 268, 565, 619, 660
CviQI	GTAC	2 cut(s)	186, 734
DdeI	CTNAG	1 cut(s)	334
DpnI	GATC	2 cut(s)	656, 792
DpnII	GATC	2 cut(s)	654, 790
DrdI	GACNNNNNNGTC	1 cut(s)	680
DseDI	GACNNNNNNGTC	1 cut(s)	680
Eam1104I	CTCTTC	1 cut(s)	527
EarI	CTCTTC	1 cut(s)	527
Ecl136II	GAGCTC	2 cut(s)	72, 371
Eco130I	CCWWGG	1 cut(s)	794
Eco147I	AGGCCT	2 cut(s)	447, 579
Eco24I	GRGCYC	4 cut(s)	74, 373, 492, 520
Eco47I	GGWCC	1 cut(s)	682
Eco53kI	GAGCTC	2 cut(s)	72, 371
Eco57I	CTGAAG	1 cut(s)	384
Eco88I	CYCGRG	1 cut(s)	449
EcoICRI	GAGCTC	2 cut(s)	72, 371
EcoRII	CCWGG	3 cut(s)	13, 28, 720
EcoT14I	CCWWGG	1 cut(s)	794
EcoT38I	GRGCYC	4 cut(s)	74, 373, 492, 520
ErhI	CCWWGG	1 cut(s)	794
FaeI	CATG	5 cut(s)	23, 271, 568, 622, 663
FalI	AAGNNNNNCTT	2 cut(s)	357, 389
FaqI	GGGAC	1 cut(s)	46
FatI	CATG	5 cut(s)	19, 267, 564, 618, 659
Fnu4HI	GCNGC	1 cut(s)	387
FokI	GGATG	2 cut(s)	452, 659
FriOI	GRGCYC	4 cut(s)	74, 373, 492, 520
Fsp4HI	GCNGC	1 cut(s)	387
GluI	GCNGC	1 cut(s)	387
GsuI	CTGGAG	1 cut(s)	534
HaeIII	GGCC	3 cut(s)	447, 579, 615
HapII	CCGG	2 cut(s)	134, 685
Hin1II	CATG	5 cut(s)	23, 271, 568, 622, 663
HinfI	GANTC	3 cut(s)	124, 249, 568
HpaII	CCGG	2 cut(s)	134, 685
HphI	GGTGA	2 cut(s)	91, 701
Hpy166II	GTNNAC	2 cut(s)	673, 734
Hpy188I	TCNGA	5 cut(s)	110, 337, 381, 594, 790
Hpy188III	TCNNGA	2 cut(s)	253, 288
Hpy8I	GTNNAC	2 cut(s)	673, 734
HpyAV	CCTTC	4 cut(s)	115, 270, 359, 488
HpyCH4III	ACNGT	1 cut(s)	508
HpyCH4IV	ACGT	2 cut(s)	35, 63
HpyCH4V	TGCA	5 cut(s)	404, 495, 599, 701, 743
HpyF10VI	GCNNNNNNNGC	2 cut(s)	392, 401
HpyF3I	CTNAG	1 cut(s)	334
HpySE526I	ACGT	2 cut(s)	35, 63
Hsp92II	CATG	5 cut(s)	23, 271, 568, 622, 663
Kzo9I	GATC	2 cut(s)	654, 790
LmnI	GCTCC	5 cut(s)	69, 163, 368, 515, 798
Lsp1109I	GCAGC	1 cut(s)	373
LweI	GCATC	1 cut(s)	612
MaeII	ACGT	2 cut(s)	35, 63
MalI	GATC	2 cut(s)	656, 792
MboI	GATC	2 cut(s)	654, 790
MboII	GAAGA	4 cut(s)	344, 352, 404, 514
MfeI	CAATTG	1 cut(s)	540
MhlI	GDGCHC	5 cut(s)	74, 285, 373, 492, 520
MluCI	AATT	2 cut(s)	483, 540
MlyI	GAGTC	3 cut(s)	133, 258, 562
MmeI	TCCRAC	1 cut(s)	117
MnlI	CCTC	8 cut(s)	141, 445, 458, 479, 530, 590, 673, 746
MseI	TTAA	2 cut(s)	642, 773
