Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007507

Physical Location & Seq

Genomic Coordinates Reverse (-)

14865783 .. 14869868

Gene Structure 4086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G174600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGAAGAATTTTCACTGGTTTAAGCAGATTTCCAACAATGGCAAACCTGAGAGGAGGCTCTCTCTTGGAGAGTACAACAGGGCAGTGTCATGGTCAAAGTATTTGGTGTCTTCAGGGGCTGAGATTAAGGGTGAAGGGGAGGAGGAGTGGAGTGCTGACATGTCCCAATTGTACATTGGGTGTAAATTTGCTTCAGGGAGACACAGTAGGATTTACAGAGGGGTTTATAAGCAGAGGGATGTGGCAATTAAGCTCATAAGCCAGCCTGAGGAGGATGAAGGCTTGGCTGTTTTGCTTGAGAAGCAGTTCACTTCTGAGGTGGCTTTGCTCTTTCGGCTGCACCATCCAAATATCATCTCTTTTGTTGCAGCTTGTAAGAAACCTCCTGTTTTCTGCATTATCACTGAGTATTTGTGCGGGGGATCGTTGAGAAAATATCTACATCAGCAGGAGCCACATTCTGTTCCACTCAGCCTAGTTGTGAAGCTAGCCCTCGACATTGCACGTGGGATGCAATATCTCCATTCTCAAAGTATACTTCATAGGGATCTCAAGTCAGAAAATCTATTGCTAGGGGAAGATATGTCTGTGAAAGTTGCAGATTTTGGCATCTCATGCTTAGAATCACAGTGCGGCAGTGCAAAGGGATTCACGGGCACTTACCGTTGGATGGCACCTGAAATGATCAAAGAGAAACACCATACGAAGAAAGTTGATGTTTACAGTTTTGGCATAGTTCTTTGGGAGCTTTTAACAGCATTGACACCATTTGACAACATGACTCCTGAACAGGCTGCATTTGCAGTATCACAGAAGAATGCAAGACCCCCTTTGCCATCCACATGCCCGACGGCATTCAGTCGTCTCATCAGCAGATGCTGGTCAACTCATCCAGACAAGCGACCTCATTTCGATGAGATAGTTCACATATTGGAAAGTTATGCAGAGTCCCTTGAGCAAGACCCAGATTTTTTCTCATCTTACAAGCCTCCTTCAGATCACACCCTTTTGCGATGCTTTCCAAAATGGATCGGTCGCCATAGATCCGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

352

Amino Acids

39.98

Weight (kDa)

8.47

Isoelectric Point (pI)

