MD14G1188500.v1.1

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
28018369 .. 28020910
2542 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1188500.v1.1.491

Sequence Viewer

Length: 2148 bp
ATGCCACAGTCCAAAGGAACAATACTTGCCGAGACTATTGCAGCAACAGCTGTAGCCACTCTAGTTATTGCCGGAATCTTGTTCTTCGTCTACGGACTCCTCGCTGCTCGCCGCAACACAAAAGGCAAGGAAAATGGGAGTTTTCGCCGCGAAGATGTTGCGATGAATCGTGAGGAGTTTAGGCAATGTGGTGGGAATGTGAAGGGGTTAATTGTTGATGAGAATGGTGTGGATGTTATATACTTGAAGAAATTAGAAGCTGGACAGGCTCATACAAATTTTCCAAAGATTATGTTTAACCCTAGTTTTGAAGATGATGATGATGAAGAACAAGAAAAAAAGGTGGATTCTAAGCCGTCTGACTTAATCAATCATGATCAATTGGTAAAAAAACCATTTTCTCTACATCCTCCAAGACCTCTACTTAGAAAAATTTCACCAAAAGTGTTGGAAAAGCATGCTCTAGAATCACTGCCTCCACCAACACCCCAACCGGCAAACGGTAAATCTGCACCGCCGCTACCGCCTCCGCCTCGACCTCCTCCTCCTCCACCGCCATCGCCACCTGTTATGGTAAAAAAGAATCCTCTACCGCCTCCGCCGCCTCCTAAGGCAGGTGGTTTGGGTTTGTCACTAAAACCGCCGCCTGCACCTAAGGGCAGAGCAAGCTACAAGAGCAGGGCAGAGACCTCAACAGGGGAGGAGGGTTTAAAAGCAACCGGTGGCGGGCAAACGAAGCTGAAGCCGCTGCACTGGGATAAGGTTATGGCTGCCGCTGATCATTCAATGGTTTGGGATCAAATCAATGATGGATCATTCAGATTTGATGATGAGCTTATGGAAAATCTCTTTGGTTATTCCAAAATTAAAAACCAATCCTCTGAGAGAAACAACCACATGCCTTCAGCTTCAAGCAAACCTAACTCTGCCCCAACATCTCAAGTTTTCATCTTAGATCCTCGAAAGTCTCAGAACACCGCAATCGTGCTAAGATCTCTCGCAATCTCTCAAAAAGAAATCGTTACTGCCTTGCTTGATGGACAAGGACTTGGTGCTGATACACTAGAAAAGCTCACCAAAATTTCTCCAACCAAAGAGGAAGGAGCAAAAATCCTCCAATTCAATGGAAACCCTAGTACACTAGCAATTGGTGAATCTTTCCTCTACCACATTTTGAAGGCTGTTCCTACGGCATTCACGCGTTTCAATGCGATGCTCTTCAGAGCAAACTACGATCTTGAAGTCCTTCACCTCAAGGAATCCTTGCAAACACTTGAACTTGGGTGCAAGGAGCTAAGAACTCGCGGGCTCTTCCTAAGGCTTCTCGAGGCAATTCTCAAAGCCGGCAATAGAATGAATGCTGGAACTGCAAGAGGCAATGCACAAGGCTTCAACCTAAGTGCTCTTCTAAAGCTATCCGATATCAAAAGTACTGATGGAAAGACTACTCTACTTCACTTTGTGGTTGAACAAGTAGCTCAATCCGAGGGGAGAGGTTTCGTGATAAATCAAAACCGCAGCTTTGGAAGAAACACTAGTCAAAGAAGCGAAACTAGTACACTGAATTCGGATAATCTAACCGCTGAAGAGCGAAGAAAAGAGTACTTAATCCAAGGGTTGTCAAAGCTAGAAGGATTGAGCACTGAACTATCCAATGTGAAGAAAGCAGCAACCATAGAGTATGACAGCTTCATCCACATGTGCTCTGCTCTAAGCAACCGTGTCAGCGAAATCAAGAAGCTTTTGGCTGAGAGTGGCAATGCTGAGAGAGGAGGGTTTGCAAGAGAAATGAAGGGGTTTTTGGAGGAATGTGAGGCGGAGCTCACGGTGGTGAGAGAAGAGCAAACTAGGGTTATGGAGCTTGTGAGGAAAACAACCGAGTACTACCAAGCAGGAGCTTCGAGAGACAAAGGAGCTGCACCATTTCAGCTGTTTGTTATTGTGAAAGATTTTCTAGACATGGTTACTCTTGTTTGTGCAGAAATTTCAAGTAAACTACAGAAGAAGAGTTCTACGAAAGCGGTAGGATCATCGTCACCGCCACTGTCACCTTCAAGCATAACATCAAAGAGGTTGATGAACTTTCACTCACATTTTGTTTCAGATGTGTCATGGACATCTTCCAGTGAATCAGAAGATGAATTCTGA

