No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61660 AT3G61660 |
| fragaria_vesca | FvH4_5g04090 FvH4_7g16050 |
| malus_domestica | MD07G1146000.v1.1 |
| prunus_persica | Prupe.2G184300_v2.0.a1 Prupe.5G115500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0358991 RchiOBHm_Chr7g0195411 |
| rosa_multiflora | Rmu_sc0004044.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00297480 |
| rosa_rugosa | Rorug01G0266900 |
| rosa_samantha | Rh1AG280200 Rh1BG247200 Rh1CG264600 Rh1DG275500 |
| rosa_wichuraiana | Rw1G024910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 199 |
| AccBSI | CCGCTC | 1 cut(s) | 124 |
| AciI | CCGC | 2 cut(s) | 124, 175 |
| AcoI | YGGCCR | 1 cut(s) | 109 |
| AcsI | RAATTY | 1 cut(s) | 57 |
| AluBI | AGCT | 2 cut(s) | 41, 97 |
| AluI | AGCT | 2 cut(s) | 41, 97 |
| AoxI | GGCC | 2 cut(s) | 109, 135 |
| ApeKI | GCWGC | 2 cut(s) | 41, 50 |
| ApoI | RAATTY | 1 cut(s) | 57 |
| AspS9I | GGNCC | 2 cut(s) | 172, 258 |
| AsuHPI | GGTGA | 1 cut(s) | 179 |
| AvaII | GGWCC | 2 cut(s) | 172, 258 |
| BalI | TGGCCA | 1 cut(s) | 111 |
| BanII | GRGCYC | 1 cut(s) | 77 |
| BbvI | GCAGC | 2 cut(s) | 28, 37 |
| BfmI | CTRYAG | 1 cut(s) | 151 |
| BisI | GCNGC | 3 cut(s) | 42, 51, 125 |
| BlsI | GCNGC | 3 cut(s) | 43, 52, 126 |
| Bme18I | GGWCC | 2 cut(s) | 172, 258 |
| BmgT120I | GGNCC | 2 cut(s) | 172, 258 |
| BmiI | GGNNCC | 1 cut(s) | 74 |
| BpuEI | CTTGAG | 1 cut(s) | 140 |
| BsaWI | WCCGGW | 1 cut(s) | 260 |
| Bse3DI | GCAATG | 1 cut(s) | 235 |
| BseMI | GCAATG | 1 cut(s) | 235 |
| BseXI | GCAGC | 2 cut(s) | 28, 37 |
| BshFI | GGCC | 2 cut(s) | 111, 137 |
| BsiSI | CCGG | 1 cut(s) | 261 |
| BslFI | GGGAC | 3 cut(s) | 77, 170, 295 |
| BsmFI | GGGAC | 3 cut(s) | 77, 170, 295 |
| BsnI | GGCC | 2 cut(s) | 111, 137 |
| Bsp1286I | GDGCHC | 1 cut(s) | 77 |
| BspACI | CCGC | 2 cut(s) | 124, 175 |
| BspANI | GGCC | 2 cut(s) | 111, 137 |
| BspLI | GGNNCC | 1 cut(s) | 74 |
| BspMAI | CTGCAG | 1 cut(s) | 155 |
| BsrBI | CCGCTC | 1 cut(s) | 124 |
| BsrDI | GCAATG | 1 cut(s) | 235 |
| Bst4CI | ACNGT | 1 cut(s) | 68 |
| Bst6I | CTCTTC | 4 cut(s) | 12, 24, 209, 296 |
| BstC8I | GCNNGC | 1 cut(s) | 99 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 47, 50 |
| BstSFI | CTRYAG | 1 cut(s) | 151 |
| BstV1I | GCAGC | 2 cut(s) | 28, 37 |
| BsuRI | GGCC | 2 cut(s) | 111, 137 |
| Cac8I | GCNNGC | 1 cut(s) | 99 |
| Cfr13I | GGNCC | 2 cut(s) | 172, 258 |
| CseI | GACGC | 1 cut(s) | 292 |
| CviAII | CATG | 1 cut(s) | 178 |
| CviJI | RGCY | 6 cut(s) | 41, 75, 97, 101, 111, 137 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 75, 97, 101, 111, 137 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 199 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 199 |
| EaeI | YGGCCR | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 4 cut(s) | 12, 24, 209, 296 |
| EarI | CTCTTC | 4 cut(s) | 12, 24, 209, 296 |
| Eco24I | GRGCYC | 1 cut(s) | 77 |