47.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007507)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g05240 FvH4_5g05240 FvH4_5g05240
malus_domestica	MD06G1175200.v1.1 MD14G1182000.v1.1
prunus_persica	Prupe.5G174600_v2.0.a1 Prupe.5G174600_v2.0.a1 Prupe.5G174600_v2.0.a1 Prupe.5G174600_v2.0.a1 Prupe.5G174600_v2.0.a1 Prupe.5G174600_v2.0.a1
pyrus_communis	pycom06g15600 pycom14g15100
rosa_chinensis	RchiOBHm_Chr7g0193661
rosa_laevigata	RLG00000004253
rosa_multiflora	Rmu_sc0001436.1_g000007
rosa_roxburghii	Rroxscaffold_3G00261930
rosa_rugosa	Rorug07G0011200 Rorug07G0011300 Rorug07G0011300
rosa_samantha	Rh7AG137900 Rh7BG138100 Rh7CG141800 Rh7DG139200
rosa_wichuraiana	Rw7G011740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	228
AccB1I	GGYRCC	1 cut(s)	673
AccI	GTMKAC	1 cut(s)	535
AciI	CCGC	3 cut(s)	417, 633, 1047
AclWI	GGATC	4 cut(s)	430, 555, 1037, 1038
AcsI	RAATTY	2 cut(s)	7, 185
AcuI	CTGAAG	3 cut(s)	96, 177, 978
AcvI	CACGTG	1 cut(s)	506
AfaI	GTAC	2 cut(s)	74, 173
AfiI	CCNNNNNNNGG	2 cut(s)	268, 670
AflIII	ACRYGT	1 cut(s)	159
AluBI	AGCT	4 cut(s)	253, 371, 487, 748
AluI	AGCT	4 cut(s)	253, 371, 487, 748
Alw26I	GTCTC	2 cut(s)	193, 869
AlwI	GGATC	4 cut(s)	430, 555, 1037, 1038
AlwNI	CAGNNNCTG	2 cut(s)	119, 879
ApeKI	GCWGC	3 cut(s)	337, 368, 794
ApoI	RAATTY	2 cut(s)	7, 185
Asp700I	GAANNNNTTC	1 cut(s)	305
AsuHPI	GGTGA	1 cut(s)	143
AsuNHI	GCTAGC	1 cut(s)	487
AxyI	CCTNAGG	1 cut(s)	267
BaeGI	GKGCMC	1 cut(s)	659
BanI	GGYRCC	1 cut(s)	673
BarI	GAAGNNNNNNTAC	2 cut(s)	175, 207
BbrPI	CACGTG	1 cut(s)	506
BbsI	GAAGAC	1 cut(s)	102
BbvI	GCAGC	3 cut(s)	324, 380, 781
BccI	CCATC	3 cut(s)	351, 664, 844
BceAI	ACGGC	1 cut(s)	867
BclI	TGATCA	1 cut(s)	684
BcoDI	GTCTC	2 cut(s)	193, 869
BfaI	CTAG	3 cut(s)	476, 488, 572
BisI	GCNGC	4 cut(s)	338, 369, 634, 795
BlsI	GCNGC	4 cut(s)	339, 370, 635, 796
BmiI	GGNNCC	2 cut(s)	453, 675
BmsI	GCATC	4 cut(s)	501, 618, 866, 1004
BmtI	GCTAGC	1 cut(s)	491
BpiI	GAAGAC	1 cut(s)	102
BplI	GAGNNNNNCTC	2 cut(s)	46, 78
BpuEI	CTTGAG	3 cut(s)	317, 536, 974
BsaAI	YACGTR	1 cut(s)	506
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 190, 220
Bsc4I	CCNNNNNNNGG	2 cut(s)	268, 670
Bse1I	ACTGG	1 cut(s)	20
Bse21I	CCTNAGG	1 cut(s)	267
Bse3DI	GCAATG	1 cut(s)	498
BseGI	GGATG	7 cut(s)	244, 280, 343, 516, 675, 836, 889
BseLI	CCNNNNNNNGG	2 cut(s)	268, 670
BseMI	GCAATG	1 cut(s)	498
BseMII	CTCAG	6 cut(s)	39, 111, 258, 306, 396, 484
BseNI	ACTGG	1 cut(s)	20
BseRI	GAGGAG	4 cut(s)	67, 155, 158, 284
BseSI	GKGCMC	1 cut(s)	659
BseXI	GCAGC	3 cut(s)	324, 380, 781
BsgI	GTGCAG	1 cut(s)	323
Bsh1285I	CGRYCG	1 cut(s)	1036
BshNI	GGYRCC	1 cut(s)	673
BsiEI	CGRYCG	1 cut(s)	1036
BslFI	GGGAC	2 cut(s)	148, 934
BslI	CCNNNNNNNGG	2 cut(s)	268, 670
BsmAI	GTCTC	2 cut(s)	193, 869
BsmBI	CGTCTC	1 cut(s)	869
BsmFI	GGGAC	2 cut(s)	148, 934
BsmI	GAATGC	2 cut(s)	823, 854
