Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0003211

Physical Location & Seq

Genomic Coordinates Forward (+)

62585406 .. 62587911

Gene Structure 2506 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G035740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGGCCGGCGCTTTACATCTAATCATTATCCGGCCATGGCTTCTTCTTCTTCTGTTTTGTATTCTCAGTGGTAATTTTTTTCGTACTTGCTACGGTCAATCACAAAACATTGAGACTTTCTTTCCTTTTCCATTAACTCCAACCCCGGCGCCGGCGCCGGCTCCGCCGCAACAGCCTCTGCCGCTGCCGCTGCCGCTGCCGGAAAAGAAGTCTAATGACAACAGCAACATTGCAAAGGCGGCAGCGGCAACCGCAGCCAGCACTCTGGTGGTGTGTGCGGTGGTCTTCTTTTTTGTACAACGGTGCATTGTTGCTAAGCGGAGGAGGAAGATCAGCGGCGGTGTTATTGGTGCTGGTGCTAATAACAATTCCGGCTCACGAGGAAGCCGTCGTGGTCAACCGGCTGCGGTCAATGGCAATGAGTTTGAAAGGTATGATGGGAATCTCAAGGGGTTTATTGTGGACGAGGATGGTCTTGATGTGCTGTATTGGAGAAAACTCGAGGCCAAAAACTCGAAAAAGAAGAGTTTCAAGAAGGAGGCGTTGCGAAATCGCAATATTGGAGACGAAATTGATGAGTATGATGATGGAAATGGAGAAGGGACTAGCAGAGAGAATGAGCTTCCTCTGTTTCGAGGCAGGTCTTCGACGTCTGACATTGATTTAGTGCCGGAAGGAAATGATCGGGTTCGGATTGGAAGTAGTAGTAGAATGATGGCTGCTAATAAGGGTGTTGAGATTAATCCAGAGCCAGTGGTGGAGCTGTCGCTTCAGTCTTCGGGTTCCTCGCCTCCACCTCATTCTCCACCACCAACACCACCTCCTCTGCCAATGAAAGCCCCTGCAATGCCACTACCGCCGCCTCCTCCACCAGTTCCGGCTATGAAGGGCCCGGGACTGCCGCCTCCTCCACCACCAAAGCCTAAAGCCAAGGGGGTGAAGCTGAAGCCACTACATTGGGACAAGGTGAACACTAATCATGAGCATTCCATGGTGTGGGACAAAATTGATAAGGGTTCGTTCAGATTTGATGGAGACCTTATGGAAGCTCTTTTTGGAACTGTTGCGACTAATCGGAAATCTCCTGAAAGAGGCACTGGTTCATCGTCACAAATTTGCATCTTAGATGAGAGGAAGTCTCAGAACTTTGCAATTGTTATAAAATCATTGACCATTTCTATCGAAGATATTCTTGATGTTCTAAATGAGGGCAGAGGTTTAAGTGCTGAAAATCTCGAAAAGCTTGCTAGGATTGCCCCAACTGAAGAGGAAATAGCTCAAATTCTTGCGTACAATGAAGACCCTACAAGGCTTGCTGATGCTGAATGCTTCCTCTACCACATTTTGAAAGCTGTTCCATCGGCTTTTACTCGACTCAATGCCATGCATTTCAGACACAACTATGAGCAAGAGATTGTCCAACTCAAAGAGTCTCTACAGACAATTGAATTGGGATGCAAGGAACTTCGAACTAGAGGACTGTTTATGAAGCTGCTAGAAGCGATTCTCAAGGCTGGAAACCGAATGAATGCAGGAACTTCGAGAGGGAATGCGCAAGCTTTCAAGCTCAGTTCTCTTCGAAAACTATCTGATGTTCGAAGTAGTGATGGGAAGACTACTCTTCTTCATTTTGTTGTGGAAGAAGTGGTGCGGTCTGAGGGAAAACGGGGTGTTTTGAACAGGAACCACAGCTTGAGCCACAGCGGCAGCCAGAGCAGTAACGGCAACATGAGCTCTGAGCAGAATGTAAAATCGAAAGAGGATAGAGAGAAGGAGTATATGATGTTAGGATTGCCAGTGGTTGGGGGCATCAGTTCTGAGTTTTCAAATGTGAAGAAGGCAGCAACTATAGACTATGACAGCTTTGCAATAGCTTGCTCGGCTCTCACTACACGAGCTGCGGAAACTAGAGAACTAGTACTCCAATGTGAGAAGGATGGTGGTGGAAGATTTGTTTTTGAGATGAACGATTTTCTTGAAGATGCCGAAGAAGAGCTAAAGGCGATGGCAAAAGAGCAGAGTAGGGTGATGGAATTTGTGAAGACCACTACGGAATATTACCAAGGAGGAGCTTCAAAGGAAAAGGGATCACACCCATTTCAACTATTTGTTGTGGTTAAGGATTTTCTAGGCATGGTTGATCAAGCATGCGTGGAAATATCTCGAAATGTGCAGAGGAGGAAGGCAGTGACGGCAAGTTCAGGAACATCAACGTCACCAGACTCACCGCCATCAAGGAACCCTGTAAGGTTTCCGGTCTTGCCAAAAAATTTCATGTCAGGAACCTCTAGAAGTAATTCTAGTGGATCAGATAATGAAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005522 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0016049 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0033043 GO:0040007 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0060560 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

774

Amino Acids

84.8

Weight (kDa)

8.76

Isoelectric Point (pI)

56.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	308 - 713	4.6e-100	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24150 AT1G59910 AT1G70140
fragaria_vesca	FvH4_4g35240 FvH4_5g16231
malus_domestica	MD06G1182500.v1.1 MD13G1085100.v1.1 MD14G1188500.v1.1 MD16G1084300.v1.1
prunus_persica	Prupe.1G261700_v2.0.a1 Prupe.5G180600_v2.0.a1
pyrus_communis	pycom06g16140 pycom13g07360
rosa_chinensis	RchiOBHm_Chr4g0444841 RchiOBHm_Chr7g0179861
rosa_laevigata	RLG00000005317 RLG00000005796
rosa_multiflora	Rmu_sc0000096.1_g000028 Rmu_sc0001754.1_g000001 Rmu_sc0006845.1_g000009 Rmu_sc0031375.1_g000001 Rmu_sc0034891.1_g000002 Rmu_sc0034892.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273390 Rroxscaffold_5G00385330
rosa_rugosa	Rorug04G0355500 Rorug06G0428800
rosa_samantha	Rh4AG417000 Rh4BG428800 Rh4CG443600 Rh4DG424800 Rh7AG028700 Rh7BG027900 Rh7CG029600 Rh7DG029000
rosa_wichuraiana	Rw4G035740 Rw7G002300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1160
AatII	GACGTC	1 cut(s)	653
Acc16I	TGCGCA	1 cut(s)	1554
Acc36I	ACCTGC	1 cut(s)	630
AccB1I	GGYRCC	2 cut(s)	148, 154
AccB7I	CCANNNNNTGG	2 cut(s)	996, 1802
AclWI	GGATC	2 cut(s)	2095, 2314
AcoI	YGGCCR	2 cut(s)	3, 32
AcsI	RAATTY	4 cut(s)	1113, 1281, 2033, 2269
