Rh7AG051000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0006932
Physical Location & Seq
Forward (+)
3494911 .. 3502989
8079 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG051000.1

Sequence Viewer

Length: 4491 bp
ATGGAGAATATTGGAGAAGCTCTAGATGATGATGGCGCTGGATGGTTCGAAGTGAAAAAGAAACAGAGAAGTAGCTCAAAGTTGTCTCTACAGAGTTGGGTTGGGGGAAGTTCTGGGAAGAATGCTAACTCTTCGAGTGGTCACTCTTTATCAATTGAGAACAGTAGGAATTATTTTGGCAAGCGCAGATCCCAGCTTCCAAAAGTAGGGGGAAATAGTGCTGTACATAGCCAAGGAAGTGGTGCAAGCACCATTCCTACGCCAAATAAGAGTAAAATGGGTGTTCCCTGTGATATTGGCATTGACAAGCAATGTGCTAAATGTCCCACGTCATCTCCTTCATTTATTACAAATCCTGATGGTGAAACTAGAGATCTAGAGAAGATCCCTGCAAGAGATAACTCTGAAGTGGTTCATAAAATTAAGTGGGGGGATCTAGAGGATGATGGTTTGGCACTTCCTCTTACTAACGTTGTCGGCACCAGAATCAAGTTTGGTGCTATTGGAGATGAAAATCTGGTGGCCTCCAAAGAGCATGAGAATTGTCATAGTTTTGTCCCTTCTGCAAATTCACAAGAAAACAAACTGTTTGCTGCATCTGCGGATGCCAATAGTGTTTCTCACCAGACGGCGTCAGTGAATGATAAGGATCAATTGTATGAAGATAACTGCAAGGAGGTGGATATTATATCTGCTGAAAATGTTGAGGAGCCAATTCAGAATGACAAAATGGTTGATGTGGATAACAATACTTCAAATTGCAAGGCTATACATACCGAAAACATTGAAGCAGTCGCTGATGATCCTGTAAGTGCTAGCACTTTGGCTTGTGAAGAGGGTGGGACAGTGGGGAAAGTTGAAGCACCTGTGGTTGTAACTGTGGTAAGTAATCCTGCAATTTTTGAAGAATCAGGCCCTGATGGCAGTTCAAGTGAAGTTCATATCTCCAAAGATAAAGACTTAGTTCCACCTGACAAGAGCAACCCAGAAATTTGTGCAGAGCCTACCCTCACACCATCTGGACATTATATGTTGAACTCAAATATGAGTGCCCTTGGAGATTGTGACACAGGTGAAAGCAAAGAAAGGTTTAGGCAGCGACTTTGGTGCTTTCTCTTTGAGAATCTTAACCGGGCTGTGGATGAGCTTTATCTTCTTTGTGAACTAGAGTGCGATGTAGAGCAGATGAAAGAGGCCATTCTTGTTCTTGAAGAGGCTCGCTCTGATTTCAGAGATCTGAATACTAGAGTGGAGGATTTTGAGAAAATAAAAAGGGCACCATCTCAGTTGATAGATGGGGTGCCCATCACCTTGAAGAGTGACCATCGTAGGCCACATGCTCTTTCATGGGAGGTTAGAAGAATGACAACTTCTGCACACAAAGCAGAGATACTATCCTCATCTCTTGAGGCTTTTAAGAAAATTCAGAAAGAAAGAGCTAGCTTTTGTGCAGCCAATGATGCTAAACTTATGGGCCTTAAGTACACAAATATCCAATCTAGTGATAACCTCAATACGTTACCTGCAAGAAATGATGGGAAATTAAATTCTAAAGAATCAACAATGAAGTTAAGAAGATATAGTGGAGGTTCAGATCTCATTGAAGCCGTCACTAATGGGAATAAGAATACTGAATCAAGCAGTTTGAGCAGAGTAAAGTTGGTACAAAATGGGCGTGTCTCTCAGAATTCATCTTCCTTTGTTGTTAATGCATCTAGATTGCCTCCTAGGGACAATTCTGCTGCTGGAAAAACTAAGAGAGAACAGTCTGGGTCTGAAGCCGAGAAGATGCTTGCTAGGAAAGAAAAACTGTCAACAGAAGGTGGTGTTGAAAAAATTGCCAAGTTGACCAATCAGTCCAAAAAGCAAATTCCACTTTTGGAAAAAGATAAAGAAAAGAGGAATTCAGCTCCATGGAAATCCATGGATGCTTGGAAGGAGAAGAGGAATTGGGAGGATGTTCTTTCATCTCCTTCTCGTGTCTCTTCCCGAGTTTCACATTCACCTGGCTTGAGGAGGAAAAGTGCTGATCGTGCACGAATGTTGCATGATAAACTAATGTCTCCTGAGAAGAAGAAAAAAACTAGTTTGGATCTGAAGAGAGAGGCAGAAGAAAAACATGCCCGTGCTATGAGAATCAGAAGCGAGCTAGAGAATGAGAGAGCTCAGAAGCTTCATCGTAGTTCAGAAAAGATGAATAGAGTTAATGAATTACAGGCTGTAAAAAATATGAAGTTACGGGAGGGAATGCATGCTCGTCATCAACGCAGTGAGTCTCGACACGAAGCACATCTAGCTCAACGAGTGAAGAGAGCTGGTGATGAAAGCATCAAAGTTAAAGAGGTTCAGTTCATAACTTCCTTAAATGAAGAAAATAAAAAGCTCAGTTTGCGCCAGAAGCATCATGATTCAGAACTGAGGAGAGCTGAAAAACTTCAAGTGATAAGAACTAAACAAAAAGAGGATATGGCGCGAGAAGAAGCTGTTTTAGAGCGGAGGAAACTCATTGAAGCTGAAAAGTTGCAGCGTCTTGCTGAAACACAGCGGAGAAAGGAAGAGGCTCAAGTTAGAAGGGAGGAGGAGCGTAAAGCATCAAGTGCAGCACGTGAAGCAAGGGCCATCGAACAACTTCGGAGGAAGGAGGAAAGAGCCAAAGCCCAGCAGGAGGAGGCTGAACTGCTGGCCCAGAAATTGGCTGAGAGACTAAGAGAAAGTGAGCAACGCCGCAAATTTTACCTGGAACAGATACGAGAGAGAGCTTCTATGGATTTCAGGGATCAATCTTCACCTTTATTACGTCGAACTTTAAACAAGGATGTTCAGGGAAGATCATCGTCAATTAACAATGGCGATGATTATCAAGTAAGCAGTTTCTCAGGCCTAGGAAGTTGCACTTTTGCGGAAAGCAATAATACAGCACAACATTCAATGAAGCGGAGAATTAAAAAAATTCGACAGAGACTTATGGCTCTAAAATATGAAATTCTTGAGCCTCCTGTTGGTGCTGAAAATGCTGGCATTGGATACAGAACAGCACTGGGAACTGCAAGGGCAAAGATTGGGAGATGGCTTCAAGAACTTCAAAGACTCCGACAAGCAAGAAAAGAAGGGGCTGCAAGCATTGGGTTAATAACTGCTGAAATGATCAAGTATTTGGAGGGAAAGGAGCTGGAACTGCAGGCTTCCCGCCAAGCTGGTCTGATTGATTTTATTGCTTCTGCCCTGCCTGCTTCTTATACATCAAAACCTGAAGCCTGTCAGGTGACAATACATCTTTTAAAACTCTTAAGGGTGGTGTTATCTCTGCCTACAAACAGGAGTTATTTTCTTGCACAGAATCTCTTGCCCCCTATCATCCCAATGCTGTCTGCTGCCCTTGAGAGCTACATAAAGATAGCAGTATCCTTGAATCCTTCTGGTAATGTTAATTTCCCATCTACCAAAACCTCAGTTGAAAATTTTGAATCAATATCTGAGGTGTTGGATGGTTATTTATGGACTGTAACAACAATAGTCAGTCACATAAGTTCTGATGAACGACAGCTCCAAATGAGGGATAGTTTGTTGGAGCTACTGATTGGCTACCAAGTTATTCACCGGCTGCGAGATCTCTTTGCCCTTTATGATCGACCCCAGGTGGAGGGGTCACCATTTCCATCGTCAATTATCTTAAGTATAAATTTGTTGGTTGTCTTAACTTCCAGGTCTGAAACTGATTGTCCTATTGATTGGAAAGACGTACCTATTGAAACACTGCTTGGAAATGGAAGTGAAGAGGCTAAGATTGCTGAGTGTGATAATTCGGAATGTCTTCCTTCAACTCAGACCTTGGAAGATTTTAGACCTCCATCATCATTGGTGAATGGTGGTAAATTTGTACATCTCCCAGATGTACCAGAGGATGGACCAGTAGATGAGATGTGTAAGATAAATGAATCTGTGGAGTCAGTAGCTGCTGCTAAGAATAGTGAGAAAGAGCAGTCTAATAGTCTGGTTGAAGCAAACAATGCTAACACCTTCAAAACAGGTGTTCCAGATGAACCCCAGAAGATGCTGAATGAGGATATTATGAAGCCTTTTGCATCAGTGGAGGAAGAGAAACACTTGGTGGATACTGGTGCGGAGCATAAGTATGATAACAGTATGAGCTTGCAGCAACCGGTAGCATTTCTTCTTTCAGCTGTATCAGAGACAGGGCTTGTCAGTCTCCCATCTCTGTTGACATCTGTGTTATTACAGGCAAACAATAGATTGTCTTCTGAACAGGCCTCAGATTCCCTCCCATCTAATTTTGAAGATGTAGCAACTGGAGTACTGAAGGTGTTGAACAATTTGGCTCTTTTGGACCTTAAATTCATGCAGAGAATGCTAGCTAGGCCTGACCTAAAAATGGAATTTTTCCATTTGATGAGTTTCCTGCTTTCTCATTGTGCCAGCAAGTGGAAAGTAGCTAATGATCAGGTAACCAATTCATGTCACTATTTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SCAPER_N

