Prupe.5G180900_v2.0.a1

Lipase (class 3)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15155820 .. 15158668
2849 bp
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UTR
Exon/CDS
Intron
Prupe.5G180900.1

Sequence Viewer

Length: 1641 bp
ATGTATGTTCAAAGGCTTGGAGAGATGTTGAAGATTAGTGAGGAGAATTTGAAGACAAGTTGCTCTCTGTCCTTGAAGGCTCAGAACTTCCCAGATGAGCAGTTTCTTGTTGAGAAATCCCCTGCCTCATCACATGCTTTTTTCAGCTTTCCAGGATCTTGGTCTGTGGATGGTTGGTATTCTGGAGATAAAGCTTTTGGTGAAAAAGTGATCAATCTCGAACTCTTTCCTTCTATGAGAAGTATAGGCAATTATGATAAAGATGACAAACCTGAAGACCAAGAATTTGCAACTGGATTTGTAAACCAAGCCTTTCTGCACAGACTTGAACATGTATTGAAGACTTCCCAGCTTGTAAATCAGGTGGAAGCGGCTCTGAATGAACAGAAGAGTATAATATTTACAGGACACTCTACAGGTGGAGCAATTGCTGCGCTTGCCACAATCTGGTTCTTGCAAAACTACCCGAATGCGAATAATGGAGCATTCTGTGTGACTTTCGGATCTCCCCTTGTTGGTAATCATATTATTTCTCATGCTCTTAGGAGAGAGAAGTGGTCTCAATGCTTCATACATTTTGTCATGAGATATGACATTGTCCCTCGGATTTTGCTTGCTCCTCTCACCCCCATTCAACAACAGTTTGAGAAAGTTCTCCCCTTCTTCAATCCAACATCCCCCAACTTTAAAAGTGAGGTTCTTGGAGCATCGCCGGAGGCCTTGCATTTCTATGCAAATGTGATCAGGAATGCATCATCTCTTACAAGCCATGTTGCTTTTCAACTAATGGGGAACACAAATCTTTTATTGGACACTGTAAGACACTTCACTAAACTAAGCCCTTACAAGCCTTTTGGGACTTACGTTTTTTGCACTGGGAATGGGAAATTGGTTGTCTTGAAAAACCCTGAAGCAGTCTTGCAAACCTTGTCCTACTCTTGTCTGTTAAGCAGCGAAACTGAACATGCAGCAGCGATTGCCCACAAATGCTTGAACGAGCATTTTGGCTATGAGAAGGAATTTCTAGGTGATGAATCCAGCTTAGACATGCAAAATGTGGTTGATTTTGATAAACTAGAACTTCTCTTAGGCTCAGATGGTTACTTGGATGACCTTGGCTTGGGTGTAAGAGCTAGATTGTCTCTTTGCGCTGCGAAAAAATTCGAAGAGAAAAAACAAGAAAACGAGAAAAGCGTAGCTTCAAAAGTGGAAGCATTTAAAGATGTGATGAAGAAACTAGAAGACTACCGAGACTTTTGTAAGGAGAATGGGGGATATTACCAGGCCTTCAAGATACAGGGTGAGAAGAAAGACTTTGATGCTAATGTGAACAGGCTTGTGCTAGCAGGTATATGGGATGAGATTATTGAAATGCTGAAAAGATATGCGCTTCCTGATGAATTTGAGGGTACATATAAGTGGATAGAACTAGGAACCAAGTTCCGCGACCTTGTTGAGCCTCTTGACATTGCTAACTACTATCGGCATGCAAAGGGCAGGCGTTACATGGACAAAGGCGGCAGGCCAAAGCGTTACAAATACACACAAAGATGGCTGGAGCATCACCTAAAATTGCAGCCAGGAGCCTGTGGAAAATCCTCCTGCTTTTGGGCAGAGGAGGAGGAGTCACTAAAGCAATAG

Protein Analysis

547

Amino Acids

62.13

Weight (kDa)