AcuI	CTGAAG	3 cut(s)	755, 965, 1284
AcyI	GRCGYC	3 cut(s)	149, 155, 650
AfaI	GTAC	4 cut(s)	85, 297, 1292, 1920
AfiI	CCNNNNNNNGG	4 cut(s)	151, 996, 1091, 1802
AhlI	ACTAGT	1 cut(s)	1915
AjuI	GAANNNNNNNTTGG	2 cut(s)	1038, 1070
AleI	CACNNNNGTG	1 cut(s)	266
AloI	GAACNNNNNNTCC	2 cut(s)	1905, 1937
Alw21I	GWGCWC	1 cut(s)	1736
Alw26I	GTCTC	5 cut(s)	107, 558, 1029, 1143, 1437
AlwI	GGATC	2 cut(s)	2095, 2314
AlwNI	CAGNNNCTG	1 cut(s)	178
Ama87I	CYCGRG	2 cut(s)	500, 892
AoxI	GGCC	4 cut(s)	3, 32, 504, 889
ApaI	GGGCCC	1 cut(s)	893
ApoI	RAATTY	4 cut(s)	1113, 1281, 2033, 2269
AseI	ATTAAT	1 cut(s)	741
Asp700I	GAANNNNTTC	4 cut(s)	527, 1188, 1503, 2296
AspLEI	GCGC	4 cut(s)	11, 151, 157, 1555
AspS9I	GGNCC	2 cut(s)	889, 890
AsuC2I	CCSGG	3 cut(s)	146, 893, 894
AsuHPI	GGTGA	5 cut(s)	949, 979, 2038, 2208, 2217
AsuII	TTCGAA	3 cut(s)	1468, 1579, 1597
AvaI	CYCGRG	2 cut(s)	500, 892
BaeGI	GKGCMC	1 cut(s)	893
BanI	GGYRCC	2 cut(s)	148, 154
BanII	GRGCYC	2 cut(s)	893, 1736
BauI	CACGAG	2 cut(s)	378, 1893
BbsI	GAAGAC	6 cut(s)	277, 636, 768, 1305, 1619, 2048
Bbv12I	GWGCWC	1 cut(s)	1736
BceAI	ACGGC	3 cut(s)	372, 1738, 2208
BcgI	CGANNNNNNTGC	4 cut(s)	1226, 1260, 1521, 1555
BclI	TGATCA	1 cut(s)	2140
BcnI	CCSGG	3 cut(s)	146, 893, 894
BcoDI	GTCTC	5 cut(s)	107, 558, 1029, 1143, 1437
BcuI	ACTAGT	1 cut(s)	1915
BfaI	CTAG	9 cut(s)	606, 1248, 1473, 1496, 1908, 1916, 2129, 2289, 2301
BfmI	CTRYAG	2 cut(s)	1436, 1848
BfoI	RGCGCY	3 cut(s)	12, 152, 158
BfuAI	ACCTGC	1 cut(s)	630
BglI	GCCNNNNNGGC	1 cut(s)	1704
BlpI	GCTNAGC	1 cut(s)	315
BmcAI	AGTACT	1 cut(s)	1920
Bme1390I	CCNGG	3 cut(s)	146, 893, 894
BmeT110I	CYCGRG	2 cut(s)	500, 892
BmgT120I	GGNCC	2 cut(s)	889, 890
BmiI	GGNNCC	8 cut(s)	150, 156, 162, 784, 891, 1685, 2240, 2284
BmrFI	CCNGG	3 cut(s)	146, 893, 894
BmsI	GCATC	5 cut(s)	1128, 1309, 1445, 1818, 1972
BpiI	GAAGAC	6 cut(s)	277, 636, 768, 1305, 1619, 2048
BplI	GAGNNNNNCTC	2 cut(s)	1123, 1155
Bpu1102I	GCTNAGC	1 cut(s)	315
Bpu14I	TTCGAA	3 cut(s)	1468, 1579, 1597
BpuEI	CTTGAG	3 cut(s)	431, 1493, 1714
BpuMI	CCSGG	3 cut(s)	146, 893, 894
BsaBI	GATNNNNATC	1 cut(s)	441
BsaHI	GRCGYC	3 cut(s)	149, 155, 650
BsaI	GGTCTC	1 cut(s)	1029
