Prupe.5G060700_v2.0.a1

Polycomb group protein EMBRYONIC FLOWER

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
6530345 .. 6537446
7102 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G060700.1

Sequence Viewer

Length: 1287 bp
ATGTGCCTTCAAAATTCTTGTGCGCATTTGTCGGCAGAGGAGGCGGTTGCAATCGAAGAGAGTCTTTTGATATATTGCAAGCCAGTTGAGCTCTACAATATCCTTCGCCCCCGTGCTCTGCACAATCCTTTATTTCTGCGTAGATGTTTGCATTACAAAATCCAAGCAAGGCGCAAAAGGAGGTTCAGGACTGGGATTGTAATATTCAACTATAGGGACTACAACAACACGTTACAAAAGACTGAAGTTACTGAAGACTTCACGTGTCCCTTTTGCTTGATGCAATGTGCAAGCTTTAAGGGTCTGCGTTATCACCTGTGCTCTTCACATGACTTATTCAACTTTGAGTTTTGGGTAACTGGAGAGTACCAGGCAGTAAACGTTTCTGTGAAAATTGATGTATTGAGATCTGAGACTGTAGCAGATGGAGCAGTCCCACAACTTCAAACATTCTTCTTCTGTTCAAGGCCAAGAAAACGTAGGGCAGAGAACTGTGGTCAAAATGAAAAGCATGTTAATGTACAATTCTTGGAGTTAGACTCACCTAGACTAGCCAATGGAGTTGTACATGAGGGACTTTTGGAGAATGATGATGGTGAGAAGGCTTCCAAGGTGCATTGGAAAGATATCCAGCTTCCATCTACAGGTGAGAAGGCTTCCAAGCTGCGCGTCGAGTGGAAAGATATCCGGCATAGAAGGCATGAACATGAAAACTATGGTCCTGATCATCCTACTTCTGTAGAATGTGTAACATCAAGTTCCAATATTCCTGGTTCTACAGTTGGATCTCTGGAGCCTGATTGTGTTAAAATTGTATCTGGAAGTGATTCCGCACCACCTACTAAAATAAGGAAGTTAAATGGAGAGCGATCGGATCCAAAAAACCGTATGCTCCTGCAGAAACGACAGTTCTTTCATTCTCATAGAGTTCAGCCTATGGAGTTAGAGCAAGTATTATCGGATCGGGATAGCGAAGATGAAGTTGATGACGACATTGCAGATCTTGAAGATCGGAGGATGCTAGATGACTTTGTAGATGTTACCAAAGATGAAAAGCAGCTGATGCATCTCTGGAACTCATTTGTGCGAAAGCAAAGTGTGCTGGCGGATGGTCACGTTCCCTGGGCATGCGAAGCATTTTCAAAACTTCATGGACAGGAGCTAGTCTCCTCTCCGGCTCTTTTCTGGTGTTGGAGGTTTTTCATGATCAAACTTTGGAATCACGGTCTGCTTGATGCGGGCACAATGAATAGTTGCAATATCATACTCGACGGATACAAACACTAG

Protein Analysis

429

Amino Acids

49.49

Weight (kDa)

6.55

Isoelectric Point (pI)

