Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003211

Physical Location & Seq

Genomic Coordinates Forward (+)

2002526 .. 2005165

Gene Structure 2640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16035

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGACAACCTCAAATGGAATAATGCTGGCCAAGATCATTGCAGCCACGGCTGCAACTACTCTTGTTATTGCCGGAATCTTCTTCTTCGTCTACAGATTTCTAGCTGCTCGGCGCCACCCAAAAGACAAGAGCAATGGAAGCTTTCGTAGGGAGGAAGTTAGAAGTGAAGATCAGCTCAGGCAATGCAGTGGAAATGTGAAGGGGTTGATTGTCGATGAGAATGGTGTGGATGTTATCTACTTGAGGAAACTAGAAGTTGGGCAGGTTCAAACTCATTTTCCCAAGGTAGTTTTCAACCCAAGTTATGAAGACGATGTAGAAGAAGAAGAAAAGAGAGTGGATGCTACAGGAGAGAGAGCCAAAATGCCCAAGCCTAAAGCGGTTCGTTCTTTTCATAAGCCATCTGATTTGATCAATCATGGAAAATTAGCAAAACCATTCATACAAAATCCAACTCCAGAAGTTGTGCTTTCATTGCCAAAGCTGCAACAGCGGCTTCCTCTAAAATCTCCTGCACCTCCATTTAGGATAACACCACCAAAGATGTTGGAAAAGCAAGCACTAGAATCACTTCCTCCTCTACCACCCCCACCATCAAGTAATATATCTCCACCACCATCAGTTCCTCCACCTCCTCCTCCTCCTCCTCCGCCACCACCCCCTCCACCACCACCACCCCCGCCCCCACAGCTGCCTAAGATAGTAAGAAGAAAATCTATACCACCCACTCAACCTAGGCTAGGTGGTTCTTTTTTAGCGCCAAAACCACCACCTACACCTAAAGGCATACCAAACAACAAAAGTAGGGCTGAGGCCTCAGCCGGGGAGAGCTCAAAAGTGAGTGTCATTAGGCAAACGAAGCTGAAGCCATTGCACTGGGACAAGGTTATGACTGCTGTTGATCATTCCATGGTCTGGGATCAAATCACTGATGGAACATTCAGATTTGATGATGAGCTTATGGAAAACTTGTTTGGATATAACATCACCAAAAACCAAACCAATGAAAGAAATAACAATTTGTCAGCTTCAGCCAAGTCTAACTCTGCCCCAACAGCTCAAGTTTTCATTCTAGACCCCAGGAAGTCTCAAAACACAGCAATAGTGCTAAAGTCTCTCCCAATCTCTTGTAAAGAAATCATAAATTCTCTTCTTGATGGTCATGGCCTCGGTTCAGAAACACTCGAAAAACTCACCAAAATTTCTCCAACCAAAGAAGAAGAGATCAAGATCCTCCAATTCAATGGCAATCCAAATAAGCTTGCAGATGCTGAGTCTTTCCTCTACCACATCCTCAAAGCTGTCCCTTCAGCATTTACACGATTCAATGCAATGCTTTTCCGGGAAAATTATGACACCGAAATCCTCCACCTGAAGGAGTCAATACAAACACTTGAACTCGGGTGCAAGGAGCTAAGAGCTCCAGGTTTTTTCCTTAAACTTCTTGAAGCGATTCTCAAAGCTGGAAACCGAATGAATGCTGGAACTGCTCGAGGAAATGCACAAGGTTTCAACCTTAGTGCTCTTCCGAAGCTATCTGATGTCAAAAGCACTGATGCAAAGACTACTCTGCTTCACTTTGTGGTTGAACAAGTTGCTCAATTGGAGGGTAGAGACTTAGTGATCAATCAGAGAAGCCAAACTAGTACACCAAATTCGGATAATCTGACAGCCGAAGAGAGAAGAAAAGAGTACTTAATCCAAGGGTTACCAAAGTTGGGAGGCTTGAGTATTGAGCTATCTAATGTGAAGAAAGCAGCTACAATAGACTATGACAGCTTCATTTGTATGAGCTCCACTCTCACTAGCCGTGTAGATGAAATTAGAAAGGTTTTGACACATTGTTGCAATGGTGAGACAGGAGGGTTTGCAAGAGAAATGAAAGAGTTTTCGGAGGAATGTGAGGAGGAGCTTAAGGTTGTGAGAGAAGAGCTGATTAGGGTTATGGAACTTGTGAAGAGAACAACGGAGTATTACCAAGCCAGAGCTGCGAAAGACAAAGGAGCTCAACCACTTCAGCTCTTTGTGATTGTTAGAGGTTTTCTAGACATGGTTGATCTTGTTTGTGCAGAAATTTCAAGAAAGGTACAGAGGAAGAGTACTTCTACAACCAATGTGGGATCAGCATCACCTCCATTGTCGCCTACAGTCCTAACACCAAAGAAGTTACAGAACTTCCAGTCACATTTCAATTCACATGTGTCTTGGTCATCTTCCAGTGATTCAGAAGATGATTTCAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005522 