BsaJI	CCNNGG	6 cut(s)	35, 144, 892, 930, 990, 2062
BsaWI	WCCGGW	1 cut(s)	2254
BsaXI	ACNNNNNCTCC	4 cut(s)	805, 835, 1905, 1935
Bsc4I	CCNNNNNNNGG	4 cut(s)	151, 996, 1091, 1802
Bse118I	RCCGGY	4 cut(s)	5, 151, 157, 400
Bse1I	ACTGG	4 cut(s)	752, 872, 1102, 1796
Bse3DI	GCAATG	3 cut(s)	228, 424, 852
Bse8I	GATNNNNATC	1 cut(s)	441
BseDI	CCNNGG	6 cut(s)	35, 144, 892, 930, 990, 2062
BseGI	GGATG	3 cut(s)	475, 1460, 1942
BseJI	GATNNNNATC	1 cut(s)	441
BseLI	CCNNNNNNNGG	4 cut(s)	151, 996, 1091, 1802
BseMI	GCAATG	3 cut(s)	228, 424, 852
BseMII	CTCAG	6 cut(s)	79, 1154, 1582, 1647, 1728, 1809
BseNI	ACTGG	4 cut(s)	752, 872, 1102, 1796
BseRI	GAGGAG	6 cut(s)	337, 813, 855, 897, 2082, 2191
BseSI	GKGCMC	1 cut(s)	893
BsgI	GTGCAG	1 cut(s)	2192
BshFI	GGCC	4 cut(s)	5, 34, 506, 891
BshNI	GGYRCC	2 cut(s)	148, 154
BsiHKAI	GWGCWC	1 cut(s)	1736
BsiHKCI	CYCGRG	2 cut(s)	500, 892
BslFI	GGGAC	4 cut(s)	616, 909, 974, 1013
BslI	CCNNNNNNNGG	4 cut(s)	151, 996, 1091, 1802
BsmAI	GTCTC	5 cut(s)	107, 558, 1029, 1143, 1437
BsmBI	CGTCTC	1 cut(s)	558
BsmFI	GGGAC	4 cut(s)	616, 909, 974, 1013
BsmI	GAATGC	4 cut(s)	985, 1331, 1534, 1555
BsnI	GGCC	4 cut(s)	5, 34, 506, 891
Bso31I	GGTCTC	1 cut(s)	1029
BsoBI	CYCGRG	2 cut(s)	500, 892
Bsp119I	TTCGAA	3 cut(s)	1468, 1579, 1597
Bsp120I	GGGCCC	1 cut(s)	889
Bsp1286I	GDGCHC	2 cut(s)	893, 1736
Bsp1407I	TGTACA	1 cut(s)	295
Bsp143I	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
Bsp1720I	GCTNAGC	1 cut(s)	315
Bsp19I	CCATGG	2 cut(s)	35, 990
BspANI	GGCC	4 cut(s)	5, 34, 506, 891
BspCNI	CTCAG	6 cut(s)	78, 1153, 1581, 1648, 1729, 1810
BspHI	TCATGA	1 cut(s)	979
BspLI	GGNNCC	8 cut(s)	150, 156, 162, 784, 891, 1685, 2240, 2284
BspMI	ACCTGC	1 cut(s)	630
BspPI	GGATC	2 cut(s)	2095, 2314
BspQI	GCTCTTC	1 cut(s)	1986
BspT104I	TTCGAA	3 cut(s)	1468, 1579, 1597
BspT107I	GGYRCC	2 cut(s)	148, 154
BspTNI	GGTCTC	1 cut(s)	1029
BsrDI	GCAATG	3 cut(s)	228, 424, 852
BsrFI	RCCGGY	4 cut(s)	5, 151, 157, 400
BsrGI	TGTACA	1 cut(s)	295
BsrI	ACTGG	4 cut(s)	752, 872, 1102, 1796
BssAI	RCCGGY	4 cut(s)	5, 151, 157, 400
BssECI	CCNNGG	6 cut(s)	35, 144, 892, 930, 990, 2062
BssMI	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
