RchiOBHm_Chr7g0198101

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
15831423 .. 15833492
2070 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17723

Sequence Viewer

Length: 600 bp
ATGGGACAAGTTCCCGCTATTGCTGATGGCAGCTTTAATCTGTTTGAGAGTCATGCAATTCTTGTCTATCTTGCTTGTGCGTTTCCTGGAGTAGCAGATCACTGGTATCCTGCTGATCTTTTCAGGAGAGCTACAATCAACTCAGTGTTGGATTGGCACCACTCTAACTTACGCCATGGTGCATCAACATATGTTCTAAATACTCTACTTGCACCTTTTCTTGGACTTCAATTGAATCCACAAGCAGCTGCTGACGCTGAGAAACTTTTGTCCTCCTCTTTGTCAAAAATAGAGTCTATTTGGCTCAAAAGGAATGGAAAGTTCTTGTTGGGTGGCTTTCAACCATCCATAGCAGATCTCAGCCTGGTTTGTGAAATTATGCAACTTGAGCTTTTGGACGAGAACGACCGCATTCGGATACTTGGCCCGCACAAGAAAGTTCTAGAGTGGATTGAGAATACAAAAAATGCGACGAGACCTCACTTTGAAGAAGTACATCAAGTGCTCTACAGAGCCAAAACGAGATTTCAAGAGCAGCGGTCGATGGGAGCAAACAACACTAATTCGAGCAAAAGATTGGGTTTGCCTTCAAAGATGTGA

Protein Analysis

199

Amino Acids

22.38

Weight (kDa)

8.57

Isoelectric Point (pI)

