Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005764

Physical Location & Seq

Genomic Coordinates Reverse (-)

65157677 .. 65167740

Gene Structure 10064 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00273380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGACACAGAGAATAGAGAGTGTGAAGAATGAAGTTTATATAGACCTCAGTTTACAAAAGGCTTATCGTTCATACGCTCATACACCCAAATCCAATCAAAAGTCTAGGGGTATCCTCAGAATTTCTCATCCCAGCAACCATTCTCAAGGTTCCTATAAATTAGCTGGGAGTCTTCGACCAAAGCAGAGCATCCAAACCAAGCACAAGATTACCAATTATTACAAAGAATTCAGCGAAATGGATAGTGAAACACTTGTTAGGAAAATAGGAATCAGTGAGCAGCTCATCAAGAAAAGTTGCAGCCTTTCATGGAAGGATCAGTTCAGTAAGGAGCTGTTTCATGTTGACAAGAGCTCATCGGATGCGGTGTTCATCGTCTTCCCCGGATCATGGACGGTCAAAGAGTGGTTTTCCGGCGACCAAGCTTTTGGAGAAACAAAGATCAATAGTAAAGATTGGTCCAAAAAAGCCTTTCCTTCTATGAGAAGTATTGGAAATGATGATGTTGCAATTGTCAACCAAGCTTTTCTGGAAAGGTTTGAACTTGTATTGAAGGATTACGAGTTTCTACAAGAGGTGACATCGGCCTGGAACGGGAATAAGCCAATAATATTTACAGGGCATTCTTCTGGTGGCGCAGTTGCTGTGCTTGCTACAATCTGGTTCTTAGAACGGAGTCCGAAAGAAAACACTGGAACAGCCAAATGTGTGACTTTTGGATCTCCGCTTGTCGGTGACTACATTATTTCTCATGCTCTTAAGAGAGAGAAATGGTCTAAACACTTTATACATTTTGTCATGAGATATGACATTGTTCCTCGGATTTTGCTTGCTCCTCTCTCATCCATTCAGCAAGCATTGGAGCATGTCCTCCAATACTTCACTGCAAATGGTCACCATTATCCATGTGAATCAATTGCCCCGGACTTTTATACAAATGTAATGAGGAATACCTCTGCTCTCGCAAGCTATGCTGCCTGCAAACTGATGGGGAATACTAATTTGCTGCTCGAGACCCTAACAAACTTCACCAAACTAAGCCCTTATAGACCTTTTGGGACTTACATTTTCTGCACTGGGAATGGGAAGCTGGTTCACTTGGACAACCCTGAAGCTGTGCTGCAACTCCTTTTCTTCTCTTGTCAGTTAAGCCATGAAAACGAAATGGAGGCAACAGCTAGGGGCTGCATAAAGGCACACTTGGACTATGCAAATGAATTAGGAAGGAGCTTGGAAGAGAATGTGGTTTGTGTTGATCGATTGGAAGAGCTCCCCCTAGCCTCAGATGGTAGTGCCTTGGATGACCTTGGCCTGATTGAAGGAAAGAAGGCAGAAATGGAAGAGGGAATGAAAGGACTAGAAGAGTACAGAACCTTCAATGCGCAGAAAGTGGGATATTACGACGCCTTCAAGAAACAGAACGAAAAGAGAGACTTTGATGCGAATGTGAGGAGGCTGGTGCTGGCAGGTATATGGGATGAGATCATCGAAATGTTGAAGAGGTACGATCTTCCCGACGAGTTTGAAGGTGAAGATTGGTGGATAGACCTAGGAACCAAGTTCCGGCGCCTTGTTGAGCCTCTTGATATTGCCAACTACTACAGACACGCAAAGAACGAAGACACTGGAGCCTATATGATCAAGGGAAGGCCAAGGCGCTACAGATACCCACAGAGATGGCTTGAAAAGAAGAATGGTTGGGAGAGTGGTACCTGTGGTGAATCTTGCTTTTGGGCAGAGGTGGAGGAGTTGCTCAAACTAGCTAGTAATGGTGGTAAAGTAGATGAGACAAGGGCTAAAGAACTACAGGAAGGACTAGCTCGATGGATTGAGCAGGGTGTGGCAGGTGAGGAGGTGTTCTTGGGAGACTCTACGTTTCTCAAATTGTGGGACGAACTCGGCCGTCTCAAACTCCAACAGGAATCCATTCGCACATTGATAGACAAGTTTGCCAACTTATCAGTTTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001666 