Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001754.1

Orthogroup ID

OG0003211

Physical Location & Seq

Genomic Coordinates Reverse (-)

278 .. 2624

Gene Structure 2347 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001754.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

atgctggccaagatcattgcagccacggctgcaactactcttgttattgccggaatcttcttcttcgtctacagatttctagctgctcggcgccacccaaaagacaagagcaatggaagctttcgtagggaggaagttagaatgagtagtgaagatcagctcaggcaatgcagtggaaatgtgaaggggttgattgtcgatgagaatggtgtggatgttatctacttgaggaaactagaagttgggcaggttcaaactcattttcccaaggtagttttcaacccaagttatgaagacgatgtagaagaagaagaaaagagagtggatgctaaaggagagagagccaaaatgcccaagcctaaagcggttcgttcttttcataagccatcagctgatttgatcaatcatggaaaattagcaaaaccattcatacaaaatccaactccagaagttgtgctttcattgccaaagctgcaacagcggcttcctctaaaatctcctgcacctccatttaggataacaccaccaaagatgttggaaaagcaagcactagaatcacttcctcctctaccacccccaccatcaagtaatatatctccaccaccatcagttcctccacctcctcctcctccgccaccaccccctccaccaccaccacccccgcccccacagctgcctaagatagtaagaagaaaatctataccacccactcaacctaggctaggtggttcttttttagcgccaaaaccaccacccacacctaaaggcataccaaacaacaaaagtagggctgaggcctcagccggggagagctcaaaagtgagtgtcattaggcaaacgaagctgaagccattgcactgggacaaggttatgactgctgttgatcattccatggtctgggatcaaatcactgatggaacattcagatttgatgatgagcttatggaaaacttgtttggatataacatcaccaaaaaccaaaccaatgaaagaaataacaatttgtcagcttcagccaagtctaactctgccccaacagctcaagttttcattctagaccccaggaagtctcaaaacacagcaatagtgctaaagtctctcccaatctcttgtaaagaaatcataaattctcttcttgatggtcatgggctcggttcagaaacactcgaaaaactcaccaaaatttctccaaccaaagaagaagagatcaagatcctccaattcaatggcaatccaaataagcttgcagatgctgagtctttcctctaccacatcctcaaagctgtcccttcagcatttacacgattcaatgcaatgcttttccgggaaaattatgacaccgaaatcctccacctgaaggagtcaatacaaacacttgaactcgggtgcaaggagctaagagctccaggttttttccttaaacttcttgaagcgattctcaaagctggaaaccgaatgaatgctggaactgctcgaggaaatgcacaaggtttcaaccttagtgctcttctgaagctatctgatgtcaaaagcactgatgcaaagactacactgcttcactttgtggttgaacaagtagctcaattggagggtagagacttagtgaccaatcagagaagccaaactagtacaccaaattcggataatctgacagccgaagagagaagaaaggagtacttaatccaagggttaccaaagttgggaggcttgagtattgagctatctaatgtgaagaaagcagctacaatagactatgacagcttcatttgtatgagctccactctcactagccgtgtagatgaaattagaaaggttttgacacattgttgcaatggtgagacaggagggtttgcaagagaaatgaaagagttttcggaggaatgtgaggaggagcttaaggttgtgagagaagagctgattagggttatggaacttgtgaagagaacaacggagtattaccaagccagagctgcgaaagacaaaggagctcaaccacttcagctctttgtgattgttagaggttttctagacatggttgatcttgtttgtgcagaaatttcaagaaaggtacagaggaagagtacttctacaaccaatgtgggatcagcatcacctccattgtcacctacagtcctaacaccaaagaagttacagaacttccagtcacatttcaattcacatgtgtcttggtcatcttccagtgattcagaagatgatttcagaagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005522 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009932 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0016049 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030838 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0033043 GO:0040007 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0060560 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FH2

Protein Analysis

742

Amino Acids

82.38

Weight (kDa)

9.23

Isoelectric Point (pI)