6.37

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1337
AccB7I CCANNNNNTGG 1 cut(s) 447
AccII CGCG 1 cut(s) 1446
AciI CCGC 3 cut(s) 371, 1444, 1518
AclWI GGATC 2 cut(s) 163, 511
AcsI RAATTY 5 cut(s) 46, 284, 1019, 1160, 1400
AcuI CTGAAG 2 cut(s) 294, 930
AfaI GTAC 1 cut(s) 1411
AfiI CCNNNNNNNGG 4 cut(s) 447, 515, 1120, 1608
AflIII ACRYGT 1 cut(s) 331
AjnI CCWGG 3 cut(s) 151, 1281, 1579
AjuI GAANNNNNNNTTGG 2 cut(s) 872, 904
AluBI AGCT 6 cut(s) 147, 194, 352, 1041, 1133, 1199
AluI AGCT 6 cut(s) 147, 194, 352, 1041, 1133, 1199
Alw26I GTCTC 3 cut(s) 564, 1146, 1245
AlwI GGATC 2 cut(s) 163, 511
AoxI GGCC 3 cut(s) 717, 1284, 1523
ApeKI GCWGC 6 cut(s) 431, 951, 968, 971, 1151, 1576
ApoI RAATTY 5 cut(s) 46, 284, 1019, 1160, 1400
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
Asp700I GAANNNNTTC 2 cut(s) 225, 1160
AspLEI GCGC 3 cut(s) 436, 1151, 1390
AsuHPI GGTGA 5 cut(s) 212, 616, 1040, 1313, 1556
AsuII TTCGAA 1 cut(s) 1164
AsuNHI GCTAGC 1 cut(s) 1342
BbsI GAAGAC 4 cut(s) 59, 282, 347, 1248
BbvI GCAGC 6 cut(s) 418, 963, 980, 983, 1138, 1588
BccI CCATC 3 cut(s) 164, 1091, 1545
BciT130I CCWGG 3 cut(s) 153, 1283, 1581
BclI TGATCA 2 cut(s) 210, 741
BcoDI GTCTC 3 cut(s) 564, 1146, 1245
BfaI CTAG 6 cut(s) 1025, 1076, 1134, 1238, 1343, 1430
BfmI CTRYAG 1 cut(s) 414
BfuAI ACCTGC 1 cut(s) 1337
BisI GCNGC 8 cut(s) 372, 432, 952, 969, 972, 1152, 1519, 1577
BlsI GCNGC 8 cut(s) 373, 433, 953, 970, 973, 1153, 1520, 1578
Bme1390I CCNGG 3 cut(s) 153, 1283, 1581
BmiI GGNNCC 2 cut(s) 1435, 1585
BmrFI CCNGG 3 cut(s) 153, 1283, 1581
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 4 cut(s) 716, 761, 1309, 1570
BmtI GCTAGC 1 cut(s) 1346
BmuI ACTGGG 1 cut(s) 885
BpiI GAAGAC 4 cut(s) 59, 282, 347, 1248
BpmI CTGGAG 2 cut(s) 204, 1577
Bpu14I TTCGAA 1 cut(s) 1164
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 2 cut(s) 602, 1114
BsaXI ACNNNNNCTCC 2 cut(s) 1610, 1640
Bsc4I CCNNNNNNNGG 4 cut(s) 447, 515, 1120, 1608
Bse1I ACTGG 2 cut(s) 298, 880
Bse3DI GCAATG 1 cut(s) 1467
BseBI CCWGG 3 cut(s) 153, 1283, 1581
BseDI CCNNGG 2 cut(s) 602, 1114
BseGI GGATG 4 cut(s) 175, 674, 1114, 1363
BseLI CCNNNNNNNGG 4 cut(s) 447, 515, 1120, 1608
BseMI GCAATG 1 cut(s) 1467
BseMII CTCAG 2 cut(s) 95, 1107
BseNI ACTGG 2 cut(s) 298, 880
BseRI GAGGAG 5 cut(s) 56, 609, 1631, 1634, 1637
BseXI GCAGC 6 cut(s) 418, 963, 980, 983, 1138, 1588
BseYI CCCAGC 1 cut(s) 348
BsgI GTGCAG 1 cut(s) 302
Bsh1236I CGCG 1 cut(s) 1446
BshFI GGCC 3 cut(s) 719, 1286, 1525
BsiSI CCGG 1 cut(s) 713
BslFI GGGAC 2 cut(s) 584, 871
