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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g14340 FvH4_5g14340 FvH4_5g14340 FvH4_5g14340 FvH4_5g14340 FvH4_5g14340 FvH4_5g14340 |
| malus_domestica | MD14G1208500.v1.1 |
| prunus_persica | Prupe.5G200400_v2.0.a1 Prupe.5G200400_v2.0.a1 Prupe.5G200400_v2.0.a1 |
| pyrus_communis | pycom14g17210 |
| rosa_chinensis | RchiOBHm_Chr7g0182421 |
| rosa_laevigata | RLG00000005124 |
| rosa_multiflora | Rmu_sc0034215.1_g000002 Rmu_sc0034215.1_g000003 Rmu_ssc0000376.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00271260 |
| rosa_rugosa | Rorug06G0447500 Rorug06G0447600 Rorug06G0447700 |
| rosa_samantha | Rh7AG051000 Rh7BG050500 Rh7CG052100 Rh7DG049800 |
| rosa_wichuraiana | Rw7G004140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2480, 3962 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1891 |
| Acc36I | ACCTGC | 1 cut(s) | 3268 |
| AccB1I | GGYRCC | 4 cut(s) | 488, 871, 1339, 4664 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2728, 3935, 4473 |
| AccI | GTMKAC | 3 cut(s) | 1010, 2924, 3971 |
| AciI | CCGC | 8 cut(s) | 651, 1138, 1490, 2260, 2581, 2968, 3586, 4814 |
| AcoI | YGGCCR | 1 cut(s) | 4531 |
| AcvI | CACGTG | 1 cut(s) | 2642 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 2701, 2728, 3032, 3586, 3935, 4423, 4473, 4576, 4686 |
| AflII | CTTAAG | 1 cut(s) | 3703 |
| AgeI | ACCGGT | 1 cut(s) | 308 |
| AjiI | CACGTC | 1 cut(s) | 4333 |
| AjnI | CCWGG | 3 cut(s) | 2041, 3666, 3820 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2108, 2140 |
| AleI | CACNNNNGTG | 2 cut(s) | 596, 1286 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3561, 3593 |
| Alw21I | GWGCWC | 3 cut(s) | 2074, 2167, 2203 |
| Alw26I | GTCTC | 9 cut(s) | 1095, 2023, 2103, 2316, 2567, 2731, 4217, 4952, 4990 |
| Alw44I | GTGCAC | 1 cut(s) | 2070 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 608, 1025 |
| Ama87I | CYCGRG | 2 cut(s) | 446, 1445 |
| AoxI | GGCC | 9 cut(s) | 531, 1233, 1370, 2652, 2718, 3662, 4409, 4531, 4563 |
| ApaLI | GTGCAC | 1 cut(s) | 2070 |
| AseI | ATTAAT | 1 cut(s) | 303 |
| AsiGI | ACCGGT | 1 cut(s) | 308 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 256, 420, 2325, 2469, 2664, 3843 |
| AspA2I | CCTAGG | 1 cut(s) | 1763 |
| AspLEI | GCGC | 6 cut(s) | 201, 295, 824, 2430, 2622, 2763 |
| AspS9I | GGNCC | 6 cut(s) | 658, 2652, 2719, 3663, 3938, 5067 |
| AsuC2I | CCSGG | 1 cut(s) | 248 |
| AsuII | TTCGAA | 1 cut(s) | 48 |