Protein Analysis

716

Amino Acids

78.43

Weight (kDa)

9.02

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FH2 PF02181 244 - 655 3.5e-100 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 605
Acc36I ACCTGC 1 cut(s) 605
AccI GTMKAC 1 cut(s) 90
AccII CGCG 3 cut(s) 150, 1201, 1305
AclWI GGATC 4 cut(s) 804, 820, 950, 2035
AcsI RAATTY 6 cut(s) 277, 432, 1080, 1564, 1983, 2141
AcuI CTGAAG 4 cut(s) 761, 888, 1204, 1605
AdeI CACNNNGTG 1 cut(s) 1462
AfaI GTAC 5 cut(s) 1138, 1432, 1558, 1604, 1883
AfiI CCNNNNNNNGG 4 cut(s) 500, 614, 696, 726
AflIII ACRYGT 2 cut(s) 1199, 1698
AgeI ACCGGT 1 cut(s) 719
AhlI ACTAGT 2 cut(s) 1535, 1553
AjuI GAANNNNNNNTTGG 4 cut(s) 834, 866, 1784, 1816
AleI CACNNNNGTG 1 cut(s) 1829
Alw21I GWGCWC 4 cut(s) 1405, 1643, 1706, 1824
Alw26I GTCTC 4 cut(s) 26, 680, 972, 1899
AlwI GGATC 4 cut(s) 804, 820, 950, 2035
Ama87I CYCGRG 1 cut(s) 1325
ApeKI GCWGC 7 cut(s) 41, 104, 748, 770, 1518, 1667, 1916
ApoI RAATTY 6 cut(s) 277, 432, 1080, 1564, 1983, 2141
AsiGI ACCGGT 1 cut(s) 719
Asp700I GAANNNNTTC 2 cut(s) 433, 1245
AsuHPI GGTGA 7 cut(s) 429, 1066, 1163, 1241, 1843, 2028, 2040
AvaI CYCGRG 1 cut(s) 1325
AxyI CCTNAGG 3 cut(s) 609, 654, 1316
BanII GRGCYC 2 cut(s) 1311, 1824
BarI GAAGNNNNNNTAC 2 cut(s) 1673, 1705
Bbv12I GWGCWC 4 cut(s) 1405, 1643, 1706, 1824
BbvI GCAGC 7 cut(s) 53, 91, 735, 757, 1530, 1679, 1903
BccI CCATC 4 cut(s) 565, 803, 1031, 1430
BceAI ACGGC 2 cut(s) 340, 1206
BcgI CGANNNNNNTGC 6 cut(s) 20, 54, 140, 174, 1881, 1915
BclI TGATCA 2 cut(s) 376, 778
BcoDI GTCTC 4 cut(s) 26, 680, 972, 1899
BcuI ACTAGT 2 cut(s) 1535, 1553
BfmI CTRYAG 2 cut(s) 51, 1997
BfuAI ACCTGC 1 cut(s) 605
BglII AGATCT 1 cut(s) 992
BmcAI AGTACT 3 cut(s) 1432, 1604, 1883
BmeT110I CYCGRG 1 cut(s) 1325
BmrI ACTGGG 1 cut(s) 763
BmsI GCATC 1 cut(s) 1203
BmuI ACTGGG 1 cut(s) 763
BpuEI CTTGAG 2 cut(s) 924, 1238
BsaI GGTCTC 1 cut(s) 680
