Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0005764

Physical Location & Seq

Genomic Coordinates Forward (+)

1922046 .. 1925088

Gene Structure 3043 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG028900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGATAGTGAAACACTTGTTAAGAAAATAGGAATCAGTGAGGAGCTCATCAAGAAAAGTTGCAGCCTTTCATGGAAGGATCAGTTCAGTAAGGAGCTGTATCATGTTGACAAGAGCTCATCGGATGCGGTGTTCATCGTCTTCCCCGGATCATGGACGGTCAAAGAGTGGTTTTCCGGCGACCAAGCTTTTGGAGAAACAAAGATCAATAGTAAAGATTGGTCCAAAAAAGCCTTTCCTTCTATGAGAAGTATTGGCAATGATGATGTTGCAATTGTCAACCAAGCTTTTCTGGAAAGGTTTGAACTTGTATTGAATTTGAAGGACTCCAACTTTCGAGAAGAGGTGAAATCGGCCGAGAGCGGGAATAAGCCAATAATATTTACAGGGCATTCTTCTGGTGGCGCAGTTGCTGTGCTTGCTACAATCTGGTTCTTAGAACAGAGTCCGAAAGAATACACTGGAACAGCCAAATGTGTGACTTTTGGATCTCCGCTTGTCGGTGACTACATTGTTTCTCATGCTCTTAAGAGAGAGAAGTGGTCTGAACACTTCATACATTTTGTCATGAGATATGACATTGTTCCTCGGATTTTGCTTGCTCCTCGCTCATCCATTGAGCAACAATTAGAGCATGTCCTCCATTACTTCACTGCAAATGGTGACCATTATCCACGTGAGTCAATTGAGTTTTATACAAATGTAATGAGGAATACCTCTGCTCTCGCAAGCCATGCTGCCTGCAAACTGATGGGGAATACTAATTTGCTGCTCGAGACCTTAACCAACTTCACCAAACTAAGCCCTTATAGACCTTTTGGGACTTACATTTTCTGCACTGGGAATGGGAAGCTGGTTCACTTGGACAACCCTGAAGCTGTGCTGCAACTCCTTTTCTTCTCTTGTCAGTTAAGCCATGAAAACGAAATGGAAGCAACAGCTGGGAGCTGCGTAAAGGCGCACTTGGACTACAAAACTGAAGTGTTAGGGAGGAGCTTGAAAGAGAATGTGGTTTTTGTTGATCGATTGGAAGAGCTCCCCCTAGCCCCAGATGGTAGTGCCTTGGATGACCTTGGCCTGAGTACAAGAGGTAGATTGTGCCTTCGTGCAGCGGGAGAGTTAGAGAAACAAAAACAAAAAAACCGAGAGCAGATTAACAAAAAGAAGGCAGAAATGGAAGAGGGAATGAAAGGACTAGAAGAGTACAGAACCTTCAATGCGCAGAAAGTGGGATATTACGACGCCTTCAAGAAACAGAATGAAAAGAGAGACTTTGATGCCAATGTGAGGAGGCTGGTGCTGGCAGGTATATGGGATGAGATCATCGAAATGTTGAAGAGGTACGATCTTCCTGACGAGTTTGAAGGTGAAGATAATTGGATAGAACTAGGAACCAAGTTCCGGCGCCTTGTTGAGCCTCTTGATATTGCCAACTACTACAGACACGCAAAGAACGAAGACACTGGAGCCTATATGATTAAGGGAAGGCCAAGGCGCTACAGATACCCACAGAGATGGCTTGAAAAGAAGGTAGGTTTGGAGAGGGATACCTGTGGTGAATCTTGCTTTTGGGCAGAGGTGGAGGAGTTGCTCAAACTAGCTAGTAATGGTGGTAAAGTTGATGAGACAAGGGCTAAAAAACTACAGGAAGGACTAGCTCGATGGATTGAGCAGGGTGTGGCAGGTGAGGAGGTGTTCTTGGGAGACTCTACGTTTCTCAAATTGTGGGACGAACTCGGCCGTCTGAAACTCCAACAGGAATCCATTCGCACATTGATAGACACAGGCAAGTTTGCCAACTTATCAGTTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0001666 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007584 GO:0008150 GO:0008219 GO:0009605 GO:0009607 GO:0009626 GO:0009627 GO:0009628 GO:0009653 GO:0009814 GO:0009987 GO:0009991 GO:0010035 GO:0010310 GO:0010618 