Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0008631

Physical Location & Seq

Genomic Coordinates Reverse (-)

13580082 .. 13583589

Gene Structure 3508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G148900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 963 bp

ATGGACGGCGAGGAGTTGACTGAGCAGGAGACTGCTCTTTACGATCGCCAAATTAGGGTTTGGGGCGCTGGTGCCCAGAGAAGACTGAGCAAAGCTCATATACTAGTCTGTGGAATTACTGGAACTATTGCTGAGTTTTGCAAGAATATTGTACTAGCCGGAGTTGGTAGTTTGACACTGGTTGATGATCGGGCTGTGACCGAAGAAGCGCTTTCTGCCAACTTTCTGATACCTTCTGATGAAAATGTGTGTGCCGGGAAAACTCTAACTGAACTTTGTCGTGATTCTCTGAAAGATTTCAATCCGATGGTTCGCGTTTCTGTAGAAAAAGGTGATTTGTCAAGCTTCGGAGCAGAGTTCTACAGTAAGTTTGATGTTGTCGTTGTCAGTTGTTGCTCCTTCACGACTAAAAAATTGATAAATGAAAAATGCCGAAAGTTATCAAAGCGTGTGGCATTTTATACAGTTGACTGTAGAGACTCTTGTGGTGAAATATTTGTTGATCTGCAACACCACAAATACTCGAAGCAAAAACGGGAGGAAACAATCGAATGCGAACTACATTATCCAAGTTTTGAGGAATCAATTTCAATACCTTGGAAAGCACTTCCCAGGAAATTCTCAAAACTATACTTTGCTATGCGAGTAATAGAAAGGTTTGAAGAAGTTGAGCAACGTAAACCTGGAGAATTATCAATTGCAGATCTTCCTGCTGTTGTGAAGTTGAAAAAGGAGCTCTGTGTGGCACAGTCATTGAACGAATCTCATATCCCAAATGTCCTCCTCGAAAGACTGGTGACTGATACAAGAGAATTTCCTCCAGTTTGTCCCATCATTGGGGGGATTCTCGGACAGGAGGTCATTAAGGCAATATCAGGCAAAGGAGACCCCCTCAAGAATTTCTTCTTCTTCGACGCTATGGATGGAAAGGGCATAATAGAGGACGTATCAGGGAAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0008641 GO:0009987 GO:0016874 GO:0016877 GO:0016925 GO:0018193 GO:0018205 GO:0019538 GO:0019948 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0070647 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

ThiF

Protein Analysis

321

Amino Acids

35.84

Weight (kDa)

5.73

Isoelectric Point (pI)

