Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0014495

Physical Location & Seq

Genomic Coordinates Reverse (-)

10666795 .. 10670509

Gene Structure 3715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G098100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 753 bp

ATGAAGCTGAAAGTATACGTTGATCGAATGTCACAACCGTCACGTGCAATTTTAATCTTCCTCAAGGCAAATGGAATAGAGTTCGAGGAGGTGAAAATAGACATAGCCAAACGTCAACACAAATCTCCTGAATTCAAAAAAATAAACCCTATGGGACAAGTTCCTGCTATTTCTGATGGGAGATTTAATCTGTTTGAAAGTCATGCAATTCTTACCTATCTTGCTTGTGCATTTCCTGGAGTAGCAGATTCTTGGTATCCTTCTGATCTTTTTGCGAGAGCTAAAATCAACTCAGTGTTGGATTGGCATCACTCTAACTTACGCCGTGGCTCAGCGACATTTGTTCTTCATACTGTACTAGCACCTGTGTTTGGACTTCCATCAAATCCACAAGCAGCTGCTGAAGCTGAGACACTTTTATCGTCCTCTTTGTCAACAATAGAATCCATTTGGCTCAAGGGAAATGGAAAATTTTTGCTGGGTGGCTTCCGACCATCCATAGCAGATCTCAGCTTGGTTTGTGAAATCATGCAACTTGAGCTTTTGGAGGAGAAGGATCGCAGTCGTATACTTGATCCGCACACGAAAGTTCTACAGTGGATTGAAAATACTAAAAATGCAACAAGACCTCACTTCTACGAAGTACATGATGTCCTCTTCAGAGCCAAAACAAGATTCCAGGAGCAGCGGTTGAAGAGGGCAAGCAATAAGACTGATTCCAGCGATAGGTCGAAATTGCCTTCAAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C_2 GST_N

Protein Analysis

251

Amino Acids

28.36

Weight (kDa)

9.49

Isoelectric Point (pI)