BsaJI CCNNGG 2 cut(s) 1485, 1612
BsaWI WCCGGW 1 cut(s) 719
Bsc4I CCNNNNNNNGG 4 cut(s) 500, 614, 696, 726
Bse118I RCCGGY 3 cut(s) 493, 719, 1343
Bse1I ACTGG 2 cut(s) 758, 2124
Bse21I CCTNAGG 3 cut(s) 609, 654, 1316
Bse3DI GCAATG 3 cut(s) 191, 1384, 1765
BseDI CCNNGG 2 cut(s) 1485, 1612
BseGI GGATG 3 cut(s) 238, 406, 1692
BseLI CCNNNNNNNGG 4 cut(s) 500, 614, 696, 726
BseMI GCAATG 3 cut(s) 191, 1384, 1765
BseMII CTCAG 4 cut(s) 873, 983, 1740, 1755
BseNI ACTGG 2 cut(s) 758, 2124
BseRI GAGGAG 7 cut(s) 89, 188, 531, 534, 537, 716, 1785
BseXI GCAGC 7 cut(s) 53, 91, 735, 757, 1530, 1679, 1903
BsgI GTGCAG 5 cut(s) 495, 633, 734, 1902, 1998
Bsh1236I CGCG 3 cut(s) 150, 1201, 1305
BshTI ACCGGT 1 cut(s) 719
BsiHKAI GWGCWC 4 cut(s) 1405, 1643, 1706, 1824
BsiHKCI CYCGRG 1 cut(s) 1325
BsiSI CCGG 4 cut(s) 72, 494, 720, 1344
BslI CCNNNNNNNGG 4 cut(s) 500, 614, 696, 726
BsmAI GTCTC 4 cut(s) 26, 680, 972, 1899
BsmI GAATGC 2 cut(s) 1193, 1363
Bso31I GGTCTC 1 cut(s) 680
BsoBI CYCGRG 1 cut(s) 1325
Bsp1286I GDGCHC 5 cut(s) 1311, 1405, 1643, 1706, 1824
Bsp143I GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
BspCNI CTCAG 4 cut(s) 874, 982, 1741, 1756
BspFNI CGCG 3 cut(s) 150, 1201, 1305
BspHI TCATGA 1 cut(s) 373
BspMI ACCTGC 1 cut(s) 605
BspPI GGATC 4 cut(s) 804, 820, 950, 2035
BspQI GCTCTTC 5 cut(s) 1223, 1316, 1410, 1581, 1833
BspTNI GGTCTC 1 cut(s) 680
BsrDI GCAATG 3 cut(s) 191, 1384, 1765
BsrFI RCCGGY 3 cut(s) 493, 719, 1343
BsrI ACTGG 2 cut(s) 758, 2124
BssAI RCCGGY 3 cut(s) 493, 719, 1343
BssECI CCNNGG 2 cut(s) 1485, 1612
BssMI GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
BssT1I CCWWGG 1 cut(s) 1612
Bst4CI ACNGT 5 cut(s) 9, 503, 1721, 1828, 2046
Bst6I CTCTTC 6 cut(s) 1223, 1316, 1410, 1581, 1833, 2000
BstC8I GCNNGC 7 cut(s) 109, 459, 648, 667, 728, 1307, 1345
BstENI CCTNNNNNAGG 1 cut(s) 612
BstF5I GGATG 3 cut(s) 238, 406, 1692
BstFNI CGCG 3 cut(s) 150, 1201, 1305
BstKTI GATC 8 cut(s) 379, 781, 799, 815, 958, 995, 1237, 2030
BstMAI GTCTC 4 cut(s) 26, 680, 972, 1899
BstMBI GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
BstMWI GCNNNNNNNGC 9 cut(s) 47, 266, 523, 601, 666, 675, 736, 745, 1367