Protein Analysis

1496

Amino Acids

167.02

Weight (kDa)

7.05

Isoelectric Point (pI)

55.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAPER_N PF16501 359 - 459 1.3e-15 S phase cyclin A-associated protein in the endoplasmic reticulum
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1855
Acc36I ACCTGC 1 cut(s) 1531
AccB1I GGYRCC 3 cut(s) 479, 1276, 1300
AccB7I CCANNNNNTGG 3 cut(s) 2692, 3902, 4440
AccBSI CCGCTC 1 cut(s) 2494
AccII CGCG 1 cut(s) 2473
AciI CCGC 8 cut(s) 602, 2494, 2545, 2725, 2900, 2935, 3187, 4121
AclI AACGTT 1 cut(s) 471
AclWI GGATC 7 cut(s) 183, 379, 441, 657, 797, 2100, 2784
AcuI CTGAAG 5 cut(s) 426, 1797, 2117, 3270, 4337
AcvI CACGTG 1 cut(s) 2606
AcyI GRCGYC 1 cut(s) 632
AdeI CACNNNGTG 1 cut(s) 4108
AfaI GTAC 7 cut(s) 225, 1484, 1665, 3741, 3879, 3894, 4314
AflII CTTAAG 3 cut(s) 1478, 3286, 3670
AgeI ACCGGT 1 cut(s) 4159
AhlI ACTAGT 1 cut(s) 2084
AjiI CACGTC 1 cut(s) 330
AjnI CCWGG 4 cut(s) 2005, 2736, 3633, 3701
AjuI GAANNNNNNNTTGG 2 cut(s) 3741, 3773
AloI GAACNNNNNNTCC 2 cut(s) 3528, 3560
Alw21I GWGCWC 2 cut(s) 2038, 2167
Alw26I GTCTC 9 cut(s) 90, 1684, 1987, 2067, 2280, 2695, 2953, 4184, 4211
Alw44I GTGCAC 1 cut(s) 2034
AlwI GGATC 7 cut(s) 183, 379, 441, 657, 797, 2100, 2784
AlwNI CAGNNNCTG 3 cut(s) 797, 917, 3953
Ama87I CYCGRG 1 cut(s) 1989
ApaLI GTGCAC 1 cut(s) 2034
AsiGI ACCGGT 1 cut(s) 4159
Asp700I GAANNNNTTC 4 cut(s) 411, 2433, 2628, 3810
AspA2I CCTAGG 2 cut(s) 1727, 2881
AspLEI GCGC 4 cut(s) 38, 186, 2394, 2473
AspS9I GGNCC 6 cut(s) 914, 1474, 2616, 2683, 3905, 4345
AsuC2I CCSGG 1 cut(s) 1133
AsuII TTCGAA 1 cut(s) 48
AsuNHI GCTAGC 3 cut(s) 815, 1439, 4369
AvaI CYCGRG 1 cut(s) 1989
AvaII GGWCC 2 cut(s) 3905, 4345
AvrII CCTAGG 2 cut(s) 1727, 2881
BaeGI GKGCMC 4 cut(s) 1054, 1279, 1305, 2038
BanI GGYRCC 3 cut(s) 479, 1276, 1300
BanII GRGCYC 1 cut(s) 2167
BarI GAAGNNNNNNTAC 2 cut(s) 4155, 4187
BauI CACGAG 1 cut(s) 1977