| AsuNHI | GCTAGC | 3 cut(s) | 1478, 3047, 4402 |
| AvaI | CYCGRG | 2 cut(s) | 446, 1445 |
| AvaII | GGWCC | 3 cut(s) | 658, 3938, 5067 |
| AvrII | CCTAGG | 1 cut(s) | 1763 |
| BaeGI | GKGCMC | 3 cut(s) | 1096, 1717, 2074 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1421, 1454, 3894, 3927 |
| BalI | TGGCCA | 1 cut(s) | 4533 |
| BamHI | GGATCC | 1 cut(s) | 1808 |
| BanI | GGYRCC | 4 cut(s) | 488, 871, 1339, 4664 |
| BanII | GRGCYC | 3 cut(s) | 38, 1517, 2203 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4188, 4220 |
| BauI | CACGAG | 1 cut(s) | 2025 |
| BbrPI | CACGTG | 1 cut(s) | 2642 |
| BbsI | GAAGAC | 4 cut(s) | 1299, 4281, 4335, 5055 |
| Bbv12I | GWGCWC | 3 cut(s) | 2074, 2167, 2203 |
| BbvCI | CCTCAGC | 1 cut(s) | 3481 |
| BceAI | ACGGC | 4 cut(s) | 2774, 3081, 4550, 4977 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3200, 3234 |
| BciT130I | CCWGG | 3 cut(s) | 2043, 3668, 3822 |
| BciVI | GTATCC | 4 cut(s) | 3050, 3445, 3994, 4090 |
| BclI | TGATCA | 4 cut(s) | 811, 1360, 3177, 4489 |
| BcnI | CCSGG | 1 cut(s) | 248 |
| BcoDI | GTCTC | 9 cut(s) | 1095, 2023, 2103, 2316, 2567, 2731, 4217, 4952, 4990 |
| BfmI | CTRYAG | 3 cut(s) | 101, 3209, 4268 |
| BfoI | RGCGCY | 1 cut(s) | 825 |
| BfrI | CTTAAG | 1 cut(s) | 3703 |
| BfuAI | ACCTGC | 1 cut(s) | 3268 |
| BfuI | GTATCC | 4 cut(s) | 3050, 3445, 3994, 4090 |
| BglII | AGATCT | 6 cut(s) | 1273, 1633, 3640, 3737, 3841, 4832 |
| BlnI | CCTAGG | 1 cut(s) | 1763 |
| BmcAI | AGTACT | 3 cut(s) | 1672, 3835, 4347 |
| Bme1390I | CCNGG | 4 cut(s) | 248, 2043, 3668, 3822 |
| Bme18I | GGWCC | 3 cut(s) | 658, 3938, 5067 |
| BmeT110I | CYCGRG | 2 cut(s) | 446, 1445 |
| BmgBI | CACGTC | 1 cut(s) | 4333 |
| BmgT120I | GGNCC | 6 cut(s) | 658, 2652, 2719, 3663, 3938, 5067 |
| BmrFI | CCNGG | 4 cut(s) | 248, 2043, 3668, 3822 |
| BmrI | ACTGGG | 3 cut(s) | 1996, 3080, 4236 |
| BmsI | GCATC | 8 cut(s) | 604, 1489, 1757, 1954, 2636, 3384, 4124, 4638 |
| BmtI | GCTAGC | 3 cut(s) | 1482, 3051, 4406 |
| BmuI | ACTGGG | 3 cut(s) | 1996, 3080, 4236 |
| BpiI | GAAGAC | 4 cut(s) | 1299, 4281, 4335, 5055 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1244, 1276 |
| BpmI | CTGGAG | 2 cut(s) | 4124, 4362 |
| Bpu10I | CCTNAGC | 4 cut(s) | 654, 2914, 3021, 3481 |
| Bpu14I | TTCGAA | 1 cut(s) | 48 |
| BpuEI | CTTGAG | 4 cut(s) | 2319, 2583, 3431, 3620 |
| BpuMI | CCSGG | 1 cut(s) | 248 |
| Bsa29I | ATCGAT | 1 cut(s) | 3759 |