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007584 GO:0008150 GO:0008219 GO:0009605 GO:0009607 GO:0009626 GO:0009627 GO:0009628 GO:0009653 GO:0009814 GO:0009987 GO:0009991 GO:0010035 GO:0010310 GO:0010618 GO:0010941 GO:0010942 GO:0012501 GO:0016298 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031667 GO:0032502 GO:0033554 GO:0034050 GO:0036293 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045087 GO:0046983 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070482 GO:0098542 GO:1901700 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

656

Amino Acids

74.99

Weight (kDa)

6.39

Isoelectric Point (pI)

37.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase_3	PF01764	149 - 276	8.5e-21	Lipase (class 3)
EDS1_EP	PF18117	453 - 637	6.5e-49	Enhanced disease susceptibility 1 protein EP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48080 AT3G48090 AT3G48090
fragaria_vesca	FvH4_5g16230 FvH4_5g16230
malus_domestica	MD06G1182600.v1.1 MD06G1182800.v1.1 MD14G1188600.v1.1 MD14G1188700.v1.1
prunus_persica	Prupe.5G180700_v2.0.a1 Prupe.5G180900_v2.0.a1 Prupe.5G181000_v2.0.a1
pyrus_communis	pycom06g16150 pycom06g16180 pycom14g15630 pycom14g15640
rosa_chinensis	RchiOBHm_Chr2g0170571 RchiOBHm_Chr7g0179871
rosa_laevigata	RLG00000005316
rosa_multiflora	Rmu_sc0012773.1_g000001 Rmu_sc0016092.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273380
rosa_rugosa	Rorug06G0428800
rosa_samantha	Rh7AG028900 Rh7BG028000 Rh7CG029800 Rh7DG029200
rosa_wichuraiana	Rw7G002310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1835
Acc16I	TGCGCA	1 cut(s)	1383
Acc36I	ACCTGC	2 cut(s)	1457, 1835
Acc65I	GGTACC	1 cut(s)	1709
AccB1I	GGYRCC	2 cut(s)	1566, 1709
AciI	CCGC	2 cut(s)	365, 725
AclWI	GGATC	3 cut(s)	324, 394, 727
AcoI	YGGCCR	1 cut(s)	1900
AcsI	RAATTY	2 cut(s)	120, 227
AcuI	CTGAAG	1 cut(s)	1131
AcyI	GRCGYC	2 cut(s)	1404, 1567
AfaI	GTAC	3 cut(s)	1367, 1505, 1711
AfiI	CCNNNNNNNGG	4 cut(s)	390, 594, 731, 1563