GO:0010941 GO:0010942 GO:0012501 GO:0016298 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031667 GO:0032502 GO:0033554 GO:0034050 GO:0036293 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045087 GO:0046983 GO:0048518 GO:0048522 GO:0048646 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070482 GO:0098542 GO:1901700 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

604

Amino Acids

68.97

Weight (kDa)

6.1

Isoelectric Point (pI)

39.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase_3	PF01764	70 - 199	5.6e-21	Lipase (class 3)
EDS1_EP	PF18117	399 - 583	1.2e-49	Enhanced disease susceptibility 1 protein EP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48080 AT3G48090 AT3G48090
fragaria_vesca	FvH4_5g16230 FvH4_5g16230
malus_domestica	MD06G1182600.v1.1 MD06G1182800.v1.1 MD14G1188600.v1.1 MD14G1188700.v1.1
prunus_persica	Prupe.5G180700_v2.0.a1 Prupe.5G180900_v2.0.a1 Prupe.5G181000_v2.0.a1
pyrus_communis	pycom06g16150 pycom06g16180 pycom14g15630 pycom14g15640
rosa_chinensis	RchiOBHm_Chr2g0170571 RchiOBHm_Chr7g0179871
rosa_laevigata	RLG00000005316
rosa_multiflora	Rmu_sc0012773.1_g000001 Rmu_sc0016092.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273380
rosa_rugosa	Rorug06G0428800
rosa_samantha	Rh7AG028900 Rh7BG028000 Rh7CG029800 Rh7DG029200
rosa_wichuraiana	Rw7G002310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1673
Acc16I	TGCGCA	1 cut(s)	1221
Acc36I	ACCTGC	2 cut(s)	1295, 1673
AccB1I	GGYRCC	1 cut(s)	1404
AccBSI	CCGCTC	1 cut(s)	363
AciI	CCGC	4 cut(s)	128, 363, 494, 1112
AclWI	GGATC	3 cut(s)	87, 157, 496
AcoI	YGGCCR	2 cut(s)	354, 1738
AcsI	RAATTY	1 cut(s)	316
AcuI	CTGAAG	2 cut(s)	894, 999
AcvI	CACGTG	1 cut(s)	677
AcyI	GRCGYC	2 cut(s)	1242, 1405
AfaI	GTAC	3 cut(s)	1084, 1205, 1343
AfiI	CCNNNNNNNGG	5 cut(s)	153, 363, 500, 1287, 1401
AflII	CTTAAG	1 cut(s)	527
AgsI	TTSAA	9 cut(s)	305, 316, 322, 1000, 1216, 1249, 1336, 1364, 1523
AjuI	GAANNNNNNNTTGG	2 cut(s)	1520, 1552
AloI	GAACNNNNNNTCC	2 cut(s)	116, 148
Alw21I	GWGCWC	3 cut(s)	48, 119, 1038
Alw26I	GTCTC	4 cut(s)	770, 1263, 1619, 1698
AlwI	GGATC	3 cut(s)	87, 157, 496
AlwNI	CAGNNNCTG	1 cut(s)	413
Ama87I	CYCGRG	1 cut(s)	773
AoxI	GGCC	4 cut(s)	354, 1075, 1487, 1738
ApeKI	GCWGC	6 cut(s)	63, 737, 769, 883, 948, 1109
ApoI	RAATTY	1 cut(s)	316
ArsI	GACNNNNNNTTYG	2 cut(s)	173, 205
Asp700I	GAANNNNTTC	1 cut(s)	1764
