Rorug06G0428800

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0003211
Physical Location & Seq
Reverse (-)
56492314 .. 56498277
5964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0428800.1

Sequence Viewer

Length: 2349 bp
ATGGACAAGCAGGTAGCTCGACGTGGACGAGGACGAGCCATTCGGTTTAAGCAATCCTCTGGACACAAGCTCTTCTCCGAAGAAAACAAATTCCGAGGAGTTTTCCTTGTTGGAGTTTTGCCTGCAGAGAAAACAAGAGCTGCTGCTGGCGACTTTGTGCTGCTTGAGAAATCGAAGAAGGAGAGGATTAGGAAATTGAGTACTATTGGTAGAGGAGCGACTTGTTCGAGCTTAGAAATGGGTTGTGATGATGTGTCTGATAGAGAAGATGAGGAGCTTCCCAGTAAGAGAATTAAGCTACCCACAAAGTCTATGGGTGACTGCAATGGCGTTCATCTACCCTCTGTGCCTCGGAAACTGCGTTCAGCAATGAAGAAGCGCCATCGTCAATCTACATCTCCGTCTTTATCAAATTCAAGGAAGCTACTGAGTGGCACTGAGTCTCTCAACTGCGATGGCGTAAAGAAGCCATGCTTGAAACAAGGAGATAGATCCCCTAAAAAGACTGTTTCTGGGCCTATCACAAAAGATGAGGAAGAAGTTGTGGAGACCTTGTATGCTTTGGCTGGATTGGTGTTCCCCAACAATGAAGCAAATGGTAATGGCAAAGTAGAATCTGAAACTTTAGATGCAAATGCTTCAGCTTTGCCAGAGTCAAAGAACAGTCCTGCGCCTGCAGTTGAAGTTGGAGACATCAAATTGGATCCAGTTTTCCCCTGTAGAGCTACCAGCTCCACCAGTCCATCTTACGTAGAAGGATTCACTAAAGGAACTGATCAAGTTGATTTATTGAACAATCCCAGTACTCATTATCAGCCTGAATTTCCCAACAGTGGCAAACTCTGTATAGACTCGAATAATAACGTCTCTCATAATCAAATAAACATTTCTTCCTTGTCAGCTAAGGTTGAACAGTGCAATGAAAAGCATTTCAGCAATGCTGCTGTCAACTTCCGTGATCCATCCGAGTTAAGCCTGGATAGTCGGTTAACGCAGACAGTGCAACAGCTGACCTCAGTTTTCAGTAGAAAACCAGAAATTGCAGTGGAGCTGGGCACGAACATTGGGAGTCAAGTTCAAAAACATGATATGCTCCAGGAATCCAGGAAGAAAGGATTGTGGCCTGGATTGGCTTCAAATGTCTCACATGGTGCTAAGAGTGATAGTCCACTTTTGCAGAGCCCTGCTGCTACAATGCCTCCCTGGATGGATGCTGTTTTGTCGACCTCCAGAGCATCAATCCAAAATGGTTCTTCTTTTGCAAAGGTTACGAAAGTTGTCAATGGTACAAGATCGTGTAAGAAATGTGCAGCTCATGTCTATATAAGTCATTTGATCCAGTCTCTAAAAAGCTCTGACAGCAAAGATCAGTTACTGCTACAACCTAGTCAAATGAGAGCACATGAAGGATCCGAACAAGGGGCTTTTTTGGGAGTTAATACCTATACTAATGTTAAAAGTGGTTTCAATGAGGTTGTTTCCAGCAGTAGCATAAGAATCTCTACTGCTGAAAAAGTTCCAAATGAAGCTAAGAACGGTATTCTTCAGCACAAGAAGCTCCATCTAGATCAGCCATCGTATACTTTGGCATCTGGGGCACACACATCACCAAAACAGATTTTTGATTTCCTTTCATTGTCAGCTGGAGGTGGTAGCTCAGAAAATAATGATAGTTTTAGTAGAGGTAGATATGCGATGGAGCCGTCGTCAGAAGCCCAAGTTCCTTATCTTCATTCTCCTGTGCAGCATCACAATTTCATTCCTTTCCCTTTGACCCGGTCTCGCTACAACTCTTCTGCTTCCCTTGACAGTCACCCACCAGTGGCACAGCAGGGCCAGCTGCTACCTTCATATGGCAACCCATTCTGTAGTTCTCAAGCAAATGCCACAGCCTTGACAAAACAACCAACACAACAGCAAAAATTACATCTGCAGCAGCAACAGCAACAACAATTTCATCTGCAGCAGCATCAGCAACAACAATTACATCTGCAGCAGCAACAGCAAAGGCTTTGGGCAGCTCGGTTCGCGGCTCAGTACAGGCCAGCGGGAACTCTGGCAGCCACAGCTCCCTCTCCGAGCTGGCAAAATATAAAGCAGGAGAACTGTACACTGATTCAATGTGGCCAAGCTCTCCTTTCTCCTTCCCCTTCAACACTTGAACTAGTTGGTCCCAAGTATGCACCACTAACTCATCATCAGCAGCAACAAATGGCAGTCACTTCTTTTCCTCCCGACAGGGTAAAACGGTCAGACCACCATCTGCCATCTGTGTATGAGGAGTCTGTAGGCGGGTACCGTGCTGCGAGTGCACTGCCATTGCAGTTGCTCTGCAATGAGCGCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000956 GO:0002682 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019222 GO:0019439 GO:0019538 GO:0019787 GO:0019941 GO:0022402 GO:0023052 GO:0030163 GO:0030330 GO:0031570 GO:0031571 GO:0032446 GO:0033554 GO:0034641 GO:0034655 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045595 GO:0045637 GO:0045652 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0051726 GO:0051865 GO:0060255 GO:0065007 GO:0070647 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0090068 GO:0090304 GO:0140096 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1903706 GO:2000026 GO:2000045 GO:2000134
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_4

Protein Analysis

782

Amino Acids

85.56

Weight (kDa)

9.26

Isoelectric Point (pI)

58.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2295
AccB1I GGYRCC 1 cut(s) 2295
AccI GTMKAC 2 cut(s) 1223, 1580
AccII CGCG 1 cut(s) 2030
AciI CCGC 3 cut(s) 2030, 2048, 2292
AclWI GGATC 7 cut(s) 486, 698, 711, 953, 1330, 1404, 1417
AcoI YGGCCR 1 cut(s) 2125
AcsI RAATTY 3 cut(s) 89, 412, 821
AcuI CTGAAG 2 cut(s) 624, 1529
AdeI CACNNNGTG 1 cut(s) 1151
AfaI GTAC 6 cut(s) 202, 805, 1288, 2039, 2110, 2297
AfiI CCNNNNNNNGG 4 cut(s) 833, 1419, 1822, 1853
AhlI ACTAGT 1 cut(s) 2164
AjiI CACGTC 1 cut(s) 23
AjnI CCWGG 5 cut(s) 975, 1095, 1103, 1123, 1202
AloI GAACNNNNNNTCC 2 cut(s) 346, 378
Alw21I GWGCWC 2 cut(s) 1402, 2314
Alw26I GTCTC 7 cut(s) 447, 542, 684, 871, 1147, 1347, 1785
Alw44I GTGCAC 1 cut(s) 2310
AlwI GGATC 7 cut(s) 486, 698, 711, 953, 1330, 1404, 1417
AlwNI CAGNNNCTG 1 cut(s) 1375
AoxI GGCC 5 cut(s) 515, 1121, 1834, 2042, 2125
ApaLI GTGCAC 1 cut(s) 2310
ApoI RAATTY 3 cut(s) 89, 412, 821