BstNSI RCATGY 3 cut(s) 461, 901, 1702
BstSFI CTRYAG 2 cut(s) 51, 1997
BstUI CGCG 3 cut(s) 150, 1201, 1305
BstV1I GCAGC 7 cut(s) 53, 91, 735, 757, 1530, 1679, 1903
BstX2I RGATCY 2 cut(s) 955, 992
BstXI CCANNNNNNTGG 1 cut(s) 1124
BstYI RGATCY 2 cut(s) 955, 992
Bsu36I CCTNAGG 3 cut(s) 609, 654, 1316
BtgZI GCGATG 3 cut(s) 176, 543, 1226
BtsCI GGATG 3 cut(s) 238, 406, 1692
BtsI GCAGTG 1 cut(s) 470
BtsIMutI CAGTG 6 cut(s) 470, 751, 1559, 1641, 2042, 2131
BveI ACCTGC 1 cut(s) 605
Cac8I GCNNGC 7 cut(s) 109, 459, 648, 667, 728, 1307, 1345
CciI TCATGA 1 cut(s) 373
Cfr10I RCCGGY 3 cut(s) 493, 719, 1343
Csp6I GTAC 5 cut(s) 1137, 1431, 1557, 1603, 1882
CspAI ACCGGT 1 cut(s) 719
CviAII CATG 6 cut(s) 374, 458, 898, 1699, 1960, 2112
CviQI GTAC 5 cut(s) 1137, 1431, 1557, 1603, 1882
DpnI GATC 8 cut(s) 378, 780, 798, 814, 957, 994, 1236, 2029
DpnII GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
DraI TTTAAA 1 cut(s) 711
DraIII CACNNNGTG 1 cut(s) 1462
Eam1104I CTCTTC 6 cut(s) 1223, 1316, 1410, 1581, 1833, 2000
EarI CTCTTC 6 cut(s) 1223, 1316, 1410, 1581, 1833, 2000
EciI GGCGGA 3 cut(s) 519, 588, 1832
Ecl136II GAGCTC 1 cut(s) 1822
Eco130I CCWWGG 1 cut(s) 1612
Eco24I GRGCYC 2 cut(s) 1311, 1824
Eco31I GGTCTC 1 cut(s) 680
Eco32I GATATC 1 cut(s) 1423
Eco53kI GAGCTC 1 cut(s) 1822
Eco57I CTGAAG 4 cut(s) 761, 888, 1204, 1605
Eco81I CCTNAGG 3 cut(s) 609, 654, 1316
Eco88I CYCGRG 1 cut(s) 1325
EcoICRI GAGCTC 1 cut(s) 1822
EcoNI CCTNNNNNAGG 1 cut(s) 612
EcoRI GAATTC 2 cut(s) 1564, 2141
EcoRV GATATC 1 cut(s) 1423
EcoT14I CCWWGG 1 cut(s) 1612
EcoT38I GRGCYC 2 cut(s) 1311, 1824
ErhI CCWWGG 1 cut(s) 1612
FaeI CATG 6 cut(s) 377, 461, 901, 1702, 1963, 2115
FalI AAGNNNNNCTT 2 cut(s) 1247, 1279
FatI CATG 6 cut(s) 373, 457, 897, 1698, 1959, 2111
FauI CCCGC 2 cut(s) 719, 1298
FbaI TGATCA 2 cut(s) 376, 778
FblI GTMKAC 1 cut(s) 90
FokI GGATG 3 cut(s) 245, 393, 1679
FriOI GRGCYC 2 cut(s) 1311, 1824
HapII CCGG 4 cut(s) 72, 494, 720, 1344
Hin1II CATG 6 cut(s) 377, 461, 901, 1702, 1963, 2115
HindIII AAGCTT 1 cut(s) 1739
HinfI GANTC 9 cut(s) 75, 96, 166, 347, 467, 583, 1154, 1259, 2129