| Eco47I | GGWCC | 2 cut(s) | 172, 258 |
| EcoT38I | GRGCYC | 1 cut(s) | 77 |
| FaeI | CATG | 1 cut(s) | 181 |
| FaiI | YATR | 6 cut(s) | 84, 93, 114, 179, 270, 315 |
| FaqI | GGGAC | 3 cut(s) | 77, 170, 295 |
| FatI | CATG | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 3 cut(s) | 42, 51, 125 |
| FriOI | GRGCYC | 1 cut(s) | 77 |
| Fsp4HI | GCNGC | 3 cut(s) | 42, 51, 125 |
| GluI | GCNGC | 3 cut(s) | 42, 51, 125 |
| HaeIII | GGCC | 2 cut(s) | 111, 137 |
| HapII | CCGG | 1 cut(s) | 261 |
| HgaI | GACGC | 1 cut(s) | 292 |
| Hin1II | CATG | 1 cut(s) | 181 |
| HinfI | GANTC | 2 cut(s) | 86, 158 |
| HpaII | CCGG | 1 cut(s) | 261 |
| HphI | GGTGA | 1 cut(s) | 179 |
| Hpy188I | TCNGA | 2 cut(s) | 205, 240 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| HpyAV | CCTTC | 3 cut(s) | 7, 148, 214 |
| HpyCH4III | ACNGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 2 cut(s) | 153, 297 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 47, 50 |
| Hsp92II | CATG | 1 cut(s) | 181 |
| LmnI | GCTCC | 1 cut(s) | 72 |
| LpnPI | CCDG | 5 cut(s) | 83, 139, 147, 274, 283 |
| Lsp1109I | GCAGC | 2 cut(s) | 28, 37 |
| MbiI | CCGCTC | 1 cut(s) | 124 |
| MboII | GAAGA | 9 cut(s) | 19, 22, 29, 38, 41, 47, 226, 259, 313 |
| MhlI | GDGCHC | 1 cut(s) | 77 |
| MlsI | TGGCCA | 1 cut(s) | 111 |
| MluCI | AATT | 1 cut(s) | 57 |
| MluNI | TGGCCA | 1 cut(s) | 111 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MnlI | CCTC | 3 cut(s) | 25, 163, 210 |
| Mox20I | TGGCCA | 1 cut(s) | 111 |
| MscI | TGGCCA | 1 cut(s) | 111 |
| MseI | TTAA | 1 cut(s) | 254 |
| Msp20I | TGGCCA | 1 cut(s) | 111 |
| MspI | CCGG | 1 cut(s) | 261 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 47, 50 |
| NlaIII | CATG | 1 cut(s) | 181 |
| NlaIV | GGNNCC | 1 cut(s) | 74 |
| PfeI | GAWTC | 1 cut(s) | 86 |
| PkrI | GCNGC | 3 cut(s) | 43, 52, 126 |
| PleI | GAGTC | 1 cut(s) | 152 |
| PpsI | GAGTC | 1 cut(s) | 152 |
| PspN4I | GGNNCC | 1 cut(s) | 74 |
| PspPI | GGNCC | 2 cut(s) | 172, 258 |
| PstI | CTGCAG | 1 cut(s) | 155 |
| SaqAI | TTAA | 1 cut(s) | 254 |
| SatI | GCNGC | 3 cut(s) | 42, 51, 125 |
| Sau96I | GGNCC | 2 cut(s) | 172, 258 |
| SchI | GAGTC | 1 cut(s) | 152 |
| SduI | GDGCHC | 1 cut(s) | 77 |
| SetI | ASST | 2 cut(s) | 43, 99 |
| SfcI | CTRYAG | 1 cut(s) | 151 |
| SgeI | CNNG | 9 cut(s) | 91, 110, 131, 166, 174, 190, 273, 290, 310 |
| SinI | GGWCC | 2 cut(s) | 172, 258 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| Sse9I | AATT | 1 cut(s) | 57 |
| SsiI | CCGC | 2 cut(s) | 124, 175 |
| TaaI | ACNGT | 1 cut(s) | 68 |
| TasI | AATT | 1 cut(s) | 57 |
| TauI | GCSGC | 1 cut(s) | 127 |
| TfiI | GAWTC | 1 cut(s) | 86 |
| Tru1I | TTAA | 1 cut(s) | 254 |
| Tru9I | TTAA | 1 cut(s) | 254 |
| TseI | GCWGC | 2 cut(s) | 41, 50 |
| TspDTI | ATGAA | 2 cut(s) | 20, 257 |
| VpaK11BI | GGWCC | 2 cut(s) | 172, 258 |
| XapI | RAATTY | 1 cut(s) | 57 |