41.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008631)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24940 AT5G50580 AT5G50580 AT5G50680 AT5G50680
fragaria_vesca	FvH4_5g08600 FvH4_5g08600 FvH4_5g08600 FvH4_5g08600
malus_domestica	MD06G1138700.v1.1 MD14G1154700.v1.1
prunus_persica	Prupe.5G148900_v2.0.a1 Prupe.5G148900_v2.0.a1
pyrus_communis	pycom06g12980 pycom14g12870
rosa_chinensis	RchiOBHm_Chr7g0189801
rosa_laevigata	RLG00000004589
rosa_multiflora	Rmu_sc0014337.1_g000003
rosa_roxburghii	Rroxscaffold_3G00265150
rosa_rugosa	Rorug06G0500000
rosa_samantha	Rh7AG105100 Rh7CG109700
rosa_wichuraiana	Rw7G009100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	71
AccII	CGCG	1 cut(s)	315
AcsI	RAATTY	3 cut(s)	617, 812, 898
AfaI	GTAC	1 cut(s)	153
AfeI	AGCGCT	1 cut(s)	210
AfiI	CCNNNNNNNGG	3 cut(s)	55, 836, 837
AgsI	TTSAA	5 cut(s)	301, 591, 662, 727, 757
AhdI	GACNNNNNGTC	1 cut(s)	857
AhlI	ACTAGT	1 cut(s)	103
AjnI	CCWGG	2 cut(s)	611, 682
AluBI	AGCT	3 cut(s)	95, 345, 736
AluI	AGCT	3 cut(s)	95, 345, 736
Alw21I	GWGCWC	1 cut(s)	738
Alw26I	GTCTC	3 cut(s)	23, 471, 879
Aor51HI	AGCGCT	1 cut(s)	210
ApoI	RAATTY	3 cut(s)	617, 812, 898
Asp700I	GAANNNNTTC	2 cut(s)	296, 902
AspLEI	GCGC	2 cut(s)	68, 211
AsuC2I	CCSGG	1 cut(s)	256
AsuHPI	GGTGA	3 cut(s)	344, 500, 808
BaeGI	GKGCMC	1 cut(s)	76
BanI	GGYRCC	1 cut(s)	71
BanII	GRGCYC	1 cut(s)	738
BbsI	GAAGAC	1 cut(s)	88
Bbv12I	GWGCWC	1 cut(s)	738
BccI	CCATC	3 cut(s)	301, 839, 917
BceAI	ACGGC	1 cut(s)	22
BciT130I	CCWGG	2 cut(s)	613, 684
BcnI	CCSGG	1 cut(s)	256
BcoDI	GTCTC	3 cut(s)	23, 471, 879
BcuI	ACTAGT	1 cut(s)	103
BfaI	CTAG	2 cut(s)	104, 155
BfmI	CTRYAG	3 cut(s)	321, 361, 472
BfoI	RGCGCY	2 cut(s)	69, 212
BglII	AGATCT	1 cut(s)	703
Bme1390I	CCNGG	3 cut(s)	256, 613, 684
BmeRI	GACNNNNNGTC	1 cut(s)	857
BmiI	GGNNCC	1 cut(s)	73
BmrFI	CCNGG	3 cut(s)	256, 613, 684
BpiI	GAAGAC	1 cut(s)	88
BplI	GAGNNNNNCTC	4 cut(s)	79, 111, 876, 908
BpmI	CTGGAG	2 cut(s)	705, 804
BpuEI	CTTGAG	1 cut(s)	878
BpuMI	CCSGG	1 cut(s)	256
BsaBI	GATNNNNATC	1 cut(s)	300
BsaI	GGTCTC	1 cut(s)	879
BsaJI	CCNNGG	2 cut(s)	596, 611
Bsc4I	CCNNNNNNNGG	3 cut(s)	55, 836, 837
Bse1I	ACTGG	4 cut(s)	124, 183, 798, 821
Bse8I	GATNNNNATC	1 cut(s)	300
BseBI	CCWGG	2 cut(s)	613, 684
BseDI	CCNNGG	2 cut(s)	596, 611
BseGI	GGATG	1 cut(s)	928
BseJI	GATNNNNATC	1 cut(s)	300
BseLI	CCNNNNNNNGG	3 cut(s)	55, 836, 837
BseMII	CTCAG	3 cut(s)	12, 77, 123
BseNI	ACTGG	4 cut(s)	124, 183, 798, 821
BseRI	GAGGAG	2 cut(s)	26, 773
BseSI	GKGCMC	1 cut(s)	76
Bsh1236I	CGCG	1 cut(s)	315
Bsh1285I	CGRYCG	1 cut(s)	46
BshNI	GGYRCC	1 cut(s)	71
BsiEI	CGRYCG	1 cut(s)	46
BsiHKAI	GWGCWC	1 cut(s)	738
BsiSI	CCGG	2 cut(s)	159, 255
BslFI	GGGAC	1 cut(s)	813
BslI	CCNNNNNNNGG	3 cut(s)	55, 836, 837
