Prupe.5G049500_v2.0.a1

Regulator of nonsense transcripts 1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
5216704 .. 5229775
13072 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G049500.2

Sequence Viewer

Length: 3831 bp
ATGGATTCGCAGCCAAACAACCTCTTTGAAACGGCGTCGCAGCCGGATACGGGTAACGACGCCTACACCTTCCTCGAATTCAACACCCAAGGCGAGGACTTTGACTACCCGGAGTTTCGTGACCCGATTCGGTCACCTGTGGCCTGGCCCACGCCGTCCGATTCTTTATCAGACCCTACAGACCGCGACCGTGGCGGTGGAGGAGTCGGGTCGGACCACCAGTCTGATGCGTCACCGGTTTCAGCTGCCCCGGGCAGCGCCACGAAGGCCAGGGCAGGTGGGTCGGGCAGTAGCGGCGGCAATAATCAGGTGGTTGACGTGCTAGCGGGTGGGATGAGTGTCCTCAACTTTGAGGACACTGGGGATGATGATAACTACGAGTACGGCAAAGGGAATTTCACAGAACATGCGTGCCGGTACTGCGGGGTGTCGAACCCGGCGTGCGTTGTGAGGTGTAACGTGCCTTCATGTCGAAAATGGTTCTGTAATTCGAGGGGGAACACGTCCGGCTCTCATATTGTGAATCACCTGGTTCGAGCAAAACACAAGGAAGTCTGTCTTCATAAAGATAGTCCATTGGGGGAAACGATCCTAGAATGCTACAATTGTGGATGTCGTAATGTATTCCTTCTTGGATTTATTTCAGCCAAGACAGAGAGTGTTGTTGTTCTTCTTTGTAGGGAACCCTGTTTAAGTGTTAATGCATTGAAGGATATGAACTGGGATCTGAGCCAGTGGTGTCCCCTGATTGATGATAGGTGTTTCTTGCAGTGGCTTGTTAAGGTCCCATCTGAACAGGAGCAGTTAAGGGCGCGCCAGATTAGTGCTCAACAAATAAATAAGGTAGAAGAACTATGGAAGACCAATCCTGACGCTTCCCTAGAAGATCTTGAGAAGCCTGGTGTGGATGATGAACCCCAACCTGTGGTCTTGAAGTATGAAGATGCTTACCAGTATCAAAATGTGTTTGCACCACTTATTAAACTTGAAGCTGACTATGATAAAATGATGAAAGAATCTCAAAGCAAAGACAATGTCACGATTCGGTGGGACATTGGTCTAAACAAGAAGCGTATTGCATATTTTGTTTTTCCAAAGGAAGATAATGAGTTGAGGCTTGTACCTGGTGATGAGCTGCGGCTTCGTTATTCTGGAGATGCAGCTCATCCAGCATGGCAGTCAGTAGGACATGTGATCAAGTTAACTGCGCAAGAGGAGGTCGCACTTGAACTTCGTGCCAGTCAGGGAGTTCCAGTTGATGTGAACCATGGCTTCAGTGTTGACTTCGTTTGGAAGAGTACAAGTTTTGATCGGATGCAGGGAGCCATGAAGGCTTTTGCAGTGGATGAGACAAGTGTTAGTGGATATATTTACCATCATTTATTAGGCCATGAAGTAGAGGTCCAAATGGTCCGTAATACATTGCCTCGTCGTTTTGGTGCGCCTGGTCTTCCGGAGCTCAATGCATCTCAAGTTTTTGCTGTGAAGAGTGTCCTCCAGAAGCCTATAAGTTTGATTCAGGGTCCACCTGGCACAGGAAAAACTGTTACTTCTGCAGCAATTGTGTATCACATGGCTAAACAAGGCCAGGGACAGGTTTTGGTTTGTGCTCCTAGTAATGTGGCTGTAGACCAACTAGCTGAGAAGATAAGTGCAACTGGGTTGAAGGTTGTTAGACTTTGTGCGAAATCAAGGGAAGCTGTAAGTTCTCCTGTCGAGCATTTAACCCTCCACTACCAGGTTCGTCATCTTGACACGTCAGAAAAGAGTGAACTTCACAAGTTACAACAATTGAAGGATGAGCAAGGAGAATTGTCTAGTAGTGATGAGAAGAAATATAAGGCACTGAAGCGGGCAACCGAGAGGGAGATTTCTCAGAGCGCTGATGTCATTTGTTGCACATGTGTTGGCGCTGGAGATCCTCGATTGGCAAATTTTAGGTTCCGTCAGGTACTGATTGATGAGTCTACTCAGGCAACAGAACCTGAATGCCTTATTCCTTTGGTTCTTGGGGCAAAGCAGGTTGTTCTTGTTGGTGATCACTGCCAGCTTGGTCCAGTCATTATGTGCAAGAAAGCAGCTCGTGCTGGGCTTGCCCAGTCTCTTTTTGAACGCCTCGTTTTACTTGGTGTGAAACCAATTAGATTGCAGGTTCAATACAGAATGCATCCAGCCTTGTCAGAGTTTCCATCTAACAGCTTCTATGAGGGCACACTTCAAAATGGAGTGACCATCAATGAAAGGCAATCATCAGGCATTGATTTTCCTTGGCCAGTTCCCAATCGTCCCATGTTCTTTTATGTACAGATGGGGCAAGAGGAGATAAGTGCTAGTGGAACATCCTATCTGAACAGAACTGAGGCTGCTAACGTTGAAAAGATTGTCACAACATTCTTGAGGAGTGGTGTAGTCCCTAGTCAGATTGGGGTGATAACACCATATGAGGGACAACGAGCTTATATTGTGAACTATATGTCCAGAAATGGTGCTCTCAGACAGCAACTTTATAAGGAAATTGAGGTTGCAAGTGTGGATTCATTTCAAGGAAGAGAAAAAGATTATATCATCCTTTCATGTGTTAGGAGTAATGAGCATCAGGGTATCGGATTCCTTAATGATCCTCGCCGTCTCAATGTTGCTCTAACACGTGCTCGATATGGTATTGTCATTCTTGGAAACCCTAAAGTTCTAAGTAAGCAGCCACTGTGGAATAGCCTACTGACACACTACAAGGAACACGAGTGCTTGGTTGAGGGGCCTCTAAATAACCTGAAGCAGAGTATGGTTCAATTTCCAAAGCCCAAAAAGATCTATAATGACCGGCGGCTATTCTTTGGTGGTGGTCCTGGAGTTATCCCAAATGATAGTTATGGGTCTATTGCCTCATCTGGCCAAAGTGCGGACAGAAGAAGTACTCGTGGTAGGGGTTCTTACTTACCTCCTGGCCCACCCAATGGTGCACATAAGCCTGGGGTACATCCTGCTGGATATCCAATGCCTCGGGCACCTCTTTCACCATTTCATGGTGGTCCCCTTTCTCAACCATATGCTATTCCAACTCGTGGAGCCGTGCATGGACCAGTTGGAGCTGTTCCTCATGTCCCTCAACCTGGAAGTCGAGGTTTTGGGGCTGGGCGTGGAAATGCAGGTGCTCCAATTGGCAGTCACCTCCCTCACCAACAAGGCACACAGCAGAACGTTGGAAATCTGGGGTCTACATTCAACTTTCCTGCCCTTGAAAATCCAAATAGCCAGCCATCTGTGGGTGGCCCATTATCTCAACCTGGATTTGTCAATAATATGCCACAAGGGCCAAGCCAAACATTTCGTGATGGATTTTCCATGGCGGGCATGTCTCAGGAATTCTTGGGTGATGACTTTAAAAGTCAGGGATCACATGTTCCTTATAATGTTGCTGACTTCTCCACTCAGGCTTCTCAAAGTGGATATGCTGTTGATTACGTTACTCAAGGTGCACAAGGTGGGTTTCCAGGGAACTTTATGAACCAGAATTCTCAAGCCGGATATTCTCGATTTGGTACAGGGAATGACTTCATGTCTCAGGACTACATGCCTCACGGATCACAAGGTCTATTTACTCAAGTGGGCTTTAATGACCCATCTCAGGATGATGCATCACAGAACCACTATGGTGTGGCCAATGCCAATCAACTTCAGTCTCAGGGATTTATGAATTCTCTGTACTCTCAGCCTTTTGCCCATTACAACACACAGCCAATGAACTTGCAGGCCCCACAACAGCAGCAGCAGCAGCAGCCACCTCAGCAGGGTCAGAGCTCCCAAAATCAGAAAATCCACTACAATGGTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1277

Amino Acids

139.91

Weight (kDa)

6.4

Isoelectric Point (pI)

49.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2508, 3408
AarI CACCTGC 2 cut(s) 266, 3137