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0016049 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0033043 GO:0040007 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0060560 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

748

Amino Acids

82.96

Weight (kDa)

9.19

Isoelectric Point (pI)

48.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	284 - 685	7e-100	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24150 AT1G59910 AT1G70140
fragaria_vesca	FvH4_4g35240 FvH4_5g16231
malus_domestica	MD06G1182500.v1.1 MD13G1085100.v1.1 MD14G1188500.v1.1 MD16G1084300.v1.1
prunus_persica	Prupe.1G261700_v2.0.a1 Prupe.5G180600_v2.0.a1
pyrus_communis	pycom06g16140 pycom13g07360
rosa_chinensis	RchiOBHm_Chr4g0444841 RchiOBHm_Chr7g0179861
rosa_laevigata	RLG00000005317 RLG00000005796
rosa_multiflora	Rmu_sc0000096.1_g000028 Rmu_sc0001754.1_g000001 Rmu_sc0006845.1_g000009 Rmu_sc0031375.1_g000001 Rmu_sc0034891.1_g000002 Rmu_sc0034892.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273390 Rroxscaffold_5G00385330
rosa_rugosa	Rorug04G0355500 Rorug06G0428800
rosa_samantha	Rh4AG417000 Rh4BG428800 Rh4CG443600 Rh4DG424800 Rh7AG028700 Rh7BG027900 Rh7CG029600 Rh7DG029000
rosa_wichuraiana	Rw4G035740 Rw7G002300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	253
AccB1I	GGYRCC	1 cut(s)	111
AccB7I	CCANNNNNTGG	1 cut(s)	915
AccI	GTMKAC	1 cut(s)	90
AciI	CCGC	4 cut(s)	380, 493, 650, 680
AclWI	GGATC	3 cut(s)	927, 1225, 2128
AcoI	YGGCCR	1 cut(s)	27
AcsI	RAATTY	4 cut(s)	1144, 1200, 1654, 2073
AcuI	CTGAAG	5 cut(s)	884, 1014, 1293, 1394, 2000
AcyI	GRCGYC	1 cut(s)	112
AdeI	CACNNNGTG	1 cut(s)	1582
AfaI	GTAC	4 cut(s)	1648, 1694, 2088, 2101
AfiI	CCNNNNNNNGG	5 cut(s)	740, 822, 915, 1375, 1718
AflII	CTTAAG	1 cut(s)	1913
AflIII	ACRYGT	1 cut(s)	2197
AhlI	ACTAGT	1 cut(s)	1643
AjnI	CCWGG	2 cut(s)	1079, 1423
AjuI	GAANNNNNNNTTGG	4 cut(s)	275, 307, 957, 989
Alw21I	GWGCWC	5 cut(s)	833, 1423, 1525, 1796, 2008
Alw26I	GTCTC	4 cut(s)	1092, 1119, 1608, 1850