54.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014495)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41210
fragaria_vesca	FvH4_5g02100
malus_domestica	MD06G1081000.v1.1
prunus_persica	Prupe.5G098100_v2.0.a1
pyrus_communis	pycom06g07800
rosa_chinensis	RchiOBHm_Chr7g0198031 RchiOBHm_Chr7g0198101
rosa_laevigata	RLG00000003889 RLG00000003891
rosa_multiflora	Rmu_sc0000221.1_g000031
rosa_roxburghii	Rroxscaffold_3G00258000
rosa_rugosa	Rorug07G0045600
rosa_samantha	Rh7AG168900 Rh7BG172000 Rh7CG178500 Rh7DG171300
rosa_wichuraiana	Rw7G014770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	15, 568
AciI	CCGC	2 cut(s)	578, 688
AclWI	GGATC	2 cut(s)	564, 569
AcsI	RAATTY	2 cut(s)	131, 470
AcuI	CTGAAG	2 cut(s)	423, 643
AcvI	CACGTG	1 cut(s)	44
AfaI	GTAC	2 cut(s)	357, 645
AfiI	CCNNNNNNNGG	2 cut(s)	371, 726
AgsI	TTSAA	5 cut(s)	136, 197, 605, 694, 744
AjnI	CCWGG	2 cut(s)	235, 678
AjuI	GAANNNNNNNTTGG	2 cut(s)	659, 691
AluBI	AGCT	6 cut(s)	7, 281, 398, 407, 513, 541
AluI	AGCT	6 cut(s)	7, 281, 398, 407, 513, 541
Alw26I	GTCTC	1 cut(s)	404
AlwI	GGATC	2 cut(s)	564, 569
AlwNI	CAGNNNCTG	1 cut(s)	401
ApeKI	GCWGC	3 cut(s)	395, 398, 685
ApoI	RAATTY	2 cut(s)	131, 470
AsuHPI	GGTGA	1 cut(s)	103
BbrPI	CACGTG	1 cut(s)	44
BbvI	GCAGC	3 cut(s)	385, 407, 697
BccI	CCATC	3 cut(s)	170, 388, 502
BceAI	ACGGC	1 cut(s)	309
BciT130I	CCWGG	2 cut(s)	237, 680
BciVI	GTATCC	1 cut(s)	267
BcoDI	GTCTC	1 cut(s)	404
BfaI	CTAG	1 cut(s)	359
BfmI	CTRYAG	1 cut(s)	593
BfuI	GTATCC	1 cut(s)	267
BglII	AGATCT	1 cut(s)	505
BisI	GCNGC	3 cut(s)	396, 399, 686
BlpI	GCTNAGC	1 cut(s)	331
BlsI	GCNGC	3 cut(s)	397, 400, 687
Bme1390I	CCNGG	2 cut(s)	237, 680
BmrFI	CCNGG	2 cut(s)	237, 680
BmsI	GCATC	1 cut(s)	316
BpmI	CTGGAG	1 cut(s)	258
Bpu1102I	GCTNAGC	1 cut(s)	331
BpuEI	CTTGAG	3 cut(s)	47, 440, 557
BsaAI	YACGTR	1 cut(s)	44
BsaBI	GATNNNNATC	1 cut(s)	306
BsaJI	CCNNGG	1 cut(s)	325
BsaXI	ACNNNNNCTCC	2 cut(s)	674, 704
Bsc4I	CCNNNNNNNGG	2 cut(s)	371, 726
Bse8I	GATNNNNATC	1 cut(s)	306
BseBI	CCWGG	2 cut(s)	237, 680
BseDI	CCNNGG	1 cut(s)	325
BseGI	GGATG	1 cut(s)	494
BseJI	GATNNNNATC	1 cut(s)	306
BseLI	CCNNNNNNNGG	2 cut(s)	371, 726
BseMII	CTCAG	4 cut(s)	306, 345, 399, 523
BseRI	GAGGAG	2 cut(s)	101, 563
BseXI	GCAGC	3 cut(s)	385, 407, 697
BseYI	CCCAGC	1 cut(s)	478
BslFI	GGGAC	1 cut(s)	168
BslI	CCNNNNNNNGG	2 cut(s)	371, 726
BsmAI	GTCTC	1 cut(s)	404
BsmFI	GGGAC	1 cut(s)	168