BsmAI	GTCTC	3 cut(s)	23, 471, 879
BsmFI	GGGAC	1 cut(s)	813
BsmI	GAATGC	1 cut(s)	557
Bso31I	GGTCTC	1 cut(s)	879
Bsp1286I	GDGCHC	2 cut(s)	76, 738
Bsp143I	GATC	4 cut(s)	43, 187, 502, 703
BspCNI	CTCAG	3 cut(s)	13, 78, 124
BspFNI	CGCG	1 cut(s)	315
BspLI	GGNNCC	1 cut(s)	73
BspT107I	GGYRCC	1 cut(s)	71
BspTNI	GGTCTC	1 cut(s)	879
BsrI	ACTGG	4 cut(s)	124, 183, 798, 821
BssECI	CCNNGG	2 cut(s)	596, 611
BssMI	GATC	4 cut(s)	43, 187, 502, 703
BssT1I	CCWWGG	1 cut(s)	596
Bst2UI	CCWGG	2 cut(s)	613, 684
Bst4CI	ACNGT	4 cut(s)	365, 466, 473, 750
BstDEI	CTNAG	3 cut(s)	21, 86, 132
BstF5I	GGATG	1 cut(s)	928
BstFNI	CGCG	1 cut(s)	315
BstH2I	RGCGCY	2 cut(s)	69, 212
BstHHI	GCGC	2 cut(s)	68, 211
BstKTI	GATC	4 cut(s)	46, 190, 505, 706
BstMAI	GTCTC	3 cut(s)	23, 471, 879
BstMBI	GATC	4 cut(s)	43, 187, 502, 703
BstMCI	CGRYCG	1 cut(s)	46
BstMWI	GCNNNNNNNGC	1 cut(s)	215
BstNI	CCWGG	2 cut(s)	613, 684
BstSCI	CCNGG	3 cut(s)	254, 611, 682
BstSFI	CTRYAG	3 cut(s)	321, 361, 472
BstSLI	GKGCMC	1 cut(s)	76
BstUI	CGCG	1 cut(s)	315
BstV2I	GAAGAC	1 cut(s)	88
BstX2I	RGATCY	1 cut(s)	703
BstYI	RGATCY	1 cut(s)	703
BtsCI	GGATG	1 cut(s)	928
BtsIMutI	CAGTG	1 cut(s)	176
CfoI	GCGC	2 cut(s)	68, 211
CseI	GACGC	1 cut(s)	923
Csp6I	GTAC	1 cut(s)	152
CspCI	CAANNNNNGTGG	2 cut(s)	432, 467
CviJI	RGCY	6 cut(s)	95, 158, 194, 345, 736, 958
CviKI_1	RGCY	6 cut(s)	95, 158, 194, 345, 736, 958
CviQI	GTAC	1 cut(s)	152
DdeI	CTNAG	3 cut(s)	21, 86, 132
DpnI	GATC	4 cut(s)	45, 189, 504, 705
DpnII	GATC	4 cut(s)	43, 187, 502, 703
DriI	GACNNNNNGTC	1 cut(s)	857
Eam1105I	GACNNNNNGTC	1 cut(s)	857
Ecl136II	GAGCTC	1 cut(s)	736
Eco130I	CCWWGG	1 cut(s)	596
Eco24I	GRGCYC	1 cut(s)	738
Eco31I	GGTCTC	1 cut(s)	879
Eco47III	AGCGCT	1 cut(s)	210
Eco53kI	GAGCTC	1 cut(s)	736
EcoICRI	GAGCTC	1 cut(s)	736
EcoRII	CCWGG	2 cut(s)	611, 682
EcoT14I	CCWWGG	1 cut(s)	596
EcoT38I	GRGCYC	1 cut(s)	738
ErhI	CCWWGG	1 cut(s)	596
FaiI	YATR	8 cut(s)	99, 101, 462, 631, 641, 768, 920, 935
FalI	AAGNNNNNCTT	4 cut(s)	195, 227, 887, 919
FaqI	GGGAC	1 cut(s)	813
FokI	GGATG	1 cut(s)	935
FriOI	GRGCYC	1 cut(s)	738
FspBI	CTAG	2 cut(s)	104, 155
GlaI	GCGC	2 cut(s)	67, 210
GsuI	CTGGAG	2 cut(s)	705, 804
HaeII	RGCGCY	2 cut(s)	69, 212
HapII	CCGG	2 cut(s)	159, 255
HgaI	GACGC	1 cut(s)	923
HhaI	GCGC	2 cut(s)	68, 211
Hin6I	GCGC	2 cut(s)	66, 209
HinP1I	GCGC	2 cut(s)	66, 209
HincII	GTYRAC	2 cut(s)	18, 469
HindII	GTYRAC	2 cut(s)	18, 469
HindIII	AAGCTT	1 cut(s)	343
HinfI	GANTC	5 cut(s)	284, 479, 581, 761, 844
HpaII	CCGG	2 cut(s)	159, 255
HphI	GGTGA	3 cut(s)	344, 500, 808
Hpy166II	GTNNAC	3 cut(s)	18, 469, 680
Hpy188I	TCNGA	6 cut(s)	228, 238, 291, 306, 350, 851
Hpy188III	TCNNGA	3 cut(s)	281, 403, 895
Hpy8I	GTNNAC	3 cut(s)	18, 469, 680
