Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0003211

Physical Location & Seq

Genomic Coordinates Forward (+)

2108422 .. 2111007

Gene Structure 2586 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG029600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGAAGTTGCCATTGGAATGTGAAGAACACAAGAAGACACTTAACAAACTTGTGCTTGCTTCTTTTGGGACTTTCCGAAAGCACTTGTCATCTTACTGCTTTTCGGAGAAGTGCCAAATTCAGAGAATGACAACCTCAAATGGAATAATGCTGGCCAAGATCATTGCAGCCACAGCTGCAACTACTCTTGTTATTGCCGGAATCTTCTTCTTCGTCTACAGATTTCTAGCTGCTCGGCGCCACCCAAAAGACAAGAGCAATGGAAGCTTTCGTAGGGAGGAAGTTAGAATGAGTAGTGAAGATCAGCTCAGGCAATGCAGTGGAAATGTGAAGGGGTTGATTGTCGATGAGAATGGTGTGGATGTTATCTACTTGAGGAAACTAGAAGTTGGGCAGGTTCAAACTCATTTTCCCAAGGTAGTTTTCAACCCAAGTTATGAAGACGATGTAGAAGAAGAAGAAAAGAGAGTGGATGCTAAAGGAGAAAGAGCCAAAATGCCCAAGCCTAAAGCGGTTCGTTCTTTTCATAAGCCATCTGATTTGATCAATCATGGAAAATTAGCAAAACCATTCATACAAAATCCAACTCCAGAAGTTGTGCTTTCATTGCCAAAGCTGCAACAGCGGCTTCCTCTAAAATCTCCTGCACCTCCATTTAGGATAACACCACCAAAGATGTTGGAAAAGCAAGCACTAGAATCACTGCCTCCTCTACCACCCCCACCATCAAGTAATATATCTCCACCACCATCAGTTCCTCCACCTCCTCCTCCTCCTCCGCCACCACCCCCTCCACCACCACCACCCCCGCCACCACAGCTGCCTAAGATAGTAAGAAGAAAATCTATACCACCCACTCCACCTAGTCTAGGTGGTTCTTTTTTAGCGCCAAAACCACCACCTACACCTAAAGGCATACCAAACAACAAAAGTAGGGCTGAGGCCTCAGCCAGGGAGAGCTCAAAAGTTAGTGTCATTAGGCAAACGAAGCTGAAGCCATTGCACTGGGACAAGGTTACGGCTGCTGTTGATCATTCCATGGTCTGGGATCAAATTACTGATGGAACATTCAGATTTGATGGTGAGCTTATGGAAAACTTGTTTGGATATAACATCACCAAAAACCAAACCAATGAAAGAAATAACAATTTGTCAGCTTCAGCCAAGTCTAACTCTGTCCCAACAGCTCAAGTTTTCATTCTAGACCCCAGAAAGTCTCAAAACACAGCAATAGTGCTAAAGTCTCTCCCAATCTCTCGTAAAGAAATCATAAATTCTCTTCTTGATGGTCAAGGACTCGGTTCAGAAACACTCGAAAAACTCACCAAAATTTCTCCAACCAAAGAAGAAGAGATCAAGATCCTCCAATTCAATGGCAATCCAAATAAGCTTGCAGATGCTGAGTCTTTCCTCTACCACATCCTCAAAGCTGTCCCTTCGGCATTTACACGATTCAATGCAATGCTTTTCCGGGAAAATTATGACACCGAAATCCTCCACCTCAAGGAGTCACTACAAACACTTGAACTCGGGTGCAAGGAGCTAAGAGCTCGAGGTTTTTTCCTTAAACTTCTTGAAGCGATTCTCAAAGCTGGAAACCAAATGAATGCTGGAACTCCTCGAGGAAATGCACAAGGTTTCAACCTCAGTGCTCTTCTGAATCTATCTGATGTCAAAAGCACTGATGCAAAGACTACTCTGCTTCACTTTGTGGTTGAACAAGTAGCTCAATCGGAGGGTAGAGACTTAGTGATCAATCAGAGAAGCCAAACTAGTACACCAAATTCGGATGATCTGACAGCCGAAGAGAGAAGAAAGGAGTACTTAATCCAAGGGTTACCAAAGTTGGGAGGCTTGAGTATTGAGCTATCTAATGTGAAGAAAGCAGCTACAATAGACTATGACAGCTTCATTCGTGTGAGCTCCACTCTCACTAGCCGTGTAGATGAAATTAGAAAGGTTTTGACACATTGTTGCAATGGTGAGACAGGAGGGTTTGCAAGAGAAATGAAAGGGTTTTTGGAGGAACGTGAGGAGGAGCTTAAGGTTGTGAGAGAAGAGCAGATTAGGGTTATGGAACTTGTGAAGAGAACAACGGAGTATTACCAAGCCAGATCTGCGAAAGACAAAGGAGCTCAACCACTTCAGCTCTTTGTGATTGTTAGAGGTTTTCTAGACATGGTTGATCTTGTTTGTGCAGAAGTTTCAAGAAAGTTACAGAGGAAGAGTACTTCTACAACCAATGTGGGATCAGCATCTCCTCCATTATCAGCATCACCTTCATTGTCACCTACAGTCCTAACACCAAAGAAGTTACAGAACTTCCAGTCACATTTCAATTCACATGTGTCTTGGTCATCTTCCAGTGATTCAGAAGATGATTTCAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005522 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0016049 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0033043 GO:0040007 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0060560 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

797

Amino Acids

88.65

Weight (kDa)

9.43

Isoelectric Point (pI)

48.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	327 - 728	4.9e-99	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24150 AT1G59910 AT1G70140
fragaria_vesca	FvH4_4g35240 FvH4_5g16231
malus_domestica	MD06G1182500.v1.1 MD13G1085100.v1.1 MD14G1188500.v1.1 MD16G1084300.v1.1
prunus_persica	Prupe.1G261700_v2.0.a1 Prupe.5G180600_v2.0.a1
pyrus_communis	pycom06g16140 pycom13g07360
rosa_chinensis	RchiOBHm_Chr4g0444841 RchiOBHm_Chr7g0179861
rosa_laevigata	RLG00000005317 RLG00000005796
rosa_multiflora	Rmu_sc0000096.1_g000028 Rmu_sc0001754.1_g000001 Rmu_sc0006845.1_g000009 Rmu_sc0031375.1_g000001 Rmu_sc0034891.1_g000002 Rmu_sc0034892.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273390 Rroxscaffold_5G00385330
rosa_rugosa	Rorug04G0355500 Rorug06G0428800
rosa_samantha	Rh4AG417000 Rh4BG428800 Rh4CG443600 Rh4DG424800 Rh7AG028700 Rh7BG027900 Rh7CG029600 Rh7DG029000
rosa_wichuraiana	Rw4G035740 Rw7G002300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1620
Acc36I	ACCTGC	1 cut(s)	385
AccB1I	GGYRCC	1 cut(s)	237
AccB7I	CCANNNNNTGG	1 cut(s)	1044
AccI	GTMKAC	1 cut(s)	216
AciI	CCGC	4 cut(s)	512, 625, 779, 809
AclWI	GGATC	3 cut(s)	1056, 1354, 2257
AcoI	YGGCCR	1 cut(s)	153
AcsI	RAATTY	4 cut(s)	117, 1273, 1329, 1783
AcuI	CTGAAG	3 cut(s)	1013, 1143, 2129
AcyI	GRCGYC	1 cut(s)	238
AdeI	CACNNNGTG	1 cut(s)	1711
AfaI	GTAC	3 cut(s)	1777, 1823, 2230
AfiI	CCNNNNNNNGG	5 cut(s)	869, 951, 1044, 1504, 1847
AflII	CTTAAG	1 cut(s)	2042
AflIII	ACRYGT	1 cut(s)	2344
AhlI	ACTAGT	1 cut(s)	1772
AjnI	CCWGG	1 cut(s)	950
AjuI	GAANNNNNNNTTGG	7 cut(s)	28, 407, 439, 1086, 1118, 2003, 2035