AflII	CTTAAG	1 cut(s)	758
AgsI	TTSAA	8 cut(s)	542, 553, 1319, 1378, 1411, 1498, 1526, 1685
AjnI	CCWGG	1 cut(s)	587
AloI	GAACNNNNNNTCC	2 cut(s)	353, 385
Alw21I	GWGCWC	2 cut(s)	356, 1272
Alw26I	GTCTC	5 cut(s)	1007, 1425, 1781, 1860, 1910
AlwI	GGATC	3 cut(s)	324, 394, 727
AlwNI	CAGNNNCTG	1 cut(s)	644
Ama87I	CYCGRG	1 cut(s)	1010
AoxI	GGCC	4 cut(s)	585, 1309, 1649, 1900
ApeKI	GCWGC	6 cut(s)	280, 300, 974, 1006, 1120, 1185
ApoI	RAATTY	2 cut(s)	120, 227
ArsI	GACNNNNNNTTYG	2 cut(s)	410, 442
Asp700I	GAANNNNTTC	1 cut(s)	1926
Asp718I	GGTACC	1 cut(s)	1709
AspA2I	CCTAGG	1 cut(s)	1549
AspLEI	GCGC	4 cut(s)	638, 1384, 1569, 1659
AspS9I	GGNCC	1 cut(s)	459
AsuC2I	CCSGG	2 cut(s)	384, 923
AsuHPI	GGTGA	7 cut(s)	589, 746, 887, 1021, 1541, 1730, 1859
AvaI	CYCGRG	1 cut(s)	1010
AvaII	GGWCC	1 cut(s)	459
AvrII	CCTAGG	1 cut(s)	1549
BanI	GGYRCC	2 cut(s)	1566, 1709
BanII	GRGCYC	2 cut(s)	356, 1272
BarI	GAAGNNNNNNTAC	2 cut(s)	1358, 1390
BbsI	GAAGAC	3 cut(s)	164, 370, 1626
Bbv12I	GWGCWC	2 cut(s)	356, 1272
BbvI	GCAGC	6 cut(s)	292, 312, 961, 993, 1107, 1172
BccI	CCATC	4 cut(s)	982, 1280, 1671, 1818
BceAI	ACGGC	1 cut(s)	1887
BciT130I	CCWGG	1 cut(s)	589
BciVI	GTATCC	1 cut(s)	122
BclI	TGATCA	1 cut(s)	1638
BcnI	CCSGG	2 cut(s)	384, 923
BcoDI	GTCTC	5 cut(s)	1007, 1425, 1781, 1860, 1910
BfaI	CTAG	8 cut(s)	105, 1179, 1277, 1358, 1550, 1760, 1764, 1817
BfmI	CTRYAG	3 cut(s)	1600, 1660, 1805
BfoI	RGCGCY	2 cut(s)	1570, 1660
BfrI	CTTAAG	1 cut(s)	758
BfuAI	ACCTGC	2 cut(s)	1457, 1835
BfuI	GTATCC	1 cut(s)	122
BisI	GCNGC	6 cut(s)	281, 301, 975, 1007, 1121, 1186
BlnI	CCTAGG	1 cut(s)	1549
BlsI	GCNGC	6 cut(s)	282, 302, 976, 1008, 1122, 1187
Bme1390I	CCNGG	3 cut(s)	384, 589, 923
Bme18I	GGWCC	1 cut(s)	459
BmeT110I	CYCGRG	1 cut(s)	1010
BmgT120I	GGNCC	1 cut(s)	459
BmiI	GGNNCC	5 cut(s)	151, 1555, 1568, 1630, 1711
BmrFI	CCNGG	3 cut(s)	384, 589, 923
BmrI	ACTGGG	1 cut(s)	1086
BmsI	GCATC	3 cut(s)	198, 352, 1429
BmuI	ACTGGG	1 cut(s)	1086
BpiI	GAAGAC	3 cut(s)	164, 370, 1626
BpmI	CTGGAG	1 cut(s)	1647
BpuEI	CTTGAG	1 cut(s)	129
BpuMI	CCSGG	2 cut(s)	384, 923
Bsa29I	ATCGAT	1 cut(s)	1258
BsaHI	GRCGYC	2 cut(s)	1404, 1567
BsaI	GGTCTC	1 cut(s)	1007