AlwI	GGATC	3 cut(s)	927, 1225, 2128
AlwNI	CAGNNNCTG	1 cut(s)	1271
Ama87I	CYCGRG	2 cut(s)	1400, 1491
AoxI	GGCC	3 cut(s)	27, 813, 1165
ApeKI	GCWGC	7 cut(s)	41, 50, 104, 484, 691, 1757, 1988
ApoI	RAATTY	4 cut(s)	1144, 1200, 1654, 2073
Asp700I	GAANNNNTTC	2 cut(s)	570, 1452
AspA2I	CCTAGG	1 cut(s)	734
AspLEI	GCGC	2 cut(s)	114, 760
AsuC2I	CCSGG	2 cut(s)	823, 1343
AsuHPI	GGTGA	4 cut(s)	979, 1186, 1865, 2121
AvaI	CYCGRG	2 cut(s)	1400, 1491
AvrII	CCTAGG	1 cut(s)	734
BalI	TGGCCA	1 cut(s)	29
BanI	GGYRCC	1 cut(s)	111
BanII	GRGCYC	4 cut(s)	833, 1423, 1796, 2008
BbsI	GAAGAC	1 cut(s)	315
Bbv12I	GWGCWC	5 cut(s)	833, 1423, 1525, 1796, 2008
BbvCI	CCTCAGC	2 cut(s)	810, 817
BbvI	GCAGC	7 cut(s)	37, 53, 91, 471, 678, 1769, 1975
BccI	CCATC	5 cut(s)	409, 601, 625, 926, 1151
BceAI	ACGGC	2 cut(s)	63, 1794
BciT130I	CCWGG	2 cut(s)	1081, 1425
BclI	TGATCA	3 cut(s)	411, 901, 1623
BcnI	CCSGG	2 cut(s)	823, 1343
BcoDI	GTCTC	4 cut(s)	1092, 1119, 1608, 1850
BcuI	ACTAGT	1 cut(s)	1643
BfaI	CTAG	9 cut(s)	101, 251, 563, 735, 740, 1073, 1644, 1806, 2045
BfmI	CTRYAG	3 cut(s)	91, 345, 2145
BfoI	RGCGCY	2 cut(s)	115, 761
BfrI	CTTAAG	1 cut(s)	1913
BfuAI	ACCTGC	1 cut(s)	253
BisI	GCNGC	8 cut(s)	42, 51, 105, 485, 494, 692, 1758, 1989
BlnI	CCTAGG	1 cut(s)	734
BlsI	GCNGC	8 cut(s)	43, 52, 106, 486, 495, 693, 1759, 1990
BmcAI	AGTACT	2 cut(s)	1694, 2101
Bme1390I	CCNGG	4 cut(s)	823, 1081, 1343, 1425
BmeT110I	CYCGRG	2 cut(s)	1400, 1491
BmiI	GGNNCC	1 cut(s)	113
BmrFI	CCNGG	4 cut(s)	823, 1081, 1343, 1425
BmrI	ACTGGG	1 cut(s)	886
BmsI	GCATC	4 cut(s)	331, 1258, 1546, 2135
BmuI	ACTGGG	1 cut(s)	886
BpiI	GAAGAC	1 cut(s)	315
BplI	GAGNNNNNCTC	2 cut(s)	1783, 1815
BpmI	CTGGAG	2 cut(s)	441, 1407
Bpu10I	CCTNAGC	3 cut(s)	176, 810, 817
BpuEI	CTTGAG	3 cut(s)	262, 1044, 1747
BpuMI	CCSGG	2 cut(s)	823, 1343
BsaBI	GATNNNNATC	2 cut(s)	1229, 2125
BsaHI	GRCGYC	1 cut(s)	112
BsaJI	CCNNGG	8 cut(s)	45, 282, 734, 822, 909, 1079, 1168, 1702
Bsc4I	CCNNNNNNNGG	5 cut(s)	740, 822, 915, 1375, 1718
Bse1I	ACTGG	3 cut(s)	881, 2179, 2217
Bse3DI	GCAATG	7 cut(s)	36, 139, 188, 473, 869, 1338, 1855
Bse8I	GATNNNNATC	2 cut(s)	1229, 2125
BseBI	CCWGG	2 cut(s)	1081, 1425
BseDI	CCNNGG	8 cut(s)	45, 282, 734, 822, 909, 1079, 1168, 1702
BseGI	GGATG	3 cut(s)	235, 346, 1290
BseJI	GATNNNNATC	2 cut(s)	1229, 2125