50.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 24
AccII CGCG 1 cut(s) 669
AciI CCGC 4 cut(s) 44, 831, 1106, 1238
AclI AACGTT 1 cut(s) 381
AclWI GGATC 4 cut(s) 793, 869, 882, 969
AcsI RAATTY 1 cut(s) 13
AcuI CTGAAG 2 cut(s) 264, 273
AcvI CACGTG 1 cut(s) 264
AfaI GTAC 3 cut(s) 368, 522, 567
AfiI CCNNNNNNNGG 1 cut(s) 644
AflIII ACRYGT 2 cut(s) 228, 263
AgsI TTSAA 7 cut(s) 11, 208, 340, 446, 465, 1007, 1143
AjnI CCWGG 3 cut(s) 369, 769, 1121
AluBI AGCT 6 cut(s) 91, 294, 634, 664, 1060, 1162
AluI AGCT 6 cut(s) 91, 294, 634, 664, 1060, 1162
Alw21I GWGCWC 3 cut(s) 93, 118, 323
Alw26I GTCTC 2 cut(s) 407, 1171
AlwI GGATC 4 cut(s) 793, 869, 882, 969
AoxI GGCC 1 cut(s) 467
ApeKI GCWGC 2 cut(s) 664, 1057
ApoI RAATTY 1 cut(s) 13
Asp700I GAANNNNTTC 1 cut(s) 826
AspLEI GCGC 3 cut(s) 25, 174, 669
AspS9I GGNCC 1 cut(s) 719
AsuHPI GGTGA 4 cut(s) 305, 534, 608, 659
AvaII GGWCC 1 cut(s) 719
BaeGI GKGCMC 1 cut(s) 1244
BamHI GGATCC 1 cut(s) 874
BanII GRGCYC 1 cut(s) 93
BbrPI CACGTG 1 cut(s) 264
BbsI GAAGAC 1 cut(s) 261
Bbv12I GWGCWC 3 cut(s) 93, 118, 323
BbvI GCAGC 2 cut(s) 651, 1069
BccI CCATC 4 cut(s) 419, 587, 646, 1103
BciT130I CCWGG 3 cut(s) 371, 771, 1123
BciVI GTATCC 1 cut(s) 1268
BclI TGATCA 2 cut(s) 724, 1206
BcoDI GTCTC 2 cut(s) 407, 1171
BfaI CTAG 5 cut(s) 546, 551, 1022, 1163, 1285
BfmI CTRYAG 6 cut(s) 211, 417, 642, 738, 777, 896
BfuI GTATCC 1 cut(s) 1268
BglII AGATCT 2 cut(s) 407, 1000
BisI GCNGC 2 cut(s) 665, 1058
BlsI GCNGC 2 cut(s) 666, 1059
Bme1390I CCNGG 3 cut(s) 371, 771, 1123
Bme18I GGWCC 1 cut(s) 719
BmgT120I GGNCC 1 cut(s) 719
BmiI GGNNCC 2 cut(s) 795, 876
BmrFI CCNGG 3 cut(s) 371, 771, 1123
BmrI ACTGGG 1 cut(s) 201
BmsI GCATC 5 cut(s) 270, 1008, 1053, 1075, 1225
BmuI ACTGGG 1 cut(s) 201
BpiI GAAGAC 1 cut(s) 261
BplI GAGNNNNNCTC 4 cut(s) 524, 556, 1151, 1183
BpmI CTGGAG 2 cut(s) 381, 812
BsaAI YACGTR 1 cut(s) 264
BsaJI CCNNGG 3 cut(s) 609, 1121, 1122
Bsc4I CCNNNNNNNGG 1 cut(s) 644
Bse1I ACTGG 3 cut(s) 83, 196, 364
Bse3DI GCAATG 2 cut(s) 290, 993
BseBI CCWGG 3 cut(s) 371, 771, 1123
BseDI CCNNGG 3 cut(s) 609, 1121, 1122
BseGI GGATG 3 cut(s) 727, 1023, 1114
BseLI CCNNNNNNNGG 1 cut(s) 644
BseMI GCAATG 2 cut(s) 290, 993
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 3 cut(s) 83, 196, 364
BseRI GAGGAG 2 cut(s) 53, 1159
BseSI GKGCMC 1 cut(s) 1244
BseXI GCAGC 2 cut(s) 651, 1069
BsgI GTGCAG 1 cut(s) 104
Bsh1236I CGCG 1 cut(s) 669
Bsh1285I CGRYCG 1 cut(s) 872
BshFI GGCC 1 cut(s) 469
BsiEI CGRYCG 1 cut(s) 872
BsiHKAI GWGCWC 3 cut(s) 93, 118, 323
BsiSI CCGG 2 cut(s) 688, 1175
BslFI GGGAC 4 cut(s) 230, 252, 419, 588
BslI CCNNNNNNNGG 1 cut(s) 644
BsmAI GTCTC 2 cut(s) 407, 1171
