Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009141

Physical Location & Seq

Genomic Coordinates Reverse (-)

13516214 .. 13517452

Gene Structure 1239 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G147200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGACCACCAGTAAGCGGGTGCAAGACAGAAGCAAGTTGAAGAGGGTTCATGATCTTGAGATTGTCACTGAGAAATGGAAGATAGCATCCAAAGTGCTCTTCTTGATGGAAATTCTTAAAAAAGAGCCTGAAATGATCATTCCCGTTAGGTCATTGGATCAGTACCGCAGCCAGATTAGTCTCCCAAAACCTCATCGAGTGTCTGATTTTATTCGGAAATCGCCGAAATTGTTTGAACTGTACAAGGATCACAGAAGGGTTTTATGGTGTGGGATGACCAAGAAAGCTGAGGACTTGGTAGAAGAGGAGGATAGGATACTTGAGGAACATCAAGATAAGGCTGCTGAGTATGTCACTCGTTTTCTGATGATGTCTGTTGATAAAAGGCTTGCTTTGGACAAGATTGTCCATTTTAGGAGGGACTTTGCTCTGCCAGTTGATTTTAGGACTGGTTGGGTGCACAAATATCCCCAACACTTTAAGCTGGTTAAAGATGAAGAGGGGCTTGAGTATTTGGAACTTGTTAATTGGAACCCTGCTTGGGCTATAACAGAGTTGGAGAAGAAGACAATGGGGATCACTGAGGCCAGTGAGGATCATACGCCGGGCTTACTTTCTATCTCTTTTCCTTTGAAGTTCCCTCCCAATTACAAAAAGGCATACAAGTATAGAGGAGCAATTGATCATTTTCAGAAAAGGTCTTATTTATCTCCATATGCAGATGCTAGGGGACTCAAAGCTGGGTCTAAAGAATTTGACAAGAGGGCAGTGGCTATTATGCATGAGCTGCTTAGCTTTACTGTTGAGAAGAGATTGGTGACTGATCACCTCACTCACTTTCGACACGAACTGGTGATGCCCCAAAAGCTTATGAGACTTCTTCTGAAGCATTTCGGCATCTTCTATGTTTCGGAGAGGGGGAAGAGATTTAGTGTCTTCTTGAAAGAAGCTTATGAGGGATCAGAGCTGATTGAGAAAAGCCCTCTGGTGCTATGGAAGGAAAAAGTCCAGAGCCTTATTGGTTATAGAGGGAAGAAGAAGATAGAGAATTTTAGTGATATGTCAGACATGGAAGACAATGGTTTCGATGAGAGCCAATCCGAAAATGAGGACATTGACTTGCAAAGTGAGCAAGAGGAGACAGAGGGTGACATGGAGGATGATTCACTTGGAGATAATTCTGAAATGGACATTGATGAGGTTTGCAGTGCATATGAGGATAATACTAAAAGATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PORR

Protein Analysis

413

Amino Acids

48.53

Weight (kDa)

6.11

Isoelectric Point (pI)