48.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24150 AT1G59910 AT1G70140
fragaria_vesca	FvH4_4g35240 FvH4_5g16231
malus_domestica	MD06G1182500.v1.1 MD13G1085100.v1.1 MD14G1188500.v1.1 MD16G1084300.v1.1
prunus_persica	Prupe.1G261700_v2.0.a1 Prupe.5G180600_v2.0.a1
pyrus_communis	pycom06g16140 pycom13g07360
rosa_chinensis	RchiOBHm_Chr4g0444841 RchiOBHm_Chr7g0179861
rosa_laevigata	RLG00000005317 RLG00000005796
rosa_multiflora	Rmu_sc0000096.1_g000028 Rmu_sc0001754.1_g000001 Rmu_sc0006845.1_g000009 Rmu_sc0031375.1_g000001 Rmu_sc0034891.1_g000002 Rmu_sc0034892.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273390 Rroxscaffold_5G00385330
rosa_rugosa	Rorug04G0355500 Rorug06G0428800
rosa_samantha	Rh4AG417000 Rh4BG428800 Rh4CG443600 Rh4DG424800 Rh7AG028700 Rh7BG027900 Rh7CG029600 Rh7DG029000
rosa_wichuraiana	Rw4G035740 Rw7G002300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	238
AccB1I	GGYRCC	1 cut(s)	90
AccB7I	CCANNNNNTGG	1 cut(s)	897
AccI	GTMKAC	1 cut(s)	69
AciI	CCGC	4 cut(s)	365, 481, 632, 662
AclWI	GGATC	3 cut(s)	909, 1207, 2110
AcoI	YGGCCR	1 cut(s)	6
AcsI	RAATTY	4 cut(s)	1126, 1182, 1636, 2055
AcuI	CTGAAG	6 cut(s)	866, 996, 1275, 1376, 1532, 1982
AcyI	GRCGYC	1 cut(s)	91
AdeI	CACNNNGTG	1 cut(s)	1564
AfaI	GTAC	4 cut(s)	1630, 1676, 2070, 2083
AfiI	CCNNNNNNNGG	5 cut(s)	722, 804, 897, 1357, 1700
AflII	CTTAAG	1 cut(s)	1895
AflIII	ACRYGT	1 cut(s)	2179
AhlI	ACTAGT	1 cut(s)	1625
AjnI	CCWGG	2 cut(s)	1061, 1405
AjuI	GAANNNNNNNTTGG	4 cut(s)	260, 292, 939, 971
Alw21I	GWGCWC	5 cut(s)	815, 1405, 1507, 1778, 1990
Alw26I	GTCTC	4 cut(s)	1074, 1101, 1590, 1832
AlwI	GGATC	3 cut(s)	909, 1207, 2110
AlwNI	CAGNNNCTG	1 cut(s)	1253
Ama87I	CYCGRG	2 cut(s)	1382, 1473
AoxI	GGCC	2 cut(s)	6, 795
ApeKI	GCWGC	7 cut(s)	20, 29, 83, 472, 673, 1739, 1970
ApoI	RAATTY	4 cut(s)	1126, 1182, 1636, 2055
Asp700I	GAANNNNTTC	2 cut(s)	558, 1434
AspA2I	CCTAGG	1 cut(s)	716
AspLEI	GCGC	2 cut(s)	93, 742
AsuC2I	CCSGG	2 cut(s)	805, 1325
AsuHPI	GGTGA	5 cut(s)	961, 1168, 1847, 2103, 2115
AvaI	CYCGRG	2 cut(s)	1382, 1473
AvrII	CCTAGG	1 cut(s)	716
BalI	TGGCCA	1 cut(s)	8
BanI	GGYRCC	1 cut(s)	90
BanII	GRGCYC	5 cut(s)	815, 1152, 1405, 1778, 1990
BbsI	GAAGAC	1 cut(s)	300
Bbv12I	GWGCWC	5 cut(s)	815, 1405, 1507, 1778, 1990
BbvCI	CCTCAGC	2 cut(s)	792, 799
