Prupe.5G180700_v2.0.a1

Lipase (class 3)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15151810 .. 15153073
1264 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G180700.1

Sequence Viewer

Length: 1179 bp
ATGGCTGCGCTTGCCACAATCCGGTTCTTGGAAAAGTTCCCCAATGCGGATAGTGGAACGTTTTTCTGTGCGACTTTCGGATCTCCCCTTGTTGGTAACCGTATTATTTCTCATGCTCTTAGGAGAGAGAACTGGTCCAAAGACTTAATAAATTCTGTCATGAGATATGACATTGTCCCCCGGATTTTGCTTGCTCCTCTCTCCTCCATTCAACAACAGTTTGAGAAAATTCTCCCCTTCTTCGATCCGAAATGGTCAAACTTTAAAAGTGAGATTCCTGGAACAGCCCCAGAGGCGTTGCATCTCTATACAAATGTGATGAGGAATGCATCAGCTCTTACAAGCCATGATGCCTCTCAGCTAATGGGGAGCACAAATCTATTACTGGAAACTGTAAAACACTTCATTAAGCTAAGCCCTTACAAGCCTTTTGGAACATATGTTTTTTGCACTGGGAATGGTAAATTGGTTGTCTTGAAAAACCCTGAAGCTGTGTTGCAAACCTTGTTCTACTCTTGTCAGTTAAGTAGTGAAACGGAACGGGCAGCCCTTGCCCACAAATGCTTGGACATGCAAAATGTGGTTGAGGTTGATAAACTAGAAGAGCTCTGCTTAGGCTCAGATGGTTACTTGGATGACCTTGGCTTGGTACTCGAAGATCTCTTTGTTCTGATTGTTTTTCTATTTTGTGTTCCAAAATTGAGAATCAGAGAAGCAAAAACGAGTAAACCAGGAAAAGATTGGTCGAAAATGGAAGAAATGACAAAGCTAGAAGACCACCGAGCCTTGTGTGAGCACAATAGGGGATATTATGACGCCTTCAAGATTTCGAATGACACGAGAGACTCGGATCCTAATGTATATGGGATGAAATTATTCAAAATGCTGAGAAAATATGAGCTTCCTGATGAATTTGAGGCTATAAAAAAGTGGATACAATTAGGAACCAGGTATCCCCACCTTGTTGGGCCTCTTGATATTGCTAACTATTATAGACACTCAAGGGGTGAACTCACCAGGCGTTACATGAAAAAGGGCGGCAGGCCAAAGCTTTACAAATACACACAAAGATGGCTGGAGCATTACCAAAAGTTGCAAATAGGAACCTGTGGGGAATCCTGCTTTTGGGCAGAGGTGGAGGAGTTACTCAAACAAACTCAAAGCGCGGAAGCAATCTAA

Protein Analysis

393

Amino Acids

45.08

Weight (kDa)