BbrPI CACGTG 1 cut(s) 2606
BbsI GAAGAC 2 cut(s) 3803, 4248
Bbv12I GWGCWC 2 cut(s) 2038, 2167
BceAI ACGGC 2 cut(s) 645, 1592
BcgI CGANNNNNNTGC 2 cut(s) 1089, 1123
BciT130I CCWGG 4 cut(s) 2007, 2738, 3635, 3703
BciVI GTATCC 3 cut(s) 3017, 3412, 4105
BclI TGATCA 2 cut(s) 3144, 4456
BcnI CCSGG 1 cut(s) 1133
BcoDI GTCTC 9 cut(s) 90, 1684, 1987, 2067, 2280, 2695, 2953, 4184, 4211
BcuI ACTAGT 1 cut(s) 2084
BfmI CTRYAG 2 cut(s) 89, 3176
BfoI RGCGCY 1 cut(s) 39
BfrI CTTAAG 3 cut(s) 1478, 3286, 3670
BfuAI ACCTGC 1 cut(s) 1531
BfuI GTATCC 3 cut(s) 3017, 3412, 4105
BglI GCCNNNNNGGC 1 cut(s) 921
BglII AGATCT 4 cut(s) 373, 1234, 1594, 3607
BlnI CCTAGG 2 cut(s) 1727, 2881
BmcAI AGTACT 1 cut(s) 4314
Bme1390I CCNGG 5 cut(s) 1133, 2007, 2738, 3635, 3703
Bme18I GGWCC 2 cut(s) 3905, 4345
BmeT110I CYCGRG 1 cut(s) 1989
BmgBI CACGTC 1 cut(s) 330
BmgT120I GGNCC 6 cut(s) 914, 1474, 2616, 2683, 3905, 4345
BmiI GGNNCC 4 cut(s) 481, 711, 1278, 1302
BmrFI CCNGG 5 cut(s) 1133, 2007, 2738, 3635, 3703
BmrI ACTGGG 1 cut(s) 3047
BmtI GCTAGC 3 cut(s) 819, 1443, 4373
BmuI ACTGGG 1 cut(s) 3047
BpiI GAAGAC 2 cut(s) 3803, 4248
BplI GAGNNNNNCTC 2 cut(s) 1205, 1237
BpmI CTGGAG 1 cut(s) 4329
Bpu14I TTCGAA 1 cut(s) 48
BpuEI CTTGAG 5 cut(s) 1427, 2032, 2547, 3008, 3398
BpuMI CCSGG 1 cut(s) 1133
BsaAI YACGTR 1 cut(s) 2606
BsaBI GATNNNNATC 3 cut(s) 513, 648, 2856
BsaHI GRCGYC 1 cut(s) 632
BsaJI CCNNGG 8 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3633, 3828
BsaWI WCCGGW 1 cut(s) 4159
BsaXI ACNNNNNCTCC 8 cut(s) 319, 349, 2008, 2038, 3528, 3558, 4115, 4145
Bse118I RCCGGY 2 cut(s) 3597, 4159
Bse1I ACTGG 4 cut(s) 3042, 3908, 4120, 4312
Bse3DI GCAATG 1 cut(s) 317
Bse8I GATNNNNATC 3 cut(s) 513, 648, 2856
BseBI CCWGG 4 cut(s) 2007, 2738, 3635, 3703
BseDI CCNNGG 8 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3633, 3828
BseJI GATNNNNATC 3 cut(s) 513, 648, 2856
BseMI GCAATG 1 cut(s) 317
BseNI ACTGG 4 cut(s) 3042, 3908, 4120, 4312
BseRI GAGGAG 6 cut(s) 722, 2029, 2434, 2591, 2594, 2681
BseSI GKGCMC 4 cut(s) 1054, 1279, 1305, 2038
BseYI CCCAGC 2 cut(s) 192, 2658
BsgI GTGCAG 4 cut(s) 1017, 1359, 1470, 2619
Bsh1236I CGCG 1 cut(s) 2473
BshNI GGYRCC 3 cut(s) 479, 1276, 1300
BshTI ACCGGT 1 cut(s) 4159
BsiHKAI GWGCWC 2 cut(s) 2038, 2167