BbvI	GCAGC	7 cut(s)	16, 32, 70, 459, 660, 1751, 1957
BccI	CCATC	5 cut(s)	394, 589, 613, 908, 1133
BceAI	ACGGC	2 cut(s)	42, 1776
BciT130I	CCWGG	2 cut(s)	1063, 1407
BclI	TGATCA	2 cut(s)	399, 883
BcnI	CCSGG	2 cut(s)	805, 1325
BcoDI	GTCTC	4 cut(s)	1074, 1101, 1590, 1832
BcuI	ACTAGT	1 cut(s)	1625
BfaI	CTAG	9 cut(s)	80, 236, 551, 717, 722, 1055, 1626, 1788, 2027
BfmI	CTRYAG	2 cut(s)	70, 2127
BfoI	RGCGCY	2 cut(s)	94, 743
BfrI	CTTAAG	1 cut(s)	1895
BfuAI	ACCTGC	1 cut(s)	238
BisI	GCNGC	8 cut(s)	21, 30, 84, 473, 482, 674, 1740, 1971
BlnI	CCTAGG	1 cut(s)	716
BlsI	GCNGC	8 cut(s)	22, 31, 85, 474, 483, 675, 1741, 1972
BmcAI	AGTACT	2 cut(s)	1676, 2083
Bme1390I	CCNGG	4 cut(s)	805, 1063, 1325, 1407
BmeT110I	CYCGRG	2 cut(s)	1382, 1473
BmiI	GGNNCC	1 cut(s)	92
BmrFI	CCNGG	4 cut(s)	805, 1063, 1325, 1407
BmrI	ACTGGG	1 cut(s)	868
BmsI	GCATC	4 cut(s)	316, 1240, 1528, 2117
BmuI	ACTGGG	1 cut(s)	868
BpiI	GAAGAC	1 cut(s)	300
BplI	GAGNNNNNCTC	2 cut(s)	1765, 1797
BpmI	CTGGAG	2 cut(s)	429, 1389
Bpu10I	CCTNAGC	3 cut(s)	161, 792, 799
BpuEI	CTTGAG	3 cut(s)	247, 1026, 1729
BpuMI	CCSGG	2 cut(s)	805, 1325
BsaBI	GATNNNNATC	2 cut(s)	1211, 2107
BsaHI	GRCGYC	1 cut(s)	91
BsaJI	CCNNGG	7 cut(s)	24, 267, 716, 804, 891, 1061, 1684
Bsc4I	CCNNNNNNNGG	5 cut(s)	722, 804, 897, 1357, 1700
Bse1I	ACTGG	3 cut(s)	863, 2161, 2199
Bse3DI	GCAATG	7 cut(s)	15, 118, 173, 461, 851, 1320, 1837
Bse8I	GATNNNNATC	2 cut(s)	1211, 2107
BseBI	CCWGG	2 cut(s)	1063, 1407
BseDI	CCNNGG	7 cut(s)	24, 267, 716, 804, 891, 1061, 1684
BseGI	GGATG	3 cut(s)	220, 331, 1272
BseJI	GATNNNNATC	2 cut(s)	1211, 2107
BseLI	CCNNNNNNNGG	5 cut(s)	722, 804, 897, 1357, 1700
BseMI	GCAATG	7 cut(s)	15, 118, 173, 461, 851, 1320, 1837
BseMII	CTCAG	4 cut(s)	175, 783, 813, 1245
BseNI	ACTGG	3 cut(s)	863, 2161, 2199
BseRI	GAGGAG	6 cut(s)	555, 612, 615, 618, 1901, 1904
BseXI	GCAGC	7 cut(s)	16, 32, 70, 459, 660, 1751, 1957
BsgI	GTGCAG	2 cut(s)	486, 2070
BshFI	GGCC	2 cut(s)	8, 797
BshNI	GGYRCC	1 cut(s)	90
BsiHKAI	GWGCWC	5 cut(s)	815, 1405, 1507, 1778, 1990
BsiHKCI	CYCGRG	2 cut(s)	1382, 1473
BsiSI	CCGG	3 cut(s)	51, 804, 1324
BslFI	GGGAC	2 cut(s)	875, 1271
BslI	CCNNNNNNNGG	5 cut(s)	722, 804, 897, 1357, 1700
BsmAI	GTCTC	4 cut(s)	1074, 1101, 1590, 1832
BsmFI	GGGAC	2 cut(s)	875, 1271
BsmI	GAATGC	1 cut(s)	1465
BsnI	GGCC	2 cut(s)	8, 797
