Formin Homology 2 Domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24150 AT1G59910 AT1G70140 |
| fragaria_vesca | FvH4_4g35240 FvH4_5g16231 |
| malus_domestica | MD06G1182500.v1.1 MD13G1085100.v1.1 MD14G1188500.v1.1 MD16G1084300.v1.1 |
| prunus_persica | Prupe.1G261700_v2.0.a1 Prupe.5G180600_v2.0.a1 |
| pyrus_communis | pycom06g16140 pycom13g07360 |
| rosa_chinensis | RchiOBHm_Chr4g0444841 RchiOBHm_Chr7g0179861 |
| rosa_laevigata | RLG00000005317 RLG00000005796 |
| rosa_multiflora | Rmu_sc0000096.1_g000028 Rmu_sc0001754.1_g000001 Rmu_sc0006845.1_g000009 Rmu_sc0031375.1_g000001 Rmu_sc0034891.1_g000002 Rmu_sc0034892.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00273390 Rroxscaffold_5G00385330 |
| rosa_rugosa | Rorug04G0355500 Rorug06G0428800 |
| rosa_samantha | Rh4AG417000 Rh4BG428800 Rh4CG443600 Rh4DG424800 Rh7AG028700 Rh7BG027900 Rh7CG029600 Rh7DG029000 |
| rosa_wichuraiana | Rw4G035740 Rw7G002300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1349 |
| Acc16I | TGCGCA | 1 cut(s) | 584 |
| AccB1I | GGYRCC | 2 cut(s) | 910, 1277 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1158 |
| AccI | GTMKAC | 1 cut(s) | 1025 |
| AccII | CGCG | 2 cut(s) | 908, 1663 |
| AciI | CCGC | 9 cut(s) | 370, 854, 860, 906, 908, 965, 968, 1551, 2400 |
| AclI | AACGTT | 1 cut(s) | 1284 |
| AclWI | GGATC | 4 cut(s) | 459, 734, 1484, 2334 |
| AcoI | YGGCCR | 1 cut(s) | 103 |
| AcsI | RAATTY | 4 cut(s) | 481, 2343, 2449, 2464 |
| AcuI | CTGAAG | 4 cut(s) | 660, 1124, 1473, 1564 |
| AfaI | GTAC | 2 cut(s) | 403, 1481 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 596, 1028, 1158, 1233, 1785, 1988 |
| AgeI | ACCGGT | 1 cut(s) | 1233 |
| AhlI | ACTAGT | 1 cut(s) | 404 |
| AjnI | CCWGG | 1 cut(s) | 1319 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 175, 207, 1197, 1229 |
| AleI | CACNNNNGTG | 1 cut(s) | 317 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2091, 2123 |
| Alw21I | GWGCWC | 2 cut(s) | 1392, 2477 |
| Alw26I | GTCTC | 2 cut(s) | 1245, 1412 |
| AlwI | GGATC | 4 cut(s) | 459, 734, 1484, 2334 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 34 |
| AoxI | GGCC | 4 cut(s) | 103, 427, 431, 1031 |
| ApoI | RAATTY | 4 cut(s) | 481, 2343, 2449, 2464 |
| AseI | ATTAAT | 2 cut(s) | 384, 609 |
| AsiGI | ACCGGT | 1 cut(s) | 1233 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 563, 700, 1836 |
| AspLEI | GCGC | 3 cut(s) | 250, 299, 585 |
| AspS9I | GGNCC | 2 cut(s) | 1031, 1289 |
| AsuHPI | GGTGA | 7 cut(s) | 626, 1061, 1205, 1287, 2203, 2386, 2400 |
| AsuII | TTCGAA | 2 cut(s) | 1657, 1768 |
| AvaII | GGWCC | 1 cut(s) | 1289 |
| BaeGI | GKGCMC | 1 cut(s) | 2278 |
| BalI | TGGCCA | 1 cut(s) | 105 |
| BanI | GGYRCC | 2 cut(s) | 910, 1277 |