Bsp1286I	GDGCHC	1 cut(s)	659
Bsp1407I	TGTACA	1 cut(s)	171
Bsp143I	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
BspACI	CCGC	3 cut(s)	417, 633, 1047
BspCNI	CTCAG	6 cut(s)	40, 112, 259, 307, 397, 483
BspLI	GGNNCC	2 cut(s)	453, 675
BspOI	GCTAGC	1 cut(s)	491
BspPI	GGATC	4 cut(s)	430, 555, 1037, 1038
BspT107I	GGYRCC	1 cut(s)	673
BsrDI	GCAATG	1 cut(s)	498
BsrGI	TGTACA	1 cut(s)	171
BsrI	ACTGG	1 cut(s)	20
BssMI	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
BssNAI	GTATAC	1 cut(s)	536
Bst1107I	GTATAC	1 cut(s)	536
Bst4CI	ACNGT	4 cut(s)	206, 630, 665, 725
BstAPI	GCANNNNNTGC	1 cut(s)	615
BstAUI	TGTACA	1 cut(s)	171
BstBAI	YACGTR	1 cut(s)	506
BstC8I	GCNNGC	2 cut(s)	263, 489
BstDEI	CTNAG	7 cut(s)	48, 120, 267, 315, 405, 470, 619
BstF5I	GGATG	7 cut(s)	244, 280, 343, 516, 675, 836, 889
BstKTI	GATC	6 cut(s)	425, 550, 687, 1000, 1032, 1046
BstMAI	GTCTC	2 cut(s)	193, 869
BstMBI	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
BstMCI	CGRYCG	1 cut(s)	1036
BstMWI	GCNNNNNNNGC	4 cut(s)	301, 334, 615, 800
BstNSI	RCATGY	2 cut(s)	163, 846
BstSLI	GKGCMC	1 cut(s)	659
BstV1I	GCAGC	3 cut(s)	324, 380, 781
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	2 cut(s)	547, 1043
BstYI	RGATCY	2 cut(s)	547, 1043
BstZ17I	GTATAC	1 cut(s)	536
Bsu36I	CCTNAGG	1 cut(s)	267
BtgZI	GCGATG	1 cut(s)	1027
BtsCI	GGATG	7 cut(s)	244, 280, 343, 516, 675, 836, 889
BtsI	GCAGTG	2 cut(s)	90, 643
BtsIMutI	CAGTG	5 cut(s)	13, 90, 402, 635, 643
Cac8I	GCNNGC	2 cut(s)	263, 489
CaiI	CAGNNNCTG	2 cut(s)	119, 879
Csp6I	GTAC	2 cut(s)	73, 172
CviAII	CATG	5 cut(s)	90, 160, 615, 778, 843
CviQI	GTAC	2 cut(s)	73, 172
DdeI	CTNAG	7 cut(s)	48, 120, 267, 315, 405, 470, 619
DpnI	GATC	6 cut(s)	424, 549, 686, 999, 1031, 1045
DpnII	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
Eco57I	CTGAAG	3 cut(s)	96, 177, 978
Eco72I	CACGTG	1 cut(s)	506
Eco81I	CCTNAGG	1 cut(s)	267
Esp3I	CGTCTC	1 cut(s)	869
FaeI	CATG	5 cut(s)	93, 163, 618, 781, 846
FalI	AAGNNNNNCTT	2 cut(s)	814, 846
FaqI	GGGAC	2 cut(s)	148, 934
FatI	CATG	5 cut(s)	89, 159, 614, 777, 842
FauI	CCCGC	1 cut(s)	410
FbaI	TGATCA	1 cut(s)	684
FblI	GTMKAC	1 cut(s)	535
Fnu4HI	GCNGC	4 cut(s)	338, 369, 634, 795
FokI	GGATG	7 cut(s)	251, 287, 330, 523, 682, 823, 876
Fsp4HI	GCNGC	4 cut(s)	338, 369, 634, 795
FspBI	CTAG	3 cut(s)	476, 488, 572
GluI	GCNGC	4 cut(s)	338, 369, 634, 795
Hin1II	CATG	5 cut(s)	93, 163, 618, 781, 846
HincII	GTYRAC	1 cut(s)	885
HindII	GTYRAC	1 cut(s)	885
HinfI	GANTC	4 cut(s)	623, 648, 781, 947
HphI	GGTGA	1 cut(s)	143
Hpy166II	GTNNAC	5 cut(s)	309, 536, 721, 885, 925
Hpy188I	TCNGA	3 cut(s)	316, 559, 997
Hpy188III	TCNNGA	3 cut(s)	785, 893, 1053
Hpy8I	GTNNAC	5 cut(s)	309, 536, 721, 885, 925
Hpy99I	CGWCG	1 cut(s)	853
HpyAV	CCTTC	3 cut(s)	128, 272, 1002
HpyCH4III	ACNGT	4 cut(s)	206, 630, 665, 725
HpyCH4IV	ACGT	1 cut(s)	505
HpyF10VI	GCNNNNNNNGC	4 cut(s)	301, 334, 615, 800
