Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011031

Physical Location & Seq

Genomic Coordinates Forward (+)

11270759 .. 11272245

Gene Structure 1487 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G106700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 945 bp

ATGGAGAACTGGGATTTGCAAGCTGTGGTGAGAGGATGCAATACCACTGCCAATATTGATGAAGCCATGGAGAACTCTCAAATACCATATTGCTTTGCTCCATTAAGCATTGAAGAAGAAGATGACTTTTTCCATGCTTTGCCTCAGCTGTTTGAAGCCACAGCAGCTTTAGATGAATTGGAGGAGCTTTACAAGCCATTCTATCCAGTTTTGCAACCCTCAGCCCCACCAGTCATTCTTGCCTCCTCCATGTCTGTTCCCCAAGAGGCCATCACTGTAGAAGTACCGAAGAAGCTGAAGGAATCATCAACTGTCTGTAAAAAAATTAGCAGGAAGAATCAGAGCAAAAGGGTGGTGAAAGAGGTGAGAGCAGAAGAGCTTTTTTCAGATGTGTGGGCGTGGCGTAAATATGGGCAAAAACCCATCAAGGGATCGCCATATCCGAGGAGCTATTACAGGTGCAGCAGCTCAAAAGGATGCTCAGCAAGAAAACAAGTGGAAAGGAGCTGTTCCAATCCTGAAACCTTCATCATAACCTACACTGCAGAACACAACCATGTCCATCCGACTCGTCGAAACTCTCTTGCCGGAAGCACTAGATCCAAGTTCCCATCATCTAAAAACAAAGACAAGTGTAAAAGTTCTTTGAATTCTCCAGCCACGACCAATTTGGCGGCTTCCATTGAAGAAGATCATGATGTGCAAAGCGCAAGTACTAGTACTGTAAAAGAGGAGGCACAATTGTTGTTGGAAGAGGATGAAATTAGTCATGAAAATGTCATGTTGGATGTGATGTTGAGTGATGAAATTATCCCAAGCTTAGAGGATTTGGATAGAGAGTTGGAACCAGTTATGGATGGTTGGTTTTTGGATCAATTTTCGGATAATTTTCCAAGTCCTTGGTTCAATATTGGTCACTCTAATACTGTAACAGGTGCTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

315

Amino Acids

35.34

Weight (kDa)

4.99

Isoelectric Point (pI)