BsaJI	CCNNGG	7 cut(s)	382, 818, 921, 1296, 1306, 1549, 1652
Bsc4I	CCNNNNNNNGG	4 cut(s)	390, 594, 731, 1563
Bse1I	ACTGG	3 cut(s)	697, 1081, 1630
BseBI	CCWGG	1 cut(s)	589
BseCI	ATCGAT	1 cut(s)	1258
BseDI	CCNNGG	7 cut(s)	382, 818, 921, 1296, 1306, 1549, 1652
BseGI	GGATG	6 cut(s)	127, 189, 367, 842, 1306, 1483
BseLI	CCNNNNNNNGG	4 cut(s)	390, 594, 731, 1563
BseMII	CTCAG	3 cut(s)	61, 130, 1296
BseNI	ACTGG	3 cut(s)	697, 1081, 1630
BseRI	GAGGAG	4 cut(s)	825, 1465, 1760, 1865
BseX3I	CGGCCG	1 cut(s)	1900
BseXI	GCAGC	6 cut(s)	292, 312, 961, 993, 1107, 1172
BseYI	CCCAGC	2 cut(s)	131, 164
BsgI	GTGCAG	1 cut(s)	1057
Bsh1285I	CGRYCG	1 cut(s)	1903
BshFI	GGCC	4 cut(s)	587, 1311, 1651, 1902
BshNI	GGYRCC	2 cut(s)	1566, 1709
BshVI	ATCGAT	1 cut(s)	1258
BsiEI	CGRYCG	1 cut(s)	1903
BsiHKAI	GWGCWC	2 cut(s)	356, 1272
BsiHKCI	CYCGRG	1 cut(s)	1010
BsiSI	CCGG	4 cut(s)	384, 414, 923, 1564
BslFI	GGGAC	2 cut(s)	1072, 1904
BslI	CCNNNNNNNGG	4 cut(s)	390, 594, 731, 1563
BsmAI	GTCTC	5 cut(s)	1007, 1425, 1781, 1860, 1910
BsmBI	CGTCTC	1 cut(s)	1910
BsmFI	GGGAC	2 cut(s)	1072, 1904
BsmI	GAATGC	1 cut(s)	622
BsnI	GGCC	4 cut(s)	587, 1311, 1651, 1902
Bso31I	GGTCTC	1 cut(s)	1007
BsoBI	CYCGRG	1 cut(s)	1010
Bsp1286I	GDGCHC	2 cut(s)	356, 1272
Bsp143I	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
BspACI	CCGC	2 cut(s)	365, 725
BspANI	GGCC	4 cut(s)	587, 1311, 1651, 1902
BspCNI	CTCAG	3 cut(s)	60, 129, 1295
BspDI	ATCGAT	1 cut(s)	1258
BspHI	TCATGA	1 cut(s)	798
BspLI	GGNNCC	5 cut(s)	151, 1555, 1568, 1630, 1711
BspMI	ACCTGC	2 cut(s)	1457, 1835
BspPI	GGATC	3 cut(s)	324, 394, 727
BspQI	GCTCTTC	1 cut(s)	1260
BspT107I	GGYRCC	2 cut(s)	1566, 1709
BspTI	CTTAAG	1 cut(s)	758
BspTNI	GGTCTC	1 cut(s)	1007
BsrI	ACTGG	3 cut(s)	697, 1081, 1630
BssECI	CCNNGG	7 cut(s)	382, 818, 921, 1296, 1306, 1549, 1652
BssMI	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
BssNI	GRCGYC	2 cut(s)	1404, 1567
BssT1I	CCWWGG	4 cut(s)	1296, 1306, 1549, 1652
Bst2UI	CCWGG	1 cut(s)	589
Bst4CI	ACNGT	1 cut(s)	397
Bst6I	CTCTTC	5 cut(s)	1230, 1260, 1335, 1356, 1493
BstACI	GRCGYC	2 cut(s)	1404, 1567
BstAFI	CTTAAG	1 cut(s)	758
BstAPI	GCANNNNNTGC	1 cut(s)	971