BsoBI	CYCGRG	2 cut(s)	1382, 1473
Bsp1286I	GDGCHC	6 cut(s)	815, 1152, 1405, 1507, 1778, 1990
Bsp143I	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
Bsp19I	CCATGG	1 cut(s)	891
BspACI	CCGC	4 cut(s)	365, 481, 632, 662
BspANI	GGCC	2 cut(s)	8, 797
BspCNI	CTCAG	4 cut(s)	174, 784, 812, 1246
BspLI	GGNNCC	1 cut(s)	92
BspMI	ACCTGC	1 cut(s)	238
BspPI	GGATC	3 cut(s)	909, 1207, 2110
BspQI	GCTCTTC	2 cut(s)	1512, 1905
BspT107I	GGYRCC	1 cut(s)	90
BspTI	CTTAAG	1 cut(s)	1895
BsrDI	GCAATG	7 cut(s)	15, 118, 173, 461, 851, 1320, 1837
BsrI	ACTGG	3 cut(s)	863, 2161, 2199
BssECI	CCNNGG	7 cut(s)	24, 267, 716, 804, 891, 1061, 1684
BssMI	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
BssNI	GRCGYC	1 cut(s)	91
BssT1I	CCWWGG	4 cut(s)	267, 716, 891, 1684
Bst2UI	CCWGG	2 cut(s)	1063, 1407
Bst4CI	ACNGT	1 cut(s)	2131
Bst6I	CTCTTC	7 cut(s)	1137, 1197, 1512, 1653, 1905, 1934, 2072
BstACI	GRCGYC	1 cut(s)	91
BstAFI	CTTAAG	1 cut(s)	1895
BstC8I	GCNNGC	3 cut(s)	6, 546, 1245
BstDEI	CTNAG	8 cut(s)	161, 678, 792, 799, 1254, 1397, 1499, 1600
BstDSI	CCRYGG	2 cut(s)	24, 891
BstEII	GGTNACC	1 cut(s)	1689
BstENI	CCTNNNNNAGG	1 cut(s)	720
BstF5I	GGATG	3 cut(s)	220, 331, 1272
BstH2I	RGCGCY	2 cut(s)	94, 743
BstHHI	GCGC	2 cut(s)	93, 742
BstKTI	GATC	9 cut(s)	15, 157, 402, 886, 904, 1209, 1215, 2041, 2105
BstMAI	GTCTC	4 cut(s)	1074, 1101, 1590, 1832
BstMBI	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
BstNI	CCWGG	2 cut(s)	1063, 1407
BstNSI	RCATGY	1 cut(s)	2183
BstPI	GGTNACC	1 cut(s)	1689
BstSCI	CCNGG	4 cut(s)	803, 1061, 1323, 1405
BstSFI	CTRYAG	2 cut(s)	70, 2127
BstV1I	GCAGC	7 cut(s)	16, 32, 70, 459, 660, 1751, 1957
BstV2I	GAAGAC	1 cut(s)	300
BstX2I	RGATCY	1 cut(s)	1212
BstXI	CCANNNNNNTGG	2 cut(s)	858, 1226
BstYI	RGATCY	1 cut(s)	1212
BsuRI	GGCC	2 cut(s)	8, 797
BtgI	CCRYGG	2 cut(s)	24, 891
BtsCI	GGATG	3 cut(s)	220, 331, 1272
BtsI	GCAGTG	2 cut(s)	178, 1550
BtsIMutI	CAGTG	6 cut(s)	178, 856, 909, 1533, 1550, 2206
BveI	ACCTGC	1 cut(s)	238
Cac8I	GCNNGC	3 cut(s)	6, 546, 1245
CaiI	CAGNNNCTG	1 cut(s)	1253
CfoI	GCGC	2 cut(s)	93, 742
Csp6I	GTAC	4 cut(s)	1629, 1675, 2069, 2082
CspCI	CAANNNNNGTGG	2 cut(s)	2079, 2114
CviAII	CATG	5 cut(s)	407, 892, 1145, 2032, 2180
CviQI	GTAC	4 cut(s)	1629, 1675, 2069, 2082
DdeI	CTNAG	8 cut(s)	161, 678, 792, 799, 1254, 1397, 1499, 1600