Alw21I	GWGCWC	5 cut(s)	962, 1552, 1654, 1925, 2137
Alw26I	GTCTC	4 cut(s)	1221, 1248, 1737, 1979
AlwI	GGATC	3 cut(s)	1056, 1354, 2257
AlwNI	CAGNNNCTG	1 cut(s)	1400
Ama87I	CYCGRG	3 cut(s)	1529, 1551, 1620
AoxI	GGCC	2 cut(s)	153, 942
ApeKI	GCWGC	7 cut(s)	167, 176, 230, 616, 820, 1022, 1886
ApoI	RAATTY	4 cut(s)	117, 1273, 1329, 1783
Asp700I	GAANNNNTTC	1 cut(s)	1581
AspLEI	GCGC	2 cut(s)	240, 889
AsuC2I	CCSGG	1 cut(s)	1472
AsuHPI	GGTGA	6 cut(s)	1094, 1108, 1315, 1994, 2268, 2280
AvaI	CYCGRG	3 cut(s)	1529, 1551, 1620
BalI	TGGCCA	1 cut(s)	155
BanI	GGYRCC	1 cut(s)	237
BanII	GRGCYC	4 cut(s)	962, 1552, 1925, 2137
BbsI	GAAGAC	2 cut(s)	41, 447
Bbv12I	GWGCWC	5 cut(s)	962, 1552, 1654, 1925, 2137
BbvCI	CCTCAGC	2 cut(s)	939, 946
BbvI	GCAGC	7 cut(s)	163, 179, 217, 603, 807, 1009, 1898
BccI	CCATC	6 cut(s)	541, 733, 757, 1055, 1073, 1280
BceAI	ACGGC	2 cut(s)	1035, 1923
BciT130I	CCWGG	1 cut(s)	952
BclI	TGATCA	3 cut(s)	543, 1030, 1752
BcnI	CCSGG	1 cut(s)	1472
BcoDI	GTCTC	4 cut(s)	1221, 1248, 1737, 1979
BcuI	ACTAGT	1 cut(s)	1772
BfaI	CTAG	9 cut(s)	227, 383, 695, 864, 869, 1202, 1773, 1935, 2174
BfmI	CTRYAG	2 cut(s)	217, 2292
BfoI	RGCGCY	2 cut(s)	241, 890
BfrI	CTTAAG	1 cut(s)	2042
BfuAI	ACCTGC	1 cut(s)	385
BglII	AGATCT	1 cut(s)	2114
BisI	GCNGC	8 cut(s)	168, 177, 231, 617, 626, 821, 1023, 1887
BlsI	GCNGC	8 cut(s)	169, 178, 232, 618, 627, 822, 1024, 1888
BmcAI	AGTACT	2 cut(s)	1823, 2230
Bme1390I	CCNGG	2 cut(s)	952, 1472
BmeT110I	CYCGRG	3 cut(s)	1529, 1551, 1620
BmiI	GGNNCC	1 cut(s)	239
BmrFI	CCNGG	2 cut(s)	952, 1472
BmrI	ACTGGG	1 cut(s)	1015
BmsI	GCATC	5 cut(s)	463, 1387, 1675, 2264, 2282
BmuI	ACTGGG	1 cut(s)	1015
BpiI	GAAGAC	2 cut(s)	41, 447
BplI	GAGNNNNNCTC	2 cut(s)	1912, 1944
BpmI	CTGGAG	1 cut(s)	573
Bpu10I	CCTNAGC	3 cut(s)	308, 939, 946
BpuEI	CTTGAG	4 cut(s)	394, 1173, 1487, 1876
BpuMI	CCSGG	1 cut(s)	1472
BsaBI	GATNNNNATC	2 cut(s)	1358, 2254
BsaHI	GRCGYC	1 cut(s)	238
BsaJI	CCNNGG	4 cut(s)	414, 951, 1038, 1831
Bsc4I	CCNNNNNNNGG	5 cut(s)	869, 951, 1044, 1504, 1847
Bse1I	ACTGG	3 cut(s)	1010, 2326, 2364
Bse3DI	GCAATG	7 cut(s)	162, 265, 320, 605, 998, 1467, 1984
Bse8I	GATNNNNATC	2 cut(s)	1358, 2254
BseBI	CCWGG	1 cut(s)	952
BseDI	CCNNGG	4 cut(s)	414, 951, 1038, 1831
BseGI	GGATG	4 cut(s)	367, 478, 1419, 1795
BseJI	GATNNNNATC	2 cut(s)	1358, 2254
BseLI	CCNNNNNNNGG	5 cut(s)	869, 951, 1044, 1504, 1847