ArsI GACNNNNNNTTYG 2 cut(s) 24, 56
Asp700I GAANNNNTTC 1 cut(s) 1515
Asp718I GGTACC 1 cut(s) 2295
AspLEI GCGC 3 cut(s) 381, 673, 2343
AspS9I GGNCC 3 cut(s) 515, 1834, 2171
AsuC2I CCSGG 1 cut(s) 1777
AsuHPI GGTGA 3 cut(s) 329, 1599, 1805
AvaII GGWCC 1 cut(s) 2171
BaeGI GKGCMC 3 cut(s) 1058, 1600, 2314
BalI TGGCCA 1 cut(s) 2127
BamHI GGATCC 2 cut(s) 703, 1409
BanI GGYRCC 1 cut(s) 2295
BanII GRGCYC 1 cut(s) 1184
Bbv12I GWGCWC 2 cut(s) 1402, 2314
BceAI ACGGC 1 cut(s) 1687
BcgI CGANNNNNNTGC 3 cut(s) 33, 2296, 2330
BciT130I CCWGG 5 cut(s) 977, 1097, 1105, 1125, 1204
BclI TGATCA 1 cut(s) 775
BcnI CCSGG 1 cut(s) 1777
BcoDI GTCTC 7 cut(s) 447, 542, 684, 871, 1147, 1347, 1785
BcuI ACTAGT 1 cut(s) 2164
BfaI CTAG 3 cut(s) 1386, 1565, 2165
BfmI CTRYAG 8 cut(s) 123, 675, 718, 1867, 1931, 1961, 1991, 2286
BfoI RGCGCY 2 cut(s) 382, 2344
BmcAI AGTACT 2 cut(s) 202, 805
Bme1390I CCNGG 6 cut(s) 977, 1097, 1105, 1125, 1204, 1777
Bme18I GGWCC 1 cut(s) 2171
BmgBI CACGTC 1 cut(s) 23
BmgT120I GGNCC 3 cut(s) 515, 1834, 2171
BmiI GGNNCC 5 cut(s) 705, 1411, 1701, 2173, 2297
BmrFI CCNGG 6 cut(s) 977, 1097, 1105, 1125, 1204, 1777
BmrI ACTGGG 2 cut(s) 276, 795
BmsI GCATC 6 cut(s) 619, 1201, 1244, 1598, 1756, 1978
BmuI ACTGGG 2 cut(s) 276, 795
BpmI CTGGAG 3 cut(s) 1079, 1213, 1665
Bpu10I CCTNAGC 1 cut(s) 903
BpuEI CTTGAG 2 cut(s) 185, 1860
BpuMI CCSGG 1 cut(s) 1777
BsaAI YACGTR 1 cut(s) 751
BsaI GGTCTC 2 cut(s) 542, 1785
BsaJI CCNNGG 3 cut(s) 94, 350, 1202
BsaXI ACNNNNNCTCC 6 cut(s) 539, 569, 1183, 1213, 1691, 1721
Bsc4I CCNNNNNNNGG 4 cut(s) 833, 1419, 1822, 1853
Bse1I ACTGG 6 cut(s) 282, 707, 738, 801, 1339, 1820
Bse3DI GCAATG 6 cut(s) 331, 375, 925, 943, 2318, 2341
BseBI CCWGG 5 cut(s) 977, 1097, 1105, 1125, 1204
BseDI CCNNGG 3 cut(s) 94, 350, 1202
BseGI GGATG 3 cut(s) 962, 1212, 1216
BseLI CCNNNNNNNGG 4 cut(s) 833, 1419, 1822, 1853
BseMI GCAATG 6 cut(s) 331, 375, 925, 943, 2318, 2341
BseMII CTCAG 5 cut(s) 419, 429, 1029, 1671, 2048
BseNI ACTGG 6 cut(s) 282, 707, 738, 801, 1339, 1820
BseRI GAGGAG 4 cut(s) 111, 228, 287, 2294
BseSI GKGCMC 3 cut(s) 1058, 1600, 2314
BseYI CCCAGC 1 cut(s) 1051
BsgI GTGCAG 2 cut(s) 1329, 1763
Bsh1236I CGCG 1 cut(s) 2030