Bsp143I	GATC	5 cut(s)	22, 265, 505, 556, 574
Bsp1720I	GCTNAGC	1 cut(s)	331
BspACI	CCGC	2 cut(s)	578, 688
BspCNI	CTCAG	4 cut(s)	305, 344, 400, 522
BspPI	GGATC	2 cut(s)	564, 569
BssECI	CCNNGG	1 cut(s)	325
BssMI	GATC	5 cut(s)	22, 265, 505, 556, 574
BssNAI	GTATAC	2 cut(s)	16, 569
Bst1107I	GTATAC	2 cut(s)	16, 569
Bst2UI	CCWGG	2 cut(s)	237, 680
Bst4CI	ACNGT	3 cut(s)	39, 355, 597
Bst6I	CTCTTC	2 cut(s)	662, 689
BstBAI	YACGTR	1 cut(s)	44
BstC8I	GCNNGC	1 cut(s)	703
BstDEI	CTNAG	4 cut(s)	292, 331, 408, 509
BstDSI	CCRYGG	1 cut(s)	325
BstF5I	GGATG	1 cut(s)	494
BstKTI	GATC	5 cut(s)	25, 268, 508, 559, 577
BstMAI	GTCTC	1 cut(s)	404
BstMBI	GATC	5 cut(s)	22, 265, 505, 556, 574
BstMWI	GCNNNNNNNGC	2 cut(s)	404, 538
BstNI	CCWGG	2 cut(s)	237, 680
BstSCI	CCNGG	2 cut(s)	235, 678
BstSFI	CTRYAG	1 cut(s)	593
BstV1I	GCAGC	3 cut(s)	385, 407, 697
BstX2I	RGATCY	1 cut(s)	505
BstYI	RGATCY	1 cut(s)	505
BstZ17I	GTATAC	2 cut(s)	16, 569
BsuI	GTATCC	1 cut(s)	267
BtgI	CCRYGG	1 cut(s)	325
BtsCI	GGATG	1 cut(s)	494
BtsIMutI	CAGTG	2 cut(s)	300, 602
Cac8I	GCNNGC	1 cut(s)	703
CaiI	CAGNNNCTG	1 cut(s)	401
Csp6I	GTAC	2 cut(s)	356, 644
CviAII	CATG	3 cut(s)	203, 529, 647
CviQI	GTAC	2 cut(s)	356, 644
DdeI	CTNAG	4 cut(s)	292, 331, 408, 509
DpnI	GATC	5 cut(s)	24, 267, 507, 558, 576
DpnII	GATC	5 cut(s)	22, 265, 505, 556, 574
Eam1104I	CTCTTC	2 cut(s)	662, 689
EarI	CTCTTC	2 cut(s)	662, 689
Eco57I	CTGAAG	2 cut(s)	423, 643
Eco72I	CACGTG	1 cut(s)	44
EcoRI	GAATTC	1 cut(s)	131
EcoRII	CCWGG	2 cut(s)	235, 678
FaeI	CATG	3 cut(s)	206, 532, 650
FaiI	YATR	9 cut(s)	16, 104, 152, 204, 351, 500, 530, 569, 648
FaqI	GGGAC	1 cut(s)	168
FatI	CATG	3 cut(s)	202, 528, 646
FblI	GTMKAC	2 cut(s)	15, 568
Fnu4HI	GCNGC	3 cut(s)	396, 399, 686
FokI	GGATG	1 cut(s)	481
Fsp4HI	GCNGC	3 cut(s)	396, 399, 686
FspBI	CTAG	1 cut(s)	359
GluI	GCNGC	3 cut(s)	396, 399, 686
GsaI	CCCAGC	1 cut(s)	482
GsuI	CTGGAG	1 cut(s)	258
Hin1II	CATG	3 cut(s)	206, 532, 650
HincII	GTYRAC	2 cut(s)	116, 435
HindII	GTYRAC	2 cut(s)	116, 435
HinfI	GANTC	4 cut(s)	248, 443, 675, 716
HphI	GGTGA	1 cut(s)	103
Hpy166II	GTNNAC	4 cut(s)	16, 116, 435, 569
Hpy188I	TCNGA	4 cut(s)	175, 265, 491, 662
Hpy188III	TCNNGA	1 cut(s)	128
Hpy8I	GTNNAC	4 cut(s)	16, 116, 435, 569
HpyAV	CCTTC	3 cut(s)	270, 547, 750
HpyCH4III	ACNGT	3 cut(s)	39, 355, 597
HpyCH4IV	ACGT	3 cut(s)	18, 43, 112
HpyCH4V	TGCA	5 cut(s)	47, 206, 230, 532, 620