BseMI	GCAATG	7 cut(s)	162, 265, 320, 605, 998, 1467, 1984
BseMII	CTCAG	5 cut(s)	322, 930, 960, 1392, 1660
BseNI	ACTGG	3 cut(s)	1010, 2326, 2364
BseRI	GAGGAG	9 cut(s)	699, 756, 759, 762, 765, 1608, 2048, 2051, 2250
BseXI	GCAGC	7 cut(s)	163, 179, 217, 603, 807, 1009, 1898
BsgI	GTGCAG	2 cut(s)	630, 2217
BshFI	GGCC	2 cut(s)	155, 944
BshNI	GGYRCC	1 cut(s)	237
BsiHKAI	GWGCWC	5 cut(s)	962, 1552, 1654, 1925, 2137
BsiHKCI	CYCGRG	3 cut(s)	1529, 1551, 1620
BsiSI	CCGG	2 cut(s)	198, 1471
BslFI	GGGAC	4 cut(s)	82, 1022, 1163, 1418
BslI	CCNNNNNNNGG	5 cut(s)	869, 951, 1044, 1504, 1847
BsmAI	GTCTC	4 cut(s)	1221, 1248, 1737, 1979
BsmFI	GGGAC	4 cut(s)	82, 1022, 1163, 1418
BsmI	GAATGC	1 cut(s)	1612
BsnI	GGCC	2 cut(s)	155, 944
BsoBI	CYCGRG	3 cut(s)	1529, 1551, 1620
Bsp1286I	GDGCHC	5 cut(s)	962, 1552, 1654, 1925, 2137
Bsp19I	CCATGG	1 cut(s)	1038
BspACI	CCGC	4 cut(s)	512, 625, 779, 809
BspANI	GGCC	2 cut(s)	155, 944
BspCNI	CTCAG	5 cut(s)	321, 931, 959, 1393, 1659
BspLI	GGNNCC	1 cut(s)	239
BspMI	ACCTGC	1 cut(s)	385
BspPI	GGATC	3 cut(s)	1056, 1354, 2257
BspQI	GCTCTTC	2 cut(s)	1659, 2052
BspT107I	GGYRCC	1 cut(s)	237
BspTI	CTTAAG	1 cut(s)	2042
BsrDI	GCAATG	7 cut(s)	162, 265, 320, 605, 998, 1467, 1984
BsrI	ACTGG	3 cut(s)	1010, 2326, 2364
BssECI	CCNNGG	4 cut(s)	414, 951, 1038, 1831
BssNI	GRCGYC	1 cut(s)	238
BssT1I	CCWWGG	3 cut(s)	414, 1038, 1831
Bst2UI	CCWGG	1 cut(s)	952
Bst4CI	ACNGT	1 cut(s)	2296
Bst6I	CTCTTC	7 cut(s)	1284, 1344, 1659, 1800, 2052, 2081, 2219
BstACI	GRCGYC	1 cut(s)	238
BstAFI	CTTAAG	1 cut(s)	2042
BstC8I	GCNNGC	4 cut(s)	57, 153, 690, 1392
BstDEI	CTNAG	8 cut(s)	308, 825, 939, 946, 1401, 1544, 1646, 1747
BstDSI	CCRYGG	1 cut(s)	1038
BstEII	GGTNACC	1 cut(s)	1836
BstENI	CCTNNNNNAGG	2 cut(s)	867, 949
BstF5I	GGATG	4 cut(s)	367, 478, 1419, 1795
BstH2I	RGCGCY	2 cut(s)	241, 890
BstHHI	GCGC	2 cut(s)	240, 889
BstMAI	GTCTC	4 cut(s)	1221, 1248, 1737, 1979
BstNI	CCWGG	1 cut(s)	952
BstNSI	RCATGY	1 cut(s)	2348
BstPI	GGTNACC	1 cut(s)	1836
BstSCI	CCNGG	2 cut(s)	950, 1470
BstSFI	CTRYAG	2 cut(s)	217, 2292
BstV1I	GCAGC	7 cut(s)	163, 179, 217, 603, 807, 1009, 1898
BstV2I	GAAGAC	2 cut(s)	41, 447
BstX2I	RGATCY	2 cut(s)	1359, 2114
BstXI	CCANNNNNNTGG	2 cut(s)	1005, 1373
BstYI	RGATCY	2 cut(s)	1359, 2114
BsuRI	GGCC	2 cut(s)	155, 944
BtgI	CCRYGG	1 cut(s)	1038
BtsCI	GGATG	4 cut(s)	367, 478, 1419, 1795
BtsI	GCAGTG	2 cut(s)	325, 701
