Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003211

Physical Location & Seq

Genomic Coordinates Reverse (-)

65167858 .. 65173807

Gene Structure 5950 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00273390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGACAACCTCAAATGGCATAATGCTGGCCAAGATCATTGCAGCCACGGCTGCAACTACTCTTGTTATTGCCGGAATCTTCTTCTTCGTCTACAGATTTCTAGCTGCTTGGAGCCACCCAAAAGACAAGAGCAATGGAAGCTTTCGTAGGGAGGAAGTTAGAATGAGTCATGAAGATCAGCTCAGGCAATGCAGTGGAAATGTGAAGGGGTTGATTGTCGATGAGAATGGTGTGGATGTTATCTACTTGAGGAAACTAGAAGTTGGCCAGGTTCAAACTCATTTTCCCAAGGTAGTTTTCAACCCAAGTTATGAAGACGATGTAGAAGAAGAAGAAAAGAGAGTGGATGCTAAAGGAGAAAGAGCCAAAATGCCCAAGCCTAAAGCGGTTCGTTCTTTTCATAAGCCATCTGATTTGATCAATCATGGAAAATTAGCAAAACCATTCGTGCAAAATCCAACTCCAGAAGTTATGCTTTCATTGCCAAAGCTGCAACAGCGGCTTCCTCTAAAATCTCCTGCACCTCCATTTAGGATAACACCACCAAAGATGTTGGAAAAGCAAGCACTAGAATCACTGCCTCCTCTACCACCCCCACCATCAAGTAATATATCTCCACCACTATCAGTTCCTCCACCACCACCCCCTCCACCACCGCCACCACCACCCCCGCCGCCACAGCTGCCTAAGATAGTAAGAAGAAAATCTCTACCACCCACTCCACCTAGCCTAGGTGGTTCTTTTTTAGCGCCAAAACCACCACCTACACCTAAAGGCATACCAAACAACAAAAGTAGGGCTGAGGCCTCAGCCGGGGAGAGCTCAAAAGTGAGTGTCATCGGGCAAACGAAGCTGAAGCCATTGCACTGGGACAAGGTTATGGCTGCTGTTGATCATTCAATGGTCTGGGATCAAATCACTGATGGATCATTCAGATTTGATGATGAGCTTATGGAAAACTTGTTTGGATATAACATCATCAAAAACCAAACCACTGAAAGAAATAACAATTTGTCAGCTTCAGCCAAGTCTAACTCTGCCCCAACAGCTCAAGTTTTCATTCTAGACCCCAGAAAGTCTCAAAACACAGCAATAGTGCTAAAGTCTCTCCCAATCTCTCGTAAAGAAATCGTAAATTCTCTTCTTGATGGTCAAGGACTCGGTTCAGAAACACTCGAAAAACTCACCAAAATTTCTCCAACCAAAGAAGAAGAGATCAAGATCCTCCAATTCAATGGCAATCCAAATAAGCTTGCAGATGCTGAGTCTTTCCTCTACCACATCCTCAAAGCTGTCCCTTCAGCATTTACACAATTCAATGCAATGCTTTTCCGGGAAAATTATGACACCGAAATCCTCCACCTCAAGGAGTCACTACAGACACTTGAACTCGGGTGCAAGGAGCTAAGAGCTCGAGGTTTTTTCCTTAAACTTCTTGAAGCGATTCTCAAAGCTGGAAACCGAATGAATGCTGGAACTGCTCGAGGAAATGCACAAGGTTTCAACCTTAGTGCTCTTCTGAGGCTATCTGGTGTCAAAAGCACTGATGCAAAGACTACTCTGCTTCACTTTGTGGTTGAACAAGTAGCTCAATTGGAGGGTAGAGACTTAGTGATCAATCAGAGAAGCCAAACTAGTACACCAAATTTGGATAATCTGACAGCCGAAGAGAGAAGAAAGGAGTACTTAATCCAAGGGTTACCAAAGTTGGGAGGCTTGAGTATTGAGCTATCTAATGTGAAGAAAGCAGCTACAATAGACTATGACAGCTTCATTCGTATGAGCTCCTCTCTCACTAGCCGTGTAGATGAAATTAGAAAGGTTTTGACACATTGTTGCAATGGGGAGACAGGAGGGTTTGCAAGAGAAATGAAAGGGTTTTTGGAGGAATGTGAGGAGGAGCTTAAGGTTGTGAGAGAAGAGCAGATTAGGGTTATGGAATTTGTGAAGAGAACAACGGAGTATTACCAAGCCAGAGCTGCGAAAGACAAAGAAGCTCAACCACTTCAGCTCTTTGTGATTGTTAGAGATTTTCTAGACATGGTTGATCTTGTTTGTGCAGAAATTTCAAGAAAGGTACAGAGGAAGAGTACTTCTACAACCAATGTGGGATCAGCATCACCTCCATTGTCACCTACAGTCCTAACACCAAAGAAGTTACAGAACTTCCAGTCACATTTCAATTCACATGTGTCTTGGTTATATTCCAGTGATTCAGAAGATGAGTTCAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005522 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0016049 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0033043 GO:0040007 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0060560 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

745

Amino Acids

82.88

Weight (kDa)

9.19

Isoelectric Point (pI)

46.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	282 - 682	2.5e-98	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24150 AT1G59910 AT1G70140
fragaria_vesca	FvH4_4g35240 FvH4_5g16231
malus_domestica	MD06G1182500.v1.1 MD13G1085100.v1.1 MD14G1188500.v1.1 MD16G1084300.v1.1
prunus_persica	Prupe.1G261700_v2.0.a1 Prupe.5G180600_v2.0.a1
pyrus_communis	pycom06g16140 pycom13g07360
rosa_chinensis	RchiOBHm_Chr4g0444841 RchiOBHm_Chr7g0179861
rosa_laevigata	RLG00000005317 RLG00000005796
rosa_multiflora	Rmu_sc0000096.1_g000028 Rmu_sc0001754.1_g000001 Rmu_sc0006845.1_g000009 Rmu_sc0031375.1_g000001 Rmu_sc0034891.1_g000002 Rmu_sc0034892.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273390 Rroxscaffold_5G00385330
rosa_rugosa	Rorug04G0355500 Rorug06G0428800
rosa_samantha	Rh4AG417000 Rh4BG428800 Rh4CG443600 Rh4DG424800 Rh7AG028700 Rh7BG027900 Rh7CG029600 Rh7DG029000
rosa_wichuraiana	Rw4G035740 Rw7G002300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	90
AciI	CCGC	5 cut(s)	386, 499, 656, 671, 674
AclWI	GGATC	4 cut(s)	918, 934, 1216, 2119
AcoI	YGGCCR	2 cut(s)	27, 265
AcsI	RAATTY	5 cut(s)	1135, 1191, 1645, 1940, 2064
AcuI	CTGAAG	4 cut(s)	875, 1005, 1284, 1991
AdeI	CACNNNGTG	1 cut(s)	1573
AfaI	GTAC	4 cut(s)	1639, 1685, 2079, 2092
AfiI	CCNNNNNNNGG	4 cut(s)	731, 813, 1366, 1709
AflII	CTTAAG	1 cut(s)	1904