HpyF10VI	GCNNNNNNNGC	2 cut(s)	404, 538
HpyF3I	CTNAG	4 cut(s)	292, 331, 408, 509
HpySE526I	ACGT	3 cut(s)	18, 43, 112
Hsp92II	CATG	3 cut(s)	206, 532, 650
Kzo9I	GATC	5 cut(s)	22, 265, 505, 556, 574
LmnI	GCTCC	1 cut(s)	682
LpnPI	CCDG	9 cut(s)	141, 177, 222, 249, 378, 464, 665, 692, 733
Lsp1109I	GCAGC	3 cut(s)	385, 407, 697
LweI	GCATC	1 cut(s)	316
MaeI	CTAG	1 cut(s)	359
MaeII	ACGT	3 cut(s)	18, 43, 112
MaeIII	GTNAC	2 cut(s)	30, 39
MalI	GATC	5 cut(s)	24, 267, 507, 558, 576
MboI	GATC	5 cut(s)	22, 265, 505, 556, 574
MboII	GAAGA	4 cut(s)	49, 338, 649, 706
MflI	RGATCY	1 cut(s)	505
MluCI	AATT	5 cut(s)	48, 131, 207, 470, 734
MmeI	TCCRAC	2 cut(s)	279, 514
MnlI	CCTC	8 cut(s)	71, 79, 82, 436, 541, 639, 665, 690
MseI	TTAA	2 cut(s)	53, 186
MspA1I	CMGCKG	2 cut(s)	398, 688
MspR9I	CCNGG	2 cut(s)	237, 680
MvaI	CCWGG	2 cut(s)	237, 680
MwoI	GCNNNNNNNGC	2 cut(s)	404, 538
NdeII	GATC	5 cut(s)	22, 265, 505, 556, 574
NlaIII	CATG	3 cut(s)	206, 532, 650
NmuCI	GTSAC	2 cut(s)	30, 39
PfeI	GAWTC	4 cut(s)	248, 443, 675, 716
PfoI	TCCNGGA	2 cut(s)	235, 678
PkrI	GCNGC	3 cut(s)	397, 400, 687
PmaCI	CACGTG	1 cut(s)	44
PmlI	CACGTG	1 cut(s)	44
Ppu21I	YACGTR	1 cut(s)	44
Psp6I	CCWGG	2 cut(s)	235, 678
PspCI	CACGTG	1 cut(s)	44
PspFI	CCCAGC	1 cut(s)	478
PspGI	CCWGG	2 cut(s)	235, 678
PstNI	CAGNNNCTG	1 cut(s)	401
PsuI	RGATCY	1 cut(s)	505
PvuII	CAGCTG	1 cut(s)	398
RsaI	GTAC	2 cut(s)	357, 645
RsaNI	GTAC	2 cut(s)	356, 644
SaqAI	TTAA	2 cut(s)	53, 186
SatI	GCNGC	3 cut(s)	396, 399, 686
Sau3AI	GATC	5 cut(s)	22, 265, 505, 556, 574
ScrFI	CCNGG	2 cut(s)	237, 680
SfaNI	GCATC	1 cut(s)	316
SfcI	CTRYAG	1 cut(s)	593
SmlI	CTYRAG	3 cut(s)	62, 455, 536
SmoI	CTYRAG	3 cut(s)	62, 455, 536
Sse9I	AATT	5 cut(s)	48, 131, 207, 470, 734
SsiI	CCGC	2 cut(s)	578, 688
SspMI	CTAG	1 cut(s)	359
StyD4I	CCNGG	2 cut(s)	235, 678
TaaI	ACNGT	3 cut(s)	39, 355, 597
TaiI	ACGT	3 cut(s)	21, 46, 115
TaqI	TCGA	3 cut(s)	25, 84, 731
TasI	AATT	5 cut(s)	48, 131, 207, 470, 734
TatI	WGTACW	2 cut(s)	355, 643
TfiI	GAWTC	4 cut(s)	248, 443, 675, 716
Tru1I	TTAA	2 cut(s)	53, 186
Tru9I	TTAA	2 cut(s)	53, 186
TscAI	CASTG	2 cut(s)	300, 602
TseFI	GTSAC	2 cut(s)	30, 39
TseI	GCWGC	3 cut(s)	395, 398, 685
Tsp45I	GTSAC	2 cut(s)	30, 39
TspDTI	ATGAA	2 cut(s)	17, 338
TspRI	CASTG	2 cut(s)	300, 602
XapI	RAATTY	2 cut(s)	131, 470
XmiI	GTMKAC	2 cut(s)	15, 568
XspI	CTAG	1 cut(s)	359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.