BstC8I	GCNNGC	6 cut(s)	651, 831, 855, 967, 979, 1464
BstDEI	CTNAG	5 cut(s)	47, 116, 667, 1037, 1282
BstEII	GGTNACC	1 cut(s)	893
BstF5I	GGATG	6 cut(s)	127, 189, 367, 842, 1306, 1483
BstH2I	RGCGCY	2 cut(s)	1570, 1660
BstHHI	GCGC	4 cut(s)	638, 1384, 1569, 1659
BstKTI	GATC	8 cut(s)	319, 389, 444, 722, 1258, 1485, 1510, 1641
BstMAI	GTCTC	5 cut(s)	1007, 1425, 1781, 1860, 1910
BstMBI	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
BstMCI	CGRYCG	1 cut(s)	1903
BstMWI	GCNNNNNNNGC	2 cut(s)	650, 971
BstNI	CCWGG	1 cut(s)	589
BstNSI	RCATGY	1 cut(s)	869
BstPI	GGTNACC	1 cut(s)	893
BstSCI	CCNGG	3 cut(s)	382, 587, 921
BstSFI	CTRYAG	3 cut(s)	1600, 1660, 1805
BstV1I	GCAGC	6 cut(s)	292, 312, 961, 993, 1107, 1172
BstV2I	GAAGAC	3 cut(s)	164, 370, 1626
BstX2I	RGATCY	1 cut(s)	719
BstXI	CCANNNNNNTGG	2 cut(s)	428, 1677
BstYI	RGATCY	1 cut(s)	719
BstZI	CGGCCG	1 cut(s)	1900
Bsu15I	ATCGAT	1 cut(s)	1258
BsuI	GTATCC	1 cut(s)	122
BsuRI	GGCC	4 cut(s)	587, 1311, 1651, 1902
BsuTUI	ATCGAT	1 cut(s)	1258
BtsCI	GGATG	6 cut(s)	127, 189, 367, 842, 1306, 1483
BtsI	GCAGTG	1 cut(s)	882
BtsIMutI	CAGTG	5 cut(s)	280, 690, 882, 1074, 1623
BveI	ACCTGC	2 cut(s)	1457, 1835
Cac8I	GCNNGC	6 cut(s)	651, 831, 855, 967, 979, 1464
CaiI	CAGNNNCTG	1 cut(s)	644
CciI	TCATGA	1 cut(s)	798
CfoI	GCGC	4 cut(s)	638, 1384, 1569, 1659
Cfr13I	GGNCC	1 cut(s)	459
ClaI	ATCGAT	1 cut(s)	1258
CseI	GACGC	1 cut(s)	1412
Csp6I	GTAC	3 cut(s)	1366, 1504, 1710
CviAII	CATG	8 cut(s)	309, 341, 390, 752, 799, 866, 906, 1154
CviQI	GTAC	3 cut(s)	1366, 1504, 1710
DdeI	CTNAG	5 cut(s)	47, 116, 667, 1037, 1282
DinI	GGCGCC	1 cut(s)	1568
DpnI	GATC	8 cut(s)	318, 388, 443, 721, 1257, 1484, 1509, 1640
DpnII	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
EaeI	YGGCCR	1 cut(s)	1900
EagI	CGGCCG	1 cut(s)	1900
Eam1104I	CTCTTC	5 cut(s)	1230, 1260, 1335, 1356, 1493
EarI	CTCTTC	5 cut(s)	1230, 1260, 1335, 1356, 1493
Ecl136II	GAGCTC	2 cut(s)	354, 1270
EclXI	CGGCCG	1 cut(s)	1900
Eco130I	CCWWGG	4 cut(s)	1296, 1306, 1549, 1652
Eco24I	GRGCYC	2 cut(s)	356, 1272
Eco31I	GGTCTC	1 cut(s)	1007
Eco47I	GGWCC	1 cut(s)	459
Eco52I	CGGCCG	1 cut(s)	1900
Eco53kI	GAGCTC	2 cut(s)	354, 1270
Eco57I	CTGAAG	1 cut(s)	1131
