Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005764

Physical Location & Seq

Genomic Coordinates Forward (+)

1937877 .. 1940577

Gene Structure 2701 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG028000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGATAGTGAAACACTTGTTAAGAGTGAGGAGCTCATCAAGAAAAGTTGCAGCCTTTCATGGAAGAAGGATCAGTTCAGTAATGGGCTGTTTCATGTTGACAAGAGCTCATCGGATGCGGTGTTCATCGTCTTCCCCGGATCATGGACGGTCAAAGAGTGGTTTTCCGACCAAGCTTTTGGAGAAACAAAGATCGATAGTAAAGATTGGTCCAAAAAAGCCTTTCCTTCTATGAGAAGTATTGGTAATGATGAAGTTGCAATTGTCAACCAAGCTTTTCTGGAAAGGTTTGAACTTGTATTGAAGGACTCCAAGTTTCTAGAAGAGGTGAAATTGGCCGTGGACGGGAATAAGCAGGTAATATTTACAGGGCATTCTTCTGGTGGCGCAGTTGCTGTGCTTGCTACAATCTGGTTCTTAGAGCAGAATTCGAAAGCAAACACTGGAACAGCCAAATGTGTGACTTTTGGATCTCCGCTTGTTGGTGACTTCATTGTTTCTCATGCTCTTAAGAGAGAGAAGTGGTCTCAACACTTCATACATTTTGTCATGAGATATGACATTGTTCCTCGGATTTTGCTTGCTCCTCTCTCATCCATTCAGCAAGAATTAGAGCATGTCCTCCATTACTTCACTGAAAATGGTGACCATTATCCACGTGAGTCAATTGACTTTTATACAAATGTAATGAGGAATACCTCTGCTCTCGCAAGCCATGCTGCCTGCAAACTGATGGGGAATACTAATTTGCTGCTCGAGACCTTAACCAACTTCACCAAACTAAGCCCTTATAGACCTTTTGGGACTTACATTTTCTGCACTGGGAATGGGAAGCTGGTTCACTTGGACAACCCTGAAGCTGTGCTGCAACTCCTTTTCTTCTCTTGTCAGTTAAGCCATGAAAACGAAATGGAAGCAACAGCTACGAGCTGCATAAAGGCGCACTTGGACTACAAAACTGAAGTGTTGGGAAGGAGCTTGAAAGAGAATGTGGTTTATGTTGATCGATTGGAAGAGCTCCCCCTAGCCTCAGATGGTAGTAGTGCCTTGGATGACCTTGGCCTGAGTACAAGAGGTCGATTGTGCCTTCGTGCAGCGGGAGAGTTGGAGAAACAAAAACAAAGAAACAAAGAGCAGATTGCAAGAAAGAAGGCAGAAATGGAAGAGGGAATGAAAGGACTAGAAGAGTACAGAAGCTTCAATGCGCAGAAAGTGGGATATTACGACGCCTTCAAGAAACAGGATGATAAGAGAGACTTTGATGCCAATGTGAGGAGGCTGGTGCTGGCAGGTATATGGGATGAGATCATCGAAATGTTGAAGAGGTACGATCTTCCTGACGAGTTCGAAGGTGATGATGGTTGGATAGAGCTAGGAACCAATTTCCGGCGCCTTGTTGAGCCCCTTGATATTGCTAACTACTACAGACACGCAAAGAACGAAGACACTGGAGCCTATATGGTTAAGGGAAGGCCAAGGCGCTACAGATACCCACAGAGATGGCTTGAAAAGCAGAAAGATTTGAAGAGGGATAGCTGTGGAGAATCTTGCTTTTGGGCAGAGGTGGAGGAGTTGCTCAAACTAGCTAGTAATGGTGGTAAAGTTGACGAGGCAAGGGCTAAAAAACTACAGGAAGGAGTAGCAAAATGGATCGAGGAGGGAGTGGCACGTGAGGATGTGCTCTTGGGAGACTCTACCTTCCTCAAATTGTGGGAGGAACTCGGCCGTCTGAAACTCCAGCAGGAATGCATTGGGGCATTGTTGACCAAGTTTCCCCAGTTATCAATTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001666 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007584 GO:0008150 GO:0008219 GO:0009605 GO:0009607 GO:0009626 GO:0009627 GO:0009628 GO:0009653 GO:0009814 GO:0009987 GO:0009991 GO:0010035 GO:0010310 GO:0010618 GO:0010941 GO:0010942 GO:0012501 GO:0016298 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031667 GO:0032502 GO:0033554 GO:0034050 GO:0036293 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045087 GO:0046983 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070482 GO:0098542 GO:1901700 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