AflIII	ACRYGT	1 cut(s)	2188
AhlI	ACTAGT	1 cut(s)	1634
AjnI	CCWGG	1 cut(s)	267
AjuI	GAANNNNNNNTTGG	6 cut(s)	281, 313, 948, 980, 1865, 1897
Alw21I	GWGCWC	4 cut(s)	824, 1414, 1516, 1787
Alw26I	GTCTC	4 cut(s)	1083, 1110, 1599, 1841
AlwI	GGATC	4 cut(s)	918, 934, 1216, 2119
AlwNI	CAGNNNCTG	1 cut(s)	1262
Ama87I	CYCGRG	3 cut(s)	1391, 1413, 1482
AoxI	GGCC	3 cut(s)	27, 265, 804
ApeKI	GCWGC	8 cut(s)	41, 50, 104, 490, 682, 884, 1748, 1979
ApoI	RAATTY	5 cut(s)	1135, 1191, 1645, 1940, 2064
Asp700I	GAANNNNTTC	1 cut(s)	1443
AspA2I	CCTAGG	1 cut(s)	730
AspLEI	GCGC	1 cut(s)	751
AsuC2I	CCSGG	2 cut(s)	814, 1334
AsuHPI	GGTGA	3 cut(s)	1177, 2112, 2124
AvaI	CYCGRG	3 cut(s)	1391, 1413, 1482
AvrII	CCTAGG	1 cut(s)	730
BalI	TGGCCA	2 cut(s)	29, 267
BanII	GRGCYC	3 cut(s)	824, 1414, 1787
BarI	GAAGNNNNNNTAC	2 cut(s)	1125, 1157
BbsI	GAAGAC	1 cut(s)	321
Bbv12I	GWGCWC	4 cut(s)	824, 1414, 1516, 1787
BbvCI	CCTCAGC	2 cut(s)	801, 808
BbvI	GCAGC	8 cut(s)	37, 53, 91, 477, 669, 871, 1760, 1966
BccI	CCATC	4 cut(s)	415, 607, 917, 1142
BceAI	ACGGC	2 cut(s)	63, 1785
BciT130I	CCWGG	1 cut(s)	269
BclI	TGATCA	3 cut(s)	417, 892, 1614
BcnI	CCSGG	2 cut(s)	814, 1334
BcoDI	GTCTC	4 cut(s)	1083, 1110, 1599, 1841
BcuI	ACTAGT	1 cut(s)	1634
BfaI	CTAG	9 cut(s)	101, 257, 569, 726, 731, 1064, 1635, 1797, 2036
BfmI	CTRYAG	3 cut(s)	91, 1376, 2136
BfoI	RGCGCY	1 cut(s)	752
BfrI	CTTAAG	1 cut(s)	1904
BlnI	CCTAGG	1 cut(s)	730
BmcAI	AGTACT	2 cut(s)	1685, 2092
Bme1390I	CCNGG	3 cut(s)	269, 814, 1334
BmeT110I	CYCGRG	3 cut(s)	1391, 1413, 1482
BmiI	GGNNCC	1 cut(s)	113
BmrFI	CCNGG	3 cut(s)	269, 814, 1334
BmrI	ACTGGG	1 cut(s)	877
BmsI	GCATC	4 cut(s)	337, 1249, 1537, 2126
BmuI	ACTGGG	1 cut(s)	877
BpiI	GAAGAC	1 cut(s)	321
BplI	GAGNNNNNCTC	2 cut(s)	1774, 1806
BpmI	CTGGAG	1 cut(s)	447
Bpu10I	CCTNAGC	3 cut(s)	182, 801, 808
BpuEI	CTTGAG	4 cut(s)	268, 1035, 1349, 1738
BpuMI	CCSGG	2 cut(s)	814, 1334
BsaBI	GATNNNNATC	2 cut(s)	1220, 2116
BsaJI	CCNNGG	5 cut(s)	45, 288, 730, 813, 1693
Bsc4I	CCNNNNNNNGG	4 cut(s)	731, 813, 1366, 1709
Bse1I	ACTGG	3 cut(s)	872, 2170, 2208
Bse3DI	GCAATG	7 cut(s)	36, 139, 194, 479, 860, 1329, 1846
Bse8I	GATNNNNATC	2 cut(s)	1220, 2116