63.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23550
fragaria_vesca	FvH4_5g03210 FvH4_5g03210
malus_domestica	MD06G1091200.v1.1 MD14G1112200.v1.1
prunus_persica	Prupe.5G106700_v2.0.a1 Prupe.5G106700_v2.0.a1
pyrus_communis	pycom06g08670 pycom14g10690
rosa_chinensis	RchiOBHm_Chr7g0196571
rosa_laevigata	RLG00000004005
rosa_multiflora	Rmu_sc0006080.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259200
rosa_rugosa	Rorug07G0034700 Rorug07G0034800
rosa_samantha	Rh7AG158800 Rh7BG160800 Rh7CG167200 Rh7DG160000
rosa_wichuraiana	Rw7G013880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	674
AclWI	GGATC	3 cut(s)	439, 594, 879
AcsI	RAATTY	1 cut(s)	649
AcuI	CTGAAG	1 cut(s)	317
AfaI	GTAC	3 cut(s)	285, 715, 721
AfiI	CCNNNNNNNGG	1 cut(s)	428
AgsI	TTSAA	5 cut(s)	113, 155, 649, 686, 907
AhlI	ACTAGT	1 cut(s)	716
AlwI	GGATC	3 cut(s)	439, 594, 879
AoxI	GGCC	1 cut(s)	267
ApeKI	GCWGC	3 cut(s)	164, 462, 465
ApoI	RAATTY	1 cut(s)	649
AspLEI	GCGC	1 cut(s)	710
AsuHPI	GGTGA	3 cut(s)	40, 367, 376
BbvCI	CCTCAGC	2 cut(s)	144, 220
BbvI	GCAGC	3 cut(s)	176, 474, 477
BccI	CCATC	5 cut(s)	278, 431, 570, 619, 851
BcuI	ACTAGT	1 cut(s)	716
BfaI	CTAG	2 cut(s)	597, 717
BfmI	CTRYAG	2 cut(s)	276, 543
BisI	GCNGC	4 cut(s)	165, 463, 466, 675
BlpI	GCTNAGC	1 cut(s)	481
BlsI	GCNGC	4 cut(s)	166, 464, 467, 676
BmcAI	AGTACT	2 cut(s)	715, 721
BmiI	GGNNCC	1 cut(s)	846
BmrI	ACTGGG	1 cut(s)	19
BmsI	GCATC	2 cut(s)	26, 467
BmuI	ACTGGG	1 cut(s)	19
BpmI	CTGGAG	1 cut(s)	639
Bpu10I	CCTNAGC	2 cut(s)	144, 220
Bpu1102I	GCTNAGC	1 cut(s)	481
BsaJI	CCNNGG	3 cut(s)	66, 443, 899
Bsc4I	CCNNNNNNNGG	1 cut(s)	428
Bse1I	ACTGG	4 cut(s)	14, 206, 230, 848
BseDI	CCNNGG	3 cut(s)	66, 443, 899
BseGI	GGATG	6 cut(s)	41, 482, 562, 763, 793, 862
BseLI	CCNNNNNNNGG	1 cut(s)	428
BseMII	CTCAG	3 cut(s)	158, 234, 495
BseNI	ACTGG	4 cut(s)	14, 206, 230, 848
BseRI	GAGGAG	4 cut(s)	197, 235, 460, 746
BseXI	GCAGC	3 cut(s)	176, 474, 477
BsgI	GTGCAG	1 cut(s)	481
BshFI	GGCC	1 cut(s)	269
BsiSI	CCGG	1 cut(s)	588
BslI	CCNNNNNNNGG	1 cut(s)	428
BsnI	GGCC	1 cut(s)	269
Bsp143I	GATC	4 cut(s)	431, 599, 691, 871
Bsp1720I	GCTNAGC	1 cut(s)	481
Bsp19I	CCATGG	1 cut(s)	66
BspACI	CCGC	1 cut(s)	674
BspANI	GGCC	1 cut(s)	269
BspCNI	CTCAG	3 cut(s)	157, 233, 494
BspHI	TCATGA	2 cut(s)	694, 769
BspLI	GGNNCC	1 cut(s)	846
BspMAI	CTGCAG	1 cut(s)	547
BspPI	GGATC	3 cut(s)	439, 594, 879
BspQI	GCTCTTC	1 cut(s)	369
BsrI	ACTGG	4 cut(s)	14, 206, 230, 848