BseLI	CCNNNNNNNGG	5 cut(s)	740, 822, 915, 1375, 1718
BseMI	GCAATG	7 cut(s)	36, 139, 188, 473, 869, 1338, 1855
BseMII	CTCAG	4 cut(s)	190, 801, 831, 1263
BseNI	ACTGG	3 cut(s)	881, 2179, 2217
BseRI	GAGGAG	8 cut(s)	567, 624, 627, 630, 633, 636, 1919, 1922
BseXI	GCAGC	7 cut(s)	37, 53, 91, 471, 678, 1769, 1975
BsgI	GTGCAG	2 cut(s)	498, 2088
BshFI	GGCC	3 cut(s)	29, 815, 1167
BshNI	GGYRCC	1 cut(s)	111
BsiHKAI	GWGCWC	5 cut(s)	833, 1423, 1525, 1796, 2008
BsiHKCI	CYCGRG	2 cut(s)	1400, 1491
BsiSI	CCGG	3 cut(s)	72, 822, 1342
BslFI	GGGAC	2 cut(s)	893, 1289
BslI	CCNNNNNNNGG	5 cut(s)	740, 822, 915, 1375, 1718
BsmAI	GTCTC	4 cut(s)	1092, 1119, 1608, 1850
BsmFI	GGGAC	2 cut(s)	893, 1289
BsmI	GAATGC	1 cut(s)	1483
BsnI	GGCC	3 cut(s)	29, 815, 1167
BsoBI	CYCGRG	2 cut(s)	1400, 1491
Bsp1286I	GDGCHC	5 cut(s)	833, 1423, 1525, 1796, 2008
Bsp19I	CCATGG	1 cut(s)	909
BspACI	CCGC	4 cut(s)	380, 493, 650, 680
BspANI	GGCC	3 cut(s)	29, 815, 1167
BspCNI	CTCAG	4 cut(s)	189, 802, 830, 1264
BspLI	GGNNCC	1 cut(s)	113
BspMI	ACCTGC	1 cut(s)	253
BspPI	GGATC	3 cut(s)	927, 1225, 2128
BspQI	GCTCTTC	2 cut(s)	1530, 1923
BspT107I	GGYRCC	1 cut(s)	111
BspTI	CTTAAG	1 cut(s)	1913
BsrDI	GCAATG	7 cut(s)	36, 139, 188, 473, 869, 1338, 1855
BsrI	ACTGG	3 cut(s)	881, 2179, 2217
BssECI	CCNNGG	8 cut(s)	45, 282, 734, 822, 909, 1079, 1168, 1702
BssNI	GRCGYC	1 cut(s)	112
BssT1I	CCWWGG	4 cut(s)	282, 734, 909, 1702
Bst2UI	CCWGG	2 cut(s)	1081, 1425
Bst4CI	ACNGT	1 cut(s)	2149
Bst6I	CTCTTC	7 cut(s)	1155, 1215, 1530, 1671, 1923, 1952, 2090
BstACI	GRCGYC	1 cut(s)	112
BstAFI	CTTAAG	1 cut(s)	1913
BstC8I	GCNNGC	3 cut(s)	27, 558, 1263
BstDEI	CTNAG	8 cut(s)	176, 696, 810, 817, 1272, 1415, 1517, 1618
BstDSI	CCRYGG	2 cut(s)	45, 909
BstEII	GGTNACC	1 cut(s)	1707
BstENI	CCTNNNNNAGG	1 cut(s)	738
BstF5I	GGATG	3 cut(s)	235, 346, 1290
BstH2I	RGCGCY	2 cut(s)	115, 761
BstHHI	GCGC	2 cut(s)	114, 760
BstMAI	GTCTC	4 cut(s)	1092, 1119, 1608, 1850
BstNI	CCWGG	2 cut(s)	1081, 1425
BstNSI	RCATGY	1 cut(s)	2201
BstPI	GGTNACC	1 cut(s)	1707
BstSCI	CCNGG	4 cut(s)	821, 1079, 1341, 1423
BstSFI	CTRYAG	3 cut(s)	91, 345, 2145
BstV1I	GCAGC	7 cut(s)	37, 53, 91, 471, 678, 1769, 1975
BstV2I	GAAGAC	1 cut(s)	315
BstX2I	RGATCY	1 cut(s)	1230
BstXI	CCANNNNNNTGG	2 cut(s)	876, 1244
BstYI	RGATCY	1 cut(s)	1230
BsuRI	GGCC	3 cut(s)	29, 815, 1167