BseBI	CCWGG	1 cut(s)	269
BseDI	CCNNGG	5 cut(s)	45, 288, 730, 813, 1693
BseGI	GGATG	3 cut(s)	241, 352, 1281
BseJI	GATNNNNATC	2 cut(s)	1220, 2116
BseLI	CCNNNNNNNGG	4 cut(s)	731, 813, 1366, 1709
BseMI	GCAATG	7 cut(s)	36, 139, 194, 479, 860, 1329, 1846
BseMII	CTCAG	5 cut(s)	196, 792, 822, 1254, 1511
BseNI	ACTGG	3 cut(s)	872, 2170, 2208
BseRI	GAGGAG	4 cut(s)	573, 1777, 1910, 1913
BseXI	GCAGC	8 cut(s)	37, 53, 91, 477, 669, 871, 1760, 1966
BsgI	GTGCAG	2 cut(s)	504, 2079
BshFI	GGCC	3 cut(s)	29, 267, 806
BsiHKAI	GWGCWC	4 cut(s)	824, 1414, 1516, 1787
BsiHKCI	CYCGRG	3 cut(s)	1391, 1413, 1482
BsiSI	CCGG	3 cut(s)	72, 813, 1333
BslFI	GGGAC	2 cut(s)	884, 1280
BslI	CCNNNNNNNGG	4 cut(s)	731, 813, 1366, 1709
BsmAI	GTCTC	4 cut(s)	1083, 1110, 1599, 1841
BsmFI	GGGAC	2 cut(s)	884, 1280
BsmI	GAATGC	1 cut(s)	1474
BsnI	GGCC	3 cut(s)	29, 267, 806
BsoBI	CYCGRG	3 cut(s)	1391, 1413, 1482
Bsp1286I	GDGCHC	4 cut(s)	824, 1414, 1516, 1787
BspACI	CCGC	5 cut(s)	386, 499, 656, 671, 674
BspANI	GGCC	3 cut(s)	29, 267, 806
BspCNI	CTCAG	5 cut(s)	195, 793, 821, 1255, 1512
BspHI	TCATGA	1 cut(s)	169
BspLI	GGNNCC	1 cut(s)	113
BspPI	GGATC	4 cut(s)	918, 934, 1216, 2119
BspQI	GCTCTTC	2 cut(s)	1521, 1914
BspTI	CTTAAG	1 cut(s)	1904
BsrDI	GCAATG	7 cut(s)	36, 139, 194, 479, 860, 1329, 1846
BsrI	ACTGG	3 cut(s)	872, 2170, 2208
BssECI	CCNNGG	5 cut(s)	45, 288, 730, 813, 1693
BssT1I	CCWWGG	3 cut(s)	288, 730, 1693
Bst2UI	CCWGG	1 cut(s)	269
Bst4CI	ACNGT	1 cut(s)	2140
Bst6I	CTCTTC	7 cut(s)	1146, 1206, 1521, 1662, 1914, 1943, 2081
BstAFI	CTTAAG	1 cut(s)	1904
BstC8I	GCNNGC	3 cut(s)	27, 564, 1254
BstDEI	CTNAG	9 cut(s)	182, 687, 801, 808, 1263, 1406, 1508, 1520, 1609
BstDSI	CCRYGG	1 cut(s)	45
BstEII	GGTNACC	1 cut(s)	1698
BstENI	CCTNNNNNAGG	1 cut(s)	729
BstF5I	GGATG	3 cut(s)	241, 352, 1281
BstH2I	RGCGCY	1 cut(s)	752
BstHHI	GCGC	1 cut(s)	751
BstMAI	GTCTC	4 cut(s)	1083, 1110, 1599, 1841
BstNI	CCWGG	1 cut(s)	269
BstNSI	RCATGY	1 cut(s)	2192
BstPI	GGTNACC	1 cut(s)	1698
BstSCI	CCNGG	3 cut(s)	267, 812, 1332
BstSFI	CTRYAG	3 cut(s)	91, 1376, 2136
BstV1I	GCAGC	8 cut(s)	37, 53, 91, 477, 669, 871, 1760, 1966
BstV2I	GAAGAC	1 cut(s)	321