BslI CCNNNNNNNGG 4 cut(s) 447, 515, 1120, 1608
BsmAI GTCTC 3 cut(s) 564, 1146, 1245
BsmFI GGGAC 2 cut(s) 584, 871
BsmI GAATGC 3 cut(s) 475, 485, 754
BsnI GGCC 3 cut(s) 719, 1286, 1525
Bso31I GGTCTC 1 cut(s) 564
Bsp119I TTCGAA 1 cut(s) 1164
Bsp143I GATC 4 cut(s) 155, 210, 503, 741
BspACI CCGC 3 cut(s) 371, 1444, 1518
BspANI GGCC 3 cut(s) 719, 1286, 1525
BspCNI CTCAG 2 cut(s) 94, 1106
BspFNI CGCG 1 cut(s) 1446
BspHI TCATGA 1 cut(s) 582
BspLI GGNNCC 2 cut(s) 1435, 1585
BspMI ACCTGC 1 cut(s) 1337
BspOI GCTAGC 1 cut(s) 1346
BspPI GGATC 2 cut(s) 163, 511
BspT104I TTCGAA 1 cut(s) 1164
BspTNI GGTCTC 1 cut(s) 564
BsrDI GCAATG 1 cut(s) 1467
BsrI ACTGG 2 cut(s) 298, 880
BssECI CCNNGG 2 cut(s) 602, 1114
BssMI GATC 4 cut(s) 155, 210, 503, 741
BssT1I CCWWGG 1 cut(s) 1114
Bst2UI CCWGG 3 cut(s) 153, 1283, 1581
Bst4CI ACNGT 2 cut(s) 642, 817
Bst6I CTCTTC 2 cut(s) 383, 1161
BstAPI GCANNNNNTGC 2 cut(s) 431, 977
BstBI TTCGAA 1 cut(s) 1164
BstC8I GCNNGC 6 cut(s) 438, 615, 1344, 1488, 1499, 1523
BstDEI CTNAG 6 cut(s) 81, 542, 836, 1042, 1087, 1093
BstF5I GGATG 4 cut(s) 175, 674, 1114, 1363
BstFNI CGCG 1 cut(s) 1446
BstHHI GCGC 3 cut(s) 436, 1151, 1390
BstKTI GATC 4 cut(s) 158, 213, 506, 744
BstMAI GTCTC 3 cut(s) 564, 1146, 1245
BstMBI GATC 4 cut(s) 155, 210, 503, 741
BstMWI GCNNNNNNNGC 3 cut(s) 431, 437, 977
BstNI CCWGG 3 cut(s) 153, 1283, 1581
BstNSI RCATGY 5 cut(s) 137, 335, 968, 1051, 1490
BstSCI CCNGG 3 cut(s) 151, 1281, 1579
BstSFI CTRYAG 1 cut(s) 414
BstUI CGCG 1 cut(s) 1446
BstV1I GCAGC 6 cut(s) 418, 963, 980, 983, 1138, 1588
BstV2I GAAGAC 4 cut(s) 59, 282, 347, 1248
BstX2I RGATCY 2 cut(s) 155, 503
BstXI CCANNNNNNTGG 1 cut(s) 159
BstYI RGATCY 2 cut(s) 155, 503
BsuRI GGCC 3 cut(s) 719, 1286, 1525
BtgZI GCGATG 1 cut(s) 693
BtsCI GGATG 4 cut(s) 175, 674, 1114, 1363
BtsIMutI CAGTG 2 cut(s) 813, 873
BveI ACCTGC 1 cut(s) 1337
Cac8I GCNNGC 6 cut(s) 438, 615, 1344, 1488, 1499, 1523
CciI TCATGA 1 cut(s) 582
CfoI GCGC 3 cut(s) 436, 1151, 1390
Csp6I GTAC 1 cut(s) 1410
CviAII CATG 9 cut(s) 134, 332, 536, 583, 770, 965, 1048, 1487, 1507
CviQI GTAC 1 cut(s) 1410
DdeI CTNAG 6 cut(s) 81, 542, 836, 1042, 1087, 1093
DpnI GATC 4 cut(s) 157, 212, 505, 743
DpnII GATC 4 cut(s) 155, 210, 503, 741
DraI TTTAAA 2 cut(s) 688, 1219
Eam1104I CTCTTC 2 cut(s) 383, 1161
EarI CTCTTC 2 cut(s) 383, 1161
Eco130I CCWWGG 1 cut(s) 1114
Eco147I AGGCCT 2 cut(s) 719, 1286
Eco31I GGTCTC 1 cut(s) 564
Eco57I CTGAAG 2 cut(s) 294, 930
EcoRII CCWGG 3 cut(s) 151, 1281, 1579
EcoT14I CCWWGG 1 cut(s) 1114
EcoT22I ATGCAT 1 cut(s) 754