8.42

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1166
AciI CCGC 3 cut(s) 47, 1038, 1166
AclI AACGTT 1 cut(s) 59
AclWI GGATC 4 cut(s) 88, 239, 845, 858
AcsI RAATTY 3 cut(s) 151, 228, 911
AcuI CTGAAG 1 cut(s) 507
AcyI GRCGYC 1 cut(s) 816
AfaI GTAC 1 cut(s) 651
AfiI CCNNNNNNNGG 6 cut(s) 21, 28, 46, 92, 646, 1125
AgsI TTSAA 4 cut(s) 212, 478, 823, 880
AjnI CCWGG 4 cut(s) 277, 730, 947, 1016
AjuI GAANNNNNNNTTGG 2 cut(s) 449, 481
AloI GAACNNNNNNTCC 2 cut(s) 937, 969
AluBI AGCT 8 cut(s) 335, 361, 412, 491, 607, 769, 901, 1051
AluI AGCT 8 cut(s) 335, 361, 412, 491, 607, 769, 901, 1051
Alw21I GWGCWC 3 cut(s) 374, 609, 798
Alw26I GTCTC 1 cut(s) 837
AlwI GGATC 4 cut(s) 88, 239, 845, 858
AoxI GGCC 2 cut(s) 968, 1043
ApeKI GCWGC 2 cut(s) 5, 545
ApoI RAATTY 3 cut(s) 151, 228, 911
Asp700I GAANNNNTTC 1 cut(s) 875
AspLEI GCGC 2 cut(s) 10, 1166
AspS9I GGNCC 2 cut(s) 135, 968
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 2 cut(s) 1006, 1019
AsuII TTCGAA 1 cut(s) 830
AvaII GGWCC 1 cut(s) 135
BamHI GGATCC 1 cut(s) 850
BanII GRGCYC 1 cut(s) 609
BauI CACGAG 1 cut(s) 838
BbsI GAAGAC 1 cut(s) 780
Bbv12I GWGCWC 3 cut(s) 374, 609, 798
BbvI GCAGC 1 cut(s) 557
BccI CCATC 2 cut(s) 617, 1065
BciT130I CCWGG 4 cut(s) 279, 732, 949, 1018
BciVI GTATCC 2 cut(s) 927, 963
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 1 cut(s) 837
BfaI CTAG 2 cut(s) 599, 770
BfuI GTATCC 2 cut(s) 927, 963
BglI GCCNNNNNGGC 1 cut(s) 293
BglII AGATCT 1 cut(s) 658
BisI GCNGC 3 cut(s) 6, 546, 1039
BlpI GCTNAGC 1 cut(s) 413
BlsI GCNGC 3 cut(s) 7, 547, 1040
Bme1390I CCNGG 5 cut(s) 181, 279, 732, 949, 1018
Bme18I GGWCC 1 cut(s) 135
BmgT120I GGNCC 2 cut(s) 135, 968
BmiI GGNNCC 3 cut(s) 852, 946, 1105
BmrFI CCNGG 5 cut(s) 181, 279, 732, 949, 1018
BmrI ACTGGG 1 cut(s) 462
BmsI GCATC 3 cut(s) 310, 338, 340
BmuI ACTGGG 1 cut(s) 462
BpiI GAAGAC 1 cut(s) 780
BpmI CTGGAG 1 cut(s) 1097
Bpu10I CCTNAGC 1 cut(s) 613
Bpu1102I GCTNAGC 1 cut(s) 413
Bpu14I TTCGAA 1 cut(s) 830
BpuEI CTTGAG 1 cut(s) 985
BpuMI CCSGG 1 cut(s) 181
BsaHI GRCGYC 1 cut(s) 816
BsaJI CCNNGG 2 cut(s) 179, 640
BsaWI WCCGGW 1 cut(s) 21
Bsc4I CCNNNNNNNGG 6 cut(s) 21, 28, 46, 92, 646, 1125
Bse1I ACTGG 3 cut(s) 137, 390, 457
BseBI CCWGG 4 cut(s) 279, 732, 949, 1018
BseDI CCNNGG 2 cut(s) 179, 640
BseGI GGATG 2 cut(s) 640, 873
BseLI CCNNNNNNNGG 6 cut(s) 21, 28, 46, 92, 646, 1125
BseMII CTCAG 3 cut(s) 371, 633, 878
BseNI ACTGG 3 cut(s) 137, 390, 457
BseRI GAGGAG 3 cut(s) 186, 193, 1154
BseXI GCAGC 1 cut(s) 557