BsiHKCI CYCGRG 1 cut(s) 1989
BsiSI CCGG 3 cut(s) 1132, 3598, 4160
BslFI GGGAC 4 cut(s) 309, 542, 856, 1745
BsmAI GTCTC 9 cut(s) 90, 1684, 1987, 2067, 2280, 2695, 2953, 4184, 4211
BsmFI GGGAC 4 cut(s) 309, 542, 856, 1745
BsmI GAATGC 3 cut(s) 127, 2253, 4371
BsoBI CYCGRG 1 cut(s) 1989
Bsp119I TTCGAA 1 cut(s) 48
Bsp1286I GDGCHC 5 cut(s) 1054, 1279, 1305, 2038, 2167
Bsp1407I TGTACA 2 cut(s) 223, 3877
Bsp19I CCATGG 2 cut(s) 1913, 1923
BspACI CCGC 8 cut(s) 602, 2494, 2545, 2725, 2900, 2935, 3187, 4121
BspFNI CGCG 1 cut(s) 2473
BspHI TCATGA 1 cut(s) 2404
BspLI GGNNCC 4 cut(s) 481, 711, 1278, 1302
BspMAI CTGCAG 1 cut(s) 3180
BspMI ACCTGC 1 cut(s) 1531
BspOI GCTAGC 3 cut(s) 819, 1443, 4373
BspPI GGATC 7 cut(s) 183, 379, 441, 657, 797, 2100, 2784
BspT104I TTCGAA 1 cut(s) 48
BspT107I GGYRCC 3 cut(s) 479, 1276, 1300
BspTI CTTAAG 3 cut(s) 1478, 3286, 3670
BsrBI CCGCTC 1 cut(s) 2494
BsrDI GCAATG 1 cut(s) 317
BsrFI RCCGGY 2 cut(s) 3597, 4159
BsrGI TGTACA 2 cut(s) 223, 3877
BsrI ACTGG 4 cut(s) 3042, 3908, 4120, 4312
BssAI RCCGGY 2 cut(s) 3597, 4159
BssECI CCNNGG 8 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3633, 3828
BssNI GRCGYC 1 cut(s) 632
BssSI CACGAG 1 cut(s) 1977
BssT1I CCWWGG 7 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3828
Bst2BI CACGAG 1 cut(s) 1977
Bst2UI CCWGG 4 cut(s) 2007, 2738, 3635, 3703
Bst4CI ACNGT 8 cut(s) 164, 588, 847, 880, 1767, 1812, 3502, 4142
BstACI GRCGYC 1 cut(s) 632
BstAFI CTTAAG 3 cut(s) 1478, 3286, 3670
BstAPI GCANNNNNTGC 3 cut(s) 2597, 4007, 4366
BstAUI TGTACA 2 cut(s) 223, 3877
BstBAI YACGTR 1 cut(s) 2606
BstBI TTCGAA 1 cut(s) 48
BstDSI CCRYGG 2 cut(s) 1913, 1923
BstEII GGTNACC 2 cut(s) 3645, 4462
BstFNI CGCG 1 cut(s) 2473
BstH2I RGCGCY 1 cut(s) 39
BstHHI GCGC 4 cut(s) 38, 186, 2394, 2473
BstMAI GTCTC 9 cut(s) 90, 1684, 1987, 2067, 2280, 2695, 2953, 4184, 4211
BstNI CCWGG 4 cut(s) 2007, 2738, 3635, 3703
BstNSI RCATGY 3 cut(s) 1340, 2123, 2255
BstPI GGTNACC 2 cut(s) 3645, 4462
BstSCI CCNGG 5 cut(s) 1131, 2005, 2736, 3633, 3701
BstSFI CTRYAG 2 cut(s) 89, 3176
BstSLI GKGCMC 4 cut(s) 1054, 1279, 1305, 2038
BstUI CGCG 1 cut(s) 2473
BstV2I GAAGAC 2 cut(s) 3803, 4248
BstX2I RGATCY 8 cut(s) 188, 373, 384, 433, 1234, 1594, 2092, 3607
BstXI CCANNNNNNTGG 1 cut(s) 239