BtsIMutI	CAGTG	6 cut(s)	325, 701, 1003, 1654, 1680, 2371
BveI	ACCTGC	1 cut(s)	385
Cac8I	GCNNGC	4 cut(s)	57, 153, 690, 1392
CaiI	CAGNNNCTG	1 cut(s)	1400
CfoI	GCGC	2 cut(s)	240, 889
Csp6I	GTAC	3 cut(s)	1776, 1822, 2229
CspCI	CAANNNNNGTGG	2 cut(s)	2226, 2261
CviAII	CATG	4 cut(s)	551, 1039, 2179, 2345
CviQI	GTAC	3 cut(s)	1776, 1822, 2229
DdeI	CTNAG	8 cut(s)	308, 825, 939, 946, 1401, 1544, 1646, 1747
DinI	GGCGCC	1 cut(s)	239
DraIII	CACNNNGTG	1 cut(s)	1711
EaeI	YGGCCR	1 cut(s)	153
Eam1104I	CTCTTC	7 cut(s)	1284, 1344, 1659, 1800, 2052, 2081, 2219
EarI	CTCTTC	7 cut(s)	1284, 1344, 1659, 1800, 2052, 2081, 2219
EciI	GGCGGA	1 cut(s)	768
Ecl136II	GAGCTC	4 cut(s)	960, 1550, 1923, 2135
Eco130I	CCWWGG	3 cut(s)	414, 1038, 1831
Eco147I	AGGCCT	1 cut(s)	944
Eco24I	GRGCYC	4 cut(s)	962, 1552, 1925, 2137
Eco53kI	GAGCTC	4 cut(s)	960, 1550, 1923, 2135
Eco57I	CTGAAG	3 cut(s)	1013, 1143, 2129
Eco88I	CYCGRG	3 cut(s)	1529, 1551, 1620
Eco91I	GGTNACC	1 cut(s)	1836
EcoICRI	GAGCTC	4 cut(s)	960, 1550, 1923, 2135
EcoNI	CCTNNNNNAGG	2 cut(s)	867, 949
EcoO65I	GGTNACC	1 cut(s)	1836
EcoRII	CCWGG	1 cut(s)	950
EcoT14I	CCWWGG	3 cut(s)	414, 1038, 1831
EcoT38I	GRGCYC	4 cut(s)	962, 1552, 1925, 2137
EgeI	GGCGCC	1 cut(s)	239
EheI	GGCGCC	1 cut(s)	239
ErhI	CCWWGG	3 cut(s)	414, 1038, 1831
FaeI	CATG	4 cut(s)	554, 1042, 2182, 2348
FalI	AAGNNNNNCTT	4 cut(s)	585, 617, 1808, 1840
FaqI	GGGAC	4 cut(s)	82, 1022, 1163, 1418
FatI	CATG	4 cut(s)	550, 1038, 2178, 2344
FauI	CCCGC	1 cut(s)	816
FbaI	TGATCA	3 cut(s)	543, 1030, 1752
FblI	GTMKAC	1 cut(s)	216
Fnu4HI	GCNGC	8 cut(s)	168, 177, 231, 617, 626, 821, 1023, 1887
FokI	GGATG	4 cut(s)	374, 485, 1406, 1802
FriOI	GRGCYC	4 cut(s)	962, 1552, 1925, 2137
Fsp4HI	GCNGC	8 cut(s)	168, 177, 231, 617, 626, 821, 1023, 1887
FspBI	CTAG	9 cut(s)	227, 383, 695, 864, 869, 1202, 1773, 1935, 2174
GlaI	GCGC	2 cut(s)	239, 888
GluI	GCNGC	8 cut(s)	168, 177, 231, 617, 626, 821, 1023, 1887
GsuI	CTGGAG	1 cut(s)	573
HaeII	RGCGCY	2 cut(s)	241, 890
HaeIII	GGCC	2 cut(s)	155, 944
HapII	CCGG	2 cut(s)	198, 1471
HhaI	GCGC	2 cut(s)	240, 889
Hin1I	GRCGYC	1 cut(s)	238
Hin1II	CATG	4 cut(s)	554, 1042, 2182, 2348
Hin6I	GCGC	2 cut(s)	238, 887
HinP1I	GCGC	2 cut(s)	238, 887
HindIII	AAGCTT	2 cut(s)	265, 1388
HinfI	GANTC	9 cut(s)	201, 698, 1296, 1403, 1452, 1508, 1582, 1660, 2369
HpaII	CCGG	2 cut(s)	198, 1471