BssECI	CCNNGG	3 cut(s)	66, 443, 899
BssMI	GATC	4 cut(s)	431, 599, 691, 871
BssT1I	CCWWGG	2 cut(s)	66, 899
Bst4CI	ACNGT	4 cut(s)	277, 313, 724, 928
Bst6I	CTCTTC	2 cut(s)	369, 747
BstC8I	GCNNGC	2 cut(s)	21, 940
BstDEI	CTNAG	4 cut(s)	144, 220, 481, 820
BstDSI	CCRYGG	1 cut(s)	66
BstF5I	GGATG	6 cut(s)	41, 482, 562, 763, 793, 862
BstHHI	GCGC	1 cut(s)	710
BstKTI	GATC	4 cut(s)	434, 602, 694, 874
BstMBI	GATC	4 cut(s)	431, 599, 691, 871
BstMWI	GCNNNNNNNGC	2 cut(s)	164, 193
BstSFI	CTRYAG	2 cut(s)	276, 543
BstV1I	GCAGC	3 cut(s)	176, 474, 477
BstX2I	RGATCY	1 cut(s)	599
BstXI	CCANNNNNNTGG	1 cut(s)	900
BstYI	RGATCY	1 cut(s)	599
BsuRI	GGCC	1 cut(s)	269
BtgI	CCRYGG	1 cut(s)	66
BtsCI	GGATG	6 cut(s)	41, 482, 562, 763, 793, 862
BtsI	GCAGTG	2 cut(s)	45, 540
BtsIMutI	CAGTG	3 cut(s)	45, 273, 540
Cac8I	GCNNGC	2 cut(s)	21, 940
CciI	TCATGA	2 cut(s)	694, 769
CfoI	GCGC	1 cut(s)	710
Csp6I	GTAC	3 cut(s)	284, 714, 720
CviAII	CATG	7 cut(s)	67, 134, 250, 557, 695, 770, 781
CviQI	GTAC	3 cut(s)	284, 714, 720
DdeI	CTNAG	4 cut(s)	144, 220, 481, 820
DpnI	GATC	4 cut(s)	433, 601, 693, 873
DpnII	GATC	4 cut(s)	431, 599, 691, 871
Eam1104I	CTCTTC	2 cut(s)	369, 747
EarI	CTCTTC	2 cut(s)	369, 747
Eco130I	CCWWGG	2 cut(s)	66, 899
Eco57I	CTGAAG	1 cut(s)	317
EcoRI	GAATTC	1 cut(s)	649
EcoT14I	CCWWGG	2 cut(s)	66, 899
ErhI	CCWWGG	2 cut(s)	66, 899
FaeI	CATG	7 cut(s)	70, 137, 253, 560, 698, 773, 784
FatI	CATG	7 cut(s)	66, 133, 249, 556, 694, 769, 780
Fnu4HI	GCNGC	4 cut(s)	165, 463, 466, 675
FokI	GGATG	6 cut(s)	48, 489, 549, 770, 800, 869
Fsp4HI	GCNGC	4 cut(s)	165, 463, 466, 675
FspBI	CTAG	2 cut(s)	597, 717
GlaI	GCGC	1 cut(s)	709
GluI	GCNGC	4 cut(s)	165, 463, 466, 675
GsuI	CTGGAG	1 cut(s)	639
HaeIII	GGCC	1 cut(s)	269
HapII	CCGG	1 cut(s)	588
HhaI	GCGC	1 cut(s)	710
Hin1II	CATG	7 cut(s)	70, 137, 253, 560, 698, 773, 784
Hin6I	GCGC	1 cut(s)	708
HinP1I	GCGC	1 cut(s)	708
HindIII	AAGCTT	1 cut(s)	817
HinfI	GANTC	3 cut(s)	302, 337, 568
HpaII	CCGG	1 cut(s)	588
HphI	GGTGA	3 cut(s)	40, 367, 376
Hpy188I	TCNGA	5 cut(s)	342, 388, 444, 567, 883
Hpy188III	TCNNGA	3 cut(s)	518, 695, 770
Hpy99I	CGWCG	1 cut(s)	576
HpyAV	CCTTC	2 cut(s)	292, 535
HpyCH4III	ACNGT	4 cut(s)	277, 313, 724, 928
HpyCH4V	TGCA	6 cut(s)	19, 39, 214, 462, 545, 703
HpyF10VI	GCNNNNNNNGC	2 cut(s)	164, 193
HpyF3I	CTNAG	4 cut(s)	144, 220, 481, 820
Hsp92II	CATG	7 cut(s)	70, 137, 253, 560, 698, 773, 784
HspAI	GCGC	1 cut(s)	708
Kzo9I	GATC	4 cut(s)	431, 599, 691, 871
LguI	GCTCTTC	1 cut(s)	369