BstYI RGATCY 8 cut(s) 188, 373, 384, 433, 1234, 1594, 2092, 3607
BsuI GTATCC 3 cut(s) 3017, 3412, 4105
BtgI CCRYGG 2 cut(s) 1913, 1923
BtgZI GCGATG 2 cut(s) 1188, 2865
BtrI CACGTC 1 cut(s) 330
BtsI GCAGTG 2 cut(s) 2275, 3752
BtsIMutI CAGTG 6 cut(s) 642, 852, 2275, 3035, 3752, 4092
BveI ACCTGC 1 cut(s) 1531
CaiI CAGNNNCTG 3 cut(s) 797, 917, 3953
CciI TCATGA 1 cut(s) 2404
CfoI GCGC 4 cut(s) 38, 186, 2394, 2473
Cfr10I RCCGGY 2 cut(s) 3597, 4159
Cfr13I GGNCC 6 cut(s) 914, 1474, 2616, 2683, 3905, 4345
CseI GACGC 2 cut(s) 621, 2516
Csp6I GTAC 7 cut(s) 224, 1483, 1664, 3740, 3878, 3893, 4313
CspAI ACCGGT 1 cut(s) 4159
CviQI GTAC 7 cut(s) 224, 1483, 1664, 3740, 3878, 3893, 4313
DraI TTTAAA 2 cut(s) 2808, 3279
DraIII CACNNNGTG 1 cut(s) 4108
DrdI GACNNNNNNGTC 1 cut(s) 1855
DseDI GACNNNNNNGTC 1 cut(s) 1855
Ecl136II GAGCTC 1 cut(s) 2165
Eco130I CCWWGG 7 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3828
Eco147I AGGCCT 3 cut(s) 2880, 4268, 4378
Eco24I GRGCYC 1 cut(s) 2167
Eco47I GGWCC 2 cut(s) 3905, 4345
Eco53kI GAGCTC 1 cut(s) 2165
Eco57I CTGAAG 5 cut(s) 426, 1797, 2117, 3270, 4337
Eco72I CACGTG 1 cut(s) 2606
Eco88I CYCGRG 1 cut(s) 1989
Eco91I GGTNACC 2 cut(s) 3645, 4462
EcoICRI GAGCTC 1 cut(s) 2165
EcoO109I RGGNCCY 1 cut(s) 914
EcoO65I GGTNACC 2 cut(s) 3645, 4462
EcoRI GAATTC 2 cut(s) 1687, 1903
EcoRII CCWGG 4 cut(s) 2005, 2736, 3633, 3701
EcoT14I CCWWGG 7 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3828
EcoT22I ATGCAT 2 cut(s) 1714, 2253
EcoT38I GRGCYC 1 cut(s) 2167
ErhI CCWWGG 7 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3828
FalI AAGNNNNNCTT 2 cut(s) 2878, 2910
FaqI GGGAC 4 cut(s) 309, 542, 856, 1745
FauI CCCGC 1 cut(s) 3194
FbaI TGATCA 2 cut(s) 3144, 4456
FriOI GRGCYC 1 cut(s) 2167
GlaI GCGC 4 cut(s) 37, 185, 2393, 2472
GsaI CCCAGC 2 cut(s) 196, 2662
GsuI CTGGAG 1 cut(s) 4329
HaeII RGCGCY 1 cut(s) 39
HapII CCGG 3 cut(s) 1132, 3598, 4160
HgaI GACGC 2 cut(s) 621, 2516
HhaI GCGC 4 cut(s) 38, 186, 2394, 2473
Hin1I GRCGYC 1 cut(s) 632
Hin6I GCGC 4 cut(s) 36, 184, 2392, 2471
HinP1I GCGC 4 cut(s) 36, 184, 2392, 2471
HincII GTYRAC 3 cut(s) 1815, 1848, 4221
HindII GTYRAC 3 cut(s) 1815, 1848, 4221
HindIII AAGCTT 1 cut(s) 2171
HpaII CCGG 3 cut(s) 1132, 3598, 4160