BsmFI GGGAC 4 cut(s) 230, 252, 419, 588
BsnI GGCC 1 cut(s) 469
Bsp1286I GDGCHC 4 cut(s) 93, 118, 323, 1244
Bsp1407I TGTACA 2 cut(s) 520, 565
Bsp143I GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
BspACI CCGC 4 cut(s) 44, 831, 1106, 1238
BspANI GGCC 1 cut(s) 469
BspCNI CTCAG 1 cut(s) 403
BspFNI CGCG 1 cut(s) 669
BspHI TCATGA 1 cut(s) 1203
BspLI GGNNCC 2 cut(s) 795, 876
BspMAI CTGCAG 1 cut(s) 900
BspPI GGATC 4 cut(s) 793, 869, 882, 969
BspQI GCTCTTC 1 cut(s) 328
BsrDI GCAATG 2 cut(s) 290, 993
BsrGI TGTACA 2 cut(s) 520, 565
BsrI ACTGG 3 cut(s) 83, 196, 364
BssECI CCNNGG 3 cut(s) 609, 1121, 1122
BssMI GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
BssT1I CCWWGG 1 cut(s) 609
Bst2UI CCWGG 3 cut(s) 371, 771, 1123
Bst4CI ACNGT 6 cut(s) 418, 494, 781, 887, 909, 1226
Bst6I CTCTTC 2 cut(s) 51, 328
BstAPI GCANNNNNTGC 2 cut(s) 1063, 1099
BstAUI TGTACA 2 cut(s) 520, 565
BstBAI YACGTR 1 cut(s) 264
BstC8I GCNNGC 5 cut(s) 80, 292, 1104, 1129, 1240
BstDEI CTNAG 1 cut(s) 411
BstF5I GGATG 3 cut(s) 727, 1023, 1114
BstFNI CGCG 1 cut(s) 669
BstHHI GCGC 3 cut(s) 25, 174, 669
BstKTI GATC 9 cut(s) 410, 727, 788, 872, 877, 964, 1003, 1012, 1209
BstMAI GTCTC 2 cut(s) 407, 1171
BstMBI GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
BstMCI CGRYCG 1 cut(s) 872
BstMWI GCNNNNNNNGC 7 cut(s) 41, 88, 428, 697, 1063, 1099, 1133
BstNI CCWGG 3 cut(s) 371, 771, 1123
BstNSI RCATGY 2 cut(s) 515, 1131
BstSCI CCNGG 3 cut(s) 369, 769, 1121
BstSFI CTRYAG 6 cut(s) 211, 417, 642, 738, 777, 896
BstSLI GKGCMC 1 cut(s) 1244
BstUI CGCG 1 cut(s) 669
BstV1I GCAGC 2 cut(s) 651, 1069
BstV2I GAAGAC 1 cut(s) 261
BstX2I RGATCY 4 cut(s) 407, 785, 874, 1000
BstYI RGATCY 4 cut(s) 407, 785, 874, 1000
BsuI GTATCC 1 cut(s) 1268
BsuRI GGCC 1 cut(s) 469
BtsCI GGATG 3 cut(s) 727, 1023, 1114
Cac8I GCNNGC 5 cut(s) 80, 292, 1104, 1129, 1240
CciI TCATGA 1 cut(s) 1203
CfoI GCGC 3 cut(s) 25, 174, 669
Cfr13I GGNCC 1 cut(s) 719
CseI GACGC 1 cut(s) 658
Csp6I GTAC 3 cut(s) 367, 521, 566
CviAII CATG 8 cut(s) 329, 512, 569, 701, 707, 1128, 1151, 1204
CviQI GTAC 3 cut(s) 367, 521, 566
DdeI CTNAG 1 cut(s) 411
DpnI GATC 9 cut(s) 409, 726, 787, 871, 876, 963, 1002, 1011, 1208
DpnII GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
Eam1104I CTCTTC 2 cut(s) 51, 328
EarI CTCTTC 2 cut(s) 51, 328
EciI GGCGGA 1 cut(s) 1121
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 609
Eco24I GRGCYC 1 cut(s) 93
Eco32I GATATC 2 cut(s) 628, 685
Eco47I GGWCC 1 cut(s) 719
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 2 cut(s) 264, 273
Eco72I CACGTG 1 cut(s) 264
EcoICRI GAGCTC 1 cut(s) 91
EcoRII CCWGG 3 cut(s) 369, 769, 1121
EcoRV GATATC 2 cut(s) 628, 685
EcoT14I CCWWGG 1 cut(s) 609