BshFI GGCC 5 cut(s) 517, 1123, 1836, 2044, 2127
BshNI GGYRCC 1 cut(s) 2295
BsiHKAI GWGCWC 2 cut(s) 1402, 2314
BsiSI CCGG 1 cut(s) 1777
BslFI GGGAC 1 cut(s) 2157
BslI CCNNNNNNNGG 4 cut(s) 833, 1419, 1822, 1853
BsmAI GTCTC 7 cut(s) 447, 542, 684, 871, 1147, 1347, 1785
BsmBI CGTCTC 1 cut(s) 871
BsmFI GGGAC 1 cut(s) 2157
BsnI GGCC 5 cut(s) 517, 1123, 1836, 2044, 2127
Bso31I GGTCTC 2 cut(s) 542, 1785
Bsp1286I GDGCHC 5 cut(s) 1058, 1184, 1402, 1600, 2314
Bsp1407I TGTACA 1 cut(s) 2108
Bsp143I GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
BspACI CCGC 3 cut(s) 2030, 2048, 2292
BspANI GGCC 5 cut(s) 517, 1123, 1836, 2044, 2127
BspCNI CTCAG 5 cut(s) 420, 430, 1028, 1670, 2047
BspFNI CGCG 1 cut(s) 2030
BspLI GGNNCC 5 cut(s) 705, 1411, 1701, 2173, 2297
BspMAI CTGCAG 5 cut(s) 127, 679, 1935, 1965, 1995
BspPI GGATC 7 cut(s) 486, 698, 711, 953, 1330, 1404, 1417
BspQI GCTCTTC 1 cut(s) 77
BspT107I GGYRCC 1 cut(s) 2295
BspTNI GGTCTC 2 cut(s) 542, 1785
BsrDI GCAATG 6 cut(s) 331, 375, 925, 943, 2318, 2341
BsrGI TGTACA 1 cut(s) 2108
BsrI ACTGG 6 cut(s) 282, 707, 738, 801, 1339, 1820
BssECI CCNNGG 3 cut(s) 94, 350, 1202
BssMI GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
BssNAI GTATAC 1 cut(s) 1581
Bst1107I GTATAC 1 cut(s) 1581
Bst2UI CCWGG 5 cut(s) 977, 1097, 1105, 1125, 1204
Bst6I CTCTTC 2 cut(s) 77, 1798
BstAPI GCANNNNNTGC 1 cut(s) 1000
BstAUI TGTACA 1 cut(s) 2108
BstBAI YACGTR 1 cut(s) 751
BstC8I GCNNGC 6 cut(s) 123, 148, 675, 1838, 2046, 2084
BstDEI CTNAG 9 cut(s) 232, 428, 438, 903, 1015, 1155, 1530, 1657, 2034
BstF5I GGATG 3 cut(s) 962, 1212, 1216
BstFNI CGCG 1 cut(s) 2030
BstH2I RGCGCY 2 cut(s) 382, 2344
BstHHI GCGC 3 cut(s) 381, 673, 2343
BstKTI GATC 9 cut(s) 494, 706, 778, 961, 1295, 1338, 1369, 1412, 1570
BstMAI GTCTC 7 cut(s) 447, 542, 684, 871, 1147, 1347, 1785
BstMBI GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
BstNI CCWGG 5 cut(s) 977, 1097, 1105, 1125, 1204
BstSCI CCNGG 6 cut(s) 975, 1095, 1103, 1123, 1202, 1775
BstSFI CTRYAG 8 cut(s) 123, 675, 718, 1867, 1931, 1961, 1991, 2286
BstSLI GKGCMC 3 cut(s) 1058, 1600, 2314
BstSNI TACGTA 1 cut(s) 751
BstUI CGCG 1 cut(s) 2030
BstX2I RGATCY 3 cut(s) 491, 703, 1409
