Prupe.5G146100_v2.0.a1
NAC Family

NAC transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0007675
Physical Location & Seq
Reverse (-)
13431803 .. 13433032
1230 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G146100.1

Sequence Viewer

Length: 795 bp
ATGGTTGCTCGGCATTCCTCATCTCAGTTGACAGAGGCCATTAAGAATCAAGAAAAAGGCTTTCATTTTTGTTTTTGTTTTTGTTTTTCAACAATGGACAAGTTCAACTTTGTTAGAAATGGGATGATCAGATTGCCTCCTGGTTTTCGTTTCCAGCCTACAGATGAAGAGCTGGTCTTTCAGTACCTAAGATGCAAAGTCTTTTCATGCCCTCTGCCTGCTTCAATAATTCCTGAGGTCAATGTTTGCATGTATGATCCGTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGATATTTCTTCAGCAACAAGGAATCAAAATACAGGAATGGGAGCAGAGCCAACAGGGTGACAAGTTCTGGTTATTGGAAAGCAACCGGCACTGATAAAAAGATTGTATCTTCAAGGAGGAACCATATTGTGGGGAAGAAAAAGACTCTTGTTTTCTACAGAGGAAAGGCTCCAAATGGTTGTAAAACAGATTGGGTCATGCATGAGTATTGCCTTGTCAATGCAGAAACTACAGCCTCCATCAACACAGCCGAGAATGCTTTAAACGAGAAAGAAAATTGGGTTCTGTGTCGAATATTTTCGAAGAAAAGAAGTTGTAAGACTGATGATGAGGAAGGCATCAGAGTTAACAATGCTGAAATGGTTCATGCACCTCAGACTAATAATAATCAAAGTCCTGTGTCTTCTTCTTCATCGTGCTCAAGTTCTAGTGGGATTACAGAAGTAACTTCTTCAAGTGAAGCAGGTGATGAAGAAGAAATCAGTGGGTGCACTAAGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

265

Amino Acids

29.87

Weight (kDa)

8.21

Isoelectric Point (pI)