HphI	GGTGA	6 cut(s)	1094, 1108, 1315, 1994, 2268, 2280
Hpy166II	GTNNAC	2 cut(s)	217, 1778
Hpy188III	TCNNGA	7 cut(s)	590, 1202, 1283, 1357, 1574, 2174, 2208
Hpy8I	GTNNAC	2 cut(s)	217, 1778
HpyAV	CCTTC	3 cut(s)	325, 1446, 2289
HpyCH4III	ACNGT	1 cut(s)	2296
HpyCH4IV	ACGT	1 cut(s)	2029
HpyF3I	CTNAG	8 cut(s)	308, 825, 939, 946, 1401, 1544, 1646, 1747
HpySE526I	ACGT	1 cut(s)	2029
Hsp92I	GRCGYC	1 cut(s)	238
Hsp92II	CATG	4 cut(s)	554, 1042, 2182, 2348
HspAI	GCGC	2 cut(s)	238, 887
KasI	GGCGCC	1 cut(s)	237
Ksp22I	TGATCA	3 cut(s)	543, 1030, 1752
LguI	GCTCTTC	2 cut(s)	1659, 2052
LmnI	GCTCC	4 cut(s)	1540, 1928, 2038, 2132
Lsp1109I	GCAGC	7 cut(s)	163, 179, 217, 603, 807, 1009, 1898
LweI	GCATC	5 cut(s)	463, 1387, 1675, 2264, 2282
MaeI	CTAG	9 cut(s)	227, 383, 695, 864, 869, 1202, 1773, 1935, 2174
MaeII	ACGT	1 cut(s)	2029
MaeIII	GTNAC	7 cut(s)	1015, 1509, 1836, 2214, 2286, 2313, 2328
MflI	RGATCY	2 cut(s)	1359, 2114
MhlI	GDGCHC	5 cut(s)	962, 1552, 1654, 1925, 2137
MlsI	TGGCCA	1 cut(s)	155
MluNI	TGGCCA	1 cut(s)	155
Mly113I	GGCGCC	1 cut(s)	238
MlyI	GAGTC	3 cut(s)	1290, 1412, 1517
MmeI	TCCRAC	3 cut(s)	608, 660, 1361
Mox20I	TGGCCA	1 cut(s)	155
MroXI	GAANNNNTTC	1 cut(s)	1581
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	4 cut(s)	42, 1566, 1826, 2043
MslI	CAYNNNNRTG	2 cut(s)	16, 1916
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	3 cut(s)	176, 625, 820
MspCI	CTTAAG	1 cut(s)	2042
MspI	CCGG	2 cut(s)	198, 1471
MspR9I	CCNGG	2 cut(s)	952, 1472
Mva1269I	GAATGC	1 cut(s)	1612
MvaI	CCWGG	1 cut(s)	952
NarI	GGCGCC	1 cut(s)	238
NciI	CCSGG	1 cut(s)	1472
NcoI	CCATGG	1 cut(s)	1038
NlaIII	CATG	4 cut(s)	554, 1042, 2182, 2348
NlaIV	GGNNCC	1 cut(s)	239
NmeAIII	GCCGAG	1 cut(s)	214
NmuCI	GTSAC	3 cut(s)	1509, 2286, 2328
NspI	RCATGY	1 cut(s)	2348
PaeR7I	CTCGAG	2 cut(s)	1551, 1620
PceI	AGGCCT	1 cut(s)	944
PciI	ACATGT	1 cut(s)	2344
PciSI	GCTCTTC	2 cut(s)	1659, 2052
PctI	GAATGC	1 cut(s)	1612
PdmI	GAANNNNTTC	1 cut(s)	1581
PfeI	GAWTC	6 cut(s)	201, 698, 1452, 1582, 1660, 2369
PflMI	CCANNNNNTGG	1 cut(s)	1044
PfoI	TCCNGGA	1 cut(s)	1470
PkrI	GCNGC	8 cut(s)	169, 178, 232, 618, 627, 822, 1024, 1888
PleI	GAGTC	3 cut(s)	1290, 1411, 1516
PluTI	GGCGCC	1 cut(s)	241
PpsI	GAGTC	3 cut(s)	1290, 1411, 1516
PscI	ACATGT	1 cut(s)	2344
Psp124BI	GAGCTC	4 cut(s)	962, 1552, 1925, 2137
Psp6I	CCWGG	1 cut(s)	950
PspEI	GGTNACC	1 cut(s)	1836