Acc16I TGCGCA 1 cut(s) 1209
Acc36I ACCTGC 4 cut(s) 266, 2011, 2140, 3137
AccB1I GGYRCC 1 cut(s) 3004
AccB7I CCANNNNNTGG 4 cut(s) 925, 2954, 3023, 3062
AccI GTMKAC 3 cut(s) 1629, 1967, 3215
AccII CGCG 2 cut(s) 186, 814
AccIII TCCGGA 1 cut(s) 1453
AclI AACGTT 2 cut(s) 2370, 3198
AclWI GGATC 6 cut(s) 583, 732, 1913, 2612, 3400, 3589
AcoI YGGCCR 3 cut(s) 2270, 2890, 3657
AcsI RAATTY 6 cut(s) 77, 394, 1933, 3362, 3511, 3694
AcuI CTGAAG 4 cut(s) 1258, 1868, 2792, 3659
AcvI CACGTG 1 cut(s) 2648
AcyI GRCGYC 2 cut(s) 35, 60
AdeI CACNNNGTG 1 cut(s) 3482
AfeI AGCGCT 1 cut(s) 1882
AflIII ACRYGT 6 cut(s) 501, 1189, 1755, 1901, 2645, 3397
AgeI ACCGGT 1 cut(s) 235
AhdI GACNNNNNGTC 2 cut(s) 220, 3556
AjiI CACGTC 3 cut(s) 319, 504, 1758
AleI CACNNNNGTG 1 cut(s) 3651
AloI GAACNNNNNNTCC 4 cut(s) 2459, 2491, 3384, 3416
Alw21I GWGCWC 9 cut(s) 829, 1461, 1612, 2491, 2653, 2962, 3154, 3478, 3800
Alw26I GTCTC 6 cut(s) 1343, 2106, 2633, 3360, 3564, 3684
Alw44I GTGCAC 2 cut(s) 2958, 3474
AlwI GGATC 6 cut(s) 583, 732, 1913, 2612, 3400, 3589
AlwNI CAGNNNCTG 3 cut(s) 1954, 1985, 2704
Ama87I CYCGRG 2 cut(s) 250, 3000
Aor13HI TCCGGA 1 cut(s) 1453
Aor51HI AGCGCT 1 cut(s) 1882
ApaLI GTGCAC 2 cut(s) 2958, 3474
ApoI RAATTY 6 cut(s) 77, 394, 1933, 3362, 3511, 3694
ArsI GACNNNNNNTTYG 2 cut(s) 1020, 1052
AscI GGCGCGCC 1 cut(s) 812
AsiGI ACCGGT 1 cut(s) 235
Asp700I GAANNNNTTC 1 cut(s) 3551
AspLEI GCGC 7 cut(s) 260, 814, 816, 1210, 1444, 1883, 1913
AsuC2I CCSGG 4 cut(s) 110, 251, 252, 437
AsuNHI GCTAGC 1 cut(s) 322
AvaI CYCGRG 2 cut(s) 250, 3000
AvaII GGWCC 9 cut(s) 214, 784, 1402, 1411, 1523, 2054, 2843, 3029, 3077
BaeGI GKGCMC 4 cut(s) 2213, 2962, 3007, 3478
BalI TGGCCA 3 cut(s) 2272, 2892, 3659
BanI GGYRCC 1 cut(s) 3004
BanII GRGCYC 2 cut(s) 1461, 3800
BarI GAAGNNNNNNTAC 2 cut(s) 448, 480
BauI CACGAG 4 cut(s) 2082, 2738, 2916, 3060
BbrPI CACGTG 1 cut(s) 2648
BbsI GAAGAC 3 cut(s) 551, 866, 1442
Bbv12I GWGCWC 9 cut(s) 829, 1461, 1612, 2491, 2653, 2962, 3154, 3478, 3800
BbvCI CCTCAGC 1 cut(s) 3783
BccI CCATC 8 cut(s) 796, 1383, 2197, 2240, 2302, 3265, 3326, 3628
BceAI ACGGC 5 cut(s) 48, 139, 400, 2610, 3053
BcgI CGANNNNNNTGC 2 cut(s) 264, 298