BstYI RGATCY 3 cut(s) 491, 703, 1409
BstZ17I GTATAC 1 cut(s) 1581
BsuRI GGCC 5 cut(s) 517, 1123, 1836, 2044, 2127
BtgZI GCGATG 2 cut(s) 468, 1709
BtrI CACGTC 1 cut(s) 23
BtsCI GGATG 3 cut(s) 962, 1212, 1216
BtsI GCAGTG 2 cut(s) 1050, 2312
BtsIMutI CAGTG 8 cut(s) 435, 838, 920, 1005, 1050, 1827, 2111, 2312
Cac8I GCNNGC 6 cut(s) 123, 148, 675, 1838, 2046, 2084
CaiI CAGNNNCTG 1 cut(s) 1375
CfoI GCGC 3 cut(s) 381, 673, 2343
Cfr13I GGNCC 3 cut(s) 515, 1834, 2171
Csp6I GTAC 6 cut(s) 201, 804, 1287, 2038, 2109, 2296
CviAII CATG 5 cut(s) 471, 1085, 1148, 1316, 1403
CviQI GTAC 6 cut(s) 201, 804, 1287, 2038, 2109, 2296
DdeI CTNAG 9 cut(s) 232, 428, 438, 903, 1015, 1155, 1530, 1657, 2034
DpnI GATC 9 cut(s) 493, 705, 777, 960, 1294, 1337, 1368, 1411, 1569
DpnII GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
DraIII CACNNNGTG 1 cut(s) 1151
EaeI YGGCCR 1 cut(s) 2125
Eam1104I CTCTTC 2 cut(s) 77, 1798
EarI CTCTTC 2 cut(s) 77, 1798
Eco105I TACGTA 1 cut(s) 751
Eco24I GRGCYC 1 cut(s) 1184
Eco31I GGTCTC 2 cut(s) 542, 1785
Eco47I GGWCC 1 cut(s) 2171
Eco57I CTGAAG 2 cut(s) 624, 1529
EcoRII CCWGG 5 cut(s) 975, 1095, 1103, 1123, 1202
EcoT38I GRGCYC 1 cut(s) 1184
Esp3I CGTCTC 1 cut(s) 871
FaeI CATG 5 cut(s) 474, 1088, 1151, 1319, 1406
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 2121, 2153
FaqI GGGAC 1 cut(s) 2157
FatI CATG 5 cut(s) 470, 1084, 1147, 1315, 1402
FauI CCCGC 2 cut(s) 2041, 2285
FauNDI CATATG 1 cut(s) 1852
FbaI TGATCA 1 cut(s) 775
FblI GTMKAC 2 cut(s) 1223, 1580
FokI GGATG 3 cut(s) 949, 1219, 1223
FriOI GRGCYC 1 cut(s) 1184
FspBI CTAG 3 cut(s) 1386, 1565, 2165
GlaI GCGC 3 cut(s) 380, 672, 2342
GsaI CCCAGC 1 cut(s) 1055
GsuI CTGGAG 3 cut(s) 1079, 1213, 1665
HaeII RGCGCY 2 cut(s) 382, 2344
HaeIII GGCC 5 cut(s) 517, 1123, 1836, 2044, 2127
HapII CCGG 1 cut(s) 1777
HhaI GCGC 3 cut(s) 381, 673, 2343
Hin1II CATG 5 cut(s) 474, 1088, 1151, 1319, 1406
Hin6I GCGC 3 cut(s) 379, 671, 2341
HinP1I GCGC 3 cut(s) 379, 671, 2341
HincII GTYRAC 3 cut(s) 949, 990, 1224
HindII GTYRAC 3 cut(s) 949, 990, 1224
HpaI GTTAAC 1 cut(s) 990
HpaII CCGG 1 cut(s) 1777
HphI GGTGA 3 cut(s) 329, 1599, 1805