DinI	GGCGCC	1 cut(s)	92
DpnI	GATC	9 cut(s)	14, 156, 401, 885, 903, 1208, 1214, 2040, 2104
DpnII	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
DraIII	CACNNNGTG	1 cut(s)	1564
EaeI	YGGCCR	1 cut(s)	6
Eam1104I	CTCTTC	7 cut(s)	1137, 1197, 1512, 1653, 1905, 1934, 2072
EarI	CTCTTC	7 cut(s)	1137, 1197, 1512, 1653, 1905, 1934, 2072
EciI	GGCGGA	1 cut(s)	621
Ecl136II	GAGCTC	4 cut(s)	813, 1403, 1776, 1988
Eco130I	CCWWGG	4 cut(s)	267, 716, 891, 1684
Eco147I	AGGCCT	1 cut(s)	797
Eco24I	GRGCYC	5 cut(s)	815, 1152, 1405, 1778, 1990
Eco53kI	GAGCTC	4 cut(s)	813, 1403, 1776, 1988
Eco57I	CTGAAG	6 cut(s)	866, 996, 1275, 1376, 1532, 1982
Eco88I	CYCGRG	2 cut(s)	1382, 1473
Eco91I	GGTNACC	1 cut(s)	1689
EcoICRI	GAGCTC	4 cut(s)	813, 1403, 1776, 1988
EcoNI	CCTNNNNNAGG	1 cut(s)	720
EcoO65I	GGTNACC	1 cut(s)	1689
EcoRII	CCWGG	2 cut(s)	1061, 1405
EcoT14I	CCWWGG	4 cut(s)	267, 716, 891, 1684
EcoT38I	GRGCYC	5 cut(s)	815, 1152, 1405, 1778, 1990
EgeI	GGCGCC	1 cut(s)	92
EheI	GGCGCC	1 cut(s)	92
ErhI	CCWWGG	4 cut(s)	267, 716, 891, 1684
FaeI	CATG	5 cut(s)	410, 895, 1148, 2035, 2183
FalI	AAGNNNNNCTT	4 cut(s)	441, 473, 1661, 1693
FaqI	GGGAC	2 cut(s)	875, 1271
FatI	CATG	5 cut(s)	406, 891, 1144, 2031, 2179
FauI	CCCGC	1 cut(s)	669
FbaI	TGATCA	2 cut(s)	399, 883
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	8 cut(s)	21, 30, 84, 473, 482, 674, 1740, 1971
FokI	GGATG	3 cut(s)	227, 338, 1259
FriOI	GRGCYC	5 cut(s)	815, 1152, 1405, 1778, 1990
Fsp4HI	GCNGC	8 cut(s)	21, 30, 84, 473, 482, 674, 1740, 1971
FspBI	CTAG	9 cut(s)	80, 236, 551, 717, 722, 1055, 1626, 1788, 2027
GlaI	GCGC	2 cut(s)	92, 741
GluI	GCNGC	8 cut(s)	21, 30, 84, 473, 482, 674, 1740, 1971
GsuI	CTGGAG	2 cut(s)	429, 1389
HaeII	RGCGCY	2 cut(s)	94, 743
HaeIII	GGCC	2 cut(s)	8, 797
HapII	CCGG	3 cut(s)	51, 804, 1324
HhaI	GCGC	2 cut(s)	93, 742
Hin1I	GRCGYC	1 cut(s)	91
Hin1II	CATG	5 cut(s)	410, 895, 1148, 2035, 2183
Hin6I	GCGC	2 cut(s)	91, 740
HinP1I	GCGC	2 cut(s)	91, 740
HindIII	AAGCTT	2 cut(s)	118, 1241
HinfI	GANTC	7 cut(s)	54, 554, 1256, 1305, 1361, 1435, 2204
HpaII	CCGG	3 cut(s)	51, 804, 1324
HphI	GGTGA	5 cut(s)	961, 1168, 1847, 2103, 2115
Hpy166II	GTNNAC	2 cut(s)	70, 1631
Hpy188III	TCNNGA	7 cut(s)	446, 1055, 1136, 1210, 1427, 2027, 2061
Hpy8I	GTNNAC	2 cut(s)	70, 1631
HpyAV	CCTTC	3 cut(s)	178, 1299, 1351