ErhI CCWWGG 1 cut(s) 1114
FaeI CATG 9 cut(s) 137, 335, 539, 586, 773, 968, 1051, 1490, 1510
FalI AAGNNNNNCTT 4 cut(s) 1183, 1215, 1298, 1330
FaqI GGGAC 2 cut(s) 584, 871
FatI CATG 9 cut(s) 133, 331, 535, 582, 769, 964, 1047, 1486, 1506
FbaI TGATCA 2 cut(s) 210, 741
Fnu4HI GCNGC 8 cut(s) 372, 432, 952, 969, 972, 1152, 1519, 1577
FokI GGATG 4 cut(s) 182, 661, 1121, 1370
Fsp4HI GCNGC 8 cut(s) 372, 432, 952, 969, 972, 1152, 1519, 1577
FspBI CTAG 6 cut(s) 1025, 1076, 1134, 1238, 1343, 1430
GlaI GCGC 3 cut(s) 435, 1150, 1389
GluI GCNGC 8 cut(s) 372, 432, 952, 969, 972, 1152, 1519, 1577
GsaI CCCAGC 1 cut(s) 352
GsuI CTGGAG 2 cut(s) 204, 1577
HaeIII GGCC 3 cut(s) 719, 1286, 1525
HapII CCGG 1 cut(s) 713
HhaI GCGC 3 cut(s) 436, 1151, 1390
Hin1II CATG 9 cut(s) 137, 335, 539, 586, 773, 968, 1051, 1490, 1510
Hin6I GCGC 3 cut(s) 434, 1149, 1388
HinP1I GCGC 3 cut(s) 434, 1149, 1388
HindIII AAGCTT 1 cut(s) 192
HinfI GANTC 2 cut(s) 1034, 1625
HpaII CCGG 1 cut(s) 713
HphI GGTGA 5 cut(s) 212, 616, 1040, 1313, 1556
Hpy166II GTNNAC 2 cut(s) 304, 1330
Hpy188I TCNGA 5 cut(s) 84, 378, 503, 606, 1096
Hpy188III TCNNGA 8 cut(s) 183, 218, 583, 745, 898, 1291, 1394, 1463
Hpy8I GTNNAC 2 cut(s) 304, 1330
HpyAV CCTTC 5 cut(s) 70, 240, 670, 1009, 1297
HpyCH4III ACNGT 2 cut(s) 642, 817
HpyCH4IV ACGT 1 cut(s) 864
HpyF10VI GCNNNNNNNGC 3 cut(s) 431, 437, 977
HpyF3I CTNAG 6 cut(s) 81, 542, 836, 1042, 1087, 1093
HpySE526I ACGT 1 cut(s) 864
Hsp92II CATG 9 cut(s) 137, 335, 539, 586, 773, 968, 1051, 1490, 1510
HspAI GCGC 3 cut(s) 434, 1149, 1388
Ksp22I TGATCA 2 cut(s) 210, 741
Kzo9I GATC 4 cut(s) 155, 210, 503, 741
LmnI GCTCC 6 cut(s) 422, 482, 622, 704, 1558, 1583
Lsp1109I GCAGC 6 cut(s) 418, 963, 980, 983, 1138, 1588
LweI GCATC 4 cut(s) 716, 761, 1309, 1570
MaeI CTAG 6 cut(s) 1025, 1076, 1134, 1238, 1343, 1430
MaeII ACGT 1 cut(s) 864
MaeIII GTNAC 5 cut(s) 493, 1100, 1502, 1532, 1626
MalI GATC 4 cut(s) 157, 212, 505, 743
MboI GATC 4 cut(s) 155, 210, 503, 741
MfeI CAATTG 1 cut(s) 426
MflI RGATCY 2 cut(s) 155, 503
MluCI AATT 9 cut(s) 46, 250, 284, 426, 887, 1019, 1160, 1400, 1571
MlyI GAGTC 1 cut(s) 1634
MmeI TCCRAC 1 cut(s) 695
Mph1103I ATGCAT 1 cut(s) 754
MroXI GAANNNNTTC 2 cut(s) 225, 1160
MseI TTAA 3 cut(s) 687, 947, 1218
MslI CAYNNNNRTG 3 cut(s) 729, 1417, 1549
MspI CCGG 1 cut(s) 713
MspR9I CCNGG 3 cut(s) 153, 1283, 1581
MunI CAATTG 1 cut(s) 426
Mva1269I GAATGC 3 cut(s) 475, 485, 754
MvaI CCWGG 3 cut(s) 153, 1283, 1581
MvnI CGCG 1 cut(s) 1446
MwoI GCNNNNNNNGC 3 cut(s) 431, 437, 977