Hpy166II GTNNAC 8 cut(s) 26, 949, 990, 1169, 1224, 1581, 2111, 2312
Hpy188III TCNNGA 4 cut(s) 60, 1230, 1565, 2234
Hpy8I GTNNAC 8 cut(s) 26, 949, 990, 1169, 1224, 1581, 2111, 2312
Hpy99I CGWCG 2 cut(s) 24, 1708
HpyAV CCTTC 6 cut(s) 172, 749, 1400, 1857, 2154, 2160
HpyCH4IV ACGT 3 cut(s) 22, 750, 864
HpyF3I CTNAG 9 cut(s) 232, 428, 438, 903, 1015, 1155, 1530, 1657, 2034
HpySE526I ACGT 3 cut(s) 22, 750, 864
Hsp92II CATG 5 cut(s) 474, 1088, 1151, 1319, 1406
HspAI GCGC 3 cut(s) 379, 671, 2341
KpnI GGTACC 1 cut(s) 2299
Ksp22I TGATCA 1 cut(s) 775
KspAI GTTAAC 1 cut(s) 990
Kzo9I GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
LguI GCTCTTC 1 cut(s) 77
LmnI GCTCC 8 cut(s) 215, 274, 737, 1048, 1098, 1563, 1699, 2074
LweI GCATC 6 cut(s) 619, 1201, 1244, 1598, 1756, 1978
MaeI CTAG 3 cut(s) 1386, 1565, 2165
MaeII ACGT 3 cut(s) 22, 750, 864
MaeIII GTNAC 5 cut(s) 317, 1267, 1371, 1811, 2218
MalI GATC 9 cut(s) 493, 705, 777, 960, 1294, 1337, 1368, 1411, 1569
MboI GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
MflI RGATCY 3 cut(s) 491, 703, 1409
MhlI GDGCHC 5 cut(s) 1058, 1184, 1402, 1600, 2314
MlsI TGGCCA 1 cut(s) 2127
MluNI TGGCCA 1 cut(s) 2127
MlyI GAGTC 5 cut(s) 449, 662, 845, 1078, 2291
MmeI TCCRAC 2 cut(s) 91, 667
Mox20I TGGCCA 1 cut(s) 2127
MroXI GAANNNNTTC 1 cut(s) 1515
MscI TGGCCA 1 cut(s) 2127
MseI TTAA 6 cut(s) 48, 294, 971, 989, 1437, 1455
Msp20I TGGCCA 1 cut(s) 2127
MspA1I CMGCKG 4 cut(s) 1009, 1643, 1840, 2048
MspI CCGG 1 cut(s) 1777
MspR9I CCNGG 6 cut(s) 977, 1097, 1105, 1125, 1204, 1777
MvaI CCWGG 5 cut(s) 977, 1097, 1105, 1125, 1204
MvnI CGCG 1 cut(s) 2030
NciI CCSGG 1 cut(s) 1777
NdeI CATATG 1 cut(s) 1852
NdeII GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
NlaIII CATG 5 cut(s) 474, 1088, 1151, 1319, 1406
NlaIV GGNNCC 5 cut(s) 705, 1411, 1701, 2173, 2297
NmuCI GTSAC 3 cut(s) 317, 1811, 2218
PciSI GCTCTTC 1 cut(s) 77
PcsI WCGNNNNNNNCGW 2 cut(s) 25, 358
PdmI GAANNNNTTC 1 cut(s) 1515
PfeI GAWTC 5 cut(s) 614, 759, 1100, 1497, 2116
PflFI GACNNNGTC 1 cut(s) 1777
PfoI TCCNGGA 2 cut(s) 1095, 1103
PleI GAGTC 5 cut(s) 448, 661, 845, 1077, 2290
PpsI GAGTC 5 cut(s) 448, 661, 845, 1077, 2290
Ppu21I YACGTR 1 cut(s) 751