Bsh1236I CGCG 1 cut(s) 1166
BshFI GGCC 2 cut(s) 970, 1045
BsiHKAI GWGCWC 3 cut(s) 374, 609, 798
BsiSI CCGG 2 cut(s) 22, 181
BslFI GGGAC 1 cut(s) 161
BslI CCNNNNNNNGG 6 cut(s) 21, 28, 46, 92, 646, 1125
BsmAI GTCTC 1 cut(s) 837
BsmFI GGGAC 1 cut(s) 161
BsmI GAATGC 1 cut(s) 331
BsnI GGCC 2 cut(s) 970, 1045
Bsp119I TTCGAA 1 cut(s) 830
Bsp1286I GDGCHC 3 cut(s) 374, 609, 798
Bsp143I GATC 4 cut(s) 80, 244, 658, 850
Bsp1720I GCTNAGC 1 cut(s) 413
BspACI CCGC 3 cut(s) 47, 1038, 1166
BspANI GGCC 2 cut(s) 970, 1045
BspCNI CTCAG 3 cut(s) 370, 632, 879
BspFNI CGCG 1 cut(s) 1166
BspHI TCATGA 1 cut(s) 159
BspLI GGNNCC 3 cut(s) 852, 946, 1105
BspPI GGATC 4 cut(s) 88, 239, 845, 858
BspQI GCTCTTC 1 cut(s) 597
BspT104I TTCGAA 1 cut(s) 830
BsrI ACTGG 3 cut(s) 137, 390, 457
BssECI CCNNGG 2 cut(s) 179, 640
BssMI GATC 4 cut(s) 80, 244, 658, 850
BssNI GRCGYC 1 cut(s) 816
BssSI CACGAG 1 cut(s) 838
BssT1I CCWWGG 1 cut(s) 640
Bst2BI CACGAG 1 cut(s) 838
Bst2UI CCWGG 4 cut(s) 279, 732, 949, 1018
Bst4CI ACNGT 3 cut(s) 101, 219, 394
Bst6I CTCTTC 1 cut(s) 597
BstACI GRCGYC 1 cut(s) 816
BstAPI GCANNNNNTGC 1 cut(s) 551
BstBI TTCGAA 1 cut(s) 830
BstC8I GCNNGC 3 cut(s) 12, 192, 1043
BstDEI CTNAG 6 cut(s) 119, 357, 413, 613, 619, 887
BstEII GGTNACC 1 cut(s) 95
BstF5I GGATG 2 cut(s) 640, 873
BstFNI CGCG 1 cut(s) 1166
BstHHI GCGC 2 cut(s) 10, 1166
BstKTI GATC 4 cut(s) 83, 247, 661, 853
BstMAI GTCTC 1 cut(s) 837
BstMBI GATC 4 cut(s) 80, 244, 658, 850
BstMWI GCNNNNNNNGC 3 cut(s) 11, 293, 551
BstNI CCWGG 4 cut(s) 279, 732, 949, 1018
BstNSI RCATGY 1 cut(s) 574
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 5 cut(s) 179, 277, 730, 947, 1016
BstUI CGCG 1 cut(s) 1166
BstV1I GCAGC 1 cut(s) 557
BstV2I GAAGAC 1 cut(s) 780
BstX2I RGATCY 3 cut(s) 80, 658, 850
BstXI CCANNNNNNTGG 1 cut(s) 965
BstYI RGATCY 3 cut(s) 80, 658, 850
BsuI GTATCC 2 cut(s) 927, 963
BsuRI GGCC 2 cut(s) 970, 1045
BtsCI GGATG 2 cut(s) 640, 873
BtsIMutI CAGTG 1 cut(s) 450
Cac8I GCNNGC 3 cut(s) 12, 192, 1043
CciI TCATGA 1 cut(s) 159
CfoI GCGC 2 cut(s) 10, 1166
Cfr13I GGNCC 2 cut(s) 135, 968
CseI GACGC 1 cut(s) 824
CsiI ACCWGGT 1 cut(s) 947
Csp6I GTAC 1 cut(s) 650
CviAII CATG 5 cut(s) 113, 160, 347, 571, 1027
CviQI GTAC 1 cut(s) 650
DdeI CTNAG 6 cut(s) 119, 357, 413, 613, 619, 887
DpnI GATC 4 cut(s) 82, 246, 660, 852
DpnII GATC 4 cut(s) 80, 244, 658, 850
DraI TTTAAA 1 cut(s) 265
Eam1104I CTCTTC 1 cut(s) 597
EarI CTCTTC 1 cut(s) 597
Ecl136II GAGCTC 1 cut(s) 607
Eco130I CCWWGG 1 cut(s) 640