AspLEI	GCGC	5 cut(s)	407, 961, 1222, 1407, 1497
AspS9I	GGNCC	1 cut(s)	222
AsuC2I	CCSGG	1 cut(s)	147
AsuHPI	GGTGA	7 cut(s)	358, 515, 674, 784, 1379, 1568, 1697
AvaI	CYCGRG	1 cut(s)	773
AvaII	GGWCC	1 cut(s)	222
BanI	GGYRCC	1 cut(s)	1404
BanII	GRGCYC	3 cut(s)	48, 119, 1038
BarI	GAAGNNNNNNTAC	2 cut(s)	1196, 1228
BbrPI	CACGTG	1 cut(s)	677
BbsI	GAAGAC	2 cut(s)	133, 1464
Bbv12I	GWGCWC	3 cut(s)	48, 119, 1038
BbvI	GCAGC	6 cut(s)	75, 724, 756, 870, 935, 1121
BccI	CCATC	4 cut(s)	745, 1046, 1509, 1656
BceAI	ACGGC	1 cut(s)	1725
BciVI	GTATCC	1 cut(s)	1540
BcnI	CCSGG	1 cut(s)	147
BcoDI	GTCTC	4 cut(s)	770, 1263, 1619, 1698
BfaI	CTAG	6 cut(s)	1043, 1196, 1388, 1598, 1602, 1655
BfmI	CTRYAG	3 cut(s)	1438, 1498, 1643
BfoI	RGCGCY	2 cut(s)	1408, 1498
BfrI	CTTAAG	1 cut(s)	527
BfuAI	ACCTGC	2 cut(s)	1295, 1673
BfuI	GTATCC	1 cut(s)	1540
BisI	GCNGC	6 cut(s)	64, 738, 770, 884, 949, 1110
BlsI	GCNGC	6 cut(s)	65, 739, 771, 885, 950, 1111
Bme1390I	CCNGG	1 cut(s)	147
Bme18I	GGWCC	1 cut(s)	222
BmeT110I	CYCGRG	1 cut(s)	773
BmgT120I	GGNCC	1 cut(s)	222
BmiI	GGNNCC	3 cut(s)	1393, 1406, 1468
BmrFI	CCNGG	1 cut(s)	147
BmrI	ACTGGG	1 cut(s)	849
BmsI	GCATC	2 cut(s)	115, 1267
BmuI	ACTGGG	1 cut(s)	849
BpiI	GAAGAC	2 cut(s)	133, 1464
BpmI	CTGGAG	1 cut(s)	1485
BpuMI	CCSGG	1 cut(s)	147
Bsa29I	ATCGAT	1 cut(s)	1024
BsaAI	YACGTR	1 cut(s)	677
BsaHI	GRCGYC	2 cut(s)	1242, 1405
BsaI	GGTCTC	1 cut(s)	770
BsaJI	CCNNGG	5 cut(s)	145, 587, 1062, 1072, 1490
Bsc4I	CCNNNNNNNGG	5 cut(s)	153, 363, 500, 1287, 1401
Bse1I	ACTGG	3 cut(s)	466, 844, 1468
Bse3DI	GCAATG	1 cut(s)	265
BseCI	ATCGAT	1 cut(s)	1024
BseDI	CCNNGG	5 cut(s)	145, 587, 1062, 1072, 1490
BseGI	GGATG	4 cut(s)	130, 611, 1072, 1321
BseLI	CCNNNNNNNGG	5 cut(s)	153, 363, 500, 1287, 1401
BseMI	GCAATG	1 cut(s)	265
BseMII	CTCAG	1 cut(s)	1070
BseNI	ACTGG	3 cut(s)	466, 844, 1468
BseRI	GAGGAG	6 cut(s)	56, 594, 1006, 1303, 1598, 1703
BseX3I	CGGCCG	2 cut(s)	354, 1738
BseXI	GCAGC	6 cut(s)	75, 724, 756, 870, 935, 1121
BseYI	CCCAGC	1 cut(s)	941
BsgI	GTGCAG	2 cut(s)	820, 1128
Bsh1285I	CGRYCG	2 cut(s)	357, 1741
BshFI	GGCC	4 cut(s)	356, 1077, 1489, 1740
BshNI	GGYRCC	1 cut(s)	1404
BshVI	ATCGAT	1 cut(s)	1024
BsiEI	CGRYCG	2 cut(s)	357, 1741
BsiHKAI	GWGCWC	3 cut(s)	48, 119, 1038
BsiHKCI	CYCGRG	1 cut(s)	773
BsiSI	CCGG	3 cut(s)	147, 177, 1402
BslFI	GGGAC	2 cut(s)	835, 1742
BslI	CCNNNNNNNGG	5 cut(s)	153, 363, 500, 1287, 1401
BsmAI	GTCTC	4 cut(s)	770, 1263, 1619, 1698