PspGI	CCWGG	1 cut(s)	950
PspN4I	GGNNCC	1 cut(s)	239
PspXI	VCTCGAGB	2 cut(s)	1551, 1620
PstNI	CAGNNNCTG	1 cut(s)	1400
PsuI	RGATCY	2 cut(s)	1359, 2114
PvuII	CAGCTG	2 cut(s)	176, 820
RsaI	GTAC	3 cut(s)	1777, 1823, 2230
RsaNI	GTAC	3 cut(s)	1776, 1822, 2229
RseI	CAYNNNNRTG	2 cut(s)	16, 1916
SacI	GAGCTC	4 cut(s)	962, 1552, 1925, 2137
SapI	GCTCTTC	2 cut(s)	1659, 2052
SaqAI	TTAA	4 cut(s)	42, 1566, 1826, 2043
SatI	GCNGC	8 cut(s)	168, 177, 231, 617, 626, 821, 1023, 1887
ScaI	AGTACT	2 cut(s)	1823, 2230
SchI	GAGTC	3 cut(s)	1290, 1412, 1517
ScrFI	CCNGG	2 cut(s)	952, 1472
SduI	GDGCHC	5 cut(s)	962, 1552, 1654, 1925, 2137
SfaNI	GCATC	5 cut(s)	463, 1387, 1675, 2264, 2282
SfcI	CTRYAG	2 cut(s)	217, 2292
SfoI	GGCGCC	1 cut(s)	239
Sfr274I	CTCGAG	2 cut(s)	1551, 1620
SlaI	CTCGAG	2 cut(s)	1551, 1620
SmiMI	CAYNNNNRTG	2 cut(s)	16, 1916
SmlI	CTYRAG	7 cut(s)	373, 1188, 1502, 1551, 1620, 1855, 2042
SmoI	CTYRAG	7 cut(s)	373, 1188, 1502, 1551, 1620, 1855, 2042
SpeI	ACTAGT	1 cut(s)	1772
SseBI	AGGCCT	1 cut(s)	944
SsiI	CCGC	4 cut(s)	512, 625, 779, 809
SspDI	GGCGCC	1 cut(s)	237
SspMI	CTAG	9 cut(s)	227, 383, 695, 864, 869, 1202, 1773, 1935, 2174
SstI	GAGCTC	4 cut(s)	962, 1552, 1925, 2137
StuI	AGGCCT	1 cut(s)	944
StyD4I	CCNGG	2 cut(s)	950, 1470
StyI	CCWWGG	3 cut(s)	414, 1038, 1831
TaaI	ACNGT	1 cut(s)	2296
TaiI	ACGT	1 cut(s)	2032
TaqI	TCGA	4 cut(s)	345, 1314, 1552, 1621
TatI	WGTACW	3 cut(s)	1775, 1821, 2228
TauI	GCSGC	1 cut(s)	628
TfiI	GAWTC	6 cut(s)	201, 698, 1452, 1582, 1660, 2369
Tru1I	TTAA	4 cut(s)	42, 1566, 1826, 2043
Tru9I	TTAA	4 cut(s)	42, 1566, 1826, 2043
TscAI	CASTG	6 cut(s)	325, 708, 1010, 1654, 1687, 2371
TseFI	GTSAC	3 cut(s)	1509, 2286, 2328
TseI	GCWGC	7 cut(s)	167, 176, 230, 616, 820, 1022, 1886
Tsp45I	GTSAC	3 cut(s)	1509, 2286, 2328
TspGWI	ACGGA	1 cut(s)	2111
TspRI	CASTG	6 cut(s)	325, 708, 1010, 1654, 1687, 2371
Van91I	CCANNNNNTGG	1 cut(s)	1044
Vha464I	CTTAAG	1 cut(s)	2042
XagI	CCTNNNNNAGG	2 cut(s)	867, 949
XapI	RAATTY	4 cut(s)	117, 1273, 1329, 1783
XbaI	TCTAGA	2 cut(s)	1201, 2173
XceI	RCATGY	1 cut(s)	2348
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1607
XhoI	CTCGAG	2 cut(s)	1551, 1620
XmiI	GTMKAC	1 cut(s)	216
XmnI	GAANNNNTTC	1 cut(s)	1581
XspI	CTAG	9 cut(s)	227, 383, 695, 864, 869, 1202, 1773, 1935, 2174
ZrmI	AGTACT	2 cut(s)	1823, 2230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.