597

Amino Acids

68.09

Weight (kDa)

5.93

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase_3	PF01764	43 - 193	1.8e-21	Lipase (class 3)
EDS1_EP	PF18117	394 - 577	8.8e-51	Enhanced disease susceptibility 1 protein EP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48080 AT3G48090 AT3G48090
fragaria_vesca	FvH4_5g16230 FvH4_5g16230
malus_domestica	MD06G1182600.v1.1 MD06G1182800.v1.1 MD14G1188600.v1.1 MD14G1188700.v1.1
prunus_persica	Prupe.5G180700_v2.0.a1 Prupe.5G180900_v2.0.a1 Prupe.5G181000_v2.0.a1
pyrus_communis	pycom06g16150 pycom06g16180 pycom14g15630 pycom14g15640
rosa_chinensis	RchiOBHm_Chr2g0170571 RchiOBHm_Chr7g0179871
rosa_laevigata	RLG00000005316
rosa_multiflora	Rmu_sc0012773.1_g000001 Rmu_sc0016092.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273380
rosa_rugosa	Rorug06G0428800
rosa_samantha	Rh7AG028900 Rh7BG028000 Rh7CG029800 Rh7DG029200
rosa_wichuraiana	Rw7G002310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1206
Acc36I	ACCTGC	2 cut(s)	346, 1280
AccB1I	GGYRCC	1 cut(s)	1389
AciI	CCGC	3 cut(s)	119, 476, 1097
AclWI	GGATC	4 cut(s)	78, 148, 478, 1658
AcoI	YGGCCR	2 cut(s)	336, 1723
AcsI	RAATTY	1 cut(s)	427
AcuI	CTGAAG	2 cut(s)	876, 981
AcvI	CACGTG	2 cut(s)	659, 1670
AcyI	GRCGYC	2 cut(s)	1227, 1390
AfaI	GTAC	3 cut(s)	1069, 1190, 1328
AfiI	CCNNNNNNNGG	5 cut(s)	144, 345, 482, 1272, 1386
AflII	CTTAAG	1 cut(s)	509
AgsI	TTSAA	8 cut(s)	293, 304, 982, 1201, 1234, 1321, 1508, 1525
AloI	GAACNNNNNNTCC	2 cut(s)	107, 139
Alw21I	GWGCWC	4 cut(s)	36, 110, 1020, 1683
Alw26I	GTCTC	4 cut(s)	531, 752, 1248, 1683
AlwI	GGATC	4 cut(s)	78, 148, 478, 1658
AlwNI	CAGNNNCTG	1 cut(s)	395
Ama87I	CYCGRG	1 cut(s)	755
AoxI	GGCC	4 cut(s)	336, 1060, 1472, 1723
ApeKI	GCWGC	6 cut(s)	51, 719, 751, 865, 930, 1094
ApoI	RAATTY	1 cut(s)	427
ArsI	GACNNNNNNTTYG	2 cut(s)	161, 193
AspLEI	GCGC	5 cut(s)	389, 943, 1207, 1392, 1482
AspS9I	GGNCC	1 cut(s)	210
AsuC2I	CCSGG	1 cut(s)	138
AsuHPI	GGTGA	5 cut(s)	340, 497, 656, 766, 1364
AsuII	TTCGAA	2 cut(s)	431, 1347
AvaI	CYCGRG	1 cut(s)	755
AvaII	GGWCC	1 cut(s)	210