HpyCH4III	ACNGT	1 cut(s)	2131
HpyF3I	CTNAG	8 cut(s)	161, 678, 792, 799, 1254, 1397, 1499, 1600
Hsp92I	GRCGYC	1 cut(s)	91
Hsp92II	CATG	5 cut(s)	410, 895, 1148, 2035, 2183
HspAI	GCGC	2 cut(s)	91, 740
KasI	GGCGCC	1 cut(s)	90
Ksp22I	TGATCA	2 cut(s)	399, 883
Kzo9I	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
LguI	GCTCTTC	2 cut(s)	1512, 1905
LmnI	GCTCC	5 cut(s)	1393, 1408, 1781, 1891, 1985
Lsp1109I	GCAGC	7 cut(s)	16, 32, 70, 459, 660, 1751, 1957
LweI	GCATC	4 cut(s)	316, 1240, 1528, 2117
MaeI	CTAG	9 cut(s)	80, 236, 551, 717, 722, 1055, 1626, 1788, 2027
MaeIII	GTNAC	5 cut(s)	1603, 1689, 2121, 2148, 2163
MalI	GATC	9 cut(s)	14, 156, 401, 885, 903, 1208, 1214, 2040, 2104
MboI	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
MfeI	CAATTG	1 cut(s)	1583
MflI	RGATCY	1 cut(s)	1212
MhlI	GDGCHC	6 cut(s)	815, 1152, 1405, 1507, 1778, 1990
MlsI	TGGCCA	1 cut(s)	8
MluNI	TGGCCA	1 cut(s)	8
Mly113I	GGCGCC	1 cut(s)	91
MlyI	GAGTC	2 cut(s)	1265, 1370
MmeI	TCCRAC	3 cut(s)	464, 516, 1214
Mox20I	TGGCCA	1 cut(s)	8
MroXI	GAANNNNTTC	2 cut(s)	558, 1434
MscI	TGGCCA	1 cut(s)	8
MseI	TTAA	3 cut(s)	1419, 1679, 1896
MslI	CAYNNNNRTG	1 cut(s)	1769
Msp20I	TGGCCA	1 cut(s)	8
MspA1I	CMGCKG	3 cut(s)	392, 481, 673
MspCI	CTTAAG	1 cut(s)	1895
MspI	CCGG	3 cut(s)	51, 804, 1324
MspR9I	CCNGG	4 cut(s)	805, 1063, 1325, 1407
MunI	CAATTG	1 cut(s)	1583
Mva1269I	GAATGC	1 cut(s)	1465
MvaI	CCWGG	2 cut(s)	1063, 1407
NarI	GGCGCC	1 cut(s)	91
NciI	CCSGG	2 cut(s)	805, 1325
NcoI	CCATGG	1 cut(s)	891
NdeII	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
NlaIII	CATG	5 cut(s)	410, 895, 1148, 2035, 2183
NlaIV	GGNNCC	1 cut(s)	92
NmeAIII	GCCGAG	1 cut(s)	67
NmuCI	GTSAC	3 cut(s)	1603, 2121, 2163
NspI	RCATGY	1 cut(s)	2183
PaeR7I	CTCGAG	1 cut(s)	1473
PceI	AGGCCT	1 cut(s)	797
PciI	ACATGT	1 cut(s)	2179
PciSI	GCTCTTC	2 cut(s)	1512, 1905
PctI	GAATGC	1 cut(s)	1465
PdmI	GAANNNNTTC	2 cut(s)	558, 1434
PfeI	GAWTC	5 cut(s)	54, 554, 1305, 1435, 2204
PflMI	CCANNNNNTGG	1 cut(s)	897
PfoI	TCCNGGA	1 cut(s)	1323
PkrI	GCNGC	8 cut(s)	22, 31, 85, 474, 483, 675, 1741, 1972
PleI	GAGTC	2 cut(s)	1264, 1369
PluTI	GGCGCC	1 cut(s)	94
PpsI	GAGTC	2 cut(s)	1264, 1369
PscI	ACATGT	1 cut(s)	2179
Psp124BI	GAGCTC	4 cut(s)	815, 1405, 1778, 1990
Psp6I	CCWGG	2 cut(s)	1061, 1405
PspEI	GGTNACC	1 cut(s)	1689