Eco24I GRGCYC 1 cut(s) 609
Eco47I GGWCC 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 607
Eco57I CTGAAG 1 cut(s) 507
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 607
EcoO65I GGTNACC 1 cut(s) 95
EcoRII CCWGG 4 cut(s) 277, 730, 947, 1016
EcoT14I CCWWGG 1 cut(s) 640
EcoT22I ATGCAT 1 cut(s) 331
EcoT38I GRGCYC 1 cut(s) 609
ErhI CCWWGG 1 cut(s) 640
FaeI CATG 5 cut(s) 116, 163, 350, 574, 1030
FaqI GGGAC 1 cut(s) 161
FatI CATG 5 cut(s) 112, 159, 346, 570, 1026
FauNDI CATATG 1 cut(s) 439
Fnu4HI GCNGC 3 cut(s) 6, 546, 1039
FokI GGATG 2 cut(s) 647, 880
FriOI GRGCYC 1 cut(s) 609
Fsp4HI GCNGC 3 cut(s) 6, 546, 1039
FspBI CTAG 2 cut(s) 599, 770
GlaI GCGC 2 cut(s) 9, 1165
GluI GCNGC 3 cut(s) 6, 546, 1039
GsuI CTGGAG 1 cut(s) 1097
HaeIII GGCC 2 cut(s) 970, 1045
HapII CCGG 2 cut(s) 22, 181
HgaI GACGC 1 cut(s) 824
HhaI GCGC 2 cut(s) 10, 1166
Hin1I GRCGYC 1 cut(s) 816
Hin1II CATG 5 cut(s) 116, 163, 350, 574, 1030
Hin6I GCGC 2 cut(s) 8, 1164
HinP1I GCGC 2 cut(s) 8, 1164
HindIII AAGCTT 1 cut(s) 1049
HinfI GANTC 4 cut(s) 274, 705, 845, 1115
HpaII CCGG 2 cut(s) 22, 181
HphI GGTGA 2 cut(s) 1006, 1019
Hpy166II GTNNAC 2 cut(s) 728, 1010
Hpy188I TCNGA 6 cut(s) 80, 249, 622, 672, 710, 850
Hpy188III TCNNGA 5 cut(s) 160, 475, 823, 905, 974
Hpy8I GTNNAC 2 cut(s) 728, 1010
HpyAV CCTTC 2 cut(s) 247, 829
HpyCH4III ACNGT 3 cut(s) 101, 219, 394
HpyCH4IV ACGT 1 cut(s) 59
HpyCH4V TGCA 6 cut(s) 301, 329, 450, 499, 574, 1096
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 293, 551
HpyF3I CTNAG 6 cut(s) 119, 357, 413, 613, 619, 887
HpySE526I ACGT 1 cut(s) 59
Hsp92I GRCGYC 1 cut(s) 816
Hsp92II CATG 5 cut(s) 116, 163, 350, 574, 1030
HspAI GCGC 2 cut(s) 8, 1164
Kzo9I GATC 4 cut(s) 80, 244, 658, 850
LguI GCTCTTC 1 cut(s) 597
LmnI GCTCC 3 cut(s) 199, 369, 1078
Lsp1109I GCAGC 1 cut(s) 557
LweI GCATC 3 cut(s) 310, 338, 340
MabI ACCWGGT 1 cut(s) 947
MaeI CTAG 2 cut(s) 599, 770
MaeII ACGT 1 cut(s) 59
MaeIII GTNAC 4 cut(s) 95, 626, 1022, 1143
MalI GATC 4 cut(s) 82, 246, 660, 852
MboI GATC 4 cut(s) 80, 244, 658, 850
MboII GAAGA 5 cut(s) 232, 614, 668, 767, 785
MflI RGATCY 3 cut(s) 80, 658, 850
MhlI GDGCHC 3 cut(s) 374, 609, 798
MluCI AATT 7 cut(s) 151, 228, 464, 698, 872, 911, 938
MlyI GAGTC 1 cut(s) 839
Mph1103I ATGCAT 1 cut(s) 331
MroXI GAANNNNTTC 1 cut(s) 875
MseI TTAA 4 cut(s) 146, 264, 408, 524
MslI CAYNNNNRTG 1 cut(s) 1069
MspI CCGG 2 cut(s) 22, 181
MspR9I CCNGG 5 cut(s) 181, 279, 732, 949, 1018
Mva1269I GAATGC 1 cut(s) 331