| BsaAI | YACGTR | 4 cut(s) | 620, 668, 2075, 2642 |
| BsaBI | GATNNNNATC | 2 cut(s) | 522, 2889 |
| BsaWI | WCCGGW | 1 cut(s) | 308 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 6, 36, 2044, 2074, 3561, 3591 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 2701, 2728, 3032, 3586, 3935, 4423, 4473, 4576, 4686 |
| Bse118I | RCCGGY | 2 cut(s) | 308, 1342 |
| Bse1I | ACTGG | 9 cut(s) | 1991, 3075, 3994, 4193, 4231, 4345, 4652, 4982, 5061 |
| Bse3DI | GCAATG | 4 cut(s) | 766, 1591, 2947, 4459 |
| Bse8I | GATNNNNATC | 2 cut(s) | 522, 2889 |
| BseBI | CCWGG | 3 cut(s) | 2043, 3668, 3822 |
| BseCI | ATCGAT | 1 cut(s) | 3759 |
| BseJI | GATNNNNATC | 2 cut(s) | 522, 2889 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 2701, 2728, 3032, 3586, 3935, 4423, 4473, 4576, 4686 |
| BseMI | GCAATG | 4 cut(s) | 766, 1591, 2947, 4459 |
| BseNI | ACTGG | 9 cut(s) | 1991, 3075, 3994, 4193, 4231, 4345, 4652, 4982, 5061 |
| BseRI | GAGGAG | 4 cut(s) | 2065, 2470, 2630, 2717 |
| BseSI | GKGCMC | 3 cut(s) | 1096, 1717, 2074 |
| BseYI | CCCAGC | 5 cut(s) | 207, 848, 2694, 4575, 4810 |
| BsgI | GTGCAG | 2 cut(s) | 2655, 4173 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2068 |
| BshFI | GGCC | 9 cut(s) | 533, 1235, 1372, 2654, 2720, 3664, 4411, 4533, 4565 |
| BshNI | GGYRCC | 4 cut(s) | 488, 871, 1339, 4664 |
| BshTI | ACCGGT | 1 cut(s) | 308 |
| BshVI | ATCGAT | 1 cut(s) | 3759 |
| BsiEI | CGRYCG | 1 cut(s) | 2068 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2074, 2167, 2203 |
| BsiHKCI | CYCGRG | 2 cut(s) | 446, 1445 |
| BsiSI | CCGG | 4 cut(s) | 247, 309, 1343, 3124 |
| BslFI | GGGAC | 3 cut(s) | 254, 1781, 4441 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 2701, 2728, 3032, 3586, 3935, 4423, 4473, 4576, 4686 |
| BsmAI | GTCTC | 9 cut(s) | 1095, 2023, 2103, 2316, 2567, 2731, 4217, 4952, 4990 |
| BsmBI | CGTCTC | 2 cut(s) | 1095, 4952 |
| BsmFI | GGGAC | 3 cut(s) | 254, 1781, 4441 |
| BsmI | GAATGC | 1 cut(s) | 1214 |
| BsnI | GGCC | 9 cut(s) | 533, 1235, 1372, 2654, 2720, 3664, 4411, 4533, 4565 |
| BsoBI | CYCGRG | 2 cut(s) | 446, 1445 |
| Bsp119I | TTCGAA | 1 cut(s) | 48 |
| Bsp1286I | GDGCHC | 7 cut(s) | 38, 1096, 1517, 1717, 2074, 2167, 2203 |
| Bsp1407I | TGTACA | 1 cut(s) | 3910 |
| Bsp19I | CCATGG | 3 cut(s) | 1949, 1959, 2655 |
| BspACI | CCGC | 8 cut(s) | 651, 1138, 1490, 2260, 2581, 2968, 3586, 4814 |
| BspANI | GGCC | 9 cut(s) | 533, 1235, 1372, 2654, 2720, 3664, 4411, 4533, 4565 |