HpaII CCGG 4 cut(s) 72, 494, 720, 1344
HphI GGTGA 7 cut(s) 429, 1066, 1163, 1241, 1843, 2028, 2040
Hpy166II GTNNAC 4 cut(s) 91, 1139, 1559, 1994
Hpy188III TCNNGA 9 cut(s) 170, 374, 464, 1238, 1325, 1501, 1735, 1902, 1955
Hpy8I GTNNAC 4 cut(s) 91, 1139, 1559, 1994
HpyAV CCTTC 8 cut(s) 196, 912, 1094, 1171, 1256, 1625, 1786, 2061
HpyCH4III ACNGT 5 cut(s) 9, 503, 1721, 1828, 2046
HpyF10VI GCNNNNNNNGC 9 cut(s) 47, 266, 523, 601, 666, 675, 736, 745, 1367
Hsp92II CATG 6 cut(s) 377, 461, 901, 1702, 1963, 2115
KroI GCCGGC 1 cut(s) 1343
KroNI GCCGGC 1 cut(s) 1345
Ksp22I TGATCA 2 cut(s) 376, 778
Kzo9I GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
LguI GCTCTTC 5 cut(s) 1223, 1316, 1410, 1581, 1833
LmnI GCTCC 6 cut(s) 1103, 1291, 1819, 1858, 1895, 1913
Lsp1109I GCAGC 7 cut(s) 53, 91, 735, 757, 1530, 1679, 1903
LweI GCATC 1 cut(s) 1203
MaeIII GTNAC 5 cut(s) 630, 1021, 1963, 2034, 2046
MalI GATC 8 cut(s) 378, 780, 798, 814, 957, 994, 1236, 2029
MboI GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
MfeI CAATTG 2 cut(s) 380, 1146
MflI RGATCY 2 cut(s) 955, 992
MhlI GDGCHC 5 cut(s) 1311, 1405, 1643, 1706, 1824
MluI ACGCGT 1 cut(s) 1199
MlyI GAGTC 1 cut(s) 90
MmeI TCCRAC 2 cut(s) 429, 1112
MroNI GCCGGC 1 cut(s) 1343
MroXI GAANNNNTTC 2 cut(s) 433, 1245
MseI TTAA 6 cut(s) 209, 297, 365, 710, 867, 1607
MslI CAYNNNNRTG 2 cut(s) 1697, 1829
MspA1I CMGCKG 5 cut(s) 50, 748, 776, 1583, 1930
MspI CCGG 4 cut(s) 72, 494, 720, 1344
MunI CAATTG 2 cut(s) 380, 1146
Mva1269I GAATGC 2 cut(s) 1193, 1363
MvnI CGCG 3 cut(s) 150, 1201, 1305
MwoI GCNNNNNNNGC 9 cut(s) 47, 266, 523, 601, 666, 675, 736, 745, 1367
NaeI GCCGGC 1 cut(s) 1345
NdeII GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
NgoMIV GCCGGC 1 cut(s) 1343
NlaIII CATG 6 cut(s) 377, 461, 901, 1702, 1963, 2115
NmeAIII GCCGAG 1 cut(s) 55
NmuCI GTSAC 3 cut(s) 630, 2034, 2046
NspI RCATGY 3 cut(s) 461, 901, 1702
OliI CACNNNNGTG 1 cut(s) 1829
PaeI GCATGC 1 cut(s) 461
PaeR7I CTCGAG 1 cut(s) 1325
PagI TCATGA 1 cut(s) 373
PaqCI CACCTGC 1 cut(s) 605
PciI ACATGT 1 cut(s) 1698
PciSI GCTCTTC 5 cut(s) 1223, 1316, 1410, 1581, 1833