53.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 746
Acc36I ACCTGC 1 cut(s) 746
AccB7I CCANNNNNTGG 1 cut(s) 421
AclWI GGATC 1 cut(s) 251
AcuI CTGAAG 1 cut(s) 286
AfaI GTAC 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 421
AgsI TTSAA 5 cut(s) 90, 106, 225, 405, 747
AjnI CCWGG 2 cut(s) 139, 271
AluBI AGCT 1 cut(s) 172
AluI AGCT 1 cut(s) 172
Alw21I GWGCWC 2 cut(s) 713, 785
Alw44I GTGCAC 1 cut(s) 781
AlwI GGATC 1 cut(s) 251
AoxI GGCC 1 cut(s) 36
ApaLI GTGCAC 1 cut(s) 781
Asp700I GAANNNNTTC 2 cut(s) 589, 654
AsuHPI GGTGA 3 cut(s) 287, 361, 770
AsuII TTCGAA 1 cut(s) 593
AxyI CCTNAGG 1 cut(s) 234
BaeGI GKGCMC 1 cut(s) 785
BbsI GAAGAC 1 cut(s) 687
Bbv12I GWGCWC 2 cut(s) 713, 785
BccI CCATC 1 cut(s) 539
BciT130I CCWGG 2 cut(s) 141, 273
BclI TGATCA 1 cut(s) 126
BfaI CTAG 1 cut(s) 720
BfmI CTRYAG 3 cut(s) 159, 448, 522
BfuAI ACCTGC 1 cut(s) 746
Bme1390I CCNGG 2 cut(s) 141, 273
BmiI GGNNCC 2 cut(s) 413, 462
BmrFI CCNGG 2 cut(s) 141, 273
BmsI GCATC 2 cut(s) 182, 639
BpiI GAAGAC 1 cut(s) 687
Bpu14I TTCGAA 1 cut(s) 593
BpuEI CTTGAG 1 cut(s) 697
BsaJI CCNNGG 1 cut(s) 260
Bsc4I CCNNNNNNNGG 1 cut(s) 421
Bse118I RCCGGY 1 cut(s) 377
Bse21I CCTNAGG 1 cut(s) 234
BseBI CCWGG 2 cut(s) 141, 273
BseDI CCNNGG 1 cut(s) 260
BseGI GGATG 1 cut(s) 129
BseLI CCNNNNNNNGG 1 cut(s) 421
BseMII CTCAG 3 cut(s) 38, 225, 680
BseSI GKGCMC 1 cut(s) 785
BshFI GGCC 1 cut(s) 38
BsiHKAI GWGCWC 2 cut(s) 713, 785
BsiSI CCGG 1 cut(s) 378
BslI CCNNNNNNNGG 1 cut(s) 421
BsmI GAATGC 2 cut(s) 13, 553
BsnI GGCC 1 cut(s) 38
Bsp119I TTCGAA 1 cut(s) 593
Bsp1286I GDGCHC 2 cut(s) 713, 785
Bsp143I GATC 2 cut(s) 126, 256
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 3 cut(s) 37, 226, 679
BspLI GGNNCC 2 cut(s) 413, 462
BspMI ACCTGC 1 cut(s) 746
BspPI GGATC 1 cut(s) 251
BspQI GCTCTTC 1 cut(s) 162
BspT104I TTCGAA 1 cut(s) 593
BsrFI RCCGGY 1 cut(s) 377
BssAI RCCGGY 1 cut(s) 377
BssECI CCNNGG 1 cut(s) 260
BssMI GATC 2 cut(s) 126, 256
Bst2UI CCWGG 2 cut(s) 141, 273
Bst6I CTCTTC 1 cut(s) 162
BstBI TTCGAA 1 cut(s) 593
BstC8I GCNNGC 1 cut(s) 219
BstDEI CTNAG 5 cut(s) 24, 188, 234, 666, 786
BstDSI CCRYGG 1 cut(s) 260
BstF5I GGATG 1 cut(s) 129
BstKTI GATC 2 cut(s) 129, 259
BstMBI GATC 2 cut(s) 126, 256
BstMWI GCNNNNNNNGC 1 cut(s) 548
BstNI CCWGG 2 cut(s) 141, 273
BstNSI RCATGY 1 cut(s) 253
BstSCI CCNGG 2 cut(s) 139, 271
BstSFI CTRYAG 3 cut(s) 159, 448, 522
BstSLI GKGCMC 1 cut(s) 785
BstV2I GAAGAC 1 cut(s) 687
Bsu36I CCTNAGG 1 cut(s) 234
BsuRI GGCC 1 cut(s) 38
BtgI CCRYGG 1 cut(s) 260
BtsCI GGATG 1 cut(s) 129
BtsIMutI CAGTG 2 cut(s) 381, 781
BveI ACCTGC 1 cut(s) 746
Cac8I GCNNGC 1 cut(s) 219
Cfr10I RCCGGY 1 cut(s) 377
Csp6I GTAC 1 cut(s) 184
CviAII CATG 5 cut(s) 207, 250, 490, 494, 659
CviJI RGCY 8 cut(s) 38, 60, 157, 172, 341, 461, 527, 542
CviKI_1 RGCY 8 cut(s) 38, 60, 157, 172, 341, 461, 527, 542
CviQI GTAC 1 cut(s) 184
DdeI CTNAG 5 cut(s) 24, 188, 234, 666, 786
DpnI GATC 2 cut(s) 128, 258
DpnII GATC 2 cut(s) 126, 256
DraI TTTAAA 1 cut(s) 555
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Eco57I CTGAAG 1 cut(s) 286
Eco81I CCTNAGG 1 cut(s) 234
EcoRII CCWGG 2 cut(s) 139, 271
EcoT22I ATGCAT 1 cut(s) 495