| BspDI | ATCGAT | 1 cut(s) | 3759 |
| BspHI | TCATGA | 1 cut(s) | 2440 |
| BspMAI | CTGCAG | 2 cut(s) | 3213, 4272 |
| BspMI | ACCTGC | 1 cut(s) | 3268 |
| BspOI | GCTAGC | 3 cut(s) | 1482, 3051, 4406 |
| BspQI | GCTCTTC | 1 cut(s) | 711 |
| BspT104I | TTCGAA | 1 cut(s) | 48 |
| BspT107I | GGYRCC | 4 cut(s) | 488, 871, 1339, 4664 |
| BspTI | CTTAAG | 1 cut(s) | 3703 |
| BsrDI | GCAATG | 4 cut(s) | 766, 1591, 2947, 4459 |
| BsrFI | RCCGGY | 2 cut(s) | 308, 1342 |
| BsrGI | TGTACA | 1 cut(s) | 3910 |
| BsrI | ACTGG | 9 cut(s) | 1991, 3075, 3994, 4193, 4231, 4345, 4652, 4982, 5061 |
| BssAI | RCCGGY | 2 cut(s) | 308, 1342 |
| BssSI | CACGAG | 1 cut(s) | 2025 |
| BssT1I | CCWWGG | 8 cut(s) | 1096, 1763, 1949, 1959, 2655, 3861, 4528, 4552 |
| Bst2BI | CACGAG | 1 cut(s) | 2025 |
| Bst2UI | CCWGG | 3 cut(s) | 2043, 3668, 3822 |
| BstAFI | CTTAAG | 1 cut(s) | 3703 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2633 |
| BstAUI | TGTACA | 1 cut(s) | 3910 |
| BstBAI | YACGTR | 4 cut(s) | 620, 668, 2075, 2642 |
| BstBI | TTCGAA | 1 cut(s) | 48 |
| BstDSI | CCRYGG | 3 cut(s) | 1949, 1959, 2655 |
| BstEII | GGTNACC | 2 cut(s) | 896, 3678 |
| BstH2I | RGCGCY | 1 cut(s) | 825 |
| BstHHI | GCGC | 6 cut(s) | 201, 295, 824, 2430, 2622, 2763 |
| BstMAI | GTCTC | 9 cut(s) | 1095, 2023, 2103, 2316, 2567, 2731, 4217, 4952, 4990 |
| BstMCI | CGRYCG | 1 cut(s) | 2068 |
| BstNI | CCWGG | 3 cut(s) | 2043, 3668, 3822 |
| BstNSI | RCATGY | 3 cut(s) | 1379, 1486, 2159 |
| BstPI | GGTNACC | 2 cut(s) | 896, 3678 |
| BstSCI | CCNGG | 4 cut(s) | 246, 2041, 3666, 3820 |
| BstSFI | CTRYAG | 3 cut(s) | 101, 3209, 4268 |
| BstSLI | GKGCMC | 3 cut(s) | 1096, 1717, 2074 |
| BstV2I | GAAGAC | 4 cut(s) | 1299, 4281, 4335, 5055 |
| Bsu15I | ATCGAT | 1 cut(s) | 3759 |
| BsuI | GTATCC | 4 cut(s) | 3050, 3445, 3994, 4090 |
| BsuRI | GGCC | 9 cut(s) | 533, 1235, 1372, 2654, 2720, 3664, 4411, 4533, 4565 |
| BsuTUI | ATCGAT | 1 cut(s) | 3759 |
| BtgI | CCRYGG | 3 cut(s) | 1949, 1959, 2655 |
| BtrI | CACGTC | 1 cut(s) | 4333 |
| BtsI | GCAGTG | 1 cut(s) | 2311 |
| BveI | ACCTGC | 1 cut(s) | 3268 |
| CaiI | CAGNNNCTG | 2 cut(s) | 608, 1025 |
| CciI | TCATGA | 1 cut(s) | 2440 |
| CfoI | GCGC | 6 cut(s) | 201, 295, 824, 2430, 2622, 2763 |
| Cfr10I | RCCGGY | 2 cut(s) | 308, 1342 |
| Cfr13I | GGNCC | 6 cut(s) | 658, 2652, 2719, 3663, 3938, 5067 |
| ClaI | ATCGAT | 1 cut(s) | 3759 |
| CseI | GACGC | 3 cut(s) | 2552, 2784, 2822 |
| CspAI | ACCGGT | 1 cut(s) | 308 |