EcoT22I ATGCAT 1 cut(s) 1068
EcoT38I GRGCYC 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 609
FaeI CATG 8 cut(s) 332, 515, 572, 704, 710, 1131, 1154, 1207
FalI AAGNNNNNCTT 2 cut(s) 48, 80
FaqI GGGAC 4 cut(s) 230, 252, 419, 588
FatI CATG 8 cut(s) 328, 511, 568, 700, 706, 1127, 1150, 1203
FauI CCCGC 1 cut(s) 1231
FbaI TGATCA 2 cut(s) 724, 1206
Fnu4HI GCNGC 2 cut(s) 665, 1058
FokI GGATG 3 cut(s) 714, 1030, 1121
FriOI GRGCYC 1 cut(s) 93
Fsp4HI GCNGC 2 cut(s) 665, 1058
FspAI RTGCGCAY 1 cut(s) 24
FspBI CTAG 5 cut(s) 546, 551, 1022, 1163, 1285
FspI TGCGCA 1 cut(s) 24
GlaI GCGC 3 cut(s) 24, 173, 668
GluI GCNGC 2 cut(s) 665, 1058
GsuI CTGGAG 2 cut(s) 381, 812
HaeIII GGCC 1 cut(s) 469
HapII CCGG 2 cut(s) 688, 1175
HgaI GACGC 1 cut(s) 658
HhaI GCGC 3 cut(s) 25, 174, 669
Hin1II CATG 8 cut(s) 332, 515, 572, 704, 710, 1131, 1154, 1207
Hin6I GCGC 3 cut(s) 23, 172, 667
HinP1I GCGC 3 cut(s) 23, 172, 667
HindIII AAGCTT 1 cut(s) 292
HinfI GANTC 4 cut(s) 61, 539, 827, 1219
HpaII CCGG 2 cut(s) 688, 1175
HphI GGTGA 4 cut(s) 305, 534, 608, 659
Hpy166II GTNNAC 1 cut(s) 379
Hpy188I TCNGA 4 cut(s) 412, 874, 961, 1014
Hpy188III TCNNGA 8 cut(s) 187, 722, 791, 819, 965, 1004, 1072, 1204
Hpy8I GTNNAC 1 cut(s) 379
Hpy99I CGWCG 2 cut(s) 674, 1274
HpyAV CCTTC 5 cut(s) 17, 113, 595, 646, 690
HpyCH4III ACNGT 6 cut(s) 418, 494, 781, 887, 909, 1226
HpyCH4IV ACGT 5 cut(s) 230, 263, 381, 478, 1116
HpyF10VI GCNNNNNNNGC 7 cut(s) 41, 88, 428, 697, 1063, 1099, 1133
HpyF3I CTNAG 1 cut(s) 411
HpySE526I ACGT 5 cut(s) 230, 263, 381, 478, 1116
Hsp92II CATG 8 cut(s) 332, 515, 572, 704, 710, 1131, 1154, 1207
HspAI GCGC 3 cut(s) 23, 172, 667
Ksp22I TGATCA 2 cut(s) 724, 1206
Kzo9I GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
LguI GCTCTTC 1 cut(s) 328
LmnI GCTCC 4 cut(s) 428, 793, 897, 1159
Lsp1109I GCAGC 2 cut(s) 651, 1069
LweI GCATC 5 cut(s) 270, 1008, 1053, 1075, 1225
MaeI CTAG 5 cut(s) 546, 551, 1022, 1163, 1285
MaeII ACGT 5 cut(s) 230, 263, 381, 478, 1116
MaeIII GTNAC 6 cut(s) 231, 247, 355, 748, 1039, 1112
MalI GATC 9 cut(s) 409, 726, 787, 871, 876, 963, 1002, 1011, 1208
MboI GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
MboII GAAGA 7 cut(s) 68, 266, 315, 445, 448, 986, 1019
MflI RGATCY 4 cut(s) 407, 785, 874, 1000
MhlI GDGCHC 4 cut(s) 93, 118, 323, 1244
MluCI AATT 4 cut(s) 13, 393, 524, 810
MlyI GAGTC 2 cut(s) 70, 533
MmeI TCCRAC 2 cut(s) 763, 1172
MnlI CCTC 7 cut(s) 31, 34, 174, 565, 1008, 1180, 1188
Mph1103I ATGCAT 1 cut(s) 1068
MroXI GAANNNNTTC 1 cut(s) 826
MseI TTAA 4 cut(s) 297, 516, 807, 857
MslI CAYNNNNRTG 2 cut(s) 516, 705
MspA1I CMGCKG 1 cut(s) 1060
MspI CCGG 2 cut(s) 688, 1175
MspR9I CCNGG 3 cut(s) 371, 771, 1123