Psp6I CCWGG 5 cut(s) 975, 1095, 1103, 1123, 1202
PspFI CCCAGC 1 cut(s) 1051
PspGI CCWGG 5 cut(s) 975, 1095, 1103, 1123, 1202
PspN4I GGNNCC 5 cut(s) 705, 1411, 1701, 2173, 2297
PspPI GGNCC 3 cut(s) 515, 1834, 2171
PstI CTGCAG 5 cut(s) 127, 679, 1935, 1965, 1995
PstNI CAGNNNCTG 1 cut(s) 1375
PsuI RGATCY 3 cut(s) 491, 703, 1409
PsyI GACNNNGTC 1 cut(s) 1777
PvuII CAGCTG 3 cut(s) 1009, 1643, 1840
RsaI GTAC 6 cut(s) 202, 805, 1288, 2039, 2110, 2297
RsaNI GTAC 6 cut(s) 201, 804, 1287, 2038, 2109, 2296
SalI GTCGAC 1 cut(s) 1222
SapI GCTCTTC 1 cut(s) 77
SaqAI TTAA 6 cut(s) 48, 294, 971, 989, 1437, 1455
Sau3AI GATC 9 cut(s) 491, 703, 775, 958, 1292, 1335, 1366, 1409, 1567
Sau96I GGNCC 3 cut(s) 515, 1834, 2171
ScaI AGTACT 2 cut(s) 202, 805
SchI GAGTC 5 cut(s) 449, 662, 845, 1078, 2291
ScrFI CCNGG 6 cut(s) 977, 1097, 1105, 1125, 1204, 1777
SduI GDGCHC 5 cut(s) 1058, 1184, 1402, 1600, 2314
SfaNI GCATC 6 cut(s) 619, 1201, 1244, 1598, 1756, 1978
SfcI CTRYAG 8 cut(s) 123, 675, 718, 1867, 1931, 1961, 1991, 2286
SinI GGWCC 1 cut(s) 2171
SmlI CTYRAG 2 cut(s) 164, 1875
SmoI CTYRAG 2 cut(s) 164, 1875
SnaBI TACGTA 1 cut(s) 751
SpeI ACTAGT 1 cut(s) 2164
SsiI CCGC 3 cut(s) 2030, 2048, 2292
SspMI CTAG 3 cut(s) 1386, 1565, 2165
StyD4I CCNGG 6 cut(s) 975, 1095, 1103, 1123, 1202, 1775
TaiI ACGT 3 cut(s) 25, 753, 867
TaqI TCGA 5 cut(s) 19, 173, 227, 854, 1223
TatI WGTACW 4 cut(s) 200, 803, 2037, 2108
TauI GCSGC 1 cut(s) 2033
TfiI GAWTC 5 cut(s) 614, 759, 1100, 1497, 2116
Tru1I TTAA 6 cut(s) 48, 294, 971, 989, 1437, 1455
Tru9I TTAA 6 cut(s) 48, 294, 971, 989, 1437, 1455
TscAI CASTG 8 cut(s) 442, 838, 920, 1005, 1050, 1827, 2118, 2319
TseFI GTSAC 3 cut(s) 317, 1811, 2218
Tsp45I GTSAC 3 cut(s) 317, 1811, 2218
TspGWI ACGGA 2 cut(s) 390, 944
TspRI CASTG 8 cut(s) 442, 838, 920, 1005, 1050, 1827, 2118, 2319
Tth111I GACNNNGTC 1 cut(s) 1777
VneI GTGCAC 1 cut(s) 2310
VpaK11BI GGWCC 1 cut(s) 2171
XapI RAATTY 3 cut(s) 89, 412, 821
XbaI TCTAGA 1 cut(s) 1564
XcmI CCANNNNNNNNNTGG 1 cut(s) 310
XmiI GTMKAC 2 cut(s) 1223, 1580
XmnI GAANNNNTTC 1 cut(s) 1515
XspI CTAG 3 cut(s) 1386, 1565, 2165
ZrmI AGTACT 2 cut(s) 202, 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.