| DraI | TTTAAA | 1 cut(s) | 3312 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1891 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1891 |
| EaeI | YGGCCR | 1 cut(s) | 4531 |
| Ecl136II | GAGCTC | 1 cut(s) | 2201 |
| Eco130I | CCWWGG | 8 cut(s) | 1096, 1763, 1949, 1959, 2655, 3861, 4528, 4552 |
| Eco24I | GRGCYC | 3 cut(s) | 38, 1517, 2203 |
| Eco47I | GGWCC | 3 cut(s) | 658, 3938, 5067 |
| Eco53kI | GAGCTC | 1 cut(s) | 2201 |
| Eco72I | CACGTG | 1 cut(s) | 2642 |
| Eco88I | CYCGRG | 2 cut(s) | 446, 1445 |
| Eco91I | GGTNACC | 2 cut(s) | 896, 3678 |
| EcoICRI | GAGCTC | 1 cut(s) | 2201 |
| EcoO109I | RGGNCCY | 1 cut(s) | 5067 |
| EcoO65I | GGTNACC | 2 cut(s) | 896, 3678 |
| EcoRI | GAATTC | 3 cut(s) | 1723, 1939, 2982 |
| EcoRII | CCWGG | 3 cut(s) | 2041, 3666, 3820 |
| EcoT14I | CCWWGG | 8 cut(s) | 1096, 1763, 1949, 1959, 2655, 3861, 4528, 4552 |
| EcoT22I | ATGCAT | 1 cut(s) | 1750 |
| EcoT38I | GRGCYC | 3 cut(s) | 38, 1517, 2203 |
| ErhI | CCWWGG | 8 cut(s) | 1096, 1763, 1949, 1959, 2655, 3861, 4528, 4552 |
| Esp3I | CGTCTC | 2 cut(s) | 1095, 4952 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1303, 1335, 2756, 2788 |
| FaqI | GGGAC | 3 cut(s) | 254, 1781, 4441 |
| FauI | CCCGC | 1 cut(s) | 3579 |
| FbaI | TGATCA | 4 cut(s) | 811, 1360, 3177, 4489 |
| FblI | GTMKAC | 3 cut(s) | 1010, 2924, 3971 |
| FriOI | GRGCYC | 3 cut(s) | 38, 1517, 2203 |
| GlaI | GCGC | 6 cut(s) | 200, 294, 823, 2429, 2621, 2762 |
| GsaI | CCCAGC | 5 cut(s) | 211, 852, 2698, 4579, 4814 |
| GsuI | CTGGAG | 2 cut(s) | 4124, 4362 |
| HaeII | RGCGCY | 1 cut(s) | 825 |
| HaeIII | GGCC | 9 cut(s) | 533, 1235, 1372, 2654, 2720, 3664, 4411, 4533, 4565 |
| HapII | CCGG | 4 cut(s) | 247, 309, 1343, 3124 |
| HgaI | GACGC | 3 cut(s) | 2552, 2784, 2822 |
| HhaI | GCGC | 6 cut(s) | 201, 295, 824, 2430, 2622, 2763 |
| Hin6I | GCGC | 6 cut(s) | 199, 293, 822, 2428, 2620, 2761 |
| HinP1I | GCGC | 6 cut(s) | 199, 293, 822, 2428, 2620, 2761 |
| HincII | GTYRAC | 2 cut(s) | 2374, 4254 |
| HindII | GTYRAC | 2 cut(s) | 2374, 4254 |
| HindIII | AAGCTT | 3 cut(s) | 2322, 2435, 3314 |
| HpaI | GTTAAC | 1 cut(s) | 2374 |
| HpaII | CCGG | 4 cut(s) | 247, 309, 1343, 3124 |
| Hpy99I | CGWCG | 1 cut(s) | 2838 |
| HspAI | GCGC | 6 cut(s) | 199, 293, 822, 2428, 2620, 2761 |
| KflI | GGGWCCC | 1 cut(s) | 5067 |
| Ksp22I | TGATCA | 4 cut(s) | 811, 1360, 3177, 4489 |
| KspAI | GTTAAC | 1 cut(s) | 2374 |
| LguI | GCTCTTC | 1 cut(s) | 711 |