Eco88I	CYCGRG	1 cut(s)	1010
Eco91I	GGTNACC	1 cut(s)	893
EcoICRI	GAGCTC	2 cut(s)	354, 1270
EcoO65I	GGTNACC	1 cut(s)	893
EcoRI	GAATTC	1 cut(s)	227
EcoRII	CCWGG	1 cut(s)	587
EcoT14I	CCWWGG	4 cut(s)	1296, 1306, 1549, 1652
EcoT38I	GRGCYC	2 cut(s)	356, 1272
EgeI	GGCGCC	1 cut(s)	1568
EheI	GGCGCC	1 cut(s)	1568
ErhI	CCWWGG	4 cut(s)	1296, 1306, 1549, 1652
Esp3I	CGTCTC	1 cut(s)	1910
FaeI	CATG	8 cut(s)	312, 344, 393, 755, 802, 869, 909, 1157
FalI	AAGNNNNNCTT	4 cut(s)	1184, 1216, 1418, 1450
FaqI	GGGAC	2 cut(s)	1072, 1904
FatI	CATG	8 cut(s)	308, 340, 389, 751, 798, 865, 905, 1153
FbaI	TGATCA	1 cut(s)	1638
Fnu4HI	GCNGC	6 cut(s)	281, 301, 975, 1007, 1121, 1186
FokI	GGATG	6 cut(s)	114, 176, 374, 829, 1313, 1490
FriOI	GRGCYC	2 cut(s)	356, 1272
Fsp4HI	GCNGC	6 cut(s)	281, 301, 975, 1007, 1121, 1186
FspBI	CTAG	8 cut(s)	105, 1179, 1277, 1358, 1550, 1760, 1764, 1817
FspI	TGCGCA	1 cut(s)	1383
GlaI	GCGC	4 cut(s)	637, 1383, 1568, 1658
GluI	GCNGC	6 cut(s)	281, 301, 975, 1007, 1121, 1186
GsaI	CCCAGC	2 cut(s)	135, 168
GsuI	CTGGAG	1 cut(s)	1647
HaeII	RGCGCY	2 cut(s)	1570, 1660
HaeIII	GGCC	4 cut(s)	587, 1311, 1651, 1902
HapII	CCGG	4 cut(s)	384, 414, 923, 1564
HgaI	GACGC	1 cut(s)	1412
HhaI	GCGC	4 cut(s)	638, 1384, 1569, 1659
Hin1I	GRCGYC	2 cut(s)	1404, 1567
Hin1II	CATG	8 cut(s)	312, 344, 393, 755, 802, 869, 909, 1157
Hin6I	GCGC	4 cut(s)	636, 1382, 1567, 1657
HinP1I	GCGC	4 cut(s)	636, 1382, 1567, 1657
HincII	GTYRAC	2 cut(s)	346, 517
HindII	GTYRAC	2 cut(s)	346, 517
HindIII	AAGCTT	2 cut(s)	423, 522
HinfI	GANTC	7 cut(s)	169, 270, 676, 911, 1721, 1868, 1922
HpaII	CCGG	4 cut(s)	384, 414, 923, 1564
HphI	GGTGA	7 cut(s)	589, 746, 887, 1021, 1541, 1730, 1859
Hpy166II	GTNNAC	4 cut(s)	53, 346, 517, 1096
Hpy188I	TCNGA	5 cut(s)	119, 361, 681, 822, 1285
Hpy188III	TCNNGA	7 cut(s)	289, 530, 799, 1012, 1411, 1514, 1583
Hpy8I	GTNNAC	4 cut(s)	53, 346, 517, 1096
Hpy99I	CGWCG	2 cut(s)	1406, 1520
HpyCH4III	ACNGT	1 cut(s)	397
HpyCH4IV	ACGT	1 cut(s)	1874
HpyCH4V	TGCA	8 cut(s)	300, 509, 887, 981, 1074, 1123, 1188, 1211
HpyF10VI	GCNNNNNNNGC	2 cut(s)	650, 971
HpyF3I	CTNAG	5 cut(s)	47, 116, 667, 1037, 1282
HpySE526I	ACGT	1 cut(s)	1874