BsmFI	GGGAC	2 cut(s)	835, 1742
BsmI	GAATGC	1 cut(s)	391
BsnI	GGCC	4 cut(s)	356, 1077, 1489, 1740
Bso31I	GGTCTC	1 cut(s)	770
BsoBI	CYCGRG	1 cut(s)	773
Bsp1286I	GDGCHC	3 cut(s)	48, 119, 1038
Bsp143I	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
BspACI	CCGC	4 cut(s)	128, 363, 494, 1112
BspANI	GGCC	4 cut(s)	356, 1077, 1489, 1740
BspCNI	CTCAG	1 cut(s)	1071
BspDI	ATCGAT	1 cut(s)	1024
BspHI	TCATGA	1 cut(s)	567
BspLI	GGNNCC	3 cut(s)	1393, 1406, 1468
BspMI	ACCTGC	2 cut(s)	1295, 1673
BspPI	GGATC	3 cut(s)	87, 157, 496
BspQI	GCTCTTC	1 cut(s)	1026
BspT107I	GGYRCC	1 cut(s)	1404
BspTI	CTTAAG	1 cut(s)	527
BspTNI	GGTCTC	1 cut(s)	770
BsrBI	CCGCTC	1 cut(s)	363
BsrDI	GCAATG	1 cut(s)	265
BsrI	ACTGG	3 cut(s)	466, 844, 1468
BssECI	CCNNGG	5 cut(s)	145, 587, 1062, 1072, 1490
BssMI	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
BssNI	GRCGYC	2 cut(s)	1242, 1405
BssT1I	CCWWGG	3 cut(s)	1062, 1072, 1490
Bst4CI	ACNGT	1 cut(s)	160
Bst6I	CTCTTC	5 cut(s)	336, 1026, 1173, 1194, 1331
BstACI	GRCGYC	2 cut(s)	1242, 1405
BstAFI	CTTAAG	1 cut(s)	527
BstAPI	GCANNNNNTGC	1 cut(s)	734
BstBAI	YACGTR	1 cut(s)	677
BstC8I	GCNNGC	5 cut(s)	420, 600, 730, 742, 1302
BstDEI	CTNAG	3 cut(s)	436, 800, 1079
BstEII	GGTNACC	1 cut(s)	662
BstF5I	GGATG	4 cut(s)	130, 611, 1072, 1321
BstH2I	RGCGCY	2 cut(s)	1408, 1498
BstHHI	GCGC	5 cut(s)	407, 961, 1222, 1407, 1497
BstKTI	GATC	7 cut(s)	82, 152, 207, 491, 1024, 1323, 1348
BstMAI	GTCTC	4 cut(s)	770, 1263, 1619, 1698
BstMBI	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
BstMCI	CGRYCG	2 cut(s)	357, 1741
BstMWI	GCNNNNNNNGC	2 cut(s)	419, 734
BstNSI	RCATGY	1 cut(s)	638
BstPI	GGTNACC	1 cut(s)	662
BstSCI	CCNGG	1 cut(s)	145
BstSFI	CTRYAG	3 cut(s)	1438, 1498, 1643
BstV1I	GCAGC	6 cut(s)	75, 724, 756, 870, 935, 1121
BstV2I	GAAGAC	2 cut(s)	133, 1464
BstX2I	RGATCY	1 cut(s)	488
BstXI	CCANNNNNNTGG	2 cut(s)	191, 1515
BstYI	RGATCY	1 cut(s)	488
BstZI	CGGCCG	2 cut(s)	354, 1738
Bsu15I	ATCGAT	1 cut(s)	1024
BsuI	GTATCC	1 cut(s)	1540
BsuRI	GGCC	4 cut(s)	356, 1077, 1489, 1740
BsuTUI	ATCGAT	1 cut(s)	1024
BtsCI	GGATG	4 cut(s)	130, 611, 1072, 1321
BtsI	GCAGTG	1 cut(s)	651
BtsIMutI	CAGTG	5 cut(s)	43, 459, 651, 837, 1461
BveI	ACCTGC	2 cut(s)	1295, 1673
Cac8I	GCNNGC	5 cut(s)	420, 600, 730, 742, 1302
CaiI	CAGNNNCTG	1 cut(s)	413
CciI	TCATGA	1 cut(s)	567
CfoI	GCGC	5 cut(s)	407, 961, 1222, 1407, 1497
Cfr13I	GGNCC	1 cut(s)	222