Hpy166II GTNNAC 6 cut(s) 1163, 1485, 1815, 1848, 2036, 4221
Hpy8I GTNNAC 6 cut(s) 1163, 1485, 1815, 1848, 2036, 4221
Hpy99I CGWCG 1 cut(s) 2802
HpyCH4III ACNGT 8 cut(s) 164, 588, 847, 880, 1767, 1812, 3502, 4142
HpyCH4IV ACGT 6 cut(s) 329, 471, 1517, 2605, 2797, 3738
HpySE526I ACGT 6 cut(s) 329, 471, 1517, 2605, 2797, 3738
Hsp92I GRCGYC 1 cut(s) 632
HspAI GCGC 4 cut(s) 36, 184, 2392, 2471
Ksp22I TGATCA 2 cut(s) 3144, 4456
LmnI GCTCC 7 cut(s) 709, 1915, 2581, 3166, 3549, 3568, 4123
MaeII ACGT 6 cut(s) 329, 471, 1517, 2605, 2797, 3738
MbiI CCGCTC 1 cut(s) 2494
MfeI CAATTG 2 cut(s) 153, 653
MflI RGATCY 8 cut(s) 188, 373, 384, 433, 1234, 1594, 2092, 3607
MhlI GDGCHC 5 cut(s) 1054, 1279, 1305, 2038, 2167
MlyI GAGTC 3 cut(s) 2282, 3081, 3953
MmeI TCCRAC 3 cut(s) 3115, 3462, 3546
Mph1103I ATGCAT 2 cut(s) 1714, 2253
MroXI GAANNNNTTC 4 cut(s) 411, 2433, 2628, 3810
MslI CAYNNNNRTG 3 cut(s) 2124, 3359, 4131
MspA1I CMGCKG 2 cut(s) 2545, 4181
MspCI CTTAAG 3 cut(s) 1478, 3286, 3670
MspI CCGG 3 cut(s) 1132, 3598, 4160
MspR9I CCNGG 5 cut(s) 1133, 2007, 2738, 3635, 3703
MunI CAATTG 2 cut(s) 153, 653
Mva1269I GAATGC 3 cut(s) 127, 2253, 4371
MvaI CCWGG 4 cut(s) 2007, 2738, 3635, 3703
MvnI CGCG 1 cut(s) 2473
NciI CCSGG 1 cut(s) 1133
NcoI CCATGG 2 cut(s) 1913, 1923
NheI GCTAGC 3 cut(s) 815, 1439, 4369
NlaIV GGNNCC 4 cut(s) 481, 711, 1278, 1302
NmeAIII GCCGAG 1 cut(s) 1807
NmuCI GTSAC 8 cut(s) 140, 1064, 1319, 1609, 3262, 3518, 3645, 4475
NsiI ATGCAT 2 cut(s) 1714, 2253
NspI RCATGY 3 cut(s) 1340, 2123, 2255
NspV TTCGAA 1 cut(s) 48
PaeI GCATGC 1 cut(s) 2255
PagI TCATGA 1 cut(s) 2404
PceI AGGCCT 3 cut(s) 2880, 4268, 4378
PctI GAATGC 3 cut(s) 127, 2253, 4371
PdmI GAANNNNTTC 4 cut(s) 411, 2433, 2628, 3810
PflFI GACNNNGTC 1 cut(s) 631
PflMI CCANNNNNTGG 3 cut(s) 2692, 3902, 4440
PinAI ACCGGT 1 cut(s) 4159
PleI GAGTC 3 cut(s) 2281, 3081, 3952
PmaCI CACGTG 1 cut(s) 2606
PmlI CACGTG 1 cut(s) 2606
PpsI GAGTC 3 cut(s) 2281, 3081, 3952
Ppu21I YACGTR 1 cut(s) 2606
Psp124BI GAGCTC 1 cut(s) 2167
Psp1406I AACGTT 1 cut(s) 471
Psp6I CCWGG 4 cut(s) 2005, 2736, 3633, 3701
PspCI CACGTG 1 cut(s) 2606
PspEI GGTNACC 2 cut(s) 3645, 4462
PspFI CCCAGC 2 cut(s) 192, 2658
PspGI CCWGG 4 cut(s) 2005, 2736, 3633, 3701