Hsp92I	GRCGYC	2 cut(s)	1404, 1567
Hsp92II	CATG	8 cut(s)	312, 344, 393, 755, 802, 869, 909, 1157
HspAI	GCGC	4 cut(s)	636, 1382, 1567, 1657
KasI	GGCGCC	1 cut(s)	1566
KpnI	GGTACC	1 cut(s)	1713
Ksp22I	TGATCA	1 cut(s)	1638
Kzo9I	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
LguI	GCTCTTC	1 cut(s)	1260
LmnI	GCTCC	6 cut(s)	331, 838, 862, 1227, 1275, 1628
Lsp1109I	GCAGC	6 cut(s)	292, 312, 961, 993, 1107, 1172
LweI	GCATC	3 cut(s)	198, 352, 1429
MaeI	CTAG	8 cut(s)	105, 1179, 1277, 1358, 1550, 1760, 1764, 1817
MaeII	ACGT	1 cut(s)	1874
MaeIII	GTNAC	4 cut(s)	577, 709, 734, 893
MalI	GATC	8 cut(s)	318, 388, 443, 721, 1257, 1484, 1509, 1640
MboI	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
MfeI	CAATTG	2 cut(s)	510, 915
MflI	RGATCY	1 cut(s)	719
MhlI	GDGCHC	2 cut(s)	356, 1272
MluCI	AATT	9 cut(s)	120, 158, 214, 227, 510, 915, 1000, 1217, 1883
Mly113I	GGCGCC	1 cut(s)	1567
MlyI	GAGTC	3 cut(s)	178, 685, 1862
MmeI	TCCRAC	1 cut(s)	1939
MroXI	GAANNNNTTC	1 cut(s)	1926
MseI	TTAA	2 cut(s)	759, 1148
MslI	CAYNNNNRTG	2 cut(s)	1490, 1675
MspCI	CTTAAG	1 cut(s)	758
MspI	CCGG	4 cut(s)	384, 414, 923, 1564
MspR9I	CCNGG	3 cut(s)	384, 589, 923
MunI	CAATTG	2 cut(s)	510, 915
Mva1269I	GAATGC	1 cut(s)	622
MvaI	CCWGG	1 cut(s)	589
MwoI	GCNNNNNNNGC	2 cut(s)	650, 971
NarI	GGCGCC	1 cut(s)	1567
NciI	CCSGG	2 cut(s)	384, 923
NdeII	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
NlaIII	CATG	8 cut(s)	312, 344, 393, 755, 802, 869, 909, 1157
NlaIV	GGNNCC	5 cut(s)	151, 1555, 1568, 1630, 1711
NmeAIII	GCCGAG	1 cut(s)	1878
NmuCI	GTSAC	4 cut(s)	577, 709, 734, 893
NsbI	TGCGCA	1 cut(s)	1383
NspI	RCATGY	1 cut(s)	869
PaeR7I	CTCGAG	1 cut(s)	1010
PagI	TCATGA	1 cut(s)	798
PaqCI	CACCTGC	1 cut(s)	1835
PciSI	GCTCTTC	1 cut(s)	1260
PcsI	WCGNNNNNNNCGW	2 cut(s)	1512, 1614
PctI	GAATGC	1 cut(s)	622
PdmI	GAANNNNTTC	1 cut(s)	1926
PfeI	GAWTC	4 cut(s)	270, 911, 1721, 1922
PkrI	GCNGC	6 cut(s)	282, 302, 976, 1008, 1122, 1187
PleI	GAGTC	3 cut(s)	177, 684, 1862
PluTI	GGCGCC	1 cut(s)	1570
PpsI	GAGTC	3 cut(s)	177, 684, 1862
Psp124BI	GAGCTC	2 cut(s)	356, 1272
Psp6I	CCWGG	1 cut(s)	587
PspEI	GGTNACC	1 cut(s)	893
PspFI	CCCAGC	2 cut(s)	131, 164