BstX2I	RGATCY	1 cut(s)	1221
BstXI	CCANNNNNNTGG	2 cut(s)	867, 1235
BstYI	RGATCY	1 cut(s)	1221
BsuRI	GGCC	3 cut(s)	29, 267, 806
BtgI	CCRYGG	1 cut(s)	45
BtsCI	GGATG	3 cut(s)	241, 352, 1281
BtsI	GCAGTG	2 cut(s)	199, 575
BtsIMutI	CAGTG	7 cut(s)	199, 575, 865, 918, 993, 1542, 2215
Cac8I	GCNNGC	3 cut(s)	27, 564, 1254
CaiI	CAGNNNCTG	1 cut(s)	1262
CciI	TCATGA	1 cut(s)	169
CfoI	GCGC	1 cut(s)	751
Csp6I	GTAC	4 cut(s)	1638, 1684, 2078, 2091
CspCI	CAANNNNNGTGG	2 cut(s)	2088, 2123
CviAII	CATG	4 cut(s)	170, 425, 2041, 2189
CviQI	GTAC	4 cut(s)	1638, 1684, 2078, 2091
DdeI	CTNAG	9 cut(s)	182, 687, 801, 808, 1263, 1406, 1508, 1520, 1609
DraIII	CACNNNGTG	1 cut(s)	1573
EaeI	YGGCCR	2 cut(s)	27, 265
Eam1104I	CTCTTC	7 cut(s)	1146, 1206, 1521, 1662, 1914, 1943, 2081
EarI	CTCTTC	7 cut(s)	1146, 1206, 1521, 1662, 1914, 1943, 2081
Ecl136II	GAGCTC	3 cut(s)	822, 1412, 1785
Eco130I	CCWWGG	3 cut(s)	288, 730, 1693
Eco147I	AGGCCT	1 cut(s)	806
Eco24I	GRGCYC	3 cut(s)	824, 1414, 1787
Eco53kI	GAGCTC	3 cut(s)	822, 1412, 1785
Eco57I	CTGAAG	4 cut(s)	875, 1005, 1284, 1991
Eco88I	CYCGRG	3 cut(s)	1391, 1413, 1482
Eco91I	GGTNACC	1 cut(s)	1698
EcoICRI	GAGCTC	3 cut(s)	822, 1412, 1785
EcoNI	CCTNNNNNAGG	1 cut(s)	729
EcoO65I	GGTNACC	1 cut(s)	1698
EcoRII	CCWGG	1 cut(s)	267
EcoT14I	CCWWGG	3 cut(s)	288, 730, 1693
EcoT38I	GRGCYC	3 cut(s)	824, 1414, 1787
ErhI	CCWWGG	3 cut(s)	288, 730, 1693
FaeI	CATG	4 cut(s)	173, 428, 2044, 2192
FalI	AAGNNNNNCTT	4 cut(s)	459, 491, 1670, 1702
FaqI	GGGAC	2 cut(s)	884, 1280
FatI	CATG	4 cut(s)	169, 424, 2040, 2188
FauI	CCCGC	1 cut(s)	678
FbaI	TGATCA	3 cut(s)	417, 892, 1614
FblI	GTMKAC	1 cut(s)	90
FokI	GGATG	3 cut(s)	248, 359, 1268
FriOI	GRGCYC	3 cut(s)	824, 1414, 1787
FspBI	CTAG	9 cut(s)	101, 257, 569, 726, 731, 1064, 1635, 1797, 2036
GlaI	GCGC	1 cut(s)	750
GsuI	CTGGAG	1 cut(s)	447
HaeII	RGCGCY	1 cut(s)	752
HaeIII	GGCC	3 cut(s)	29, 267, 806
HapII	CCGG	3 cut(s)	72, 813, 1333
HhaI	GCGC	1 cut(s)	751
Hin1II	CATG	4 cut(s)	173, 428, 2044, 2192
Hin6I	GCGC	1 cut(s)	749
HinP1I	GCGC	1 cut(s)	749
HindIII	AAGCTT	2 cut(s)	139, 1250
HinfI	GANTC	8 cut(s)	75, 166, 572, 1158, 1265, 1370, 1444, 2213
HpaII	CCGG	3 cut(s)	72, 813, 1333