PspGI	CCWGG	2 cut(s)	1061, 1405
PspN4I	GGNNCC	1 cut(s)	92
PspXI	VCTCGAGB	1 cut(s)	1473
PstNI	CAGNNNCTG	1 cut(s)	1253
PsuI	RGATCY	1 cut(s)	1212
PvuII	CAGCTG	2 cut(s)	392, 673
RsaI	GTAC	4 cut(s)	1630, 1676, 2070, 2083
RsaNI	GTAC	4 cut(s)	1629, 1675, 2069, 2082
RseI	CAYNNNNRTG	1 cut(s)	1769
SacI	GAGCTC	4 cut(s)	815, 1405, 1778, 1990
SapI	GCTCTTC	2 cut(s)	1512, 1905
SaqAI	TTAA	3 cut(s)	1419, 1679, 1896
SatI	GCNGC	8 cut(s)	21, 30, 84, 473, 482, 674, 1740, 1971
Sau3AI	GATC	9 cut(s)	12, 154, 399, 883, 901, 1206, 1212, 2038, 2102
ScaI	AGTACT	2 cut(s)	1676, 2083
SchI	GAGTC	2 cut(s)	1265, 1370
ScrFI	CCNGG	4 cut(s)	805, 1063, 1325, 1407
SduI	GDGCHC	6 cut(s)	815, 1152, 1405, 1507, 1778, 1990
SfaNI	GCATC	4 cut(s)	316, 1240, 1528, 2117
SfcI	CTRYAG	2 cut(s)	70, 2127
SfoI	GGCGCC	1 cut(s)	92
Sfr274I	CTCGAG	1 cut(s)	1473
SlaI	CTCGAG	1 cut(s)	1473
SmiMI	CAYNNNNRTG	1 cut(s)	1769
SmlI	CTYRAG	5 cut(s)	226, 1041, 1473, 1708, 1895
SmoI	CTYRAG	5 cut(s)	226, 1041, 1473, 1708, 1895
SpeI	ACTAGT	1 cut(s)	1625
SseBI	AGGCCT	1 cut(s)	797
SsiI	CCGC	4 cut(s)	365, 481, 632, 662
SspDI	GGCGCC	1 cut(s)	90
SspMI	CTAG	9 cut(s)	80, 236, 551, 717, 722, 1055, 1626, 1788, 2027
SstI	GAGCTC	4 cut(s)	815, 1405, 1778, 1990
StuI	AGGCCT	1 cut(s)	797
StyD4I	CCNGG	4 cut(s)	803, 1061, 1323, 1405
StyI	CCWWGG	4 cut(s)	267, 716, 891, 1684
TaaI	ACNGT	1 cut(s)	2131
TaqI	TCGA	3 cut(s)	198, 1167, 1474
TatI	WGTACW	3 cut(s)	1628, 1674, 2081
TauI	GCSGC	1 cut(s)	484
TfiI	GAWTC	5 cut(s)	54, 554, 1305, 1435, 2204
Tru1I	TTAA	3 cut(s)	1419, 1679, 1896
Tru9I	TTAA	3 cut(s)	1419, 1679, 1896
TscAI	CASTG	6 cut(s)	178, 863, 916, 1540, 1557, 2206
TseFI	GTSAC	3 cut(s)	1603, 2121, 2163
TseI	GCWGC	7 cut(s)	20, 29, 83, 472, 673, 1739, 1970
Tsp45I	GTSAC	3 cut(s)	1603, 2121, 2163
TspGWI	ACGGA	1 cut(s)	1964
TspRI	CASTG	6 cut(s)	178, 863, 916, 1540, 1557, 2206
Van91I	CCANNNNNTGG	1 cut(s)	897
Vha464I	CTTAAG	1 cut(s)	1895
XagI	CCTNNNNNAGG	1 cut(s)	720
XapI	RAATTY	4 cut(s)	1126, 1182, 1636, 2055
XbaI	TCTAGA	2 cut(s)	1054, 2026
XceI	RCATGY	1 cut(s)	2183
XhoI	CTCGAG	1 cut(s)	1473
XmaJI	CCTAGG	1 cut(s)	716
XmiI	GTMKAC	1 cut(s)	69
XmnI	GAANNNNTTC	2 cut(s)	558, 1434
XspI	CTAG	9 cut(s)	80, 236, 551, 717, 722, 1055, 1626, 1788, 2027
ZrmI	AGTACT	2 cut(s)	1676, 2083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.