MslI	CAYNNNNRTG	2 cut(s)	197, 270
MspCI	CTTAAG	1 cut(s)	641
MspI	CCGG	2 cut(s)	134, 685
MspR9I	CCNGG	5 cut(s)	15, 30, 135, 686, 722
MunI	CAATTG	1 cut(s)	540
Mva1269I	GAATGC	4 cut(s)	297, 395, 599, 784
MvaI	CCWGG	3 cut(s)	15, 30, 722
MwoI	GCNNNNNNNGC	2 cut(s)	392, 401
NciI	CCSGG	2 cut(s)	135, 686
NdeII	GATC	2 cut(s)	654, 790
NlaIII	CATG	5 cut(s)	23, 271, 568, 622, 663
NlaIV	GGNNCC	2 cut(s)	517, 616
PaeR7I	CTCGAG	1 cut(s)	449
PceI	AGGCCT	2 cut(s)	447, 579
PctI	GAATGC	4 cut(s)	297, 395, 599, 784
PkrI	GCNGC	1 cut(s)	388
PleI	GAGTC	3 cut(s)	132, 257, 562
PpsI	GAGTC	3 cut(s)	132, 257, 562
Ppu21I	YACGTR	1 cut(s)	64
Psp124BI	GAGCTC	2 cut(s)	74, 373
Psp6I	CCWGG	3 cut(s)	13, 28, 720
PspGI	CCWGG	3 cut(s)	13, 28, 720
PspN4I	GGNNCC	2 cut(s)	517, 616
PspPI	GGNCC	2 cut(s)	614, 682
PspXI	VCTCGAGB	1 cut(s)	449
PsrI	GAACNNNNNNTAC	2 cut(s)	401, 433
PstI	CTGCAG	1 cut(s)	745
RsaI	GTAC	2 cut(s)	187, 735
RsaNI	GTAC	2 cut(s)	186, 734
RseI	CAYNNNNRTG	2 cut(s)	197, 270
SacI	GAGCTC	2 cut(s)	74, 373
SaqAI	TTAA	2 cut(s)	642, 773
SatI	GCNGC	1 cut(s)	387
Sau3AI	GATC	2 cut(s)	654, 790
Sau96I	GGNCC	2 cut(s)	614, 682
SchI	GAGTC	3 cut(s)	133, 258, 562
ScrFI	CCNGG	5 cut(s)	15, 30, 135, 686, 722
SduI	GDGCHC	5 cut(s)	74, 285, 373, 492, 520
SfaNI	GCATC	1 cut(s)	612
SfcI	CTRYAG	1 cut(s)	741
Sfr274I	CTCGAG	1 cut(s)	449
SinI	GGWCC	1 cut(s)	682
SlaI	CTCGAG	1 cut(s)	449
SmiMI	CAYNNNNRTG	2 cut(s)	197, 270
SmlI	CTYRAG	4 cut(s)	152, 230, 449, 641
SmoI	CTYRAG	4 cut(s)	152, 230, 449, 641
Sse9I	AATT	2 cut(s)	483, 540
SseBI	AGGCCT	2 cut(s)	447, 579
SsiI	CCGC	2 cut(s)	555, 809
SstI	GAGCTC	2 cut(s)	74, 373
StuI	AGGCCT	2 cut(s)	447, 579
StyD4I	CCNGG	5 cut(s)	13, 28, 133, 684, 720
StyI	CCWWGG	1 cut(s)	794
TaaI	ACNGT	1 cut(s)	508
TaiI	ACGT	2 cut(s)	38, 66
TaqI	TCGA	3 cut(s)	207, 221, 450
TasI	AATT	2 cut(s)	483, 540
TatI	WGTACW	1 cut(s)	733
Tru1I	TTAA	2 cut(s)	642, 773
Tru9I	TTAA	2 cut(s)	642, 773
TseI	GCWGC	1 cut(s)	386
TspDTI	ATGAA	2 cut(s)	181, 284
TspGWI	ACGGA	1 cut(s)	345
Vha464I	CTTAAG	1 cut(s)	641
VpaK11BI	GGWCC	1 cut(s)	682
XhoI	CTCGAG	1 cut(s)	449

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.