BanI	GGYRCC	1 cut(s)	1389
BanII	GRGCYC	4 cut(s)	36, 110, 1020, 1404
BarI	GAAGNNNNNNTAC	2 cut(s)	1181, 1213
BbrPI	CACGTG	2 cut(s)	659, 1670
BbsI	GAAGAC	2 cut(s)	124, 1449
Bbv12I	GWGCWC	4 cut(s)	36, 110, 1020, 1683
BbvI	GCAGC	6 cut(s)	63, 706, 738, 852, 917, 1106
BccI	CCATC	4 cut(s)	727, 1028, 1352, 1494
BceAI	ACGGC	2 cut(s)	323, 1710
BcnI	CCSGG	1 cut(s)	138
BcoDI	GTCTC	4 cut(s)	531, 752, 1248, 1683
BfaI	CTAG	6 cut(s)	320, 1025, 1181, 1373, 1583, 1587
BfmI	CTRYAG	3 cut(s)	1423, 1483, 1628
BfoI	RGCGCY	2 cut(s)	1393, 1483
BfrI	CTTAAG	1 cut(s)	509
BfuAI	ACCTGC	2 cut(s)	346, 1280
BisI	GCNGC	6 cut(s)	52, 720, 752, 866, 931, 1095
BlsI	GCNGC	6 cut(s)	53, 721, 753, 867, 932, 1096
Bme1390I	CCNGG	1 cut(s)	138
Bme18I	GGWCC	1 cut(s)	210
BmeT110I	CYCGRG	1 cut(s)	755
BmgT120I	GGNCC	1 cut(s)	210
BmiI	GGNNCC	3 cut(s)	1378, 1391, 1453
BmrFI	CCNGG	1 cut(s)	138
BmrI	ACTGGG	2 cut(s)	831, 1771
BmsI	GCATC	2 cut(s)	106, 1252
BmuI	ACTGGG	2 cut(s)	831, 1771
BpiI	GAAGAC	2 cut(s)	124, 1449
BpmI	CTGGAG	2 cut(s)	1470, 1721
Bpu14I	TTCGAA	2 cut(s)	431, 1347
BpuMI	CCSGG	1 cut(s)	138
Bsa29I	ATCGAT	2 cut(s)	195, 1006
BsaAI	YACGTR	2 cut(s)	659, 1670
BsaHI	GRCGYC	2 cut(s)	1227, 1390
BsaI	GGTCTC	2 cut(s)	531, 752
BsaJI	CCNNGG	6 cut(s)	136, 339, 569, 1047, 1057, 1475
Bsc4I	CCNNNNNNNGG	5 cut(s)	144, 345, 482, 1272, 1386
Bse1I	ACTGG	4 cut(s)	448, 826, 1453, 1777
BseCI	ATCGAT	2 cut(s)	195, 1006
BseDI	CCNNGG	6 cut(s)	136, 339, 569, 1047, 1057, 1475
BseGI	GGATG	6 cut(s)	121, 593, 1057, 1249, 1306, 1681
BseLI	CCNNNNNNNGG	5 cut(s)	144, 345, 482, 1272, 1386
BseMII	CTCAG	2 cut(s)	1044, 1055
BseNI	ACTGG	4 cut(s)	448, 826, 1453, 1777
BseRI	GAGGAG	5 cut(s)	44, 576, 1288, 1583, 1670
BseX3I	CGGCCG	1 cut(s)	1723
BseXI	GCAGC	6 cut(s)	63, 706, 738, 852, 917, 1106
BsgI	GTGCAG	2 cut(s)	802, 1113
Bsh1285I	CGRYCG	1 cut(s)	1726
BshFI	GGCC	4 cut(s)	338, 1062, 1474, 1725
BshNI	GGYRCC	1 cut(s)	1389
BshVI	ATCGAT	2 cut(s)	195, 1006
BsiEI	CGRYCG	1 cut(s)	1726
BsiHKAI	GWGCWC	4 cut(s)	36, 110, 1020, 1683
BsiHKCI	CYCGRG	1 cut(s)	755
BsiSI	CCGG	2 cut(s)	138, 1387
BslFI	GGGAC	1 cut(s)	817
BslI	CCNNNNNNNGG	5 cut(s)	144, 345, 482, 1272, 1386
BsmAI	GTCTC	4 cut(s)	531, 752, 1248, 1683
BsmFI	GGGAC	1 cut(s)	817
BsmI	GAATGC	2 cut(s)	373, 1751
BsnI	GGCC	4 cut(s)	338, 1062, 1474, 1725
Bso31I	GGTCTC	2 cut(s)	531, 752
BsoBI	CYCGRG	1 cut(s)	755
Bsp119I	TTCGAA	2 cut(s)	431, 1347