45.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014495)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G41210
fragaria_vesca FvH4_5g02100
malus_domestica MD06G1081000.v1.1
prunus_persica Prupe.5G098100_v2.0.a1
pyrus_communis pycom06g07800
rosa_chinensis RchiOBHm_Chr7g0198031 RchiOBHm_Chr7g0198101
rosa_laevigata RLG00000003889 RLG00000003891
rosa_multiflora Rmu_sc0000221.1_g000031
rosa_roxburghii Rroxscaffold_3G00258000
rosa_rugosa Rorug07G0045600
rosa_samantha Rh7AG168900 Rh7BG172000 Rh7CG178500 Rh7DG171300
rosa_wichuraiana Rw7G014770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 156
AciI CCGC 4 cut(s) 15, 409, 428, 538
AfaI GTAC 1 cut(s) 495
AfiI CCNNNNNNNGG 1 cut(s) 221
AgsI TTSAA 6 cut(s) 230, 235, 341, 488, 530, 591
AjnI CCWGG 2 cut(s) 85, 363
AluBI AGCT 4 cut(s) 33, 131, 248, 391
AluI AGCT 4 cut(s) 33, 131, 248, 391
Alw21I GWGCWC 1 cut(s) 507
Alw26I GTCTC 1 cut(s) 469
AlwNI CAGNNNCTG 1 cut(s) 251
AoxI GGCC 1 cut(s) 424
ApeKI GCWGC 4 cut(s) 30, 245, 248, 535
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
AspS9I GGNCC 1 cut(s) 425
BanI GGYRCC 1 cut(s) 156
Bbv12I GWGCWC 1 cut(s) 507
BbvI GCAGC 4 cut(s) 42, 235, 257, 547
BccI CCATC 3 cut(s) 20, 352, 538
BciT130I CCWGG 2 cut(s) 87, 365
BciVI GTATCC 2 cut(s) 117, 411
BcoDI GTCTC 1 cut(s) 469
BfaI CTAG 1 cut(s) 443
BfmI CTRYAG 1 cut(s) 508
BfuI GTATCC 2 cut(s) 117, 411
BglII AGATCT 1 cut(s) 355
BisI GCNGC 4 cut(s) 31, 246, 249, 536
BlsI GCNGC 4 cut(s) 32, 247, 250, 537
Bme1390I CCNGG 2 cut(s) 87, 365
BmgT120I GGNCC 1 cut(s) 425
BmiI GGNNCC 1 cut(s) 158
BmrFI CCNGG 2 cut(s) 87, 365
BmsI GCATC 1 cut(s) 191
BpmI CTGGAG 1 cut(s) 108
BpuEI CTTGAG 1 cut(s) 407
BsaI GGTCTC 1 cut(s) 469
BsaJI CCNNGG 1 cut(s) 175
Bsc4I CCNNNNNNNGG 1 cut(s) 221
Bse1I ACTGG 1 cut(s) 107
BseBI CCWGG 2 cut(s) 87, 365
BseDI CCNNGG 1 cut(s) 175
BseGI GGATG 1 cut(s) 344
BseLI CCNNNNNNNGG 1 cut(s) 221
BseMII CTCAG 3 cut(s) 156, 249, 373
BseNI ACTGG 1 cut(s) 107
BseRI GAGGAG 1 cut(s) 265
BseXI GCAGC 4 cut(s) 42, 235, 257, 547
Bsh1285I CGRYCG 2 cut(s) 409, 542
BshFI GGCC 1 cut(s) 426
BshNI GGYRCC 1 cut(s) 156
BsiEI CGRYCG 2 cut(s) 409, 542
BsiHKAI GWGCWC 1 cut(s) 507
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 1 cut(s) 221
BsmAI GTCTC 1 cut(s) 469
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 1 cut(s) 411
BsnI GGCC 1 cut(s) 426
Bso31I GGTCTC 1 cut(s) 469
Bsp1286I GDGCHC 1 cut(s) 507
Bsp143I GATC 3 cut(s) 97, 115, 355
Bsp19I CCATGG 1 cut(s) 175
BspACI CCGC 4 cut(s) 15, 409, 428, 538
BspANI GGCC 1 cut(s) 426
BspCNI CTCAG 3 cut(s) 155, 250, 372
BspLI GGNNCC 1 cut(s) 158
BspT107I GGYRCC 1 cut(s) 156
BspTNI GGTCTC 1 cut(s) 469
BsrI ACTGG 1 cut(s) 107
BssECI CCNNGG 1 cut(s) 175
BssMI GATC 3 cut(s) 97, 115, 355
BssT1I CCWWGG 1 cut(s) 175
Bst2UI CCWGG 2 cut(s) 87, 365
BstC8I GCNNGC 1 cut(s) 428
BstDEI CTNAG 3 cut(s) 142, 258, 359
BstDSI CCRYGG 1 cut(s) 175
BstF5I GGATG 1 cut(s) 344
BstKTI GATC 3 cut(s) 100, 118, 358
BstMAI GTCTC 1 cut(s) 469
BstMBI GATC 3 cut(s) 97, 115, 355
BstMCI CGRYCG 2 cut(s) 409, 542
BstMWI GCNNNNNNNGC 2 cut(s) 254, 388
BstNI CCWGG 2 cut(s) 87, 365
BstSCI CCNGG 2 cut(s) 85, 363
BstSFI CTRYAG 1 cut(s) 508
BstV1I GCAGC 4 cut(s) 42, 235, 257, 547
BstX2I RGATCY 1 cut(s) 355
BstYI RGATCY 1 cut(s) 355
BsuI GTATCC 2 cut(s) 117, 411
BsuRI GGCC 1 cut(s) 426
BtgI CCRYGG 1 cut(s) 175
BtsCI GGATG 1 cut(s) 344
BtsIMutI CAGTG 2 cut(s) 100, 150