HphI	GGTGA	3 cut(s)	1177, 2112, 2124
Hpy166II	GTNNAC	2 cut(s)	91, 1640
Hpy188I	TCNGA	8 cut(s)	412, 935, 1168, 1521, 1623, 1659, 2218, 2231
Hpy188III	TCNNGA	8 cut(s)	170, 464, 1064, 1145, 1219, 1436, 2036, 2070
Hpy8I	GTNNAC	2 cut(s)	91, 1640
HpyAV	CCTTC	2 cut(s)	199, 1308
HpyCH4III	ACNGT	1 cut(s)	2140
HpyF3I	CTNAG	9 cut(s)	182, 687, 801, 808, 1263, 1406, 1508, 1520, 1609
Hsp92II	CATG	4 cut(s)	173, 428, 2044, 2192
HspAI	GCGC	1 cut(s)	749
Ksp22I	TGATCA	3 cut(s)	417, 892, 1614
LguI	GCTCTTC	2 cut(s)	1521, 1914
LmnI	GCTCC	4 cut(s)	111, 1402, 1790, 1900
Lsp1109I	GCAGC	8 cut(s)	37, 53, 91, 477, 669, 871, 1760, 1966
LweI	GCATC	4 cut(s)	337, 1249, 1537, 2126
MaeI	CTAG	9 cut(s)	101, 257, 569, 726, 731, 1064, 1635, 1797, 2036
MaeIII	GTNAC	5 cut(s)	1371, 1698, 2130, 2157, 2172
MfeI	CAATTG	1 cut(s)	1592
MflI	RGATCY	1 cut(s)	1221
MhlI	GDGCHC	4 cut(s)	824, 1414, 1516, 1787
MlsI	TGGCCA	2 cut(s)	29, 267
MluNI	TGGCCA	2 cut(s)	29, 267
MlyI	GAGTC	4 cut(s)	175, 1152, 1274, 1379
MmeI	TCCRAC	3 cut(s)	482, 534, 1223
Mox20I	TGGCCA	2 cut(s)	29, 267
MroXI	GAANNNNTTC	1 cut(s)	1443
MscI	TGGCCA	2 cut(s)	29, 267
MseI	TTAA	3 cut(s)	1428, 1688, 1905
MslI	CAYNNNNRTG	1 cut(s)	1778
Msp20I	TGGCCA	2 cut(s)	29, 267
MspA1I	CMGCKG	2 cut(s)	499, 682
MspCI	CTTAAG	1 cut(s)	1904
MspI	CCGG	3 cut(s)	72, 813, 1333
MspR9I	CCNGG	3 cut(s)	269, 814, 1334
MunI	CAATTG	1 cut(s)	1592
Mva1269I	GAATGC	1 cut(s)	1474
MvaI	CCWGG	1 cut(s)	269
NciI	CCSGG	2 cut(s)	814, 1334
NlaIII	CATG	4 cut(s)	173, 428, 2044, 2192
NlaIV	GGNNCC	1 cut(s)	113
NmuCI	GTSAC	3 cut(s)	1371, 2130, 2172
NspI	RCATGY	1 cut(s)	2192
PaeR7I	CTCGAG	2 cut(s)	1413, 1482
PagI	TCATGA	1 cut(s)	169
PceI	AGGCCT	1 cut(s)	806
PciI	ACATGT	1 cut(s)	2188
PciSI	GCTCTTC	2 cut(s)	1521, 1914
PctI	GAATGC	1 cut(s)	1474
PdmI	GAANNNNTTC	1 cut(s)	1443
PfeI	GAWTC	4 cut(s)	75, 572, 1444, 2213
PfoI	TCCNGGA	1 cut(s)	1332
PleI	GAGTC	4 cut(s)	174, 1152, 1273, 1378
PpsI	GAGTC	4 cut(s)	174, 1152, 1273, 1378
PscI	ACATGT	1 cut(s)	2188
Psp124BI	GAGCTC	3 cut(s)	824, 1414, 1787
Psp6I	CCWGG	1 cut(s)	267
PspEI	GGTNACC	1 cut(s)	1698
PspGI	CCWGG	1 cut(s)	267
PspN4I	GGNNCC	1 cut(s)	113