50.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21970 AT5G21970
fragaria_vesca	FvH4_6g20760
malus_domestica	MD14G1152200.v1.1
prunus_persica	Prupe.5G147200_v2.0.a1
pyrus_communis	pycom06g12860 pycom14g12660
rosa_chinensis	RchiOBHm_Chr3g0476641 RchiOBHm_Chr3g0476651
rosa_laevigata	RLG00000018714 RLG00000023758
rosa_multiflora	Rmu_sc0008241.1_g000013
rosa_roxburghii	Rroxscaffold_2G00121200 Rroxscaffold_6G00405130
rosa_rugosa	Rorug03G0156200
rosa_samantha	Rh2AG301200 Rh2DG325400 Rh3AG206500 Rh3BG238900 Rh3CG232800 Rh3DG232800
rosa_wichuraiana	Rw3G018810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	404
AciI	CCGC	2 cut(s)	16, 166
AclWI	GGATC	5 cut(s)	165, 255, 584, 603, 967
AcsI	RAATTY	3 cut(s)	111, 752, 1048
AcuI	CTGAAG	1 cut(s)	905
AfaI	GTAC	2 cut(s)	164, 242
AfiI	CCNNNNNNNGG	2 cut(s)	15, 541
AgsI	TTSAA	4 cut(s)	40, 236, 634, 943
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
AluBI	AGCT	8 cut(s)	287, 484, 740, 787, 795, 868, 950, 967
AluI	AGCT	8 cut(s)	287, 484, 740, 787, 795, 868, 950, 967
Alw21I	GWGCWC	2 cut(s)	99, 462
Alw26I	GTCTC	3 cut(s)	185, 868, 1133
Alw44I	GTGCAC	1 cut(s)	458
AlwI	GGATC	5 cut(s)	165, 255, 584, 603, 967
AoxI	GGCC	1 cut(s)	585
ApaLI	GTGCAC	1 cut(s)	458
ApeKI	GCWGC	3 cut(s)	168, 341, 787
ApoI	RAATTY	3 cut(s)	111, 752, 1048
ArsI	GACNNNNNNTTYG	2 cut(s)	1067, 1099
Asp700I	GAANNNNTTC	1 cut(s)	890
AsuC2I	CCSGG	1 cut(s)	606
AsuHPI	GGTGA	4 cut(s)	818, 829, 865, 1160
BaeGI	GKGCMC	1 cut(s)	462
BbsI	GAAGAC	3 cut(s)	572, 928, 1080
Bbv12I	GWGCWC	2 cut(s)	99, 462
BbvCI	CCTCAGC	1 cut(s)	288
BbvI	GCAGC	3 cut(s)	180, 328, 774
BccI	CCATC	1 cut(s)	100
BciVI	GTATCC	1 cut(s)	309
BclI	TGATCA	3 cut(s)	135, 682, 823
BcnI	CCSGG	1 cut(s)	606
BcoDI	GTCTC	3 cut(s)	185, 868, 1133
BfaI	CTAG	1 cut(s)	726
BfuI	GTATCC	1 cut(s)	309
BisI	GCNGC	3 cut(s)	169, 342, 788
BlpI	GCTNAGC	1 cut(s)	791
BlsI	GCNGC	3 cut(s)	170, 343, 789
Bme1390I	CCNGG	1 cut(s)	606
BmiI	GGNNCC	1 cut(s)	533
BmrFI	CCNGG	1 cut(s)	606
BmsI	GCATC	4 cut(s)	95, 712, 846, 906
BpiI	GAAGAC	3 cut(s)	572, 928, 1080
Bpu10I	CCTNAGC	1 cut(s)	288
Bpu1102I	GCTNAGC	1 cut(s)	791
BpuEI	CTTGAG	3 cut(s)	77, 341, 527
BpuMI	CCSGG	1 cut(s)	606
Bsc4I	CCNNNNNNNGG	2 cut(s)	15, 541
Bse1I	ACTGG	5 cut(s)	9, 434, 454, 588, 855
BseGI	GGATG	3 cut(s)	86, 279, 1165
BseLI	CCNNNNNNNGG	2 cut(s)	15, 541
BseMII	CTCAG	4 cut(s)	60, 279, 336, 573
BseNI	ACTGG	5 cut(s)	9, 434, 454, 588, 855
BseRI	GAGGAG	3 cut(s)	320, 687, 1151
BseSI	GKGCMC	1 cut(s)	462
BseXI	GCAGC	3 cut(s)	180, 328, 774
BseYI	CCCAGC	1 cut(s)	740
BshFI	GGCC	1 cut(s)	587
BsiHKAI	GWGCWC	2 cut(s)	99, 462
BsiSI	CCGG	1 cut(s)	605
BslFI	GGGAC	2 cut(s)	434, 744
BslI	CCNNNNNNNGG	2 cut(s)	15, 541
BsmAI	GTCTC	3 cut(s)	185, 868, 1133
BsmFI	GGGAC	2 cut(s)	434, 744