Bsp1286I	GDGCHC	5 cut(s)	36, 110, 1020, 1404, 1683
Bsp143I	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
BspACI	CCGC	3 cut(s)	119, 476, 1097
BspANI	GGCC	4 cut(s)	338, 1062, 1474, 1725
BspCNI	CTCAG	2 cut(s)	1043, 1056
BspDI	ATCGAT	2 cut(s)	195, 1006
BspHI	TCATGA	1 cut(s)	549
BspLI	GGNNCC	3 cut(s)	1378, 1391, 1453
BspMI	ACCTGC	2 cut(s)	346, 1280
BspPI	GGATC	4 cut(s)	78, 148, 478, 1658
BspQI	GCTCTTC	1 cut(s)	1008
BspT104I	TTCGAA	2 cut(s)	431, 1347
BspT107I	GGYRCC	1 cut(s)	1389
BspTI	CTTAAG	1 cut(s)	509
BspTNI	GGTCTC	2 cut(s)	531, 752
BsrI	ACTGG	4 cut(s)	448, 826, 1453, 1777
BssECI	CCNNGG	6 cut(s)	136, 339, 569, 1047, 1057, 1475
BssMI	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
BssNI	GRCGYC	2 cut(s)	1227, 1390
BssT1I	CCWWGG	3 cut(s)	1047, 1057, 1475
Bst4CI	ACNGT	1 cut(s)	151
Bst6I	CTCTTC	6 cut(s)	318, 1008, 1158, 1179, 1316, 1520
BstACI	GRCGYC	2 cut(s)	1227, 1390
BstAFI	CTTAAG	1 cut(s)	509
BstAPI	GCANNNNNTGC	1 cut(s)	716
BstBAI	YACGTR	2 cut(s)	659, 1670
BstBI	TTCGAA	2 cut(s)	431, 1347
BstC8I	GCNNGC	5 cut(s)	402, 582, 712, 724, 1287
BstDEI	CTNAG	4 cut(s)	418, 782, 1030, 1064
BstDSI	CCRYGG	1 cut(s)	339
BstEII	GGTNACC	1 cut(s)	644
BstF5I	GGATG	6 cut(s)	121, 593, 1057, 1249, 1306, 1681
BstH2I	RGCGCY	2 cut(s)	1393, 1483
BstHHI	GCGC	5 cut(s)	389, 943, 1207, 1392, 1482
BstKTI	GATC	8 cut(s)	73, 143, 195, 473, 1006, 1308, 1333, 1653
BstMAI	GTCTC	4 cut(s)	531, 752, 1248, 1683
BstMBI	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
BstMCI	CGRYCG	1 cut(s)	1726
BstMWI	GCNNNNNNNGC	3 cut(s)	401, 716, 1510
BstNSI	RCATGY	1 cut(s)	620
BstPI	GGTNACC	1 cut(s)	644
BstSCI	CCNGG	1 cut(s)	136
BstSFI	CTRYAG	3 cut(s)	1423, 1483, 1628
BstV1I	GCAGC	6 cut(s)	63, 706, 738, 852, 917, 1106
BstV2I	GAAGAC	2 cut(s)	124, 1449
BstX2I	RGATCY	1 cut(s)	470
BstXI	CCANNNNNNTGG	2 cut(s)	179, 1500
BstYI	RGATCY	1 cut(s)	470
BstZI	CGGCCG	1 cut(s)	1723
Bsu15I	ATCGAT	2 cut(s)	195, 1006
BsuRI	GGCC	4 cut(s)	338, 1062, 1474, 1725
BsuTUI	ATCGAT	2 cut(s)	195, 1006
BtgI	CCRYGG	1 cut(s)	339
BtsCI	GGATG	6 cut(s)	121, 593, 1057, 1249, 1306, 1681
BtsIMutI	CAGTG	4 cut(s)	441, 633, 819, 1446
BveI	ACCTGC	2 cut(s)	346, 1280
Cac8I	GCNNGC	5 cut(s)	402, 582, 712, 724, 1287
CaiI	CAGNNNCTG	1 cut(s)	395
CciI	TCATGA	1 cut(s)	549
CfoI	GCGC	5 cut(s)	389, 943, 1207, 1392, 1482
Cfr13I	GGNCC	1 cut(s)	210
ClaI	ATCGAT	2 cut(s)	195, 1006
CseI	GACGC	1 cut(s)	1235
Csp6I	GTAC	3 cut(s)	1068, 1189, 1327