BssNI	GRCGYC	3 cut(s)	149, 155, 650
BssSI	CACGAG	2 cut(s)	378, 1893
BssT1I	CCWWGG	4 cut(s)	35, 930, 990, 2062
Bst2BI	CACGAG	2 cut(s)	378, 1893
Bst4CI	ACNGT	4 cut(s)	95, 303, 1063, 1482
Bst6I	CTCTTC	5 cut(s)	518, 1260, 1581, 1626, 1986
BstACI	GRCGYC	3 cut(s)	149, 155, 650
BstAUI	TGTACA	1 cut(s)	295
BstBI	TTCGAA	3 cut(s)	1468, 1579, 1597
BstC8I	GCNNGC	9 cut(s)	7, 153, 159, 259, 1245, 1314, 1557, 1876, 2149
BstDEI	CTNAG	8 cut(s)	65, 315, 1123, 1140, 1568, 1656, 1737, 1818
BstDSI	CCRYGG	2 cut(s)	35, 990
BstENI	CCTNNNNNAGG	1 cut(s)	1089
BstF5I	GGATG	3 cut(s)	475, 1460, 1942
BstH2I	RGCGCY	3 cut(s)	12, 152, 158
BstHHI	GCGC	4 cut(s)	11, 151, 157, 1555
BstKTI	GATC	5 cut(s)	333, 685, 2090, 2143, 2309
BstMAI	GTCTC	5 cut(s)	107, 558, 1029, 1143, 1437
BstMBI	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
BstNSI	RCATGY	1 cut(s)	2151
BstSCI	CCNGG	3 cut(s)	144, 891, 892
BstSFI	CTRYAG	2 cut(s)	1436, 1848
BstSLI	GKGCMC	1 cut(s)	893
BstV2I	GAAGAC	6 cut(s)	277, 636, 768, 1305, 1619, 2048
BstXI	CCANNNNNNTGG	2 cut(s)	265, 957
BsuRI	GGCC	4 cut(s)	5, 34, 506, 891
BtgI	CCRYGG	2 cut(s)	35, 990
BtgZI	GCGATG	1 cut(s)	2018
BtsCI	GGATG	3 cut(s)	475, 1460, 1942
BtsI	GCAGTG	1 cut(s)	2193
BtsIMutI	CAGTG	5 cut(s)	73, 759, 1095, 1803, 2193
BveI	ACCTGC	1 cut(s)	630
Cac8I	GCNNGC	9 cut(s)	7, 153, 159, 259, 1245, 1314, 1557, 1876, 2149
CaiI	CAGNNNCTG	1 cut(s)	178
CciI	TCATGA	1 cut(s)	979
CfoI	GCGC	4 cut(s)	11, 151, 157, 1555
Cfr10I	RCCGGY	4 cut(s)	5, 151, 157, 400
Cfr13I	GGNCC	2 cut(s)	889, 890
Cfr9I	CCCGGG	1 cut(s)	892
Csp6I	GTAC	4 cut(s)	84, 296, 1291, 1919
CviAII	CATG	8 cut(s)	36, 980, 991, 1384, 1729, 2134, 2148, 2275
CviQI	GTAC	4 cut(s)	84, 296, 1291, 1919
DdeI	CTNAG	8 cut(s)	65, 315, 1123, 1140, 1568, 1656, 1737, 1818
DinI	GGCGCC	2 cut(s)	150, 156
DpnI	GATC	5 cut(s)	332, 684, 2089, 2142, 2308
DpnII	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
EaeI	YGGCCR	2 cut(s)	3, 32
Eam1104I	CTCTTC	5 cut(s)	518, 1260, 1581, 1626, 1986
EarI	CTCTTC	5 cut(s)	518, 1260, 1581, 1626, 1986
EciI	GGCGGA	1 cut(s)	153
Ecl136II	GAGCTC	1 cut(s)	1734
Eco130I	CCWWGG	4 cut(s)	35, 930, 990, 2062
Eco24I	GRGCYC	2 cut(s)	893, 1736