BtgI	CCRYGG	2 cut(s)	45, 909
BtsCI	GGATG	3 cut(s)	235, 346, 1290
BtsI	GCAGTG	1 cut(s)	193
BtsIMutI	CAGTG	5 cut(s)	193, 874, 927, 1551, 2224
BveI	ACCTGC	1 cut(s)	253
Cac8I	GCNNGC	3 cut(s)	27, 558, 1263
CaiI	CAGNNNCTG	1 cut(s)	1271
CfoI	GCGC	2 cut(s)	114, 760
Csp6I	GTAC	4 cut(s)	1647, 1693, 2087, 2100
CspCI	CAANNNNNGTGG	2 cut(s)	2097, 2132
CviAII	CATG	5 cut(s)	419, 910, 1163, 2050, 2198
CviQI	GTAC	4 cut(s)	1647, 1693, 2087, 2100
DdeI	CTNAG	8 cut(s)	176, 696, 810, 817, 1272, 1415, 1517, 1618
DinI	GGCGCC	1 cut(s)	113
DraIII	CACNNNGTG	1 cut(s)	1582
EaeI	YGGCCR	1 cut(s)	27
Eam1104I	CTCTTC	7 cut(s)	1155, 1215, 1530, 1671, 1923, 1952, 2090
EarI	CTCTTC	7 cut(s)	1155, 1215, 1530, 1671, 1923, 1952, 2090
EciI	GGCGGA	1 cut(s)	639
Ecl136II	GAGCTC	4 cut(s)	831, 1421, 1794, 2006
Eco130I	CCWWGG	4 cut(s)	282, 734, 909, 1702
Eco147I	AGGCCT	1 cut(s)	815
Eco24I	GRGCYC	4 cut(s)	833, 1423, 1796, 2008
Eco53kI	GAGCTC	4 cut(s)	831, 1421, 1794, 2006
Eco57I	CTGAAG	5 cut(s)	884, 1014, 1293, 1394, 2000
Eco88I	CYCGRG	2 cut(s)	1400, 1491
Eco91I	GGTNACC	1 cut(s)	1707
EcoICRI	GAGCTC	4 cut(s)	831, 1421, 1794, 2006
EcoNI	CCTNNNNNAGG	1 cut(s)	738
EcoO65I	GGTNACC	1 cut(s)	1707
EcoRII	CCWGG	2 cut(s)	1079, 1423
EcoT14I	CCWWGG	4 cut(s)	282, 734, 909, 1702
EcoT38I	GRGCYC	4 cut(s)	833, 1423, 1796, 2008
EgeI	GGCGCC	1 cut(s)	113
EheI	GGCGCC	1 cut(s)	113
ErhI	CCWWGG	4 cut(s)	282, 734, 909, 1702
FaeI	CATG	5 cut(s)	422, 913, 1166, 2053, 2201
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	2 cut(s)	893, 1289
FatI	CATG	5 cut(s)	418, 909, 1162, 2049, 2197
FauI	CCCGC	1 cut(s)	687
FbaI	TGATCA	3 cut(s)	411, 901, 1623
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	8 cut(s)	42, 51, 105, 485, 494, 692, 1758, 1989
FokI	GGATG	3 cut(s)	242, 353, 1277
FriOI	GRGCYC	4 cut(s)	833, 1423, 1796, 2008
Fsp4HI	GCNGC	8 cut(s)	42, 51, 105, 485, 494, 692, 1758, 1989
FspBI	CTAG	9 cut(s)	101, 251, 563, 735, 740, 1073, 1644, 1806, 2045
GlaI	GCGC	2 cut(s)	113, 759
GluI	GCNGC	8 cut(s)	42, 51, 105, 485, 494, 692, 1758, 1989
GsuI	CTGGAG	2 cut(s)	441, 1407
HaeII	RGCGCY	2 cut(s)	115, 761
HaeIII	GGCC	3 cut(s)	29, 815, 1167
HapII	CCGG	3 cut(s)	72, 822, 1342
HhaI	GCGC	2 cut(s)	114, 760
Hin1I	GRCGYC	1 cut(s)	112
Hin1II	CATG	5 cut(s)	422, 913, 1166, 2053, 2201
Hin6I	GCGC	2 cut(s)	112, 758