CviAII	CATG	8 cut(s)	60, 95, 144, 503, 550, 617, 716, 899
CviQI	GTAC	3 cut(s)	1068, 1189, 1327
DdeI	CTNAG	4 cut(s)	418, 782, 1030, 1064
DinI	GGCGCC	1 cut(s)	1391
DpnI	GATC	8 cut(s)	72, 142, 194, 472, 1005, 1307, 1332, 1652
DpnII	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
EaeI	YGGCCR	2 cut(s)	336, 1723
EagI	CGGCCG	1 cut(s)	1723
Eam1104I	CTCTTC	6 cut(s)	318, 1008, 1158, 1179, 1316, 1520
EarI	CTCTTC	6 cut(s)	318, 1008, 1158, 1179, 1316, 1520
Ecl136II	GAGCTC	3 cut(s)	34, 108, 1018
EclXI	CGGCCG	1 cut(s)	1723
Eco130I	CCWWGG	3 cut(s)	1047, 1057, 1475
Eco24I	GRGCYC	4 cut(s)	36, 110, 1020, 1404
Eco31I	GGTCTC	2 cut(s)	531, 752
Eco47I	GGWCC	1 cut(s)	210
Eco52I	CGGCCG	1 cut(s)	1723
Eco53kI	GAGCTC	3 cut(s)	34, 108, 1018
Eco57I	CTGAAG	2 cut(s)	876, 981
Eco72I	CACGTG	2 cut(s)	659, 1670
Eco88I	CYCGRG	1 cut(s)	755
Eco91I	GGTNACC	1 cut(s)	644
EcoICRI	GAGCTC	3 cut(s)	34, 108, 1018
EcoO65I	GGTNACC	1 cut(s)	644
EcoRI	GAATTC	1 cut(s)	427
EcoT14I	CCWWGG	3 cut(s)	1047, 1057, 1475
EcoT22I	ATGCAT	1 cut(s)	1751
EcoT38I	GRGCYC	4 cut(s)	36, 110, 1020, 1404
EgeI	GGCGCC	1 cut(s)	1391
EheI	GGCGCC	1 cut(s)	1391
ErhI	CCWWGG	3 cut(s)	1047, 1057, 1475
FaeI	CATG	8 cut(s)	63, 98, 147, 506, 553, 620, 719, 902
FalI	AAGNNNNNCTT	4 cut(s)	929, 961, 1241, 1273
FaqI	GGGAC	1 cut(s)	817
FatI	CATG	8 cut(s)	59, 94, 143, 502, 549, 616, 715, 898
FauI	CCCGC	1 cut(s)	1090
Fnu4HI	GCNGC	6 cut(s)	52, 720, 752, 866, 931, 1095
FokI	GGATG	6 cut(s)	128, 580, 1064, 1256, 1313, 1688
FriOI	GRGCYC	4 cut(s)	36, 110, 1020, 1404
Fsp4HI	GCNGC	6 cut(s)	52, 720, 752, 866, 931, 1095
FspBI	CTAG	6 cut(s)	320, 1025, 1181, 1373, 1583, 1587
FspI	TGCGCA	1 cut(s)	1206
GlaI	GCGC	5 cut(s)	388, 942, 1206, 1391, 1481
GluI	GCNGC	6 cut(s)	52, 720, 752, 866, 931, 1095
GsuI	CTGGAG	2 cut(s)	1470, 1721
HaeII	RGCGCY	2 cut(s)	1393, 1483
HaeIII	GGCC	4 cut(s)	338, 1062, 1474, 1725
HapII	CCGG	2 cut(s)	138, 1387
HgaI	GACGC	1 cut(s)	1235
HhaI	GCGC	5 cut(s)	389, 943, 1207, 1392, 1482
Hin1I	GRCGYC	2 cut(s)	1227, 1390
Hin1II	CATG	8 cut(s)	63, 98, 147, 506, 553, 620, 719, 902
Hin6I	GCGC	5 cut(s)	387, 941, 1205, 1390, 1480
HinP1I	GCGC	5 cut(s)	387, 941, 1205, 1390, 1480
HincII	GTYRAC	4 cut(s)	100, 268, 1606, 1764
HindII	GTYRAC	4 cut(s)	100, 268, 1606, 1764
HindIII	AAGCTT	3 cut(s)	174, 273, 1195
HinfI	GANTC	4 cut(s)	308, 662, 1544, 1691
HpaII	CCGG	2 cut(s)	138, 1387