| LmnI | GCTCC | 8 cut(s) | 1833, 1951, 2617, 2776, 3199, 3582, 4105, 4530 |
| LweI | GCATC | 8 cut(s) | 604, 1489, 1757, 1954, 2636, 3384, 4124, 4638 |
| MfeI | CAATTG | 1 cut(s) | 3543 |
| MhlI | GDGCHC | 7 cut(s) | 38, 1096, 1517, 1717, 2074, 2167, 2203 |
| MlsI | TGGCCA | 1 cut(s) | 4533 |
| MluNI | TGGCCA | 1 cut(s) | 4533 |
| MlyI | GAGTC | 4 cut(s) | 1685, 2318, 3114, 4594 |
| MmeI | TCCRAC | 2 cut(s) | 1001, 4200 |
| Mox20I | TGGCCA | 1 cut(s) | 4533 |
| Mph1103I | ATGCAT | 1 cut(s) | 1750 |
| MroXI | GAANNNNTTC | 6 cut(s) | 256, 420, 2325, 2469, 2664, 3843 |
| MscI | TGGCCA | 1 cut(s) | 4533 |
| MslI | CAYNNNNRTG | 4 cut(s) | 596, 1286, 2160, 3392 |
| Msp20I | TGGCCA | 1 cut(s) | 4533 |
| MspA1I | CMGCKG | 4 cut(s) | 1138, 2581, 3485, 4814 |
| MspCI | CTTAAG | 1 cut(s) | 3703 |
| MspI | CCGG | 4 cut(s) | 247, 309, 1343, 3124 |
| MspR9I | CCNGG | 4 cut(s) | 248, 2043, 3668, 3822 |
| MunI | CAATTG | 1 cut(s) | 3543 |
| Mva1269I | GAATGC | 1 cut(s) | 1214 |
| MvaI | CCWGG | 3 cut(s) | 2043, 3668, 3822 |
| NciI | CCSGG | 1 cut(s) | 248 |
| NcoI | CCATGG | 3 cut(s) | 1949, 1959, 2655 |
| NheI | GCTAGC | 3 cut(s) | 1478, 3047, 4402 |
| NmuCI | GTSAC | 7 cut(s) | 342, 646, 896, 3295, 3535, 3678, 4634 |
| NsiI | ATGCAT | 1 cut(s) | 1750 |
| NspI | RCATGY | 3 cut(s) | 1379, 1486, 2159 |
| NspV | TTCGAA | 1 cut(s) | 48 |
| OliI | CACNNNNGTG | 2 cut(s) | 596, 1286 |
| PaeI | GCATGC | 1 cut(s) | 2159 |
| PaeR7I | CTCGAG | 2 cut(s) | 446, 1445 |
| PagI | TCATGA | 1 cut(s) | 2440 |
| PciSI | GCTCTTC | 1 cut(s) | 711 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2032 |
| PctI | GAATGC | 1 cut(s) | 1214 |
| PdmI | GAANNNNTTC | 6 cut(s) | 256, 420, 2325, 2469, 2664, 3843 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2728, 3935, 4473 |
| PinAI | ACCGGT | 1 cut(s) | 308 |
| PleI | GAGTC | 4 cut(s) | 1684, 2317, 3114, 4593 |
| PmaCI | CACGTG | 1 cut(s) | 2642 |
| PmlI | CACGTG | 1 cut(s) | 2642 |
| PpsI | GAGTC | 4 cut(s) | 1684, 2317, 3114, 4593 |
| Ppu21I | YACGTR | 4 cut(s) | 620, 668, 2075, 2642 |
| PpuMI | RGGWCCY | 1 cut(s) | 5067 |
| PshBI | ATTAAT | 1 cut(s) | 303 |
| PsiI | TTATAA | 2 cut(s) | 2480, 3962 |
| Psp124BI | GAGCTC | 1 cut(s) | 2203 |
| Psp5II | RGGWCCY | 1 cut(s) | 5067 |
| Psp6I | CCWGG | 3 cut(s) | 2041, 3666, 3820 |
| PspCI | CACGTG | 1 cut(s) | 2642 |
| PspEI | GGTNACC | 2 cut(s) | 896, 3678 |
| PspFI | CCCAGC | 5 cut(s) | 207, 848, 2694, 4575, 4810 |
| PspGI | CCWGG | 3 cut(s) | 2041, 3666, 3820 |