| BbsI | GAAGAC | 4 cut(s) | 252, 693, 1062, 2375 |
| Bbv12I | GWGCWC | 2 cut(s) | 1392, 2477 |
| BbvCI | CCTCAGC | 1 cut(s) | 435 |
| BccI | CCATC | 8 cut(s) | 470, 940, 1036, 1166, 1184, 1300, 1790, 2209 |
| BciT130I | CCWGG | 1 cut(s) | 1321 |
| BciVI | GTATCC | 1 cut(s) | 1319 |
| BcoDI | GTCTC | 2 cut(s) | 1245, 1412 |
| BcuI | ACTAGT | 1 cut(s) | 404 |
| BfaI | CTAG | 8 cut(s) | 140, 405, 1313, 1437, 1640, 1685, 2315, 2469 |
| BfmI | CTRYAG | 2 cut(s) | 303, 2034 |
| BfuI | GTATCC | 1 cut(s) | 1319 |
| BglII | AGATCT | 1 cut(s) | 1302 |
| BlpI | GCTNAGC | 1 cut(s) | 2065 |
| Bme1390I | CCNGG | 1 cut(s) | 1321 |
| Bme18I | GGWCC | 1 cut(s) | 1289 |
| BmgT120I | GGNCC | 2 cut(s) | 1031, 1289 |
| BmiI | GGNNCC | 6 cut(s) | 418, 912, 1032, 1279, 2420, 2432 |
| BmrFI | CCNGG | 1 cut(s) | 1321 |
| BmsI | GCATC | 5 cut(s) | 625, 1306, 1498, 1634, 2004 |
| BpiI | GAAGAC | 4 cut(s) | 252, 693, 1062, 2375 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 536, 568 |
| BpmI | CTGGAG | 4 cut(s) | 129, 135, 141, 550 |
| Bpu10I | CCTNAGC | 1 cut(s) | 435 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2065 |
| Bpu14I | TTCGAA | 2 cut(s) | 1657, 1768 |
| BpuEI | CTTGAG | 6 cut(s) | 752, 1496, 1598, 1682, 1903, 1939 |
| BsaAI | YACGTR | 1 cut(s) | 998 |
| BsaBI | GATNNNNATC | 2 cut(s) | 744, 1307 |
| BsaJI | CCNNGG | 4 cut(s) | 421, 906, 1152, 2414 |
| BsaWI | WCCGGW | 1 cut(s) | 1233 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 841, 871 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 596, 1028, 1158, 1233, 1785, 1988 |
| Bse118I | RCCGGY | 2 cut(s) | 429, 1233 |
| Bse1I | ACTGG | 2 cut(s) | 233, 533 |
| Bse3DI | GCAATG | 3 cut(s) | 194, 463, 1335 |
| Bse8I | GATNNNNATC | 2 cut(s) | 744, 1307 |
| BseBI | CCWGG | 1 cut(s) | 1321 |
| BseDI | CCNNGG | 4 cut(s) | 421, 906, 1152, 2414 |
| BseGI | GGATG | 6 cut(s) | 263, 523, 707, 1047, 1649, 2396 |
| BseJI | GATNNNNATC | 2 cut(s) | 744, 1307 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 596, 1028, 1158, 1233, 1785, 1988 |
| BseMI | GCAATG | 3 cut(s) | 194, 463, 1335 |
| BseMII | CTCAG | 9 cut(s) | 449, 703, 1157, 1771, 1836, 1917, 1995, 2079, 2502 |
| BseNI | ACTGG | 2 cut(s) | 233, 533 |
| BseRI | GAGGAG | 4 cut(s) | 816, 819, 912, 963 |
| BseSI | GKGCMC | 1 cut(s) | 2278 |
| BsgI | GTGCAG | 1 cut(s) | 945 |
| Bsh1236I | CGCG | 2 cut(s) | 908, 1663 |
| BshFI | GGCC | 4 cut(s) | 105, 429, 433, 1033 |
| BshNI | GGYRCC | 2 cut(s) | 910, 1277 |
| BshTI | ACCGGT | 1 cut(s) | 1233 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1392, 2477 |
| BsiSI | CCGG | 2 cut(s) | 430, 1234 |
| BslFI | GGGAC | 5 cut(s) | 1133, 1175, 1312, 1529, 2071 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 596, 1028, 1158, 1233, 1785, 1988 |