HinP1I	GCGC	2 cut(s)	112, 758
HindIII	AAGCTT	2 cut(s)	139, 1259
HinfI	GANTC	7 cut(s)	75, 566, 1274, 1323, 1379, 1453, 2222
HpaII	CCGG	3 cut(s)	72, 822, 1342
HphI	GGTGA	4 cut(s)	979, 1186, 1865, 2121
Hpy166II	GTNNAC	2 cut(s)	91, 1649
Hpy188III	TCNNGA	7 cut(s)	458, 1073, 1154, 1228, 1445, 2045, 2079
Hpy8I	GTNNAC	2 cut(s)	91, 1649
HpyAV	CCTTC	3 cut(s)	193, 1317, 1369
HpyCH4III	ACNGT	1 cut(s)	2149
HpyF3I	CTNAG	8 cut(s)	176, 696, 810, 817, 1272, 1415, 1517, 1618
Hsp92I	GRCGYC	1 cut(s)	112
Hsp92II	CATG	5 cut(s)	422, 913, 1166, 2053, 2201
HspAI	GCGC	2 cut(s)	112, 758
KasI	GGCGCC	1 cut(s)	111
Ksp22I	TGATCA	3 cut(s)	411, 901, 1623
LguI	GCTCTTC	2 cut(s)	1530, 1923
LmnI	GCTCC	5 cut(s)	1411, 1426, 1799, 1909, 2003
Lsp1109I	GCAGC	7 cut(s)	37, 53, 91, 471, 678, 1769, 1975
LweI	GCATC	4 cut(s)	331, 1258, 1546, 2135
MaeI	CTAG	9 cut(s)	101, 251, 563, 735, 740, 1073, 1644, 1806, 2045
MaeIII	GTNAC	3 cut(s)	1707, 2166, 2181
MfeI	CAATTG	1 cut(s)	1601
MflI	RGATCY	1 cut(s)	1230
MhlI	GDGCHC	5 cut(s)	833, 1423, 1525, 1796, 2008
MlsI	TGGCCA	1 cut(s)	29
MluNI	TGGCCA	1 cut(s)	29
Mly113I	GGCGCC	1 cut(s)	112
MlyI	GAGTC	2 cut(s)	1283, 1388
MmeI	TCCRAC	3 cut(s)	476, 528, 1232
Mox20I	TGGCCA	1 cut(s)	29
MroXI	GAANNNNTTC	2 cut(s)	570, 1452
MscI	TGGCCA	1 cut(s)	29
MseI	TTAA	3 cut(s)	1437, 1697, 1914
MslI	CAYNNNNRTG	1 cut(s)	1787
Msp20I	TGGCCA	1 cut(s)	29
MspA1I	CMGCKG	2 cut(s)	493, 691
MspCI	CTTAAG	1 cut(s)	1913
MspI	CCGG	3 cut(s)	72, 822, 1342
MspR9I	CCNGG	4 cut(s)	823, 1081, 1343, 1425
MunI	CAATTG	1 cut(s)	1601
Mva1269I	GAATGC	1 cut(s)	1483
MvaI	CCWGG	2 cut(s)	1081, 1425
NarI	GGCGCC	1 cut(s)	112
NciI	CCSGG	2 cut(s)	823, 1343
NcoI	CCATGG	1 cut(s)	909
NlaIII	CATG	5 cut(s)	422, 913, 1166, 2053, 2201
NlaIV	GGNNCC	1 cut(s)	113
NmeAIII	GCCGAG	1 cut(s)	88
NmuCI	GTSAC	1 cut(s)	2181
NspI	RCATGY	1 cut(s)	2201
PaeR7I	CTCGAG	1 cut(s)	1491
PceI	AGGCCT	1 cut(s)	815
PciI	ACATGT	1 cut(s)	2197
PciSI	GCTCTTC	2 cut(s)	1530, 1923
PctI	GAATGC	1 cut(s)	1483
PdmI	GAANNNNTTC	2 cut(s)	570, 1452
PfeI	GAWTC	5 cut(s)	75, 566, 1323, 1453, 2222
PflMI	CCANNNNNTGG	1 cut(s)	915
PfoI	TCCNGGA	1 cut(s)	1341
PkrI	GCNGC	8 cut(s)	43, 52, 106, 486, 495, 693, 1759, 1990
PleI	GAGTC	2 cut(s)	1282, 1387
PluTI	GGCGCC	1 cut(s)	115
PpsI	GAGTC	2 cut(s)	1282, 1387
PscI	ACATGT	1 cut(s)	2197
