Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g01160 |
| prunus_persica | Prupe.5G086600_v2.0.a1 |
| pyrus_communis | pycom06g06790 |
| rosa_chinensis | RchiOBHm_Chr7g0199961 |
| rosa_laevigata | RLG00000003756 |
| rosa_roxburghii | Rroxscaffold_3G00256320 Rroxscaffold_7G00207590 |
| rosa_rugosa | Rorug07G0057400 Rorug07G0057500 |
| rosa_samantha | Rh7AG182700 Rh7BG185900 Rh7CG192500 Rh7DG185700 |
| rosa_wichuraiana | Rw7G016020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 170 |
| AcoI | YGGCCR | 2 cut(s) | 172, 300 |
| AfaI | GTAC | 1 cut(s) | 484 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 170 |
| AgsI | TTSAA | 3 cut(s) | 227, 278, 341 |
| AluBI | AGCT | 4 cut(s) | 41, 53, 61, 427 |
| AluI | AGCT | 4 cut(s) | 41, 53, 61, 427 |
| Alw21I | GWGCWC | 1 cut(s) | 96 |
| Alw26I | GTCTC | 2 cut(s) | 264, 377 |
| AoxI | GGCC | 3 cut(s) | 161, 172, 300 |
| ApeKI | GCWGC | 1 cut(s) | 427 |
| AspLEI | GCGC | 1 cut(s) | 183 |
| AsuHPI | GGTGA | 1 cut(s) | 230 |
| BalI | TGGCCA | 2 cut(s) | 174, 302 |
| BbsI | GAAGAC | 1 cut(s) | 295 |
| Bbv12I | GWGCWC | 1 cut(s) | 96 |
| BbvI | GCAGC | 1 cut(s) | 414 |
| BccI | CCATC | 3 cut(s) | 134, 139, 437 |
| BclI | TGATCA | 1 cut(s) | 370 |
| BcoDI | GTCTC | 2 cut(s) | 264, 377 |
| BfaI | CTAG | 1 cut(s) | 267 |
| BisI | GCNGC | 1 cut(s) | 428 |
| BlsI | GCNGC | 1 cut(s) | 429 |
| BmsI | GCATC | 2 cut(s) | 197, 323 |
| BpiI | GAAGAC | 1 cut(s) | 295 |
| BpuEI | CTTGAG | 2 cut(s) | 120, 332 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 170 |
| Bse1I | ACTGG | 2 cut(s) | 204, 480 |
| BseGI | GGATG | 2 cut(s) | 200, 448 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BseNI | ACTGG | 2 cut(s) | 204, 480 |
| BseXI | GCAGC | 1 cut(s) | 414 |
| BshFI | GGCC | 3 cut(s) | 163, 174, 302 |
| BsiHKAI | GWGCWC | 1 cut(s) | 96 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BsmAI | GTCTC | 2 cut(s) | 264, 377 |
| BsnI | GGCC | 3 cut(s) | 163, 174, 302 |
| Bsp1286I | GDGCHC | 1 cut(s) | 96 |
| Bsp143I | GATC | 4 cut(s) | 148, 258, 323, 370 |
| BspANI | GGCC | 3 cut(s) | 163, 174, 302 |
| BspHI | TCATGA | 1 cut(s) | 379 |
| BspQI | GCTCTTC | 1 cut(s) | 481 |
| BsrI | ACTGG | 2 cut(s) | 204, 480 |
| BssMI | GATC | 4 cut(s) | 148, 258, 323, 370 |
| Bst4CI | ACNGT | 2 cut(s) | 388, 516 |
| Bst6I | CTCTTC | 2 cut(s) | 324, 481 |
| BstC8I | GCNNGC | 1 cut(s) | 161 |
| BstF5I | GGATG | 2 cut(s) | 200, 448 |
| BstHHI | GCGC | 1 cut(s) | 183 |
| BstKTI | GATC | 4 cut(s) | 151, 261, 326, 373 |
| BstMAI | GTCTC | 2 cut(s) | 264, 377 |
| BstMBI | GATC | 4 cut(s) | 148, 258, 323, 370 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 180 |
| BstV1I | GCAGC | 1 cut(s) | 414 |
| BstV2I | GAAGAC | 1 cut(s) | 295 |
| BsuRI | GGCC | 3 cut(s) | 163, 174, 302 |
| BtsCI | GGATG | 2 cut(s) | 200, 448 |
| BtsIMutI | CAGTG | 1 cut(s) | 393 |
| Cac8I | GCNNGC | 1 cut(s) | 161 |
| CciI | TCATGA | 1 cut(s) | 379 |
| CfoI | GCGC | 1 cut(s) | 183 |
| Csp6I | GTAC | 1 cut(s) | 483 |
| CviAII | CATG | 4 cut(s) | 262, 374, 380, 471 |
| CviJI | RGCY | 8 cut(s) | 41, 53, 61, 163, 174, 302, 427, 448 |
| CviKI_1 | RGCY | 8 cut(s) | 41, 53, 61, 163, 174, 302, 427, 448 |
| CviQI | GTAC | 1 cut(s) | 483 |
| DpnI | GATC | 4 cut(s) | 150, 260, 325, 372 |
| DpnII | GATC | 4 cut(s) | 148, 258, 323, 370 |
| EaeI | YGGCCR | 2 cut(s) | 172, 300 |
| Eam1104I | CTCTTC | 2 cut(s) | 324, 481 |
| EarI | CTCTTC | 2 cut(s) | 324, 481 |
| EcoT22I | ATGCAT | 1 cut(s) | 316 |