BciVI GTATCC 1 cut(s) 40
BclI TGATCA 2 cut(s) 1194, 2038
BcnI CCSGG 4 cut(s) 110, 251, 252, 437
BcoDI GTCTC 6 cut(s) 1343, 2106, 2633, 3360, 3564, 3684
BfaI CTAG 8 cut(s) 323, 593, 881, 1614, 1637, 1818, 2331, 2415
BfmI CTRYAG 3 cut(s) 177, 1554, 1626
BfoI RGCGCY 3 cut(s) 261, 1884, 1914
BfuAI ACCTGC 4 cut(s) 266, 2011, 2140, 3137
BfuI GTATCC 1 cut(s) 40
BglI GCCNNNNNGGC 3 cut(s) 266, 1331, 3310
BglII AGATCT 2 cut(s) 886, 2808
BmcAI AGTACT 1 cut(s) 2914
Bme18I GGWCC 9 cut(s) 214, 784, 1402, 1411, 1523, 2054, 2843, 3029, 3077
BmeRI GACNNNNNGTC 2 cut(s) 220, 3556
BmeT110I CYCGRG 2 cut(s) 250, 3000
BmgBI CACGTC 3 cut(s) 319, 504, 1758
BmrI ACTGGG 4 cut(s) 369, 730, 1668, 2092
BmsI GCATC 9 cut(s) 217, 934, 1147, 1305, 1475, 2176, 2602, 3622, 3644
BmtI GCTAGC 1 cut(s) 326
BmuI ACTGGG 4 cut(s) 369, 730, 1668, 2092
BoxI GACNNNNGTC 1 cut(s) 1056
BpiI GAAGAC 3 cut(s) 551, 866, 1442
BpmI CTGGAG 4 cut(s) 1173, 1481, 1935, 2868
Bpu10I CCTNAGC 1 cut(s) 3783
BpuEI CTTGAG 6 cut(s) 911, 1455, 2416, 3453, 3501, 3585
BpuMI CCSGG 4 cut(s) 110, 251, 252, 437
BsaAI YACGTR 1 cut(s) 2648
BsaHI GRCGYC 2 cut(s) 35, 60
BsaWI WCCGGW 2 cut(s) 235, 1453
BsaXI ACNNNNNCTCC 2 cut(s) 1239, 1269
Bse118I RCCGGY 3 cut(s) 235, 414, 2820
Bse3DI GCAATG 1 cut(s) 1421
BseAI TCCGGA 1 cut(s) 1453
BseMI GCAATG 1 cut(s) 1421
BsePI GCGCGC 1 cut(s) 812
BseRI GAGGAG 4 cut(s) 216, 1229, 2333, 2413
BseSI GKGCMC 4 cut(s) 2213, 2962, 3007, 3478
BseYI CCCAGC 2 cut(s) 2087, 3131
Bsh1236I CGCG 2 cut(s) 186, 814
Bsh1285I CGRYCG 1 cut(s) 190
BshNI GGYRCC 1 cut(s) 3004
BshTI ACCGGT 1 cut(s) 235
BsiEI CGRYCG 1 cut(s) 190
BsiHKAI GWGCWC 9 cut(s) 829, 1461, 1612, 2491, 2653, 2962, 3154, 3478, 3800
BsiHKCI CYCGRG 2 cut(s) 250, 3000
BslFI GGGAC 9 cut(s) 726, 770, 1064, 1605, 2271, 2396, 2460, 3015, 3086
BsmAI GTCTC 6 cut(s) 1343, 2106, 2633, 3360, 3564, 3684
BsmBI CGTCTC 1 cut(s) 2633
BsmFI GGGAC 9 cut(s) 726, 770, 1064, 1605, 2271, 2396, 2460, 3015, 3086
BsmI GAATGC 3 cut(s) 602, 1994, 2169
BsoBI CYCGRG 2 cut(s) 250, 3000
Bsp13I TCCGGA 1 cut(s) 1453
Bsp1407I TGTACA 1 cut(s) 2302
Bsp19I CCATGG 2 cut(s) 1267, 3342
BspEI TCCGGA 1 cut(s) 1453
BspFNI CGCG 2 cut(s) 186, 814