Psp124BI	GAGCTC	4 cut(s)	833, 1423, 1796, 2008
Psp6I	CCWGG	2 cut(s)	1079, 1423
PspEI	GGTNACC	1 cut(s)	1707
PspGI	CCWGG	2 cut(s)	1079, 1423
PspN4I	GGNNCC	1 cut(s)	113
PspXI	VCTCGAGB	1 cut(s)	1491
PstNI	CAGNNNCTG	1 cut(s)	1271
PsuI	RGATCY	1 cut(s)	1230
PvuII	CAGCTG	1 cut(s)	691
RsaI	GTAC	4 cut(s)	1648, 1694, 2088, 2101
RsaNI	GTAC	4 cut(s)	1647, 1693, 2087, 2100
RseI	CAYNNNNRTG	1 cut(s)	1787
SacI	GAGCTC	4 cut(s)	833, 1423, 1796, 2008
SapI	GCTCTTC	2 cut(s)	1530, 1923
SaqAI	TTAA	3 cut(s)	1437, 1697, 1914
SatI	GCNGC	8 cut(s)	42, 51, 105, 485, 494, 692, 1758, 1989
ScaI	AGTACT	2 cut(s)	1694, 2101
SchI	GAGTC	2 cut(s)	1283, 1388
ScrFI	CCNGG	4 cut(s)	823, 1081, 1343, 1425
SduI	GDGCHC	5 cut(s)	833, 1423, 1525, 1796, 2008
SfaNI	GCATC	4 cut(s)	331, 1258, 1546, 2135
SfcI	CTRYAG	3 cut(s)	91, 345, 2145
SfoI	GGCGCC	1 cut(s)	113
Sfr274I	CTCGAG	1 cut(s)	1491
SlaI	CTCGAG	1 cut(s)	1491
SmiMI	CAYNNNNRTG	1 cut(s)	1787
SmlI	CTYRAG	5 cut(s)	241, 1059, 1491, 1726, 1913
SmoI	CTYRAG	5 cut(s)	241, 1059, 1491, 1726, 1913
SpeI	ACTAGT	1 cut(s)	1643
SseBI	AGGCCT	1 cut(s)	815
SsiI	CCGC	4 cut(s)	380, 493, 650, 680
SspDI	GGCGCC	1 cut(s)	111
SspMI	CTAG	9 cut(s)	101, 251, 563, 735, 740, 1073, 1644, 1806, 2045
SstI	GAGCTC	4 cut(s)	833, 1423, 1796, 2008
StuI	AGGCCT	1 cut(s)	815
StyD4I	CCNGG	4 cut(s)	821, 1079, 1341, 1423
StyI	CCWWGG	4 cut(s)	282, 734, 909, 1702
TaaI	ACNGT	1 cut(s)	2149
TaqI	TCGA	3 cut(s)	213, 1185, 1492
TatI	WGTACW	3 cut(s)	1646, 1692, 2099
TauI	GCSGC	1 cut(s)	496
TfiI	GAWTC	5 cut(s)	75, 566, 1323, 1453, 2222
Tru1I	TTAA	3 cut(s)	1437, 1697, 1914
Tru9I	TTAA	3 cut(s)	1437, 1697, 1914
TscAI	CASTG	5 cut(s)	193, 881, 934, 1558, 2224
TseFI	GTSAC	1 cut(s)	2181
TseI	GCWGC	7 cut(s)	41, 50, 104, 484, 691, 1757, 1988
Tsp45I	GTSAC	1 cut(s)	2181
TspGWI	ACGGA	1 cut(s)	1982
TspRI	CASTG	5 cut(s)	193, 881, 934, 1558, 2224
Van91I	CCANNNNNTGG	1 cut(s)	915
Vha464I	CTTAAG	1 cut(s)	1913
XagI	CCTNNNNNAGG	1 cut(s)	738
XapI	RAATTY	4 cut(s)	1144, 1200, 1654, 2073
XbaI	TCTAGA	2 cut(s)	1072, 2044
XceI	RCATGY	1 cut(s)	2201
XhoI	CTCGAG	1 cut(s)	1491
XmaJI	CCTAGG	1 cut(s)	734
XmiI	GTMKAC	1 cut(s)	90
XmnI	GAANNNNTTC	2 cut(s)	570, 1452
XspI	CTAG	9 cut(s)	101, 251, 563, 735, 740, 1073, 1644, 1806, 2045
ZrmI	AGTACT	2 cut(s)	1694, 2101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.