HphI	GGTGA	5 cut(s)	340, 497, 656, 766, 1364
Hpy166II	GTNNAC	6 cut(s)	100, 268, 343, 841, 1606, 1764
Hpy188I	TCNGA	5 cut(s)	115, 169, 573, 1033, 1731
Hpy188III	TCNNGA	7 cut(s)	40, 281, 320, 550, 757, 1234, 1337
Hpy8I	GTNNAC	6 cut(s)	100, 268, 343, 841, 1606, 1764
Hpy99I	CGWCG	1 cut(s)	1229
HpyCH4III	ACNGT	1 cut(s)	151
HpyCH4IV	ACGT	2 cut(s)	658, 1669
HpyCH4V	TGCA	9 cut(s)	51, 260, 726, 819, 868, 933, 1094, 1142, 1749
HpyF10VI	GCNNNNNNNGC	3 cut(s)	401, 716, 1510
HpyF3I	CTNAG	4 cut(s)	418, 782, 1030, 1064
HpySE526I	ACGT	2 cut(s)	658, 1669
Hsp92I	GRCGYC	2 cut(s)	1227, 1390
Hsp92II	CATG	8 cut(s)	63, 98, 147, 506, 553, 620, 719, 902
HspAI	GCGC	5 cut(s)	387, 941, 1205, 1390, 1480
KasI	GGCGCC	1 cut(s)	1389
Kzo9I	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
LguI	GCTCTTC	1 cut(s)	1008
LmnI	GCTCC	5 cut(s)	31, 589, 975, 1023, 1451
Lsp1109I	GCAGC	6 cut(s)	63, 706, 738, 852, 917, 1106
LweI	GCATC	2 cut(s)	106, 1252
MaeI	CTAG	6 cut(s)	320, 1025, 1181, 1373, 1583, 1587
MaeII	ACGT	2 cut(s)	658, 1669
MaeIII	GTNAC	3 cut(s)	460, 485, 644
MalI	GATC	8 cut(s)	72, 142, 194, 472, 1005, 1307, 1332, 1652
MboI	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
MfeI	CAATTG	2 cut(s)	261, 666
MflI	RGATCY	1 cut(s)	470
MhlI	GDGCHC	5 cut(s)	36, 110, 1020, 1404, 1683
MluCI	AATT	9 cut(s)	261, 332, 427, 608, 666, 745, 1381, 1706, 1785
Mly113I	GGCGCC	1 cut(s)	1390
MlyI	GAGTC	3 cut(s)	302, 671, 1685
MmeI	TCCRAC	3 cut(s)	192, 1086, 1343
Mph1103I	ATGCAT	1 cut(s)	1751
MseI	TTAA	6 cut(s)	21, 510, 764, 893, 1464, 1792
MslI	CAYNNNNRTG	2 cut(s)	1313, 1498
MspA1I	CMGCKG	1 cut(s)	1097
MspCI	CTTAAG	1 cut(s)	509
MspI	CCGG	2 cut(s)	138, 1387
MspR9I	CCNGG	1 cut(s)	138
MunI	CAATTG	2 cut(s)	261, 666
Mva1269I	GAATGC	2 cut(s)	373, 1751
MwoI	GCNNNNNNNGC	3 cut(s)	401, 716, 1510
NarI	GGCGCC	1 cut(s)	1390
NciI	CCSGG	1 cut(s)	138
NdeII	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
NlaIII	CATG	8 cut(s)	63, 98, 147, 506, 553, 620, 719, 902
NlaIV	GGNNCC	3 cut(s)	1378, 1391, 1453
NmeAIII	GCCGAG	1 cut(s)	1701
NmuCI	GTSAC	3 cut(s)	460, 485, 644
NsbI	TGCGCA	1 cut(s)	1206
NsiI	ATGCAT	1 cut(s)	1751
NspI	RCATGY	1 cut(s)	620
NspV	TTCGAA	2 cut(s)	431, 1347
PaeR7I	CTCGAG	1 cut(s)	755
PagI	TCATGA	1 cut(s)	549
PciSI	GCTCTTC	1 cut(s)	1008
PcsI	WCGNNNNNNNCGW	1 cut(s)	1437
PctI	GAATGC	2 cut(s)	373, 1751
PfeI	GAWTC	1 cut(s)	1544
PkrI	GCNGC	6 cut(s)	53, 721, 753, 867, 932, 1096