Cac8I GCNNGC 1 cut(s) 428
CaiI CAGNNNCTG 1 cut(s) 251
Cfr13I GGNCC 1 cut(s) 425
CseI GACGC 1 cut(s) 263
Csp6I GTAC 1 cut(s) 494
CviAII CATG 2 cut(s) 53, 176
CviJI RGCY 9 cut(s) 33, 131, 248, 304, 336, 363, 391, 426, 515
CviKI_1 RGCY 9 cut(s) 33, 131, 248, 304, 336, 363, 391, 426, 515
CviQI GTAC 1 cut(s) 494
DdeI CTNAG 3 cut(s) 142, 258, 359
DpnI GATC 3 cut(s) 99, 117, 357
DpnII GATC 3 cut(s) 97, 115, 355
Eco130I CCWWGG 1 cut(s) 175
Eco31I GGTCTC 1 cut(s) 469
EcoRII CCWGG 2 cut(s) 85, 363
EcoT14I CCWWGG 1 cut(s) 175
ErhI CCWWGG 1 cut(s) 175
FaeI CATG 2 cut(s) 56, 179
FaiI YATR 6 cut(s) 54, 177, 190, 192, 350, 380
FaqI GGGAC 1 cut(s) 18
FatI CATG 2 cut(s) 52, 175
FauI CCCGC 2 cut(s) 22, 435
FauNDI CATATG 1 cut(s) 190
Fnu4HI GCNGC 4 cut(s) 31, 246, 249, 536
FokI GGATG 1 cut(s) 331
Fsp4HI GCNGC 4 cut(s) 31, 246, 249, 536
FspBI CTAG 1 cut(s) 443
GluI GCNGC 4 cut(s) 31, 246, 249, 536
GsuI CTGGAG 1 cut(s) 108
HaeIII GGCC 1 cut(s) 426
HgaI GACGC 1 cut(s) 263
Hin1II CATG 2 cut(s) 56, 179
HinfI GANTC 3 cut(s) 49, 235, 293
Hpy188I TCNGA 1 cut(s) 417
Hpy188III TCNNGA 3 cut(s) 124, 443, 530
Hpy99I CGWCG 1 cut(s) 475
HpyAV CCTTC 1 cut(s) 597
HpyCH4V TGCA 4 cut(s) 56, 182, 212, 382
HpyF10VI GCNNNNNNNGC 2 cut(s) 254, 388
HpyF3I CTNAG 3 cut(s) 142, 258, 359
Hsp92II CATG 2 cut(s) 56, 179
Kzo9I GATC 3 cut(s) 97, 115, 355
LmnI GCTCC 1 cut(s) 548
LpnPI CCDG 7 cut(s) 72, 88, 99, 109, 123, 350, 377
Lsp1109I GCAGC 4 cut(s) 42, 235, 257, 547
LweI GCATC 1 cut(s) 191
MaeI CTAG 1 cut(s) 443
MalI GATC 3 cut(s) 99, 117, 357
MboI GATC 3 cut(s) 97, 115, 355
MboII GAAGA 1 cut(s) 500
MfeI CAATTG 1 cut(s) 230
MflI RGATCY 1 cut(s) 355
MhlI GDGCHC 1 cut(s) 507
MluCI AATT 4 cut(s) 57, 230, 375, 562
MlyI GAGTC 2 cut(s) 58, 302
MmeI TCCRAC 1 cut(s) 129
MnlI CCTC 3 cut(s) 283, 286, 489
MseI TTAA 1 cut(s) 36
MspA1I CMGCKG 2 cut(s) 248, 538
MspR9I CCNGG 2 cut(s) 87, 365
MunI CAATTG 1 cut(s) 230
Mva1269I GAATGC 1 cut(s) 411
MvaI CCWGG 2 cut(s) 87, 365
MwoI GCNNNNNNNGC 2 cut(s) 254, 388
NcoI CCATGG 1 cut(s) 175
NdeI CATATG 1 cut(s) 190
NdeII GATC 3 cut(s) 97, 115, 355
NlaIII CATG 2 cut(s) 56, 179
NlaIV GGNNCC 1 cut(s) 158
PctI GAATGC 1 cut(s) 411
PfeI GAWTC 1 cut(s) 235
PfoI TCCNGGA 1 cut(s) 85
PkrI GCNGC 4 cut(s) 32, 247, 250, 537
PleI GAGTC 2 cut(s) 57, 301
PpsI GAGTC 2 cut(s) 57, 301
Psp6I CCWGG 2 cut(s) 85, 363
PspGI CCWGG 2 cut(s) 85, 363
PspN4I GGNNCC 1 cut(s) 158
PspPI GGNCC 1 cut(s) 425
PstNI CAGNNNCTG 1 cut(s) 251
PsuI RGATCY 1 cut(s) 355
PvuII CAGCTG 1 cut(s) 248
RsaI GTAC 1 cut(s) 495
RsaNI GTAC 1 cut(s) 494
SaqAI TTAA 1 cut(s) 36
SatI GCNGC 4 cut(s) 31, 246, 249, 536
Sau3AI GATC 3 cut(s) 97, 115, 355
Sau96I GGNCC 1 cut(s) 425
SchI GAGTC 2 cut(s) 58, 302
ScrFI CCNGG 2 cut(s) 87, 365
SduI GDGCHC 1 cut(s) 507
SetI ASST 6 cut(s) 35, 133, 217, 250, 393, 481
SfaNI GCATC 1 cut(s) 191
SfcI CTRYAG 1 cut(s) 508
SmlI CTYRAG 1 cut(s) 386
SmoI CTYRAG 1 cut(s) 386
Sse9I AATT 4 cut(s) 57, 230, 375, 562
SsiI CCGC 4 cut(s) 15, 409, 428, 538
SspMI CTAG 1 cut(s) 443
StyD4I CCNGG 2 cut(s) 85, 363
StyI CCWWGG 1 cut(s) 175
TaqI TCGA 2 cut(s) 542, 566
TasI AATT 4 cut(s) 57, 230, 375, 562
TatI WGTACW 1 cut(s) 493
TfiI GAWTC 1 cut(s) 235
Tru1I TTAA 1 cut(s) 36
Tru9I TTAA 1 cut(s) 36
TscAI CASTG 2 cut(s) 107, 150
TseI GCWGC 4 cut(s) 30, 245, 248, 535
TspRI CASTG 2 cut(s) 107, 150
XbaI TCTAGA 1 cut(s) 442
XspI CTAG 1 cut(s) 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.