| FaeI | CATG | 4 cut(s) | 265, 377, 383, 474 |
| FaiI | YATR | 9 cut(s) | 9, 263, 312, 365, 375, 381, 398, 432, 472 |
| FatI | CATG | 4 cut(s) | 261, 373, 379, 470 |
| FbaI | TGATCA | 1 cut(s) | 370 |
| Fnu4HI | GCNGC | 1 cut(s) | 428 |
| FokI | GGATG | 2 cut(s) | 187, 455 |
| Fsp4HI | GCNGC | 1 cut(s) | 428 |
| FspBI | CTAG | 1 cut(s) | 267 |
| GlaI | GCGC | 1 cut(s) | 182 |
| GluI | GCNGC | 1 cut(s) | 428 |
| HaeIII | GGCC | 3 cut(s) | 163, 174, 302 |
| HhaI | GCGC | 1 cut(s) | 183 |
| Hin1II | CATG | 4 cut(s) | 265, 377, 383, 474 |
| Hin6I | GCGC | 1 cut(s) | 181 |
| HinP1I | GCGC | 1 cut(s) | 181 |
| HindIII | AAGCTT | 1 cut(s) | 39 |
| HinfI | GANTC | 1 cut(s) | 127 |
| HphI | GGTGA | 1 cut(s) | 230 |
| Hpy188I | TCNGA | 1 cut(s) | 370 |
| Hpy188III | TCNNGA | 3 cut(s) | 137, 146, 380 |
| Hpy99I | CGWCG | 1 cut(s) | 516 |
| HpyAV | CCTTC | 2 cut(s) | 24, 89 |
| HpyCH4III | ACNGT | 2 cut(s) | 388, 516 |
| HpyCH4V | TGCA | 3 cut(s) | 159, 314, 430 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 180 |
| Hsp92II | CATG | 4 cut(s) | 265, 377, 383, 474 |
| HspAI | GCGC | 1 cut(s) | 181 |
| Ksp22I | TGATCA | 1 cut(s) | 370 |
| Kzo9I | GATC | 4 cut(s) | 148, 258, 323, 370 |
| LguI | GCTCTTC | 1 cut(s) | 481 |
| LpnPI | CCDG | 7 cut(s) | 88, 145, 156, 169, 188, 217, 493 |
| Lsp1109I | GCAGC | 1 cut(s) | 414 |
| LweI | GCATC | 2 cut(s) | 197, 323 |
| MaeI | CTAG | 1 cut(s) | 267 |
| MalI | GATC | 4 cut(s) | 150, 260, 325, 372 |
| MboI | GATC | 4 cut(s) | 148, 258, 323, 370 |
| MboII | GAAGA | 6 cut(s) | 189, 239, 268, 300, 311, 468 |
| MhlI | GDGCHC | 1 cut(s) | 96 |
| MlsI | TGGCCA | 2 cut(s) | 174, 302 |
| MluCI | AATT | 3 cut(s) | 29, 222, 391 |
| MluNI | TGGCCA | 2 cut(s) | 174, 302 |
| MlyI | GAGTC | 1 cut(s) | 121 |
| MnlI | CCTC | 2 cut(s) | 351, 432 |
| Mox20I | TGGCCA | 2 cut(s) | 174, 302 |
| Mph1103I | ATGCAT | 1 cut(s) | 316 |
| MscI | TGGCCA | 2 cut(s) | 174, 302 |
| MslI | CAYNNNNRTG | 1 cut(s) | 378 |
| Msp20I | TGGCCA | 2 cut(s) | 174, 302 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 180 |
| NdeII | GATC | 4 cut(s) | 148, 258, 323, 370 |
| NlaIII | CATG | 4 cut(s) | 265, 377, 383, 474 |
| NsiI | ATGCAT | 1 cut(s) | 316 |
| PagI | TCATGA | 1 cut(s) | 379 |
| PciSI | GCTCTTC | 1 cut(s) | 481 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 170 |
| PkrI | GCNGC | 1 cut(s) | 429 |
| PleI | GAGTC | 1 cut(s) | 121 |
| PpsI | GAGTC | 1 cut(s) | 121 |
| RsaI | GTAC | 1 cut(s) | 484 |
| RsaNI | GTAC | 1 cut(s) | 483 |
| RseI | CAYNNNNRTG | 1 cut(s) | 378 |
| SapI | GCTCTTC | 1 cut(s) | 481 |
| SatI | GCNGC | 1 cut(s) | 428 |
| Sau3AI | GATC | 4 cut(s) | 148, 258, 323, 370 |
| SchI | GAGTC | 1 cut(s) | 121 |
| SduI | GDGCHC | 1 cut(s) | 96 |
| SetI | ASST | 6 cut(s) | 43, 55, 63, 362, 429, 458 |
| SfaNI | GCATC | 2 cut(s) | 197, 323 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 378 |
| SmlI | CTYRAG | 2 cut(s) | 135, 347 |
| SmoI | CTYRAG | 2 cut(s) | 135, 347 |
| Sse9I | AATT | 3 cut(s) | 29, 222, 391 |
| SspMI | CTAG | 1 cut(s) | 267 |
| TaaI | ACNGT | 2 cut(s) | 388, 516 |
| TaqI | TCGA | 1 cut(s) | 322 |
| TasI | AATT | 3 cut(s) | 29, 222, 391 |
| TatI | WGTACW | 1 cut(s) | 482 |
| TscAI | CASTG | 1 cut(s) | 393 |
| TseI | GCWGC | 1 cut(s) | 427 |
| TspDTI | ATGAA | 3 cut(s) | 189, 368, 459 |
| TspRI | CASTG | 1 cut(s) | 393 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 170 |
| XspI | CTAG | 1 cut(s) | 267 |
| Zsp2I | ATGCAT | 1 cut(s) | 316 |