LmnI	GCTCC	4 cut(s)	103, 184, 447, 504
LpnPI	CCDG	9 cut(s)	219, 243, 316, 442, 531, 601, 669, 861, 918
Lsp1109I	GCAGC	3 cut(s)	176, 474, 477
LweI	GCATC	2 cut(s)	26, 467
MaeI	CTAG	2 cut(s)	597, 717
MaeIII	GTNAC	2 cut(s)	914, 928
MalI	GATC	4 cut(s)	433, 601, 693, 873
MboI	GATC	4 cut(s)	431, 599, 691, 871
MboII	GAAGA	9 cut(s)	125, 128, 131, 301, 346, 386, 698, 701, 764
MfeI	CAATTG	1 cut(s)	740
MflI	RGATCY	1 cut(s)	599
MluCI	AATT	9 cut(s)	176, 324, 649, 667, 740, 762, 807, 875, 886
MlyI	GAGTC	1 cut(s)	562
MmeI	TCCRAC	4 cut(s)	590, 729, 765, 822
MseI	TTAA	1 cut(s)	104
MslI	CAYNNNNRTG	2 cut(s)	555, 774
MspA1I	CMGCKG	1 cut(s)	148
MspI	CCGG	1 cut(s)	588
MunI	CAATTG	1 cut(s)	740
MwoI	GCNNNNNNNGC	2 cut(s)	164, 193
NcoI	CCATGG	1 cut(s)	66
NdeII	GATC	4 cut(s)	431, 599, 691, 871
NlaIII	CATG	7 cut(s)	70, 137, 253, 560, 698, 773, 784
NlaIV	GGNNCC	1 cut(s)	846
NmuCI	GTSAC	1 cut(s)	914
PagI	TCATGA	2 cut(s)	694, 769
PciSI	GCTCTTC	1 cut(s)	369
PcsI	WCGNNNNNNNCGW	1 cut(s)	440
PfeI	GAWTC	2 cut(s)	302, 337
PkrI	GCNGC	4 cut(s)	166, 464, 467, 676
PleI	GAGTC	1 cut(s)	562
PpsI	GAGTC	1 cut(s)	562
PspN4I	GGNNCC	1 cut(s)	846
PstI	CTGCAG	1 cut(s)	547
PsuI	RGATCY	1 cut(s)	599
PvuII	CAGCTG	1 cut(s)	148
RsaI	GTAC	3 cut(s)	285, 715, 721
RsaNI	GTAC	3 cut(s)	284, 714, 720
RseI	CAYNNNNRTG	2 cut(s)	555, 774
SapI	GCTCTTC	1 cut(s)	369
SaqAI	TTAA	1 cut(s)	104
SatI	GCNGC	4 cut(s)	165, 463, 466, 675
Sau3AI	GATC	4 cut(s)	431, 599, 691, 871
ScaI	AGTACT	2 cut(s)	715, 721
SchI	GAGTC	1 cut(s)	562
SfaNI	GCATC	2 cut(s)	26, 467
SfcI	CTRYAG	2 cut(s)	276, 543
SmiMI	CAYNNNNRTG	2 cut(s)	555, 774
SpeI	ACTAGT	1 cut(s)	716
Sse9I	AATT	9 cut(s)	176, 324, 649, 667, 740, 762, 807, 875, 886
SsiI	CCGC	1 cut(s)	674
SspI	AATATT	2 cut(s)	55, 910
SspMI	CTAG	2 cut(s)	597, 717
StyI	CCWWGG	2 cut(s)	66, 899
TaaI	ACNGT	4 cut(s)	277, 313, 724, 928
TaqI	TCGA	1 cut(s)	574
TasI	AATT	9 cut(s)	176, 324, 649, 667, 740, 762, 807, 875, 886
TatI	WGTACW	2 cut(s)	713, 719
TauI	GCSGC	1 cut(s)	677
TfiI	GAWTC	2 cut(s)	302, 337
Tru1I	TTAA	1 cut(s)	104
Tru9I	TTAA	1 cut(s)	104
TscAI	CASTG	3 cut(s)	52, 280, 547
TseFI	GTSAC	1 cut(s)	914
TseI	GCWGC	3 cut(s)	164, 462, 465
Tsp45I	GTSAC	1 cut(s)	914
TspDTI	ATGAA	6 cut(s)	75, 189, 517, 774, 786, 819
TspRI	CASTG	3 cut(s)	52, 280, 547
XapI	RAATTY	1 cut(s)	649
XcmI	CCANNNNNNNNNTGG	1 cut(s)	667
XspI	CTAG	2 cut(s)	597, 717
ZrmI	AGTACT	2 cut(s)	715, 721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.