| BsmAI | GTCTC | 2 cut(s) | 1245, 1412 |
| BsmFI | GGGAC | 5 cut(s) | 1133, 1175, 1312, 1529, 2071 |
| BsmI | GAATGC | 3 cut(s) | 1147, 1520, 1723 |
| BsnI | GGCC | 4 cut(s) | 105, 429, 433, 1033 |
| Bsp119I | TTCGAA | 2 cut(s) | 1657, 1768 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1392, 2278, 2477 |
| Bsp143I | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2065 |
| Bsp19I | CCATGG | 1 cut(s) | 1152 |
| BspACI | CCGC | 9 cut(s) | 370, 854, 860, 906, 908, 965, 968, 1551, 2400 |
| BspANI | GGCC | 4 cut(s) | 105, 429, 433, 1033 |
| BspCNI | CTCAG | 9 cut(s) | 448, 702, 1156, 1770, 1837, 1918, 1996, 2078, 2501 |
| BspFNI | CGCG | 2 cut(s) | 908, 1663 |
| BspLI | GGNNCC | 6 cut(s) | 418, 912, 1032, 1279, 2420, 2432 |
| BspMAI | CTGCAG | 1 cut(s) | 307 |
| BspPI | GGATC | 4 cut(s) | 459, 734, 1484, 2334 |
| BspQI | GCTCTTC | 2 cut(s) | 1583, 2172 |
| BspT104I | TTCGAA | 2 cut(s) | 1657, 1768 |
| BspT107I | GGYRCC | 2 cut(s) | 910, 1277 |
| BsrDI | GCAATG | 3 cut(s) | 194, 463, 1335 |
| BsrFI | RCCGGY | 2 cut(s) | 429, 1233 |
| BsrI | ACTGG | 2 cut(s) | 233, 533 |
| BssAI | RCCGGY | 2 cut(s) | 429, 1233 |
| BssECI | CCNNGG | 4 cut(s) | 421, 906, 1152, 2414 |
| BssMI | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| BssT1I | CCWWGG | 3 cut(s) | 421, 1152, 2414 |
| Bst2UI | CCWGG | 1 cut(s) | 1321 |
| Bst4CI | ACNGT | 8 cut(s) | 77, 354, 1023, 1671, 1857, 2188, 2374, 2483 |
| Bst6I | CTCTTC | 7 cut(s) | 537, 554, 1583, 1770, 1815, 2172, 2357 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 34 |
| BstBAI | YACGTR | 1 cut(s) | 998 |
| BstBI | TTCGAA | 2 cut(s) | 1657, 1768 |
| BstC8I | GCNNGC | 5 cut(s) | 243, 310, 431, 1434, 1503 |
| BstDSI | CCRYGG | 2 cut(s) | 906, 1152 |
| BstEII | GGTNACC | 1 cut(s) | 1193 |
| BstF5I | GGATG | 6 cut(s) | 263, 523, 707, 1047, 1649, 2396 |
| BstFNI | CGCG | 2 cut(s) | 908, 1663 |
| BstHHI | GCGC | 3 cut(s) | 250, 299, 585 |
| BstKTI | GATC | 7 cut(s) | 454, 742, 758, 815, 1305, 1492, 2329 |
| BstMAI | GTCTC | 2 cut(s) | 1245, 1412 |
| BstMBI | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| BstNI | CCWGG | 1 cut(s) | 1321 |
| BstNSI | RCATGY | 2 cut(s) | 2064, 2337 |
| BstPI | GGTNACC | 1 cut(s) | 1193 |
| BstSCI | CCNGG | 1 cut(s) | 1319 |
| BstSFI | CTRYAG | 2 cut(s) | 303, 2034 |
| BstSLI | GKGCMC | 1 cut(s) | 2278 |
| BstUI | CGCG | 2 cut(s) | 908, 1663 |
| BstV2I | GAAGAC | 4 cut(s) | 252, 693, 1062, 2375 |
| BstX2I | RGATCY | 2 cut(s) | 1302, 1489 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1116 |
| BstYI | RGATCY | 2 cut(s) | 1302, 1489 |
| BsuI | GTATCC | 1 cut(s) | 1319 |
| BsuRI | GGCC | 4 cut(s) | 105, 429, 433, 1033 |
| BtgI | CCRYGG | 2 cut(s) | 906, 1152 |
| BtsCI | GGATG | 6 cut(s) | 263, 523, 707, 1047, 1649, 2396 |