PspN4I GGNNCC 4 cut(s) 481, 711, 1278, 1302
PspPI GGNCC 6 cut(s) 914, 1474, 2616, 2683, 3905, 4345
PstI CTGCAG 1 cut(s) 3180
PstNI CAGNNNCTG 3 cut(s) 797, 917, 3953
PsuI RGATCY 8 cut(s) 188, 373, 384, 433, 1234, 1594, 2092, 3607
PsyI GACNNNGTC 1 cut(s) 631
PvuII CAGCTG 1 cut(s) 4181
RsaI GTAC 7 cut(s) 225, 1484, 1665, 3741, 3879, 3894, 4314
RsaNI GTAC 7 cut(s) 224, 1483, 1664, 3740, 3878, 3893, 4313
RseI CAYNNNNRTG 3 cut(s) 2124, 3359, 4131
SacI GAGCTC 1 cut(s) 2167
Sau96I GGNCC 6 cut(s) 914, 1474, 2616, 2683, 3905, 4345
ScaI AGTACT 1 cut(s) 4314
SchI GAGTC 3 cut(s) 2282, 3081, 3953
ScrFI CCNGG 5 cut(s) 1133, 2007, 2738, 3635, 3703
SduI GDGCHC 5 cut(s) 1054, 1279, 1305, 2038, 2167
SfcI CTRYAG 2 cut(s) 89, 3176
SfuI TTCGAA 1 cut(s) 48
SinI GGWCC 2 cut(s) 3905, 4345
SmiMI CAYNNNNRTG 3 cut(s) 2124, 3359, 4131
SmlI CTYRAG 8 cut(s) 1406, 1478, 2011, 2562, 2987, 3286, 3377, 3670
SmoI CTYRAG 8 cut(s) 1406, 1478, 2011, 2562, 2987, 3286, 3377, 3670
SpeI ACTAGT 1 cut(s) 2084
SphI GCATGC 1 cut(s) 2255
SseBI AGGCCT 3 cut(s) 2880, 4268, 4378
SsiI CCGC 8 cut(s) 602, 2494, 2545, 2725, 2900, 2935, 3187, 4121
SspI AATATT 1 cut(s) 10
SstI GAGCTC 1 cut(s) 2167
StuI AGGCCT 3 cut(s) 2880, 4268, 4378
StyD4I CCNGG 5 cut(s) 1131, 2005, 2736, 3633, 3701
StyI CCWWGG 7 cut(s) 232, 1054, 1727, 1913, 1923, 2881, 3828
TaaI ACNGT 8 cut(s) 164, 588, 847, 880, 1767, 1812, 3502, 4142
TaiI ACGT 6 cut(s) 332, 474, 1520, 2608, 2800, 3741
TaqI TCGA 7 cut(s) 48, 134, 2278, 2622, 2800, 2953, 3628
TatI WGTACW 4 cut(s) 223, 1482, 3877, 4312
TauI GCSGC 1 cut(s) 2727
TscAI CASTG 6 cut(s) 642, 852, 2275, 3042, 3759, 4092
TseFI GTSAC 8 cut(s) 140, 1064, 1319, 1609, 3262, 3518, 3645, 4475
Tsp45I GTSAC 8 cut(s) 140, 1064, 1319, 1609, 3262, 3518, 3645, 4475
TspRI CASTG 6 cut(s) 642, 852, 2275, 3042, 3759, 4092
Tth111I GACNNNGTC 1 cut(s) 631
Van91I CCANNNNNTGG 3 cut(s) 2692, 3902, 4440
Vha464I CTTAAG 3 cut(s) 1478, 3286, 3670
VneI GTGCAC 1 cut(s) 2034
VpaK11BI GGWCC 2 cut(s) 3905, 4345
XbaI TCTAGA 4 cut(s) 22, 376, 436, 1715
XceI RCATGY 3 cut(s) 1340, 2123, 2255
XmaJI CCTAGG 2 cut(s) 1727, 2881
XmnI GAANNNNTTC 4 cut(s) 411, 2433, 2628, 3810
ZrmI AGTACT 1 cut(s) 4314
Zsp2I ATGCAT 2 cut(s) 1714, 2253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.