PspXI	VCTCGAGB	2 cut(s)	1413, 1482
PstNI	CAGNNNCTG	1 cut(s)	1262
PsuI	RGATCY	1 cut(s)	1221
PvuII	CAGCTG	1 cut(s)	682
RsaI	GTAC	4 cut(s)	1639, 1685, 2079, 2092
RsaNI	GTAC	4 cut(s)	1638, 1684, 2078, 2091
RseI	CAYNNNNRTG	1 cut(s)	1778
SacI	GAGCTC	3 cut(s)	824, 1414, 1787
SapI	GCTCTTC	2 cut(s)	1521, 1914
SaqAI	TTAA	3 cut(s)	1428, 1688, 1905
ScaI	AGTACT	2 cut(s)	1685, 2092
SchI	GAGTC	4 cut(s)	175, 1152, 1274, 1379
ScrFI	CCNGG	3 cut(s)	269, 814, 1334
SduI	GDGCHC	4 cut(s)	824, 1414, 1516, 1787
SfaNI	GCATC	4 cut(s)	337, 1249, 1537, 2126
SfcI	CTRYAG	3 cut(s)	91, 1376, 2136
Sfr274I	CTCGAG	2 cut(s)	1413, 1482
SlaI	CTCGAG	2 cut(s)	1413, 1482
SmiMI	CAYNNNNRTG	1 cut(s)	1778
SmlI	CTYRAG	7 cut(s)	247, 1050, 1364, 1413, 1482, 1717, 1904
SmoI	CTYRAG	7 cut(s)	247, 1050, 1364, 1413, 1482, 1717, 1904
SpeI	ACTAGT	1 cut(s)	1634
SseBI	AGGCCT	1 cut(s)	806
SsiI	CCGC	5 cut(s)	386, 499, 656, 671, 674
SspMI	CTAG	9 cut(s)	101, 257, 569, 726, 731, 1064, 1635, 1797, 2036
SstI	GAGCTC	3 cut(s)	824, 1414, 1787
StuI	AGGCCT	1 cut(s)	806
StyD4I	CCNGG	3 cut(s)	267, 812, 1332
StyI	CCWWGG	3 cut(s)	288, 730, 1693
TaaI	ACNGT	1 cut(s)	2140
TaqI	TCGA	4 cut(s)	219, 1176, 1414, 1483
TatI	WGTACW	3 cut(s)	1637, 1683, 2090
TauI	GCSGC	2 cut(s)	502, 676
TfiI	GAWTC	4 cut(s)	75, 572, 1444, 2213
Tru1I	TTAA	3 cut(s)	1428, 1688, 1905
Tru9I	TTAA	3 cut(s)	1428, 1688, 1905
TscAI	CASTG	7 cut(s)	199, 582, 872, 925, 1000, 1549, 2215
TseFI	GTSAC	3 cut(s)	1371, 2130, 2172
TseI	GCWGC	8 cut(s)	41, 50, 104, 490, 682, 884, 1748, 1979
Tsp45I	GTSAC	3 cut(s)	1371, 2130, 2172
TspDTI	ATGAA	9 cut(s)	186, 327, 389, 468, 1048, 1481, 1762, 1824, 1886
TspGWI	ACGGA	1 cut(s)	1973
TspRI	CASTG	7 cut(s)	199, 582, 872, 925, 1000, 1549, 2215
Vha464I	CTTAAG	1 cut(s)	1904
XagI	CCTNNNNNAGG	1 cut(s)	729
XapI	RAATTY	5 cut(s)	1135, 1191, 1645, 1940, 2064
XbaI	TCTAGA	2 cut(s)	1063, 2035
XceI	RCATGY	1 cut(s)	2192
XhoI	CTCGAG	2 cut(s)	1413, 1482
XmaJI	CCTAGG	1 cut(s)	730
XmiI	GTMKAC	1 cut(s)	90
XmnI	GAANNNNTTC	1 cut(s)	1443
XspI	CTAG	9 cut(s)	101, 257, 569, 726, 731, 1064, 1635, 1797, 2036
ZrmI	AGTACT	2 cut(s)	1685, 2092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.