NdeII GATC 4 cut(s) 155, 210, 503, 741
NheI GCTAGC 1 cut(s) 1342
NlaIII CATG 9 cut(s) 137, 335, 539, 586, 773, 968, 1051, 1490, 1510
NlaIV GGNNCC 2 cut(s) 1435, 1585
NmuCI GTSAC 2 cut(s) 493, 1626
NsiI ATGCAT 1 cut(s) 754
NspI RCATGY 5 cut(s) 137, 335, 968, 1051, 1490
NspV TTCGAA 1 cut(s) 1164
PaeI GCATGC 1 cut(s) 1490
PagI TCATGA 1 cut(s) 582
PceI AGGCCT 2 cut(s) 719, 1286
PciI ACATGT 1 cut(s) 331
PcsI WCGNNNNNNNCGW 1 cut(s) 1191
PctI GAATGC 3 cut(s) 475, 485, 754
PdmI GAANNNNTTC 2 cut(s) 225, 1160
PfeI GAWTC 1 cut(s) 1034
PflFI GACNNNGTC 1 cut(s) 596
PflMI CCANNNNNTGG 1 cut(s) 447
PfoI TCCNGGA 1 cut(s) 151
PkrI GCNGC 8 cut(s) 373, 433, 953, 970, 973, 1153, 1520, 1578
PleI GAGTC 1 cut(s) 1633
PpsI GAGTC 1 cut(s) 1633
PscI ACATGT 1 cut(s) 331
Psp6I CCWGG 3 cut(s) 151, 1281, 1579
PspFI CCCAGC 1 cut(s) 348
PspGI CCWGG 3 cut(s) 151, 1281, 1579
PspN4I GGNNCC 2 cut(s) 1435, 1585
PsuI RGATCY 2 cut(s) 155, 503
PsyI GACNNNGTC 1 cut(s) 596
RsaI GTAC 1 cut(s) 1411
RsaNI GTAC 1 cut(s) 1410
RseI CAYNNNNRTG 3 cut(s) 729, 1417, 1549
SaqAI TTAA 3 cut(s) 687, 947, 1218
SatI GCNGC 8 cut(s) 372, 432, 952, 969, 972, 1152, 1519, 1577
Sau3AI GATC 4 cut(s) 155, 210, 503, 741
SchI GAGTC 1 cut(s) 1634
ScrFI CCNGG 3 cut(s) 153, 1283, 1581
SfaNI GCATC 4 cut(s) 716, 761, 1309, 1570
SfcI CTRYAG 1 cut(s) 414
SfuI TTCGAA 1 cut(s) 1164
SmiMI CAYNNNNRTG 3 cut(s) 729, 1417, 1549
SphI GCATGC 1 cut(s) 1490
Sse9I AATT 9 cut(s) 46, 250, 284, 426, 887, 1019, 1160, 1400, 1571
SseBI AGGCCT 2 cut(s) 719, 1286
SsiI CCGC 3 cut(s) 371, 1444, 1518
SspI AATATT 1 cut(s) 399
SspMI CTAG 6 cut(s) 1025, 1076, 1134, 1238, 1343, 1430
StuI AGGCCT 2 cut(s) 719, 1286
StyD4I CCNGG 3 cut(s) 151, 1281, 1579
StyI CCWWGG 1 cut(s) 1114
TaaI ACNGT 2 cut(s) 642, 817
TaiI ACGT 1 cut(s) 867
TaqI TCGA 2 cut(s) 219, 1164
TasI AATT 9 cut(s) 46, 250, 284, 426, 887, 1019, 1160, 1400, 1571
TauI GCSGC 2 cut(s) 374, 1521
TfiI GAWTC 1 cut(s) 1034
Tru1I TTAA 3 cut(s) 687, 947, 1218
Tru9I TTAA 3 cut(s) 687, 947, 1218
TscAI CASTG 2 cut(s) 820, 880
TseFI GTSAC 2 cut(s) 493, 1626
TseI GCWGC 6 cut(s) 431, 951, 968, 971, 1151, 1576
Tsp45I GTSAC 2 cut(s) 493, 1626
TspDTI ATGAA 5 cut(s) 396, 559, 1047, 1244, 1413
TspRI CASTG 2 cut(s) 820, 880
Tth111I GACNNNGTC 1 cut(s) 596
Van91I CCANNNNNTGG 1 cut(s) 447
XapI RAATTY 5 cut(s) 46, 284, 1019, 1160, 1400
XceI RCATGY 5 cut(s) 137, 335, 968, 1051, 1490
XmnI GAANNNNTTC 2 cut(s) 225, 1160
XspI CTAG 6 cut(s) 1025, 1076, 1134, 1238, 1343, 1430
Zsp2I ATGCAT 1 cut(s) 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.