ClaI	ATCGAT	1 cut(s)	1024
CseI	GACGC	1 cut(s)	1250
Csp6I	GTAC	3 cut(s)	1083, 1204, 1342
CviAII	CATG	8 cut(s)	72, 104, 153, 521, 568, 635, 734, 917
CviQI	GTAC	3 cut(s)	1083, 1204, 1342
DdeI	CTNAG	3 cut(s)	436, 800, 1079
DinI	GGCGCC	1 cut(s)	1406
DpnI	GATC	7 cut(s)	81, 151, 206, 490, 1023, 1322, 1347
DpnII	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
EaeI	YGGCCR	2 cut(s)	354, 1738
EagI	CGGCCG	2 cut(s)	354, 1738
Eam1104I	CTCTTC	5 cut(s)	336, 1026, 1173, 1194, 1331
EarI	CTCTTC	5 cut(s)	336, 1026, 1173, 1194, 1331
Ecl136II	GAGCTC	3 cut(s)	46, 117, 1036
EclXI	CGGCCG	2 cut(s)	354, 1738
Eco130I	CCWWGG	3 cut(s)	1062, 1072, 1490
Eco24I	GRGCYC	3 cut(s)	48, 119, 1038
Eco31I	GGTCTC	1 cut(s)	770
Eco47I	GGWCC	1 cut(s)	222
Eco52I	CGGCCG	2 cut(s)	354, 1738
Eco53kI	GAGCTC	3 cut(s)	46, 117, 1036
Eco57I	CTGAAG	2 cut(s)	894, 999
Eco72I	CACGTG	1 cut(s)	677
Eco88I	CYCGRG	1 cut(s)	773
Eco91I	GGTNACC	1 cut(s)	662
EcoICRI	GAGCTC	3 cut(s)	46, 117, 1036
EcoO65I	GGTNACC	1 cut(s)	662
EcoT14I	CCWWGG	3 cut(s)	1062, 1072, 1490
EcoT38I	GRGCYC	3 cut(s)	48, 119, 1038
EgeI	GGCGCC	1 cut(s)	1406
EheI	GGCGCC	1 cut(s)	1406
ErhI	CCWWGG	3 cut(s)	1062, 1072, 1490
FaeI	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 737, 920
FalI	AAGNNNNNCTT	4 cut(s)	947, 979, 1256, 1288
FaqI	GGGAC	2 cut(s)	835, 1742
FatI	CATG	8 cut(s)	71, 103, 152, 520, 567, 634, 733, 916
FauI	CCCGC	2 cut(s)	356, 1105
Fnu4HI	GCNGC	6 cut(s)	64, 738, 770, 884, 949, 1110
FokI	GGATG	4 cut(s)	137, 598, 1079, 1328
FriOI	GRGCYC	3 cut(s)	48, 119, 1038
Fsp4HI	GCNGC	6 cut(s)	64, 738, 770, 884, 949, 1110
FspBI	CTAG	6 cut(s)	1043, 1196, 1388, 1598, 1602, 1655
FspI	TGCGCA	1 cut(s)	1221
GlaI	GCGC	5 cut(s)	406, 960, 1221, 1406, 1496
GluI	GCNGC	6 cut(s)	64, 738, 770, 884, 949, 1110
GsaI	CCCAGC	1 cut(s)	945
GsuI	CTGGAG	1 cut(s)	1485
HaeII	RGCGCY	2 cut(s)	1408, 1498
HaeIII	GGCC	4 cut(s)	356, 1077, 1489, 1740
HapII	CCGG	3 cut(s)	147, 177, 1402
HgaI	GACGC	1 cut(s)	1250
HhaI	GCGC	5 cut(s)	407, 961, 1222, 1407, 1497
Hin1I	GRCGYC	2 cut(s)	1242, 1405
Hin1II	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 737, 920
Hin6I	GCGC	5 cut(s)	405, 959, 1220, 1405, 1495
HinP1I	GCGC	5 cut(s)	405, 959, 1220, 1405, 1495
HincII	GTYRAC	2 cut(s)	109, 280
HindII	GTYRAC	2 cut(s)	109, 280
HindIII	AAGCTT	2 cut(s)	186, 285
HinfI	GANTC	7 cut(s)	33, 326, 445, 680, 1559, 1706, 1760
HpaII	CCGG	3 cut(s)	147, 177, 1402