FaeI CATG 5 cut(s) 210, 253, 493, 497, 662
FaiI YATR 7 cut(s) 208, 251, 255, 417, 491, 495, 660
FalI AAGNNNNNCTT 2 cut(s) 92, 124
FatI CATG 5 cut(s) 206, 249, 489, 493, 658
FbaI TGATCA 1 cut(s) 126
FokI GGATG 1 cut(s) 136
FspBI CTAG 1 cut(s) 720
HaeIII GGCC 1 cut(s) 38
HapII CCGG 1 cut(s) 378
Hin1II CATG 5 cut(s) 210, 253, 493, 497, 662
HincII GTYRAC 2 cut(s) 30, 640
HindII GTYRAC 2 cut(s) 30, 640
HinfI GANTC 3 cut(s) 46, 314, 436
HpaI GTTAAC 1 cut(s) 640
HpaII CCGG 1 cut(s) 378
HphI GGTGA 3 cut(s) 287, 361, 770
Hpy166II GTNNAC 3 cut(s) 30, 640, 783
Hpy188I TCNGA 3 cut(s) 131, 635, 669
Hpy188III TCNNGA 2 cut(s) 50, 233
Hpy8I GTNNAC 3 cut(s) 30, 640, 783
HpyAV CCTTC 1 cut(s) 620
HpyCH4V TGCA 6 cut(s) 195, 249, 493, 515, 662, 783
HpyF10VI GCNNNNNNNGC 1 cut(s) 548
HpyF3I CTNAG 5 cut(s) 24, 188, 234, 666, 786
Hsp92II CATG 5 cut(s) 210, 253, 493, 497, 662
Ksp22I TGATCA 1 cut(s) 126
KspAI GTTAAC 1 cut(s) 640
Kzo9I GATC 2 cut(s) 126, 256
LguI GCTCTTC 1 cut(s) 162
LmnI GCTCC 3 cut(s) 283, 333, 466
LweI GCATC 2 cut(s) 182, 639
MaeI CTAG 1 cut(s) 720
MaeIII GTNAC 2 cut(s) 349, 736
MalI GATC 2 cut(s) 128, 258
MboI GATC 2 cut(s) 126, 256
MhlI GDGCHC 2 cut(s) 713, 785
MluCI AATT 2 cut(s) 228, 568
MlyI GAGTC 1 cut(s) 430
Mph1103I ATGCAT 1 cut(s) 495
MroXI GAANNNNTTC 2 cut(s) 589, 654
MseI TTAA 3 cut(s) 42, 554, 639
MspI CCGG 1 cut(s) 378
MspR9I CCNGG 2 cut(s) 141, 273
Mva1269I GAATGC 2 cut(s) 13, 553
MvaI CCWGG 2 cut(s) 141, 273
MwoI GCNNNNNNNGC 1 cut(s) 548
NdeII GATC 2 cut(s) 126, 256
NlaIII CATG 5 cut(s) 210, 253, 493, 497, 662
NlaIV GGNNCC 2 cut(s) 413, 462
NmeAIII GCCGAG 1 cut(s) 568
NmuCI GTSAC 1 cut(s) 349
NsiI ATGCAT 1 cut(s) 495
NspI RCATGY 1 cut(s) 253
NspV TTCGAA 1 cut(s) 593
PaqCI CACCTGC 1 cut(s) 746
PciSI GCTCTTC 1 cut(s) 162
PctI GAATGC 2 cut(s) 13, 553
PdmI GAANNNNTTC 2 cut(s) 589, 654
PfeI GAWTC 2 cut(s) 46, 314
PflMI CCANNNNNTGG 1 cut(s) 421
PleI GAGTC 1 cut(s) 430
PpsI GAGTC 1 cut(s) 430
Psp6I CCWGG 2 cut(s) 139, 271
PspGI CCWGG 2 cut(s) 139, 271
PspN4I GGNNCC 2 cut(s) 413, 462
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
SapI GCTCTTC 1 cut(s) 162
SaqAI TTAA 3 cut(s) 42, 554, 639
Sau3AI GATC 2 cut(s) 126, 256
SchI GAGTC 1 cut(s) 430
ScrFI CCNGG 2 cut(s) 141, 273
SduI GDGCHC 2 cut(s) 713, 785
SetI ASST 6 cut(s) 174, 189, 240, 277, 667, 760
SfaNI GCATC 2 cut(s) 182, 639
SfcI CTRYAG 3 cut(s) 159, 448, 522
SfuI TTCGAA 1 cut(s) 593
SmlI CTYRAG 1 cut(s) 712
SmoI CTYRAG 1 cut(s) 712
Sse9I AATT 2 cut(s) 228, 568
SspI AATATT 1 cut(s) 588
SspMI CTAG 1 cut(s) 720
StyD4I CCNGG 2 cut(s) 139, 271
TaqI TCGA 2 cut(s) 583, 593
TasI AATT 2 cut(s) 228, 568
TfiI GAWTC 2 cut(s) 46, 314
Tru1I TTAA 3 cut(s) 42, 554, 639
Tru9I TTAA 3 cut(s) 42, 554, 639
TscAI CASTG 2 cut(s) 388, 781
TseFI GTSAC 1 cut(s) 349
Tsp45I GTSAC 1 cut(s) 349
TspDTI ATGAA 6 cut(s) 53, 180, 195, 647, 693, 777
TspGWI ACGGA 1 cut(s) 249
TspRI CASTG 2 cut(s) 388, 781
Van91I CCANNNNNTGG 1 cut(s) 421
VneI GTGCAC 1 cut(s) 781
XceI RCATGY 1 cut(s) 253
XmnI GAANNNNTTC 2 cut(s) 589, 654
XspI CTAG 1 cut(s) 720
Zsp2I ATGCAT 1 cut(s) 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.