BsnI	GGCC	1 cut(s)	587
Bsp1286I	GDGCHC	2 cut(s)	99, 462
Bsp1407I	TGTACA	1 cut(s)	240
Bsp143I	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
Bsp1720I	GCTNAGC	1 cut(s)	791
BspACI	CCGC	2 cut(s)	16, 166
BspANI	GGCC	1 cut(s)	587
BspCNI	CTCAG	4 cut(s)	61, 280, 337, 574
BspHI	TCATGA	1 cut(s)	49
BspLI	GGNNCC	1 cut(s)	533
BspPI	GGATC	5 cut(s)	165, 255, 584, 603, 967
BspQI	GCTCTTC	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	240
BsrI	ACTGG	5 cut(s)	9, 434, 454, 588, 855
BssMI	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
Bst4CI	ACNGT	2 cut(s)	240, 802
Bst6I	CTCTTC	6 cut(s)	35, 104, 297, 492, 803, 917
BstAPI	GCANNNNNTGC	1 cut(s)	787
BstAUI	TGTACA	1 cut(s)	240
BstC8I	GCNNGC	1 cut(s)	390
BstDEI	CTNAG	5 cut(s)	69, 288, 345, 582, 791
BstF5I	GGATG	3 cut(s)	86, 279, 1165
BstKTI	GATC	9 cut(s)	55, 138, 160, 250, 579, 598, 685, 826, 962
BstMAI	GTCTC	3 cut(s)	185, 868, 1133
BstMBI	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
BstMWI	GCNNNNNNNGC	3 cut(s)	787, 865, 1129
BstSCI	CCNGG	1 cut(s)	604
BstSLI	GKGCMC	1 cut(s)	462
BstV1I	GCAGC	3 cut(s)	180, 328, 774
BstV2I	GAAGAC	3 cut(s)	572, 928, 1080
BsuI	GTATCC	1 cut(s)	309
BsuRI	GGCC	1 cut(s)	587
BtsCI	GGATG	3 cut(s)	86, 279, 1165
BtsI	GCAGTG	2 cut(s)	774, 1213
BtsIMutI	CAGTG	5 cut(s)	66, 579, 595, 774, 1213
Cac8I	GCNNGC	1 cut(s)	390
CciI	TCATGA	1 cut(s)	49
Csp6I	GTAC	2 cut(s)	163, 241
CviAII	CATG	4 cut(s)	50, 782, 1069, 1153
CviQI	GTAC	2 cut(s)	163, 241
DdeI	CTNAG	5 cut(s)	69, 288, 345, 582, 791
DpnI	GATC	9 cut(s)	54, 137, 159, 249, 578, 597, 684, 825, 961
DpnII	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
DrdI	GACNNNNNNGTC	1 cut(s)	404
DseDI	GACNNNNNNGTC	1 cut(s)	404
Eam1104I	CTCTTC	6 cut(s)	35, 104, 297, 492, 803, 917
EarI	CTCTTC	6 cut(s)	35, 104, 297, 492, 803, 917
Eco57I	CTGAAG	1 cut(s)	905
EcoT22I	ATGCAT	1 cut(s)	783
FaeI	CATG	4 cut(s)	53, 785, 1072, 1156
FalI	AAGNNNNNCTT	4 cut(s)	376, 408, 489, 521
FaqI	GGGAC	2 cut(s)	434, 744
FatI	CATG	4 cut(s)	49, 781, 1068, 1152
FauI	CCCGC	1 cut(s)	9
FauNDI	CATATG	2 cut(s)	715, 1213
FbaI	TGATCA	3 cut(s)	135, 682, 823
Fnu4HI	GCNGC	3 cut(s)	169, 342, 788
FokI	GGATG	3 cut(s)	73, 286, 1172
Fsp4HI	GCNGC	3 cut(s)	169, 342, 788
FspBI	CTAG	1 cut(s)	726
GluI	GCNGC	3 cut(s)	169, 342, 788
GsaI	CCCAGC	1 cut(s)	744
HaeIII	GGCC	1 cut(s)	587
HapII	CCGG	1 cut(s)	605
Hin1II	CATG	4 cut(s)	53, 785, 1072, 1156
HindIII	AAGCTT	2 cut(s)	866, 948
HinfI	GANTC	2 cut(s)	732, 1163
HpaII	CCGG	1 cut(s)	605
HphI	GGTGA	4 cut(s)	818, 829, 865, 1160
Hpy166II	GTNNAC	1 cut(s)	460
Hpy188III	TCNNGA	6 cut(s)	50, 56, 103, 332, 940, 1009
Hpy8I	GTNNAC	1 cut(s)	460
HpyAV	CCTTC	2 cut(s)	249, 991
HpyCH4III	ACNGT	2 cut(s)	240, 802
HpyCH4V	TGCA	7 cut(s)	22, 460, 719, 781, 1123, 1206, 1211