HphI	GGTGA	7 cut(s)	358, 515, 674, 784, 1379, 1568, 1697
Hpy166II	GTNNAC	3 cut(s)	109, 280, 859
Hpy188I	TCNGA	5 cut(s)	124, 450, 547, 591, 1746
Hpy188III	TCNNGA	8 cut(s)	52, 293, 338, 568, 775, 1249, 1352, 1421
Hpy8I	GTNNAC	3 cut(s)	109, 280, 859
Hpy99I	CGWCG	1 cut(s)	1244
HpyCH4III	ACNGT	1 cut(s)	160
HpyCH4IV	ACGT	2 cut(s)	676, 1712
HpyCH4V	TGCA	7 cut(s)	63, 272, 656, 744, 837, 886, 1109
HpyF10VI	GCNNNNNNNGC	2 cut(s)	419, 734
HpyF3I	CTNAG	3 cut(s)	436, 800, 1079
HpySE526I	ACGT	2 cut(s)	676, 1712
Hsp92I	GRCGYC	2 cut(s)	1242, 1405
Hsp92II	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 737, 920
HspAI	GCGC	5 cut(s)	405, 959, 1220, 1405, 1495
KasI	GGCGCC	1 cut(s)	1404
Kzo9I	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
LguI	GCTCTTC	1 cut(s)	1026
LmnI	GCTCC	7 cut(s)	43, 94, 607, 945, 993, 1041, 1466
Lsp1109I	GCAGC	6 cut(s)	75, 724, 756, 870, 935, 1121
LweI	GCATC	2 cut(s)	115, 1267
MaeI	CTAG	6 cut(s)	1043, 1196, 1388, 1598, 1602, 1655
MaeII	ACGT	2 cut(s)	676, 1712
MaeIII	GTNAC	3 cut(s)	478, 503, 662
MalI	GATC	7 cut(s)	81, 151, 206, 490, 1023, 1322, 1347
MbiI	CCGCTC	1 cut(s)	363
MboI	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
MfeI	CAATTG	2 cut(s)	273, 684
MflI	RGATCY	1 cut(s)	488
MhlI	GDGCHC	3 cut(s)	48, 119, 1038
MluCI	AATT	7 cut(s)	273, 316, 626, 684, 763, 1375, 1721
Mly113I	GGCGCC	1 cut(s)	1405
MlyI	GAGTC	4 cut(s)	320, 454, 689, 1700
MmeI	TCCRAC	2 cut(s)	354, 1777
MroXI	GAANNNNTTC	1 cut(s)	1764
MseI	TTAA	6 cut(s)	21, 528, 782, 911, 1155, 1479
MslI	CAYNNNNRTG	2 cut(s)	1328, 1513
MspA1I	CMGCKG	2 cut(s)	941, 1112
MspCI	CTTAAG	1 cut(s)	527
MspI	CCGG	3 cut(s)	147, 177, 1402
MspR9I	CCNGG	1 cut(s)	147
MunI	CAATTG	2 cut(s)	273, 684
Mva1269I	GAATGC	1 cut(s)	391
MwoI	GCNNNNNNNGC	2 cut(s)	419, 734
NarI	GGCGCC	1 cut(s)	1405
NciI	CCSGG	1 cut(s)	147
NdeII	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
NlaIII	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 737, 920
NlaIV	GGNNCC	3 cut(s)	1393, 1406, 1468
NmeAIII	GCCGAG	2 cut(s)	382, 1716
NmuCI	GTSAC	3 cut(s)	478, 503, 662
NsbI	TGCGCA	1 cut(s)	1221
NspI	RCATGY	1 cut(s)	638
PaeR7I	CTCGAG	1 cut(s)	773
PagI	TCATGA	1 cut(s)	567
PaqCI	CACCTGC	1 cut(s)	1673
PciSI	GCTCTTC	1 cut(s)	1026
PcsI	WCGNNNNNNNCGW	1 cut(s)	1452
PctI	GAATGC	1 cut(s)	391
PdmI	GAANNNNTTC	1 cut(s)	1764
PfeI	GAWTC	3 cut(s)	33, 1559, 1760
PkrI	GCNGC	6 cut(s)	65, 739, 771, 885, 950, 1111