MvaI CCWGG 4 cut(s) 279, 732, 949, 1018
MvnI CGCG 1 cut(s) 1166
MwoI GCNNNNNNNGC 3 cut(s) 11, 293, 551
NciI CCSGG 1 cut(s) 181
NdeI CATATG 1 cut(s) 439
NdeII GATC 4 cut(s) 80, 244, 658, 850
NlaIII CATG 5 cut(s) 116, 163, 350, 574, 1030
NlaIV GGNNCC 3 cut(s) 852, 946, 1105
NsiI ATGCAT 1 cut(s) 331
NspI RCATGY 1 cut(s) 574
NspV TTCGAA 1 cut(s) 830
PagI TCATGA 1 cut(s) 159
PciSI GCTCTTC 1 cut(s) 597
PcsI WCGNNNNNNNCGW 1 cut(s) 836
PctI GAATGC 1 cut(s) 331
PdmI GAANNNNTTC 1 cut(s) 875
PfeI GAWTC 3 cut(s) 274, 705, 1115
PflFI GACNNNGTC 1 cut(s) 173
PfoI TCCNGGA 1 cut(s) 277
PkrI GCNGC 3 cut(s) 7, 547, 1040
PleI GAGTC 1 cut(s) 839
PpsI GAGTC 1 cut(s) 839
Psp124BI GAGCTC 1 cut(s) 609
Psp1406I AACGTT 1 cut(s) 59
Psp6I CCWGG 4 cut(s) 277, 730, 947, 1016
PspEI GGTNACC 1 cut(s) 95
PspGI CCWGG 4 cut(s) 277, 730, 947, 1016
PspN4I GGNNCC 3 cut(s) 852, 946, 1105
PspPI GGNCC 2 cut(s) 135, 968
PsuI RGATCY 3 cut(s) 80, 658, 850
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 1 cut(s) 651
RsaNI GTAC 1 cut(s) 650
RseI CAYNNNNRTG 1 cut(s) 1069
SacI GAGCTC 1 cut(s) 609
SapI GCTCTTC 1 cut(s) 597
SaqAI TTAA 4 cut(s) 146, 264, 408, 524
SatI GCNGC 3 cut(s) 6, 546, 1039
Sau3AI GATC 4 cut(s) 80, 244, 658, 850
Sau96I GGNCC 2 cut(s) 135, 968
SchI GAGTC 1 cut(s) 839
ScrFI CCNGG 5 cut(s) 181, 279, 732, 949, 1018
SduI GDGCHC 3 cut(s) 374, 609, 798
SexAI ACCWGGT 1 cut(s) 947
SfaNI GCATC 3 cut(s) 310, 338, 340
SfuI TTCGAA 1 cut(s) 830
SinI GGWCC 1 cut(s) 135
SmiMI CAYNNNNRTG 1 cut(s) 1069
SmlI CTYRAG 1 cut(s) 1000
SmoI CTYRAG 1 cut(s) 1000
Sse9I AATT 7 cut(s) 151, 228, 464, 698, 872, 911, 938
SsiI CCGC 3 cut(s) 47, 1038, 1166
SspMI CTAG 2 cut(s) 599, 770
SstI GAGCTC 1 cut(s) 609
StyD4I CCNGG 5 cut(s) 179, 277, 730, 947, 1016
StyI CCWWGG 1 cut(s) 640
TaaI ACNGT 3 cut(s) 101, 219, 394
TaiI ACGT 1 cut(s) 62
TaqI TCGA 4 cut(s) 243, 654, 746, 830
TasI AATT 7 cut(s) 151, 228, 464, 698, 872, 911, 938
TauI GCSGC 1 cut(s) 1041
TfiI GAWTC 3 cut(s) 274, 705, 1115
Tru1I TTAA 4 cut(s) 146, 264, 408, 524
Tru9I TTAA 4 cut(s) 146, 264, 408, 524
TscAI CASTG 1 cut(s) 457
TseI GCWGC 2 cut(s) 5, 545
TspDTI ATGAA 4 cut(s) 394, 884, 924, 1043
TspGWI ACGGA 1 cut(s) 551
TspRI CASTG 1 cut(s) 457
Tth111I GACNNNGTC 1 cut(s) 173
VpaK11BI GGWCC 1 cut(s) 135
XapI RAATTY 3 cut(s) 151, 228, 911
XceI RCATGY 1 cut(s) 574
XcmI CCANNNNNNNNNTGG 1 cut(s) 738
XmnI GAANNNNTTC 1 cut(s) 875
XspI CTAG 2 cut(s) 599, 770
Zsp2I ATGCAT 1 cut(s) 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.