PleI	GAGTC	3 cut(s)	302, 670, 1685
PluTI	GGCGCC	1 cut(s)	1393
PmaCI	CACGTG	2 cut(s)	659, 1670
PmlI	CACGTG	2 cut(s)	659, 1670
PpsI	GAGTC	3 cut(s)	302, 670, 1685
Ppu21I	YACGTR	2 cut(s)	659, 1670
Psp124BI	GAGCTC	3 cut(s)	36, 110, 1020
PspCI	CACGTG	2 cut(s)	659, 1670
PspEI	GGTNACC	1 cut(s)	644
PspN4I	GGNNCC	3 cut(s)	1378, 1391, 1453
PspPI	GGNCC	1 cut(s)	210
PstNI	CAGNNNCTG	1 cut(s)	395
PsuI	RGATCY	1 cut(s)	470
RsaI	GTAC	3 cut(s)	1069, 1190, 1328
RsaNI	GTAC	3 cut(s)	1068, 1189, 1327
RseI	CAYNNNNRTG	2 cut(s)	1313, 1498
SacI	GAGCTC	3 cut(s)	36, 110, 1020
SapI	GCTCTTC	1 cut(s)	1008
SaqAI	TTAA	6 cut(s)	21, 510, 764, 893, 1464, 1792
SatI	GCNGC	6 cut(s)	52, 720, 752, 866, 931, 1095
Sau3AI	GATC	8 cut(s)	70, 140, 192, 470, 1003, 1305, 1330, 1650
Sau96I	GGNCC	1 cut(s)	210
SchI	GAGTC	3 cut(s)	302, 671, 1685
ScrFI	CCNGG	1 cut(s)	138
SduI	GDGCHC	5 cut(s)	36, 110, 1020, 1404, 1683
SfaNI	GCATC	2 cut(s)	106, 1252
SfcI	CTRYAG	3 cut(s)	1423, 1483, 1628
SfoI	GGCGCC	1 cut(s)	1391
Sfr274I	CTCGAG	1 cut(s)	755
SfuI	TTCGAA	2 cut(s)	431, 1347
SinI	GGWCC	1 cut(s)	210
SlaI	CTCGAG	1 cut(s)	755
SmiMI	CAYNNNNRTG	2 cut(s)	1313, 1498
SmlI	CTYRAG	2 cut(s)	509, 755
SmoI	CTYRAG	2 cut(s)	509, 755
Sse9I	AATT	9 cut(s)	261, 332, 427, 608, 666, 745, 1381, 1706, 1785
SsiI	CCGC	3 cut(s)	119, 476, 1097
SspDI	GGCGCC	1 cut(s)	1389
SspI	AATATT	1 cut(s)	363
SspMI	CTAG	6 cut(s)	320, 1025, 1181, 1373, 1583, 1587
SstI	GAGCTC	3 cut(s)	36, 110, 1020
StyD4I	CCNGG	1 cut(s)	136
StyI	CCWWGG	3 cut(s)	1047, 1057, 1475
TaaI	ACNGT	1 cut(s)	151
TaiI	ACGT	2 cut(s)	661, 1672
TaqI	TCGA	8 cut(s)	195, 431, 756, 1006, 1078, 1311, 1347, 1653
TasI	AATT	9 cut(s)	261, 332, 427, 608, 666, 745, 1381, 1706, 1785
TatI	WGTACW	2 cut(s)	1067, 1188
TfiI	GAWTC	1 cut(s)	1544
Tru1I	TTAA	6 cut(s)	21, 510, 764, 893, 1464, 1792
Tru9I	TTAA	6 cut(s)	21, 510, 764, 893, 1464, 1792
TscAI	CASTG	4 cut(s)	448, 640, 826, 1453
TseFI	GTSAC	3 cut(s)	460, 485, 644
TseI	GCWGC	6 cut(s)	51, 719, 751, 865, 930, 1094
Tsp45I	GTSAC	3 cut(s)	460, 485, 644
TspDTI	ATGAA	8 cut(s)	48, 83, 115, 267, 481, 526, 915, 1187
TspRI	CASTG	4 cut(s)	448, 640, 826, 1453
Vha464I	CTTAAG	1 cut(s)	509
VpaK11BI	GGWCC	1 cut(s)	210
XapI	RAATTY	1 cut(s)	427
XbaI	TCTAGA	1 cut(s)	319
XceI	RCATGY	1 cut(s)	620
XhoI	CTCGAG	1 cut(s)	755
XspI	CTAG	6 cut(s)	320, 1025, 1181, 1373, 1583, 1587
Zsp2I	ATGCAT	1 cut(s)	1751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.