Hpy99I	CGWCG	1 cut(s)	917
HpyAV	CCTTC	2 cut(s)	243, 409
HpyCH4III	ACNGT	4 cut(s)	365, 466, 473, 750
HpyCH4IV	ACGT	2 cut(s)	676, 945
HpyCH4V	TGCA	3 cut(s)	141, 508, 701
HpyF10VI	GCNNNNNNNGC	1 cut(s)	215
HpyF3I	CTNAG	3 cut(s)	21, 86, 132
HpySE526I	ACGT	2 cut(s)	676, 945
HspAI	GCGC	2 cut(s)	66, 209
Kzo9I	GATC	4 cut(s)	43, 187, 502, 703
LmnI	GCTCC	3 cut(s)	350, 401, 733
MaeI	CTAG	2 cut(s)	104, 155
MaeII	ACGT	2 cut(s)	676, 945
MaeIII	GTNAC	2 cut(s)	196, 796
MalI	GATC	4 cut(s)	45, 189, 504, 705
MboI	GATC	4 cut(s)	43, 187, 502, 703
MboII	GAAGA	7 cut(s)	93, 215, 674, 698, 895, 898, 901
MfeI	CAATTG	1 cut(s)	696
MflI	RGATCY	1 cut(s)	703
MhlI	GDGCHC	2 cut(s)	76, 738
MluCI	AATT	9 cut(s)	51, 114, 413, 585, 617, 689, 696, 812, 898
MlyI	GAGTC	1 cut(s)	473
MnlI	CCTC	9 cut(s)	4, 532, 571, 791, 794, 828, 850, 902, 934
MroXI	GAANNNNTTC	2 cut(s)	296, 902
MseI	TTAA	1 cut(s)	864
MspI	CCGG	2 cut(s)	159, 255
MspR9I	CCNGG	3 cut(s)	256, 613, 684
MunI	CAATTG	1 cut(s)	696
Mva1269I	GAATGC	1 cut(s)	557
MvaI	CCWGG	2 cut(s)	613, 684
MvnI	CGCG	1 cut(s)	315
MwoI	GCNNNNNNNGC	1 cut(s)	215
NciI	CCSGG	1 cut(s)	256
NdeII	GATC	4 cut(s)	43, 187, 502, 703
NlaIV	GGNNCC	1 cut(s)	73
NmuCI	GTSAC	2 cut(s)	196, 796
PctI	GAATGC	1 cut(s)	557
PdmI	GAANNNNTTC	2 cut(s)	296, 902
PfeI	GAWTC	4 cut(s)	284, 581, 761, 844
Ple19I	CGATCG	1 cut(s)	46
PleI	GAGTC	1 cut(s)	473
PpsI	GAGTC	1 cut(s)	473
Psp124BI	GAGCTC	1 cut(s)	738
Psp6I	CCWGG	2 cut(s)	611, 682
PspGI	CCWGG	2 cut(s)	611, 682
PspN4I	GGNNCC	1 cut(s)	73
PsuI	RGATCY	1 cut(s)	703
PvuI	CGATCG	1 cut(s)	46
RsaI	GTAC	1 cut(s)	153
RsaNI	GTAC	1 cut(s)	152
SacI	GAGCTC	1 cut(s)	738
SaqAI	TTAA	1 cut(s)	864
Sau3AI	GATC	4 cut(s)	43, 187, 502, 703
SchI	GAGTC	1 cut(s)	473
ScrFI	CCNGG	3 cut(s)	256, 613, 684
SduI	GDGCHC	2 cut(s)	76, 738
SfcI	CTRYAG	3 cut(s)	321, 361, 472
SmlI	CTYRAG	1 cut(s)	893
SmoI	CTYRAG	1 cut(s)	893
SpeI	ACTAGT	1 cut(s)	103
Sse9I	AATT	9 cut(s)	51, 114, 413, 585, 617, 689, 696, 812, 898
SspI	AATATT	2 cut(s)	148, 495
SspMI	CTAG	2 cut(s)	104, 155
SstI	GAGCTC	1 cut(s)	738
StyD4I	CCNGG	3 cut(s)	254, 611, 682
StyI	CCWWGG	1 cut(s)	596
TaaI	ACNGT	4 cut(s)	365, 466, 473, 750
TaiI	ACGT	2 cut(s)	679, 948
TaqI	TCGA	4 cut(s)	524, 549, 786, 912
TaqII	GACCGA	1 cut(s)	215
TasI	AATT	9 cut(s)	51, 114, 413, 585, 617, 689, 696, 812, 898
TatI	WGTACW	1 cut(s)	151
TfiI	GAWTC	4 cut(s)	284, 581, 761, 844
Tru1I	TTAA	1 cut(s)	864
Tru9I	TTAA	1 cut(s)	864
TscAI	CASTG	1 cut(s)	183
TseFI	GTSAC	2 cut(s)	196, 796
Tsp45I	GTSAC	2 cut(s)	196, 796
TspDTI	ATGAA	2 cut(s)	255, 438
TspRI	CASTG	1 cut(s)	183
XapI	RAATTY	3 cut(s)	617, 812, 898
XmnI	GAANNNNTTC	2 cut(s)	296, 902
XspI	CTAG	2 cut(s)	104, 155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.