PleI	GAGTC	4 cut(s)	320, 453, 688, 1700
PluTI	GGCGCC	1 cut(s)	1408
PmaCI	CACGTG	1 cut(s)	677
PmlI	CACGTG	1 cut(s)	677
PpsI	GAGTC	4 cut(s)	320, 453, 688, 1700
Ppu21I	YACGTR	1 cut(s)	677
Psp124BI	GAGCTC	3 cut(s)	48, 119, 1038
PspCI	CACGTG	1 cut(s)	677
PspEI	GGTNACC	1 cut(s)	662
PspFI	CCCAGC	1 cut(s)	941
PspN4I	GGNNCC	3 cut(s)	1393, 1406, 1468
PspPI	GGNCC	1 cut(s)	222
PsrI	GAACNNNNNNTAC	2 cut(s)	540, 572
PstNI	CAGNNNCTG	1 cut(s)	413
PsuI	RGATCY	1 cut(s)	488
PvuII	CAGCTG	1 cut(s)	941
RsaI	GTAC	3 cut(s)	1084, 1205, 1343
RsaNI	GTAC	3 cut(s)	1083, 1204, 1342
RseI	CAYNNNNRTG	2 cut(s)	1328, 1513
SacI	GAGCTC	3 cut(s)	48, 119, 1038
SapI	GCTCTTC	1 cut(s)	1026
SaqAI	TTAA	6 cut(s)	21, 528, 782, 911, 1155, 1479
SatI	GCNGC	6 cut(s)	64, 738, 770, 884, 949, 1110
Sau3AI	GATC	7 cut(s)	79, 149, 204, 488, 1021, 1320, 1345
Sau96I	GGNCC	1 cut(s)	222
SchI	GAGTC	4 cut(s)	320, 454, 689, 1700
ScrFI	CCNGG	1 cut(s)	147
SduI	GDGCHC	3 cut(s)	48, 119, 1038
SfaNI	GCATC	2 cut(s)	115, 1267
SfcI	CTRYAG	3 cut(s)	1438, 1498, 1643
SfoI	GGCGCC	1 cut(s)	1406
Sfr274I	CTCGAG	1 cut(s)	773
SinI	GGWCC	1 cut(s)	222
SlaI	CTCGAG	1 cut(s)	773
SmiMI	CAYNNNNRTG	2 cut(s)	1328, 1513
SmlI	CTYRAG	2 cut(s)	527, 773
SmoI	CTYRAG	2 cut(s)	527, 773
Sse9I	AATT	7 cut(s)	273, 316, 626, 684, 763, 1375, 1721
SsiI	CCGC	4 cut(s)	128, 363, 494, 1112
SspDI	GGCGCC	1 cut(s)	1404
SspI	AATATT	1 cut(s)	381
SspMI	CTAG	6 cut(s)	1043, 1196, 1388, 1598, 1602, 1655
SstI	GAGCTC	3 cut(s)	48, 119, 1038
StyD4I	CCNGG	1 cut(s)	145
StyI	CCWWGG	3 cut(s)	1062, 1072, 1490
TaaI	ACNGT	1 cut(s)	160
TaiI	ACGT	2 cut(s)	679, 1715
TaqI	TCGA	5 cut(s)	337, 774, 1024, 1326, 1660
TasI	AATT	7 cut(s)	273, 316, 626, 684, 763, 1375, 1721
TatI	WGTACW	2 cut(s)	1082, 1203
TfiI	GAWTC	3 cut(s)	33, 1559, 1760
Tru1I	TTAA	6 cut(s)	21, 528, 782, 911, 1155, 1479
Tru9I	TTAA	6 cut(s)	21, 528, 782, 911, 1155, 1479
TscAI	CASTG	5 cut(s)	43, 466, 658, 844, 1468
TseFI	GTSAC	3 cut(s)	478, 503, 662
TseI	GCWGC	6 cut(s)	63, 737, 769, 883, 948, 1109
Tsp45I	GTSAC	3 cut(s)	478, 503, 662
TspDTI	ATGAA	6 cut(s)	60, 124, 544, 933, 1202, 1275
TspRI	CASTG	5 cut(s)	43, 466, 658, 844, 1468
Vha464I	CTTAAG	1 cut(s)	527
VpaK11BI	GGWCC	1 cut(s)	222
XapI	RAATTY	1 cut(s)	316
XceI	RCATGY	1 cut(s)	638
XhoI	CTCGAG	1 cut(s)	773
XmnI	GAANNNNTTC	1 cut(s)	1764
XspI	CTAG	6 cut(s)	1043, 1196, 1388, 1598, 1602, 1655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.