| BtsI | GCAGTG | 4 cut(s) | 297, 403, 1109, 1798 |
| BtsIMutI | CAGTG | 7 cut(s) | 240, 297, 403, 1109, 1798, 2005, 2488 |
| Cac8I | GCNNGC | 5 cut(s) | 243, 310, 431, 1434, 1503 |
| CaiI | CAGNNNCTG | 1 cut(s) | 34 |
| CfoI | GCGC | 3 cut(s) | 250, 299, 585 |
| Cfr10I | RCCGGY | 2 cut(s) | 429, 1233 |
| Cfr13I | GGNCC | 2 cut(s) | 1031, 1289 |
| Cfr42I | CCGCGG | 1 cut(s) | 909 |
| Csp6I | GTAC | 2 cut(s) | 402, 1480 |
| CspAI | ACCGGT | 1 cut(s) | 1233 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 273, 308, 1483, 1518, 2064, 2099, 2110, 2145 |
| CviQI | GTAC | 2 cut(s) | 402, 1480 |
| DpnI | GATC | 7 cut(s) | 453, 741, 757, 814, 1304, 1491, 2328 |
| DpnII | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| EaeI | YGGCCR | 1 cut(s) | 103 |
| Eam1104I | CTCTTC | 7 cut(s) | 537, 554, 1583, 1770, 1815, 2172, 2357 |
| EarI | CTCTTC | 7 cut(s) | 537, 554, 1583, 1770, 1815, 2172, 2357 |
| EciI | GGCGGA | 1 cut(s) | 849 |
| Eco130I | CCWWGG | 3 cut(s) | 421, 1152, 2414 |
| Eco47I | GGWCC | 1 cut(s) | 1289 |
| Eco57I | CTGAAG | 4 cut(s) | 660, 1124, 1473, 1564 |
| Eco91I | GGTNACC | 1 cut(s) | 1193 |
| EcoO65I | GGTNACC | 1 cut(s) | 1193 |
| EcoRII | CCWGG | 1 cut(s) | 1319 |
| EcoT14I | CCWWGG | 3 cut(s) | 421, 1152, 2414 |
| ErhI | CCWWGG | 3 cut(s) | 421, 1152, 2414 |
| FaqI | GGGAC | 5 cut(s) | 1133, 1175, 1312, 1529, 2071 |
| FauI | CCCGC | 1 cut(s) | 913 |
| FblI | GTMKAC | 1 cut(s) | 1025 |
| FokI | GGATG | 6 cut(s) | 250, 530, 694, 1054, 1656, 2383 |
| FseI | GGCCGGCC | 1 cut(s) | 433 |
| FspBI | CTAG | 8 cut(s) | 140, 405, 1313, 1437, 1640, 1685, 2315, 2469 |
| FspI | TGCGCA | 1 cut(s) | 584 |
| GlaI | GCGC | 3 cut(s) | 249, 298, 584 |
| GsuI | CTGGAG | 4 cut(s) | 129, 135, 141, 550 |
| HaeIII | GGCC | 4 cut(s) | 105, 429, 433, 1033 |
| HapII | CCGG | 2 cut(s) | 430, 1234 |
| HhaI | GCGC | 3 cut(s) | 250, 299, 585 |
| Hin6I | GCGC | 3 cut(s) | 248, 297, 583 |
| HinP1I | GCGC | 3 cut(s) | 248, 297, 583 |
| HincII | GTYRAC | 1 cut(s) | 207 |
| HindII | GTYRAC | 1 cut(s) | 207 |
| HindIII | AAGCTT | 3 cut(s) | 536, 1430, 1746 |
| HinfI | GANTC | 9 cut(s) | 13, 745, 1067, 1420, 1603, 1619, 1885, 1930, 2486 |
| HpaII | CCGG | 2 cut(s) | 430, 1234 |
| HphI | GGTGA | 7 cut(s) | 626, 1061, 1205, 1287, 2203, 2386, 2400 |
| Hpy166II | GTNNAC | 4 cut(s) | 207, 1026, 1058, 1267 |
| Hpy188III | TCNNGA | 7 cut(s) | 515, 1077, 1424, 1731, 2162, 2349, 2460 |
| Hpy8I | GTNNAC | 4 cut(s) | 207, 1026, 1058, 1267 |
| Hpy99I | CGWCG | 1 cut(s) | 1784 |
| HpyAV | CCTTC | 7 cut(s) | 98, 201, 635, 645, 846, 2017, 2146 |
| HpyCH4III | ACNGT | 8 cut(s) | 77, 354, 1023, 1671, 1857, 2188, 2374, 2483 |
| HpyCH4IV | ACGT | 3 cut(s) | 997, 1284, 1782 |
| HpySE526I | ACGT | 3 cut(s) | 997, 1284, 1782 |