Eco31I	GGTCTC	1 cut(s)	1029
Eco53kI	GAGCTC	1 cut(s)	1734
Eco57I	CTGAAG	3 cut(s)	755, 965, 1284
Eco88I	CYCGRG	2 cut(s)	500, 892
EcoICRI	GAGCTC	1 cut(s)	1734
EcoNI	CCTNNNNNAGG	1 cut(s)	1089
EcoO109I	RGGNCCY	1 cut(s)	889
EcoT14I	CCWWGG	4 cut(s)	35, 930, 990, 2062
EcoT22I	ATGCAT	1 cut(s)	1389
EcoT38I	GRGCYC	2 cut(s)	893, 1736
EgeI	GGCGCC	2 cut(s)	150, 156
EheI	GGCGCC	2 cut(s)	150, 156
ErhI	CCWWGG	4 cut(s)	35, 930, 990, 2062
Esp3I	CGTCTC	1 cut(s)	558
FaeI	CATG	8 cut(s)	39, 983, 994, 1387, 1732, 2137, 2151, 2278
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	4 cut(s)	616, 909, 974, 1013
FatI	CATG	8 cut(s)	35, 979, 990, 1383, 1728, 2133, 2147, 2274
FbaI	TGATCA	1 cut(s)	2140
FokI	GGATG	3 cut(s)	482, 1467, 1949
FriOI	GRGCYC	2 cut(s)	893, 1736
FspBI	CTAG	9 cut(s)	606, 1248, 1473, 1496, 1908, 1916, 2129, 2289, 2301
FspI	TGCGCA	1 cut(s)	1554
GlaI	GCGC	4 cut(s)	10, 150, 156, 1554
HaeII	RGCGCY	3 cut(s)	12, 152, 158
HaeIII	GGCC	4 cut(s)	5, 34, 506, 891
HhaI	GCGC	4 cut(s)	11, 151, 157, 1555
Hin1I	GRCGYC	3 cut(s)	149, 155, 650
Hin1II	CATG	8 cut(s)	39, 983, 994, 1387, 1732, 2137, 2151, 2278
Hin6I	GCGC	4 cut(s)	9, 149, 155, 1553
HinP1I	GCGC	4 cut(s)	9, 149, 155, 1553
HincII	GTYRAC	1 cut(s)	398
HindII	GTYRAC	1 cut(s)	398
HindIII	AAGCTT	2 cut(s)	1241, 1557
HinfI	GANTC	5 cut(s)	442, 1374, 1430, 1504, 2222
HphI	GGTGA	5 cut(s)	949, 979, 2038, 2208, 2217
Hpy166II	GTNNAC	3 cut(s)	398, 463, 970
Hpy8I	GTNNAC	3 cut(s)	398, 463, 970
Hpy99I	CGWCG	2 cut(s)	393, 652
HpyAV	CCTTC	8 cut(s)	529, 593, 668, 880, 1765, 1831, 1927, 2176
HpyCH4III	ACNGT	4 cut(s)	95, 303, 1063, 1482
HpyCH4IV	ACGT	2 cut(s)	650, 2213
HpyF3I	CTNAG	8 cut(s)	65, 315, 1123, 1140, 1568, 1656, 1737, 1818
HpySE526I	ACGT	2 cut(s)	650, 2213
Hsp92I	GRCGYC	3 cut(s)	149, 155, 650
Hsp92II	CATG	8 cut(s)	39, 983, 994, 1387, 1732, 2137, 2151, 2278
HspAI	GCGC	4 cut(s)	9, 149, 155, 1553
KasI	GGCGCC	2 cut(s)	148, 154
KroI	GCCGGC	3 cut(s)	5, 151, 157
KroNI	GCCGGC	3 cut(s)	7, 153, 159
Ksp22I	TGATCA	1 cut(s)	2140
Kzo9I	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
LguI	GCTCTTC	1 cut(s)	1986
LmnI	GCTCC	3 cut(s)	166, 760, 2069