BspMAI CTGCAG 1 cut(s) 1558
BspMI ACCTGC 4 cut(s) 266, 2011, 2140, 3137
BspOI GCTAGC 1 cut(s) 326
BspPI GGATC 6 cut(s) 583, 732, 1913, 2612, 3400, 3589
BspT107I GGYRCC 1 cut(s) 3004
BsrDI GCAATG 1 cut(s) 1421
BsrFI RCCGGY 3 cut(s) 235, 414, 2820
BsrGI TGTACA 1 cut(s) 2302
BssAI RCCGGY 3 cut(s) 235, 414, 2820
BssHII GCGCGC 1 cut(s) 812
BssNI GRCGYC 2 cut(s) 35, 60
BssSI CACGAG 4 cut(s) 2082, 2738, 2916, 3060
BssT1I CCWWGG 4 cut(s) 88, 1267, 2267, 3342
Bst2BI CACGAG 4 cut(s) 2082, 2738, 2916, 3060
Bst4CI ACNGT 3 cut(s) 191, 1546, 2706
Bst6I CTCTTC 3 cut(s) 1289, 1481, 2542
BstACI GRCGYC 2 cut(s) 35, 60
BstAPI GCANNNNNTGC 1 cut(s) 2084
BstAUI TGTACA 1 cut(s) 2302
BstBAI YACGTR 1 cut(s) 2648
BstDSI CCRYGG 3 cut(s) 190, 1267, 3342
BstEII GGTNACC 1 cut(s) 132
BstENI CCTNNNNNAGG 1 cut(s) 1533
BstFNI CGCG 2 cut(s) 186, 814
BstH2I RGCGCY 3 cut(s) 261, 1884, 1914
BstHHI GCGC 7 cut(s) 260, 814, 816, 1210, 1444, 1883, 1913
BstMAI GTCTC 6 cut(s) 1343, 2106, 2633, 3360, 3564, 3684
BstMCI CGRYCG 1 cut(s) 190
BstNSI RCATGY 6 cut(s) 410, 1193, 1905, 3355, 3401, 3574
BstPAI GACNNNNGTC 1 cut(s) 1056
BstPI GGTNACC 1 cut(s) 132
BstSFI CTRYAG 3 cut(s) 177, 1554, 1626
BstSLI GKGCMC 4 cut(s) 2213, 2962, 3007, 3478
BstUI CGCG 2 cut(s) 186, 814
BstV2I GAAGAC 3 cut(s) 551, 866, 1442
BstX2I RGATCY 4 cut(s) 724, 886, 1918, 2808
BstXI CCANNNNNNTGG 1 cut(s) 3824
BstYI RGATCY 4 cut(s) 724, 886, 1918, 2808
BsuI GTATCC 1 cut(s) 40
BtgI CCRYGG 3 cut(s) 190, 1267, 3342
BtrI CACGTC 3 cut(s) 319, 504, 1758
BtsI GCAGTG 3 cut(s) 776, 1347, 2041
BtsIMutI CAGTG 8 cut(s) 357, 740, 776, 1282, 1347, 1844, 2041, 2702
BveI ACCTGC 4 cut(s) 266, 2011, 2140, 3137
CaiI CAGNNNCTG 3 cut(s) 1954, 1985, 2704
CfoI GCGC 7 cut(s) 260, 814, 816, 1210, 1444, 1883, 1913
Cfr10I RCCGGY 3 cut(s) 235, 414, 2820
Cfr9I CCCGGG 1 cut(s) 250
CseI GACGC 4 cut(s) 24, 68, 219, 881
CsiI ACCWGGT 3 cut(s) 528, 1123, 1737
CspAI ACCGGT 1 cut(s) 235
DraI TTTAAA 1 cut(s) 3382
DraIII CACNNNGTG 1 cut(s) 3482
DriI GACNNNNNGTC 2 cut(s) 220, 3556
EaeI YGGCCR 3 cut(s) 2270, 2890, 3657
Eam1104I CTCTTC 3 cut(s) 1289, 1481, 2542
Eam1105I GACNNNNNGTC 2 cut(s) 220, 3556
EarI CTCTTC 3 cut(s) 1289, 1481, 2542