| HspAI | GCGC | 3 cut(s) | 248, 297, 583 |
| KroI | GCCGGC | 1 cut(s) | 429 |
| KroNI | GCCGGC | 1 cut(s) | 431 |
| KspI | CCGCGG | 1 cut(s) | 909 |
| Kzo9I | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| LguI | GCTCTTC | 2 cut(s) | 1583, 2172 |
| LmnI | GCTCC | 9 cut(s) | 148, 154, 160, 166, 184, 1079, 1788, 1890, 2472 |
| LweI | GCATC | 5 cut(s) | 625, 1306, 1498, 1634, 2004 |
| MaeI | CTAG | 8 cut(s) | 140, 405, 1313, 1437, 1640, 1685, 2315, 2469 |
| MaeII | ACGT | 3 cut(s) | 997, 1284, 1782 |
| MaeIII | GTNAC | 3 cut(s) | 1193, 2374, 2483 |
| MalI | GATC | 7 cut(s) | 453, 741, 757, 814, 1304, 1491, 2328 |
| MboI | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| MfeI | CAATTG | 2 cut(s) | 939, 1341 |
| MflI | RGATCY | 2 cut(s) | 1302, 1489 |
| MhlI | GDGCHC | 3 cut(s) | 1392, 2278, 2477 |
| MlsI | TGGCCA | 1 cut(s) | 105 |
| MluNI | TGGCCA | 1 cut(s) | 105 |
| MlyI | GAGTC | 5 cut(s) | 1076, 1414, 1628, 1894, 2480 |
| MmeI | TCCRAC | 4 cut(s) | 373, 1803, 1868, 1969 |
| Mox20I | TGGCCA | 1 cut(s) | 105 |
| MroNI | GCCGGC | 1 cut(s) | 429 |
| MroXI | GAANNNNTTC | 3 cut(s) | 563, 700, 1836 |
| MscI | TGGCCA | 1 cut(s) | 105 |
| MseI | TTAA | 5 cut(s) | 384, 486, 609, 1566, 2304 |
| MslI | CAYNNNNRTG | 2 cut(s) | 317, 717 |
| Msp20I | TGGCCA | 1 cut(s) | 105 |
| MspA1I | CMGCKG | 4 cut(s) | 31, 245, 908, 2030 |
| MspI | CCGG | 2 cut(s) | 430, 1234 |
| MspR9I | CCNGG | 1 cut(s) | 1321 |
| MunI | CAATTG | 2 cut(s) | 939, 1341 |
| Mva1269I | GAATGC | 3 cut(s) | 1147, 1520, 1723 |
| MvaI | CCWGG | 1 cut(s) | 1321 |
| MvnI | CGCG | 2 cut(s) | 908, 1663 |
| NaeI | GCCGGC | 1 cut(s) | 431 |
| NcoI | CCATGG | 1 cut(s) | 1152 |
| NdeII | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| NgoMIV | GCCGGC | 1 cut(s) | 429 |
| NlaIV | GGNNCC | 6 cut(s) | 418, 912, 1032, 1279, 2420, 2432 |
| NmuCI | GTSAC | 3 cut(s) | 1193, 2374, 2483 |
| NsbI | TGCGCA | 1 cut(s) | 584 |
| NspI | RCATGY | 2 cut(s) | 2064, 2337 |
| NspV | TTCGAA | 2 cut(s) | 1657, 1768 |
| OliI | CACNNNNGTG | 1 cut(s) | 317 |
| PciSI | GCTCTTC | 2 cut(s) | 1583, 2172 |
| PctI | GAATGC | 3 cut(s) | 1147, 1520, 1723 |
| PdiI | GCCGGC | 1 cut(s) | 431 |
| PdmI | GAANNNNTTC | 3 cut(s) | 563, 700, 1836 |
| PfeI | GAWTC | 4 cut(s) | 13, 745, 1603, 1930 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1158 |
| PinAI | ACCGGT | 1 cut(s) | 1233 |
| PleI | GAGTC | 5 cut(s) | 1075, 1414, 1627, 1893, 2480 |
| PpsI | GAGTC | 5 cut(s) | 1075, 1414, 1627, 1893, 2480 |
| Ppu21I | YACGTR | 1 cut(s) | 998 |
| PshBI | ATTAAT | 2 cut(s) | 384, 609 |
| PsiI | TTATAA | 1 cut(s) | 1349 |
| Psp1406I | AACGTT | 1 cut(s) | 1284 |
| Psp6I | CCWGG | 1 cut(s) | 1319 |
| PspEI | GGTNACC | 1 cut(s) | 1193 |
| PspGI | CCWGG | 1 cut(s) | 1319 |