HpyF3I	CTNAG	7 cut(s)	48, 120, 267, 315, 405, 470, 619
HpySE526I	ACGT	1 cut(s)	505
Hsp92II	CATG	5 cut(s)	93, 163, 618, 781, 846
Ksp22I	TGATCA	1 cut(s)	684
Kzo9I	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
LmnI	GCTCC	2 cut(s)	451, 745
Lsp1109I	GCAGC	3 cut(s)	324, 380, 781
LweI	GCATC	4 cut(s)	501, 618, 866, 1004
MaeI	CTAG	3 cut(s)	476, 488, 572
MaeII	ACGT	1 cut(s)	505
MalI	GATC	6 cut(s)	424, 549, 686, 999, 1031, 1045
MboI	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
MboII	GAAGA	5 cut(s)	16, 102, 590, 718, 826
MfeI	CAATTG	1 cut(s)	167
MflI	RGATCY	2 cut(s)	547, 1043
MhlI	GDGCHC	1 cut(s)	659
MluCI	AATT	4 cut(s)	7, 167, 185, 246
MlyI	GAGTC	2 cut(s)	775, 956
MmeI	TCCRAC	2 cut(s)	57, 647
MroXI	GAANNNNTTC	1 cut(s)	305
MseI	TTAA	4 cut(s)	21, 126, 249, 752
MslI	CAYNNNNRTG	2 cut(s)	841, 912
MunI	CAATTG	1 cut(s)	167
Mva1269I	GAATGC	2 cut(s)	823, 854
MwoI	GCNNNNNNNGC	4 cut(s)	301, 334, 615, 800
NdeII	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
NheI	GCTAGC	1 cut(s)	487
NlaIII	CATG	5 cut(s)	93, 163, 618, 781, 846
NlaIV	GGNNCC	2 cut(s)	453, 675
NspI	RCATGY	2 cut(s)	163, 846
PciI	ACATGT	1 cut(s)	159
PctI	GAATGC	2 cut(s)	823, 854
PdmI	GAANNNNTTC	1 cut(s)	305
PfeI	GAWTC	2 cut(s)	623, 648
PkrI	GCNGC	4 cut(s)	339, 370, 635, 796
PleI	GAGTC	2 cut(s)	775, 955
PmaCI	CACGTG	1 cut(s)	506
PmlI	CACGTG	1 cut(s)	506
PpsI	GAGTC	2 cut(s)	775, 955
Ppu21I	YACGTR	1 cut(s)	506
PscI	ACATGT	1 cut(s)	159
PsiI	TTATAA	1 cut(s)	228
PspCI	CACGTG	1 cut(s)	506
PspN4I	GGNNCC	2 cut(s)	453, 675
PstNI	CAGNNNCTG	2 cut(s)	119, 879
PsuI	RGATCY	2 cut(s)	547, 1043
RsaI	GTAC	2 cut(s)	74, 173
RsaNI	GTAC	2 cut(s)	73, 172
RseI	CAYNNNNRTG	2 cut(s)	841, 912
SaqAI	TTAA	4 cut(s)	21, 126, 249, 752
SatI	GCNGC	4 cut(s)	338, 369, 634, 795
Sau3AI	GATC	6 cut(s)	422, 547, 684, 997, 1029, 1043
SchI	GAGTC	2 cut(s)	775, 956
SduI	GDGCHC	1 cut(s)	659
SfaNI	GCATC	4 cut(s)	501, 618, 866, 1004
SmiMI	CAYNNNNRTG	2 cut(s)	841, 912
SmlI	CTYRAG	3 cut(s)	296, 551, 953
SmoI	CTYRAG	3 cut(s)	296, 551, 953
Sse9I	AATT	4 cut(s)	7, 167, 185, 246
SsiI	CCGC	3 cut(s)	417, 633, 1047
SspMI	CTAG	3 cut(s)	476, 488, 572
TaaI	ACNGT	4 cut(s)	206, 630, 665, 725
TaiI	ACGT	1 cut(s)	508
TaqI	TCGA	2 cut(s)	495, 912
TaqII	GACCGA	1 cut(s)	1022
TasI	AATT	4 cut(s)	7, 167, 185, 246
TatI	WGTACW	2 cut(s)	72, 171
TauI	GCSGC	1 cut(s)	636
TfiI	GAWTC	2 cut(s)	623, 648
Tru1I	TTAA	4 cut(s)	21, 126, 249, 752
Tru9I	TTAA	4 cut(s)	21, 126, 249, 752
TscAI	CASTG	5 cut(s)	20, 90, 409, 635, 643
TseI	GCWGC	3 cut(s)	337, 368, 794
TspDTI	ATGAA	3 cut(s)	17, 291, 530
TspRI	CASTG	5 cut(s)	20, 90, 409, 635, 643
XapI	RAATTY	2 cut(s)	7, 185
XceI	RCATGY	2 cut(s)	163, 846
XcmI	CCANNNNNNNNNTGG	1 cut(s)	173
XmiI	GTMKAC	1 cut(s)	535
XmnI	GAANNNNTTC	1 cut(s)	305
XspI	CTAG	3 cut(s)	476, 488, 572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.