PctI GAATGC 2 cut(s) 1193, 1363
PdiI GCCGGC 1 cut(s) 1345
PdmI GAANNNNTTC 2 cut(s) 433, 1245
PfeI GAWTC 8 cut(s) 75, 166, 347, 467, 583, 1154, 1259, 2129
PinAI ACCGGT 1 cut(s) 719
PleI GAGTC 1 cut(s) 90
PpsI GAGTC 1 cut(s) 90
PscI ACATGT 1 cut(s) 1698
Psp124BI GAGCTC 1 cut(s) 1824
PsuI RGATCY 2 cut(s) 955, 992
PvuII CAGCTG 2 cut(s) 50, 1930
RsaI GTAC 5 cut(s) 1138, 1432, 1558, 1604, 1883
RsaNI GTAC 5 cut(s) 1137, 1431, 1557, 1603, 1882
RseI CAYNNNNRTG 2 cut(s) 1697, 1829
SacI GAGCTC 1 cut(s) 1824
SapI GCTCTTC 5 cut(s) 1223, 1316, 1410, 1581, 1833
SaqAI TTAA 6 cut(s) 209, 297, 365, 710, 867, 1607
Sau3AI GATC 8 cut(s) 376, 778, 796, 812, 955, 992, 1234, 2027
ScaI AGTACT 3 cut(s) 1432, 1604, 1883
SchI GAGTC 1 cut(s) 90
SduI GDGCHC 5 cut(s) 1311, 1405, 1643, 1706, 1824
SfaNI GCATC 1 cut(s) 1203
SfcI CTRYAG 2 cut(s) 51, 1997
Sfr274I CTCGAG 1 cut(s) 1325
SlaI CTCGAG 1 cut(s) 1325
SmiMI CAYNNNNRTG 2 cut(s) 1697, 1829
SmlI CTYRAG 3 cut(s) 939, 1253, 1325
SmoI CTYRAG 3 cut(s) 939, 1253, 1325
SpeI ACTAGT 2 cut(s) 1535, 1553
SphI GCATGC 1 cut(s) 461
SstI GAGCTC 1 cut(s) 1824
StyI CCWWGG 1 cut(s) 1612
TaaI ACNGT 5 cut(s) 9, 503, 1721, 1828, 2046
TaqI TCGA 4 cut(s) 535, 961, 1326, 1901
TatI WGTACW 5 cut(s) 1136, 1430, 1556, 1602, 1881
TauI GCSGC 7 cut(s) 114, 150, 520, 604, 646, 748, 776
TfiI GAWTC 8 cut(s) 75, 166, 347, 467, 583, 1154, 1259, 2129
Tru1I TTAA 6 cut(s) 209, 297, 365, 710, 867, 1607
Tru9I TTAA 6 cut(s) 209, 297, 365, 710, 867, 1607
TscAI CASTG 6 cut(s) 477, 758, 1566, 1648, 2049, 2131
TseFI GTSAC 3 cut(s) 630, 2034, 2046
TseI GCWGC 7 cut(s) 41, 104, 748, 770, 1518, 1667, 1916
Tsp45I GTSAC 3 cut(s) 630, 2034, 2046
TspDTI ATGAA 7 cut(s) 179, 339, 937, 1370, 1681, 1805, 2093
TspGWI ACGGA 1 cut(s) 108
TspRI CASTG 6 cut(s) 477, 758, 1566, 1648, 2049, 2131
XagI CCTNNNNNAGG 1 cut(s) 612
XapI RAATTY 6 cut(s) 277, 432, 1080, 1564, 1983, 2141
XbaI TCTAGA 2 cut(s) 463, 1954
XceI RCATGY 3 cut(s) 461, 901, 1702
XhoI CTCGAG 1 cut(s) 1325
XmiI GTMKAC 1 cut(s) 90
XmnI GAANNNNTTC 2 cut(s) 433, 1245
ZrmI AGTACT 3 cut(s) 1432, 1604, 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.