LweI	GCATC	5 cut(s)	1128, 1309, 1445, 1818, 1972
MaeI	CTAG	9 cut(s)	606, 1248, 1473, 1496, 1908, 1916, 2129, 2289, 2301
MaeII	ACGT	2 cut(s)	650, 2213
MaeIII	GTNAC	4 cut(s)	1107, 1718, 2188, 2214
MalI	GATC	5 cut(s)	332, 684, 2089, 2142, 2308
MboI	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
MfeI	CAATTG	2 cut(s)	1152, 1443
MhlI	GDGCHC	2 cut(s)	893, 1736
Mly113I	GGCGCC	2 cut(s)	149, 155
MlyI	GAGTC	3 cut(s)	1368, 1439, 2216
MmeI	TCCRAC	2 cut(s)	164, 1444
Mph1103I	ATGCAT	1 cut(s)	1389
MreI	CGCCGGCG	1 cut(s)	151
MroNI	GCCGGC	3 cut(s)	5, 151, 157
MroXI	GAANNNNTTC	4 cut(s)	527, 1188, 1503, 2296
MseI	TTAA	4 cut(s)	134, 741, 1220, 2118
MslI	CAYNNNNRTG	2 cut(s)	266, 1401
MspA1I	CMGCKG	6 cut(s)	184, 190, 196, 245, 336, 1704
MspR9I	CCNGG	3 cut(s)	146, 893, 894
MunI	CAATTG	2 cut(s)	1152, 1443
Mva1269I	GAATGC	4 cut(s)	985, 1331, 1534, 1555
NaeI	GCCGGC	3 cut(s)	7, 153, 159
NarI	GGCGCC	2 cut(s)	149, 155
NciI	CCSGG	3 cut(s)	146, 893, 894
NcoI	CCATGG	2 cut(s)	35, 990
NdeII	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
NgoMIV	GCCGGC	3 cut(s)	5, 151, 157
NlaIII	CATG	8 cut(s)	39, 983, 994, 1387, 1732, 2137, 2151, 2278
NlaIV	GGNNCC	8 cut(s)	150, 156, 162, 784, 891, 1685, 2240, 2284
NmeAIII	GCCGAG	1 cut(s)	1859
NmuCI	GTSAC	3 cut(s)	1107, 2188, 2214
NsbI	TGCGCA	1 cut(s)	1554
NsiI	ATGCAT	1 cut(s)	1389
NspI	RCATGY	1 cut(s)	2151
NspV	TTCGAA	3 cut(s)	1468, 1579, 1597
OliI	CACNNNNGTG	1 cut(s)	266
PaeI	GCATGC	1 cut(s)	2151
PaeR7I	CTCGAG	1 cut(s)	500
PagI	TCATGA	1 cut(s)	979
PciSI	GCTCTTC	1 cut(s)	1986
PcsI	WCGNNNNNNNCGW	1 cut(s)	385
PctI	GAATGC	4 cut(s)	985, 1331, 1534, 1555
PdiI	GCCGGC	3 cut(s)	7, 153, 159
PdmI	GAANNNNTTC	4 cut(s)	527, 1188, 1503, 2296
PfeI	GAWTC	2 cut(s)	442, 1504
PflMI	CCANNNNNTGG	2 cut(s)	996, 1802
PleI	GAGTC	3 cut(s)	1368, 1438, 2216
PluTI	GGCGCC	2 cut(s)	152, 158
PpsI	GAGTC	3 cut(s)	1368, 1438, 2216
PshBI	ATTAAT	1 cut(s)	741
PsiI	TTATAA	1 cut(s)	1160
Psp124BI	GAGCTC	1 cut(s)	1736
PspN4I	GGNNCC	8 cut(s)	150, 156, 162, 784, 891, 1685, 2240, 2284
PspOMI	GGGCCC	1 cut(s)	889
PspPI	GGNCC	2 cut(s)	889, 890
PspXI	VCTCGAGB	1 cut(s)	500
PstNI	CAGNNNCTG	1 cut(s)	178