Ecl136II GAGCTC 2 cut(s) 1459, 3798
Eco130I CCWWGG 4 cut(s) 88, 1267, 2267, 3342
Eco24I GRGCYC 2 cut(s) 1461, 3800
Eco32I GATATC 1 cut(s) 2990
Eco47I GGWCC 9 cut(s) 214, 784, 1402, 1411, 1523, 2054, 2843, 3029, 3077
Eco47III AGCGCT 1 cut(s) 1882
Eco53kI GAGCTC 2 cut(s) 1459, 3798
Eco57I CTGAAG 4 cut(s) 1258, 1868, 2792, 3659
Eco72I CACGTG 1 cut(s) 2648
Eco88I CYCGRG 2 cut(s) 250, 3000
Eco91I GGTNACC 1 cut(s) 132
EcoICRI GAGCTC 2 cut(s) 1459, 3798
EcoNI CCTNNNNNAGG 1 cut(s) 1533
EcoO109I RGGNCCY 3 cut(s) 784, 2756, 3751
EcoO65I GGTNACC 1 cut(s) 132
EcoRI GAATTC 4 cut(s) 77, 3362, 3511, 3694
EcoRV GATATC 1 cut(s) 2990
EcoT14I CCWWGG 4 cut(s) 88, 1267, 2267, 3342
EcoT22I ATGCAT 4 cut(s) 706, 1468, 2169, 3637
EcoT38I GRGCYC 2 cut(s) 1461, 3800
ErhI CCWWGG 4 cut(s) 88, 1267, 2267, 3342
Esp3I CGTCTC 1 cut(s) 2633
FalI AAGNNNNNCTT 2 cut(s) 543, 575
FaqI GGGAC 9 cut(s) 726, 770, 1064, 1605, 2271, 2396, 2460, 3015, 3086
FauI CCCGC 4 cut(s) 319, 416, 1845, 3340
FauNDI CATATG 2 cut(s) 2440, 3046
FbaI TGATCA 2 cut(s) 1194, 2038
FblI GTMKAC 3 cut(s) 1629, 1967, 3215
FriOI GRGCYC 2 cut(s) 1461, 3800
FspBI CTAG 8 cut(s) 323, 593, 881, 1614, 1637, 1818, 2331, 2415
FspI TGCGCA 1 cut(s) 1209
GlaI GCGC 7 cut(s) 259, 813, 815, 1209, 1443, 1882, 1912
GsaI CCCAGC 2 cut(s) 2091, 3135
GsuI CTGGAG 4 cut(s) 1173, 1481, 1935, 2868
HaeII RGCGCY 3 cut(s) 261, 1884, 1914
HgaI GACGC 4 cut(s) 24, 68, 219, 881
HhaI GCGC 7 cut(s) 260, 814, 816, 1210, 1444, 1883, 1913
Hin1I GRCGYC 2 cut(s) 35, 60
Hin6I GCGC 7 cut(s) 258, 812, 814, 1208, 1442, 1881, 1911
HinP1I GCGC 7 cut(s) 258, 812, 814, 1208, 1442, 1881, 1911
HincII GTYRAC 3 cut(s) 316, 1203, 1282
HindII GTYRAC 3 cut(s) 316, 1203, 1282
HpaI GTTAAC 1 cut(s) 1203
Hpy99I CGWCG 3 cut(s) 40, 62, 1434
HpyAV CCTTC 8 cut(s) 79, 259, 474, 638, 703, 1324, 1660, 1789
HpyCH4III ACNGT 3 cut(s) 191, 1546, 2706
HpyCH4IV ACGT 8 cut(s) 318, 459, 503, 1757, 2370, 2647, 3198, 3462
HpySE526I ACGT 8 cut(s) 318, 459, 503, 1757, 2370, 2647, 3198, 3462
Hsp92I GRCGYC 2 cut(s) 35, 60
HspAI GCGC 7 cut(s) 258, 812, 814, 1208, 1442, 1881, 1911
Kpn2I TCCGGA 1 cut(s) 1453
Ksp22I TGATCA 2 cut(s) 1194, 2038