| PspN4I | GGNNCC | 6 cut(s) | 418, 912, 1032, 1279, 2420, 2432 |
| PspPI | GGNCC | 2 cut(s) | 1031, 1289 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 400, 432 |
| PstI | CTGCAG | 1 cut(s) | 307 |
| PstNI | CAGNNNCTG | 1 cut(s) | 34 |
| PsuI | RGATCY | 2 cut(s) | 1302, 1489 |
| PvuII | CAGCTG | 3 cut(s) | 31, 245, 2030 |
| RigI | GGCCGGCC | 1 cut(s) | 433 |
| RsaI | GTAC | 2 cut(s) | 403, 1481 |
| RsaNI | GTAC | 2 cut(s) | 402, 1480 |
| RseI | CAYNNNNRTG | 2 cut(s) | 317, 717 |
| SacII | CCGCGG | 1 cut(s) | 909 |
| SapI | GCTCTTC | 2 cut(s) | 1583, 2172 |
| SaqAI | TTAA | 5 cut(s) | 384, 486, 609, 1566, 2304 |
| Sau3AI | GATC | 7 cut(s) | 451, 739, 755, 812, 1302, 1489, 2326 |
| Sau96I | GGNCC | 2 cut(s) | 1031, 1289 |
| SchI | GAGTC | 5 cut(s) | 1076, 1414, 1628, 1894, 2480 |
| ScrFI | CCNGG | 1 cut(s) | 1321 |
| SduI | GDGCHC | 3 cut(s) | 1392, 2278, 2477 |
| SfaNI | GCATC | 5 cut(s) | 625, 1306, 1498, 1634, 2004 |
| SfcI | CTRYAG | 2 cut(s) | 303, 2034 |
| Sfr303I | CCGCGG | 1 cut(s) | 909 |
| SfuI | TTCGAA | 2 cut(s) | 1657, 1768 |
| SgrBI | CCGCGG | 1 cut(s) | 909 |
| SinI | GGWCC | 1 cut(s) | 1289 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 317, 717 |
| SmlI | CTYRAG | 6 cut(s) | 767, 1475, 1613, 1697, 1882, 1918 |
| SmoI | CTYRAG | 6 cut(s) | 767, 1475, 1613, 1697, 1882, 1918 |
| SpeI | ACTAGT | 1 cut(s) | 404 |
| SsiI | CCGC | 9 cut(s) | 370, 854, 860, 906, 908, 965, 968, 1551, 2400 |
| SspI | AATATT | 2 cut(s) | 112, 2243 |
| SspMI | CTAG | 8 cut(s) | 140, 405, 1313, 1437, 1640, 1685, 2315, 2469 |
| StyD4I | CCNGG | 1 cut(s) | 1319 |
| StyI | CCWWGG | 3 cut(s) | 421, 1152, 2414 |
| TaaI | ACNGT | 8 cut(s) | 77, 354, 1023, 1671, 1857, 2188, 2374, 2483 |
| TaiI | ACGT | 3 cut(s) | 1000, 1287, 1785 |
| TaqI | TCGA | 7 cut(s) | 278, 811, 1561, 1657, 1768, 2340, 2350 |
| TaqII | GACCGA | 1 cut(s) | 1830 |
| TatI | WGTACW | 1 cut(s) | 1479 |
| TauI | GCSGC | 2 cut(s) | 911, 970 |
| TfiI | GAWTC | 4 cut(s) | 13, 745, 1603, 1930 |
| Tru1I | TTAA | 5 cut(s) | 384, 486, 609, 1566, 2304 |
| Tru9I | TTAA | 5 cut(s) | 384, 486, 609, 1566, 2304 |
| TscAI | CASTG | 7 cut(s) | 240, 297, 403, 1116, 1798, 2005, 2488 |
| TseFI | GTSAC | 3 cut(s) | 1193, 2374, 2483 |
| Tsp45I | GTSAC | 3 cut(s) | 1193, 2374, 2483 |
| TspRI | CASTG | 7 cut(s) | 240, 297, 403, 1116, 1798, 2005, 2488 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1158 |
| VpaK11BI | GGWCC | 1 cut(s) | 1289 |
| VspI | ATTAAT | 2 cut(s) | 384, 609 |
| XapI | RAATTY | 4 cut(s) | 481, 2343, 2449, 2464 |
| XceI | RCATGY | 2 cut(s) | 2064, 2337 |
| XmiI | GTMKAC | 1 cut(s) | 1025 |
| XmnI | GAANNNNTTC | 3 cut(s) | 563, 700, 1836 |
| XspI | CTAG | 8 cut(s) | 140, 405, 1313, 1437, 1640, 1685, 2315, 2469 |