RsaI	GTAC	4 cut(s)	85, 297, 1292, 1920
RsaNI	GTAC	4 cut(s)	84, 296, 1291, 1919
RseI	CAYNNNNRTG	2 cut(s)	266, 1401
SacI	GAGCTC	1 cut(s)	1736
SapI	GCTCTTC	1 cut(s)	1986
SaqAI	TTAA	4 cut(s)	134, 741, 1220, 2118
Sau3AI	GATC	5 cut(s)	330, 682, 2087, 2140, 2306
Sau96I	GGNCC	2 cut(s)	889, 890
ScaI	AGTACT	1 cut(s)	1920
SchI	GAGTC	3 cut(s)	1368, 1439, 2216
ScrFI	CCNGG	3 cut(s)	146, 893, 894
SduI	GDGCHC	2 cut(s)	893, 1736
SfaNI	GCATC	5 cut(s)	1128, 1309, 1445, 1818, 1972
SfcI	CTRYAG	2 cut(s)	1436, 1848
SfoI	GGCGCC	2 cut(s)	150, 156
Sfr274I	CTCGAG	1 cut(s)	500
SfuI	TTCGAA	3 cut(s)	1468, 1579, 1597
SgrAI	CRCCGGYG	1 cut(s)	151
SlaI	CTCGAG	1 cut(s)	500
SmaI	CCCGGG	1 cut(s)	894
SmiMI	CAYNNNNRTG	2 cut(s)	266, 1401
SmlI	CTYRAG	4 cut(s)	446, 500, 1508, 1693
SmoI	CTYRAG	4 cut(s)	446, 500, 1508, 1693
SpeI	ACTAGT	1 cut(s)	1915
SphI	GCATGC	1 cut(s)	2151
SspDI	GGCGCC	2 cut(s)	148, 154
SspI	AATATT	2 cut(s)	559, 2057
SspMI	CTAG	9 cut(s)	606, 1248, 1473, 1496, 1908, 1916, 2129, 2289, 2301
SstI	GAGCTC	1 cut(s)	1736
StyD4I	CCNGG	3 cut(s)	144, 891, 892
StyI	CCWWGG	4 cut(s)	35, 930, 990, 2062
TaaI	ACNGT	4 cut(s)	95, 303, 1063, 1482
TaiI	ACGT	2 cut(s)	653, 2216
TatI	WGTACW	2 cut(s)	295, 1918
TfiI	GAWTC	2 cut(s)	442, 1504
Tru1I	TTAA	4 cut(s)	134, 741, 1220, 2118
Tru9I	TTAA	4 cut(s)	134, 741, 1220, 2118
TscAI	CASTG	5 cut(s)	73, 759, 1102, 1803, 2193
TseFI	GTSAC	3 cut(s)	1107, 2188, 2214
Tsp45I	GTSAC	3 cut(s)	1107, 2188, 2214
TspDTI	ATGAA	9 cut(s)	848, 899, 1092, 1311, 1502, 1541, 1616, 1979, 2263
TspGWI	ACGGA	1 cut(s)	2066
TspMI	CCCGGG	1 cut(s)	892
TspRI	CASTG	5 cut(s)	73, 759, 1102, 1803, 2193
Van91I	CCANNNNNTGG	2 cut(s)	996, 1802
VspI	ATTAAT	1 cut(s)	741
XagI	CCTNNNNNAGG	1 cut(s)	1089
XapI	RAATTY	4 cut(s)	1113, 1281, 2033, 2269
XbaI	TCTAGA	1 cut(s)	2288
XceI	RCATGY	1 cut(s)	2151
XcmI	CCANNNNNNNNNTGG	1 cut(s)	265
XhoI	CTCGAG	1 cut(s)	500
XmaI	CCCGGG	1 cut(s)	892
XmnI	GAANNNNTTC	4 cut(s)	527, 1188, 1503, 2296
XspI	CTAG	9 cut(s)	606, 1248, 1473, 1496, 1908, 1916, 2129, 2289, 2301
ZraI	GACGTC	1 cut(s)	651
ZrmI	AGTACT	1 cut(s)	1920
Zsp2I	ATGCAT	1 cut(s)	1389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.