KspAI GTTAAC 1 cut(s) 1203
LmnI GCTCC 8 cut(s) 799, 1322, 1456, 1615, 3065, 3086, 3157, 3803
LweI GCATC 9 cut(s) 217, 934, 1147, 1305, 1475, 2176, 2602, 3622, 3644
MabI ACCWGGT 3 cut(s) 528, 1123, 1737
MaeI CTAG 8 cut(s) 323, 593, 881, 1614, 1637, 1818, 2331, 2415
MaeII ACGT 8 cut(s) 318, 459, 503, 1757, 2370, 2647, 3198, 3462
MfeI CAATTG 4 cut(s) 604, 1560, 1790, 3156
MflI RGATCY 4 cut(s) 724, 886, 1918, 2808
MlsI TGGCCA 3 cut(s) 2272, 2892, 3659
MluNI TGGCCA 3 cut(s) 2272, 2892, 3659
MlyI GAGTC 2 cut(s) 213, 1973
MmeI TCCRAC 4 cut(s) 192, 3064, 3080, 3181
Mox20I TGGCCA 3 cut(s) 2272, 2892, 3659
Mph1103I ATGCAT 4 cut(s) 706, 1468, 2169, 3637
MroI TCCGGA 1 cut(s) 1453
MroXI GAANNNNTTC 1 cut(s) 3551
MscI TGGCCA 3 cut(s) 2272, 2892, 3659
MslI CAYNNNNRTG 2 cut(s) 3651, 3822
Msp20I TGGCCA 3 cut(s) 2272, 2892, 3659
MspA1I CMGCKG 1 cut(s) 245
MunI CAATTG 4 cut(s) 604, 1560, 1790, 3156
Mva1269I GAATGC 3 cut(s) 602, 1994, 2169
MvnI CGCG 2 cut(s) 186, 814
NciI CCSGG 4 cut(s) 110, 251, 252, 437
NcoI CCATGG 2 cut(s) 1267, 3342
NdeI CATATG 2 cut(s) 2440, 3046
NheI GCTAGC 1 cut(s) 322
NmuCI GTSAC 7 cut(s) 119, 132, 231, 1036, 2227, 2383, 3164
NsbI TGCGCA 1 cut(s) 1209
NsiI ATGCAT 4 cut(s) 706, 1468, 2169, 3637
NspI RCATGY 6 cut(s) 410, 1193, 1905, 3355, 3401, 3574
OliI CACNNNNGTG 1 cut(s) 3651
PalAI GGCGCGCC 1 cut(s) 812
PaqCI CACCTGC 2 cut(s) 266, 3137
PauI GCGCGC 1 cut(s) 812
PciI ACATGT 3 cut(s) 1189, 1901, 3397
PcsI WCGNNNNNNNCGW 1 cut(s) 437
PctI GAATGC 3 cut(s) 602, 1994, 2169
PdmI GAANNNNTTC 1 cut(s) 3551
PfeI GAWTC 9 cut(s) 5, 127, 161, 523, 1016, 1042, 1516, 2534, 2607
PflFI GACNNNGTC 1 cut(s) 1034
PflMI CCANNNNNTGG 4 cut(s) 925, 2954, 3023, 3062
PfoI TCCNGGA 1 cut(s) 2845
PinAI ACCGGT 1 cut(s) 235
PleI GAGTC 2 cut(s) 212, 1972
PmaCI CACGTG 1 cut(s) 2648
PmlI CACGTG 1 cut(s) 2648
PpsI GAGTC 2 cut(s) 212, 1972
Ppu21I YACGTR 1 cut(s) 2648
PpuMI RGGWCCY 1 cut(s) 784
PscI ACATGT 3 cut(s) 1189, 1901, 3397
PshAI GACNNNNGTC 1 cut(s) 1056
PsiI TTATAA 2 cut(s) 2508, 3408
Psp124BI GAGCTC 2 cut(s) 1461, 3800
Psp1406I AACGTT 2 cut(s) 2370, 3198
Psp5II RGGWCCY 1 cut(s) 784
PspCI CACGTG 1 cut(s) 2648
PspEI GGTNACC 1 cut(s) 132