MvaI CCWGG 3 cut(s) 371, 771, 1123
MvnI CGCG 1 cut(s) 669
MwoI GCNNNNNNNGC 7 cut(s) 41, 88, 428, 697, 1063, 1099, 1133
NdeII GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
NlaIII CATG 8 cut(s) 332, 515, 572, 704, 710, 1131, 1154, 1207
NlaIV GGNNCC 2 cut(s) 795, 876
NmuCI GTSAC 1 cut(s) 1112
NsbI TGCGCA 1 cut(s) 24
NsiI ATGCAT 1 cut(s) 1068
NspI RCATGY 2 cut(s) 515, 1131
PaeI GCATGC 1 cut(s) 1131
PagI TCATGA 1 cut(s) 1203
PasI CCCWGGG 1 cut(s) 1122
PciSI GCTCTTC 1 cut(s) 328
PdmI GAANNNNTTC 1 cut(s) 826
PfeI GAWTC 2 cut(s) 827, 1219
PkrI GCNGC 2 cut(s) 666, 1059
Ple19I CGATCG 1 cut(s) 872
PleI GAGTC 2 cut(s) 69, 533
PmaCI CACGTG 1 cut(s) 264
PmlI CACGTG 1 cut(s) 264
PpsI GAGTC 2 cut(s) 69, 533
Ppu21I YACGTR 1 cut(s) 264
Psp124BI GAGCTC 1 cut(s) 93
Psp1406I AACGTT 1 cut(s) 381
Psp6I CCWGG 3 cut(s) 369, 769, 1121
PspCI CACGTG 1 cut(s) 264
PspGI CCWGG 3 cut(s) 369, 769, 1121
PspN4I GGNNCC 2 cut(s) 795, 876
PspPI GGNCC 1 cut(s) 719
PstI CTGCAG 1 cut(s) 900
PsuI RGATCY 4 cut(s) 407, 785, 874, 1000
PvuI CGATCG 1 cut(s) 872
PvuII CAGCTG 1 cut(s) 1060
RsaI GTAC 3 cut(s) 368, 522, 567
RsaNI GTAC 3 cut(s) 367, 521, 566
RseI CAYNNNNRTG 2 cut(s) 516, 705
SacI GAGCTC 1 cut(s) 93
SapI GCTCTTC 1 cut(s) 328
SaqAI TTAA 4 cut(s) 297, 516, 807, 857
SatI GCNGC 2 cut(s) 665, 1058
Sau3AI GATC 9 cut(s) 407, 724, 785, 869, 874, 961, 1000, 1009, 1206
Sau96I GGNCC 1 cut(s) 719
SchI GAGTC 2 cut(s) 70, 533
ScrFI CCNGG 3 cut(s) 371, 771, 1123
SduI GDGCHC 4 cut(s) 93, 118, 323, 1244
SfaNI GCATC 5 cut(s) 270, 1008, 1053, 1075, 1225
SfcI CTRYAG 6 cut(s) 211, 417, 642, 738, 777, 896
SinI GGWCC 1 cut(s) 719
SmiMI CAYNNNNRTG 2 cut(s) 516, 705
SphI GCATGC 1 cut(s) 1131
Sse9I AATT 4 cut(s) 13, 393, 524, 810
SsiI CCGC 4 cut(s) 44, 831, 1106, 1238
SspI AATATT 2 cut(s) 204, 766
SspMI CTAG 5 cut(s) 546, 551, 1022, 1163, 1285
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 3 cut(s) 369, 769, 1121
StyI CCWWGG 1 cut(s) 609
TaaI ACNGT 6 cut(s) 418, 494, 781, 887, 909, 1226
TaiI ACGT 5 cut(s) 233, 266, 384, 481, 1119
TaqI TCGA 3 cut(s) 54, 672, 1269
TasI AATT 4 cut(s) 13, 393, 524, 810
TatI WGTACW 2 cut(s) 520, 565
TfiI GAWTC 2 cut(s) 827, 1219
Tru1I TTAA 4 cut(s) 297, 516, 807, 857
Tru9I TTAA 4 cut(s) 297, 516, 807, 857
TseFI GTSAC 1 cut(s) 1112
TseI GCWGC 2 cut(s) 664, 1057
Tsp45I GTSAC 1 cut(s) 1112
TspDTI ATGAA 9 cut(s) 519, 717, 723, 905, 993, 1065, 1139, 1192, 1262
TspGWI ACGGA 1 cut(s) 1287
VpaK11BI GGWCC 1 cut(s) 719
XapI RAATTY 1 cut(s) 13
XceI RCATGY 2 cut(s) 515, 1131
XmnI GAANNNNTTC 1 cut(s) 826
XspI CTAG 5 cut(s) 546, 551, 1022, 1163, 1285
Zsp2I ATGCAT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.