HpyF10VI	GCNNNNNNNGC	3 cut(s)	787, 865, 1129
HpyF3I	CTNAG	5 cut(s)	69, 288, 345, 582, 791
Hsp92II	CATG	4 cut(s)	53, 785, 1072, 1156
Ksp22I	TGATCA	3 cut(s)	135, 682, 823
Kzo9I	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
LguI	GCTCTTC	1 cut(s)	104
LmnI	GCTCC	1 cut(s)	674
Lsp1109I	GCAGC	3 cut(s)	180, 328, 774
LweI	GCATC	4 cut(s)	95, 712, 846, 906
MaeI	CTAG	1 cut(s)	726
MaeIII	GTNAC	4 cut(s)	64, 352, 817, 1148
MalI	GATC	9 cut(s)	54, 137, 159, 249, 578, 597, 684, 825, 961
MboI	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
MfeI	CAATTG	1 cut(s)	678
MhlI	GDGCHC	2 cut(s)	99, 462
MluCI	AATT	8 cut(s)	111, 227, 526, 646, 678, 752, 1048, 1177
MlyI	GAGTC	1 cut(s)	726
MmeI	TCCRAC	1 cut(s)	537
Mph1103I	ATGCAT	1 cut(s)	783
MroXI	GAANNNNTTC	1 cut(s)	890
MseI	TTAA	5 cut(s)	117, 480, 489, 525, 1237
MspI	CCGG	1 cut(s)	605
MspR9I	CCNGG	1 cut(s)	606
MunI	CAATTG	1 cut(s)	678
MwoI	GCNNNNNNNGC	3 cut(s)	787, 865, 1129
NciI	CCSGG	1 cut(s)	606
NdeI	CATATG	2 cut(s)	715, 1213
NdeII	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
NlaIII	CATG	4 cut(s)	53, 785, 1072, 1156
NlaIV	GGNNCC	1 cut(s)	533
NmuCI	GTSAC	4 cut(s)	64, 352, 817, 1148
NsiI	ATGCAT	1 cut(s)	783
PagI	TCATGA	1 cut(s)	49
PciSI	GCTCTTC	1 cut(s)	104
PdmI	GAANNNNTTC	1 cut(s)	890
PfeI	GAWTC	1 cut(s)	1163
PkrI	GCNGC	3 cut(s)	170, 343, 789
PleI	GAGTC	1 cut(s)	726
PpsI	GAGTC	1 cut(s)	726
PspFI	CCCAGC	1 cut(s)	740
PspN4I	GGNNCC	1 cut(s)	533
RsaI	GTAC	2 cut(s)	164, 242
RsaNI	GTAC	2 cut(s)	163, 241
SapI	GCTCTTC	1 cut(s)	104
SaqAI	TTAA	5 cut(s)	117, 480, 489, 525, 1237
SatI	GCNGC	3 cut(s)	169, 342, 788
Sau3AI	GATC	9 cut(s)	52, 135, 157, 247, 576, 595, 682, 823, 959
SchI	GAGTC	1 cut(s)	726
ScrFI	CCNGG	1 cut(s)	606
SduI	GDGCHC	2 cut(s)	99, 462
SfaNI	GCATC	4 cut(s)	95, 712, 846, 906
SmlI	CTYRAG	3 cut(s)	56, 320, 506
SmoI	CTYRAG	3 cut(s)	56, 320, 506
Sse9I	AATT	8 cut(s)	111, 227, 526, 646, 678, 752, 1048, 1177
SsiI	CCGC	2 cut(s)	16, 166
SspMI	CTAG	1 cut(s)	726
StyD4I	CCNGG	1 cut(s)	604
TaaI	ACNGT	2 cut(s)	240, 802
TaqI	TCGA	3 cut(s)	196, 841, 1086
TasI	AATT	8 cut(s)	111, 227, 526, 646, 678, 752, 1048, 1177
TatI	WGTACW	1 cut(s)	240
TfiI	GAWTC	1 cut(s)	1163
Tru1I	TTAA	5 cut(s)	117, 480, 489, 525, 1237
Tru9I	TTAA	5 cut(s)	117, 480, 489, 525, 1237
TscAI	CASTG	5 cut(s)	73, 586, 595, 774, 1213
TseFI	GTSAC	4 cut(s)	64, 352, 817, 1148
TseI	GCWGC	3 cut(s)	168, 341, 787
Tsp45I	GTSAC	4 cut(s)	64, 352, 817, 1148
TspDTI	ATGAA	2 cut(s)	38, 510
TspRI	CASTG	5 cut(s)	73, 586, 595, 774, 1213
VneI	GTGCAC	1 cut(s)	458
XapI	RAATTY	3 cut(s)	111, 752, 1048
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1016
XmnI	GAANNNNTTC	1 cut(s)	890
XspI	CTAG	1 cut(s)	726
Zsp2I	ATGCAT	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.