PspGI	CCWGG	1 cut(s)	587
PspN4I	GGNNCC	5 cut(s)	151, 1555, 1568, 1630, 1711
PspPI	GGNCC	1 cut(s)	459
PstNI	CAGNNNCTG	1 cut(s)	644
PsuI	RGATCY	1 cut(s)	719
RsaI	GTAC	3 cut(s)	1367, 1505, 1711
RsaNI	GTAC	3 cut(s)	1366, 1504, 1710
RseI	CAYNNNNRTG	2 cut(s)	1490, 1675
SacI	GAGCTC	2 cut(s)	356, 1272
SapI	GCTCTTC	1 cut(s)	1260
SaqAI	TTAA	2 cut(s)	759, 1148
SatI	GCNGC	6 cut(s)	281, 301, 975, 1007, 1121, 1186
Sau3AI	GATC	8 cut(s)	316, 386, 441, 719, 1255, 1482, 1507, 1638
Sau96I	GGNCC	1 cut(s)	459
SchI	GAGTC	3 cut(s)	178, 685, 1862
ScrFI	CCNGG	3 cut(s)	384, 589, 923
SduI	GDGCHC	2 cut(s)	356, 1272
SfaNI	GCATC	3 cut(s)	198, 352, 1429
SfcI	CTRYAG	3 cut(s)	1600, 1660, 1805
SfoI	GGCGCC	1 cut(s)	1568
Sfr274I	CTCGAG	1 cut(s)	1010
SinI	GGWCC	1 cut(s)	459
SlaI	CTCGAG	1 cut(s)	1010
SmiMI	CAYNNNNRTG	2 cut(s)	1490, 1675
SmlI	CTYRAG	3 cut(s)	144, 758, 1010
SmoI	CTYRAG	3 cut(s)	144, 758, 1010
Sse9I	AATT	9 cut(s)	120, 158, 214, 227, 510, 915, 1000, 1217, 1883
SsiI	CCGC	2 cut(s)	365, 725
SspDI	GGCGCC	1 cut(s)	1566
SspI	AATATT	1 cut(s)	612
SspMI	CTAG	8 cut(s)	105, 1179, 1277, 1358, 1550, 1760, 1764, 1817
SstI	GAGCTC	2 cut(s)	356, 1272
StyD4I	CCNGG	3 cut(s)	382, 587, 921
StyI	CCWWGG	4 cut(s)	1296, 1306, 1549, 1652
TaaI	ACNGT	1 cut(s)	397
TaiI	ACGT	1 cut(s)	1877
TaqI	TCGA	5 cut(s)	175, 1011, 1258, 1488, 1822
TasI	AATT	9 cut(s)	120, 158, 214, 227, 510, 915, 1000, 1217, 1883
TatI	WGTACW	1 cut(s)	1365
TfiI	GAWTC	4 cut(s)	270, 911, 1721, 1922
Tru1I	TTAA	2 cut(s)	759, 1148
Tru9I	TTAA	2 cut(s)	759, 1148
TscAI	CASTG	5 cut(s)	280, 697, 889, 1081, 1630
TseFI	GTSAC	4 cut(s)	577, 709, 734, 893
TseI	GCWGC	6 cut(s)	280, 300, 974, 1006, 1120, 1185
Tsp45I	GTSAC	4 cut(s)	577, 709, 734, 893
TspDTI	ATGAA	8 cut(s)	45, 60, 297, 329, 361, 1170, 1230, 1364
TspGWI	ACGGA	1 cut(s)	688
TspRI	CASTG	5 cut(s)	280, 697, 889, 1081, 1630
Vha464I	CTTAAG	1 cut(s)	758
VpaK11BI	GGWCC	1 cut(s)	459
XapI	RAATTY	2 cut(s)	120, 227
XceI	RCATGY	1 cut(s)	869
XhoI	CTCGAG	1 cut(s)	1010
XmaJI	CCTAGG	1 cut(s)	1549
XmnI	GAANNNNTTC	1 cut(s)	1926
XspI	CTAG	8 cut(s)	105, 1179, 1277, 1358, 1550, 1760, 1764, 1817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.