| PspPI | GGNCC | 6 cut(s) | 658, 2652, 2719, 3663, 3938, 5067 |
| PspPPI | RGGWCCY | 1 cut(s) | 5067 |
| PstI | CTGCAG | 2 cut(s) | 3213, 4272 |
| PstNI | CAGNNNCTG | 2 cut(s) | 608, 1025 |
| PvuII | CAGCTG | 1 cut(s) | 3485 |
| RseI | CAYNNNNRTG | 4 cut(s) | 596, 1286, 2160, 3392 |
| SacI | GAGCTC | 1 cut(s) | 2203 |
| SapI | GCTCTTC | 1 cut(s) | 711 |
| Sau96I | GGNCC | 6 cut(s) | 658, 2652, 2719, 3663, 3938, 5067 |
| ScaI | AGTACT | 3 cut(s) | 1672, 3835, 4347 |
| SchI | GAGTC | 4 cut(s) | 1685, 2318, 3114, 4594 |
| ScrFI | CCNGG | 4 cut(s) | 248, 2043, 3668, 3822 |
| SduI | GDGCHC | 7 cut(s) | 38, 1096, 1517, 1717, 2074, 2167, 2203 |
| SfaNI | GCATC | 8 cut(s) | 604, 1489, 1757, 1954, 2636, 3384, 4124, 4638 |
| SfcI | CTRYAG | 3 cut(s) | 101, 3209, 4268 |
| Sfr274I | CTCGAG | 2 cut(s) | 446, 1445 |
| SfuI | TTCGAA | 1 cut(s) | 48 |
| SinI | GGWCC | 3 cut(s) | 658, 3938, 5067 |
| SlaI | CTCGAG | 2 cut(s) | 446, 1445 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 596, 1286, 2160, 3392 |
| SmlI | CTYRAG | 7 cut(s) | 446, 1445, 2334, 2598, 3410, 3599, 3703 |
| SmoI | CTYRAG | 7 cut(s) | 446, 1445, 2334, 2598, 3410, 3599, 3703 |
| SphI | GCATGC | 1 cut(s) | 2159 |
| SsiI | CCGC | 8 cut(s) | 651, 1138, 1490, 2260, 2581, 2968, 3586, 4814 |
| SspI | AATATT | 1 cut(s) | 726 |
| SstI | GAGCTC | 1 cut(s) | 2203 |
| StyD4I | CCNGG | 4 cut(s) | 246, 2041, 3666, 3820 |
| StyI | CCWWGG | 8 cut(s) | 1096, 1763, 1949, 1959, 2655, 3861, 4528, 4552 |
| TatI | WGTACW | 8 cut(s) | 1670, 1699, 1996, 3833, 3910, 4156, 4345, 4727 |
| TauI | GCSGC | 2 cut(s) | 1141, 1493 |
| TseFI | GTSAC | 7 cut(s) | 342, 646, 896, 3295, 3535, 3678, 4634 |
| Tsp45I | GTSAC | 7 cut(s) | 342, 646, 896, 3295, 3535, 3678, 4634 |
| TspGWI | ACGGA | 4 cut(s) | 1901, 2003, 2545, 3930 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2728, 3935, 4473 |
| Vha464I | CTTAAG | 1 cut(s) | 3703 |
| VneI | GTGCAC | 1 cut(s) | 2070 |
| VpaK11BI | GGWCC | 3 cut(s) | 658, 3938, 5067 |
| VspI | ATTAAT | 1 cut(s) | 303 |
| XbaI | TCTAGA | 1 cut(s) | 3872 |
| XceI | RCATGY | 3 cut(s) | 1379, 1486, 2159 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3587 |
| XhoI | CTCGAG | 2 cut(s) | 446, 1445 |
| XmaJI | CCTAGG | 1 cut(s) | 1763 |
| XmiI | GTMKAC | 3 cut(s) | 1010, 2924, 3971 |
| XmnI | GAANNNNTTC | 6 cut(s) | 256, 420, 2325, 2469, 2664, 3843 |
| ZrmI | AGTACT | 3 cut(s) | 1672, 3835, 4347 |
| Zsp2I | ATGCAT | 1 cut(s) | 1750 |