PspFI CCCAGC 2 cut(s) 2087, 3131
PspPPI RGGWCCY 1 cut(s) 784
PstI CTGCAG 1 cut(s) 1558
PstNI CAGNNNCTG 3 cut(s) 1954, 1985, 2704
PsuI RGATCY 4 cut(s) 724, 886, 1918, 2808
PsyI GACNNNGTC 1 cut(s) 1034
PteI GCGCGC 1 cut(s) 812
PvuII CAGCTG 1 cut(s) 245
RseI CAYNNNNRTG 2 cut(s) 3651, 3822
SacI GAGCTC 2 cut(s) 1461, 3800
ScaI AGTACT 1 cut(s) 2914
SchI GAGTC 2 cut(s) 213, 1973
SexAI ACCWGGT 3 cut(s) 528, 1123, 1737
SfaNI GCATC 9 cut(s) 217, 934, 1147, 1305, 1475, 2176, 2602, 3622, 3644
SfcI CTRYAG 3 cut(s) 177, 1554, 1626
SgsI GGCGCGCC 1 cut(s) 812
SinI GGWCC 9 cut(s) 214, 784, 1402, 1411, 1523, 2054, 2843, 3029, 3077
SmaI CCCGGG 1 cut(s) 252
SmiMI CAYNNNNRTG 2 cut(s) 3651, 3822
SmlI CTYRAG 6 cut(s) 890, 1470, 2395, 3468, 3516, 3600
SmoI CTYRAG 6 cut(s) 890, 1470, 2395, 3468, 3516, 3600
SspMI CTAG 8 cut(s) 323, 593, 881, 1614, 1637, 1818, 2331, 2415
SstI GAGCTC 2 cut(s) 1461, 3800
StyI CCWWGG 4 cut(s) 88, 1267, 2267, 3342
TaaI ACNGT 3 cut(s) 191, 1546, 2706
TaiI ACGT 8 cut(s) 321, 462, 506, 1760, 2373, 2650, 3201, 3465
TaqII GACCGA 1 cut(s) 120
TatI WGTACW 4 cut(s) 1298, 2302, 2912, 3702
TauI GCSGC 4 cut(s) 297, 300, 1141, 2827
TfiI GAWTC 9 cut(s) 5, 127, 161, 523, 1016, 1042, 1516, 2534, 2607
TscAI CASTG 8 cut(s) 364, 740, 776, 1282, 1347, 1851, 2048, 2709
TseFI GTSAC 7 cut(s) 119, 132, 231, 1036, 2227, 2383, 3164
Tsp45I GTSAC 7 cut(s) 119, 132, 231, 1036, 2227, 2383, 3164
TspGWI ACGGA 3 cut(s) 1403, 1934, 3594
TspMI CCCGGG 1 cut(s) 250
TspRI CASTG 8 cut(s) 364, 740, 776, 1282, 1347, 1851, 2048, 2709
Tth111I GACNNNGTC 1 cut(s) 1034
Van91I CCANNNNNTGG 4 cut(s) 925, 2954, 3023, 3062
VneI GTGCAC 2 cut(s) 2958, 3474
VpaK11BI GGWCC 9 cut(s) 214, 784, 1402, 1411, 1523, 2054, 2843, 3029, 3077
XagI CCTNNNNNAGG 1 cut(s) 1533
XapI RAATTY 6 cut(s) 77, 394, 1933, 3362, 3511, 3694
XceI RCATGY 6 cut(s) 410, 1193, 1905, 3355, 3401, 3574
XmaI CCCGGG 1 cut(s) 250
XmiI GTMKAC 3 cut(s) 1629, 1967, 3215
XmnI GAANNNNTTC 1 cut(s) 3551
XspI CTAG 8 cut(s) 323, 593, 881, 1614, 1637, 1818, 2331, 2415
ZrmI AGTACT 1 cut(s) 2914
Zsp2I ATGCAT 4 cut(s) 706, 1468, 2169, 3637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.