Rh7DG049800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0006932
Physical Location & Seq
Forward (+)
3837521 .. 3845491
7971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG049800.1

Sequence Viewer

Length: 4782 bp
ATGGGTGTTCCCTGTGATATTGGCATTGACAAGCAATGTGCTAAATGTCCCATGTCATCTCCTTCATTTATTACAAATCCTGATGGTGAAACTAGAGATCTAGAGAAGATCCCTGCAAGAGATAACTCTGAAGTGGTTCATAAAATTAAGTGGGGGGATCTAGAGGATGATGGTTTGGCACTTCCTCTTACTAACGTTGTCGGCACCAGAATCAAGTTTGGTGCTATTGGAGATGAAAATCTGGTGGCCTCCAAAGAGCATGAGAATTGTCATAGTTTTGTCCCTTCTGCAAATTCACAAGAAAACAAACTGTTTGCTGCATCTGCGGATGCCAATAGTGTTTCTCACCAGACGGCGTCAGTGAATGATAAGGATCAATTGTATGAAGATAACTGCAAGGAGGTGGATATTATATCTGCTGAAAATGTTGAGGAGCCAATTCAGAATGACAAAATGGTTGATGTGGATAACAATACTTCAAATTGCAAGGCTATACATACCGAAAACATTGAAGCAGTCGCTGATGATCCTGTAAGTGCTAGCACTTTGGCTTGTGAAGAGGGTGGGACAGTGGGGAAAGTTGAAGCACCTGTGGTTGTAACTGTGGTAAGTAATCCTGCAATTTTTGAAGAATCAGGCCCCGATGGCAGTTCAAGTGAAGTTCATATCTCCAAAGATAAAGACTTAGTTCCACCTGACAAGAGCAACCCAGAAATTTGTGCAGAGCCTACCCTCACACCATCTGGACATTATATGTTGAACTCAAATATGAGTGCCCTTGGAGATTGTGACACAGGTGAAAGCAAAGAAAGGTTTAGGCAGCGACTTTGGTGCTTTCTCTTTGAGAATCTTAACCGGGCTGTGGATGAGCTTTATCTTCTTTGTGAACTAGAGTGCGATGTAGAGCAGATGAAAGAGGCCATTCTTGTTCTTGAAGAGGCTCGCTCTGATTTCAGAGATCTGAATACTAGAGTGGAAGATTTTGAGAAAATAAAAAGGGCACCATCTCAGTTGATAGATGGGGTGCCCATCACCTTGAAGAGTGACCATCGTAGGCCACATGCTCTTTCATGGGAGGTTAGAAGAATGACAACTTCTGCACACAAAGCAGAGATACTATCCTCATCTCTTGAGGCTTTTAAGAAAATTCAGAAAGAAAGAGCTAGCTTTTGTGCAGCCAATGATGCTAAACTTATGGGCCTTAAGTACACAAATATCCAATCTAGTGATAACCTCAATACGTTACCTGCAAGAAATGATGGGAAATTAAATTCTAAAGAATCAACAATGAAGTTAAGAAGATATAGTGGAGGTTCAGATCTCATTGAAGCCGTCACTAATGGGAATAAGAATACTGAATCAAGCAGTTTGAGCAGAGTAAAGTTGGTACAAAATGGGCGTGTCTCTCAGAATTCATCTTCCTTTGTTGTTAATGCATCTAGATTGCCTCCTAGGGACAATTCTGCTGCTGGAAAAACTAAGAGAGAACAGTCTGGGTCTGAAGCCGAGAAGATGCTTGCTAGGAAAGAAAAACTGTCAACAGAAGGTGGTGTTGAAAAAATTGCCAAGTTGACCAATCAGTCCAAAAAGCAAATTCCACTTTTGGAAAAAGATAAAGAAAAGAGGAATTCAGCTCCATGGAAATCCATGGATGCTTGGAAGGAGAAGAGGAATTGGGAGGATGTTCTTTCATCTCCTTCTCGTGTCTCTTCCCGAGTTTCACATTCGCCTGGCTTGAGGAGGAAAAGTGCTGATCGTGCACGAATGTTGCATGATAAACTAATGTCTCCTGAGAAGAAGAAAAAAACTAGTTTGGATCTGAAGAGAGAGGCAGAAGAAAAACATGCCCGTGCTATGAGAATCAGAAGCGAGCTAGAGAATGAGAGAGCTCAGAAGCTTCATCGTAGTTCAGAAAAGATGAATAGAGTTAATGAATTACAGGCTGTAAAAAATATGAAGTTACGGGAGGGAATGCATGCTCGTCATCAACGCAGTGAGTCTCGACACGAAGCACATCTAGCTCAACGAGTGAAGAGAGCTGGTGATGAAAGCATCAAAGTTAAAGAGGTTCAGTTCATAACTTCCTTAAATGAAGAAAATAAAAAGCTCAGTTTGCGCCAGAAGCATCATGATTCAGAACTGAGGAGAGCTGAAAAACTTCAAGTGATAAGAACTAAACAAAAAGAGGATATGGCGCGAGAAGAAGCTGTTTTAGAGCGGAGGAAACTCATTGAAGCTGAAAAGTTGCAGCGTCTTGCTGAAACACAGCGGAGAAAGGAAGAGGCTCAAGTTAGAAGGGAGGAGGAGCGTAAAGCATCAAGTGCAGCACGTGAAGCAAGGGCCATCGAACAACTTCGGAGGAAGGAGGAAAGAGCCAAAGCCCAGCAGGAGGAGGCTGAACTGCTGGCCCAGAAATTGGCTGAGAGACTAAGAGAAAGTGAGCAACGCCGCAAATTTTACCTGGAACAGATACGAGAGAGAGCTTCTATGGATTTCAGGGATCAATCTTCACCTTTATTACGTCGAACTTTAAACAAGGATGTTCAGGGAAGATCATCATCAATTAACAATGGCGATGATTATCAAGTAAGCAGTTTCTCAGGCCTAGGAAGTTGCACTTTTGCGGAAAGCAATAATACAGCACAACATTCAATGAAGCGGAGAATTAAAAAAATTCGACAGAGACTTATGGCTCTAAAATATGAAATTCTTGAGCCTCCTGTTGGTGCTGAAAATGCTGGCATTGGATACAGAACAGCACTGGGAACTGCAAGGGCAAAGATTGGGAGATGGCTTCAAGAACTTCAAAGACTCCGACAAGCAAGAAAAGAAGGGGCTGCAAGCATTGGGTTAATAACTGCTGAAATGATCAAGTATTTGGAGGGAAAGGAGCTGGAACTGCAGGCTTCCCGCCAAGCTGGTCTGATTGATTTTATCGCTTCTGCCCTGCCTGCTTCTTATACATCAAAACCTGAAGCCTGCCAGGTGACAATACATCTTTTAAAACTCTTAAGGGTGGTGTTATCTCTGCCTACAAACAGGAGTTATTTTCTTGCACAGAATCTCTTGCCCCCTATCATCCCAATGCTGTCTGCTGCCCTTGAGAGCTACATAAAGATAGCAGTATCCTTGAATCCTTCTGGTAATGTTAATTTCCCATCTACCAAAACCTCAGTTGAAAATTTTGAATCAATATCTGAGGTGTTGGATGGTTATTTATGGACTGTAACAACAATAGTCAGTCACATAAGTTCTGATGAACGACAGCTCCAAATGAGGGATAGTTTGTTGGAGCTACTGATTGCCTACCAAGTTATTCACCGGCTGCGAGATCTCTTTGCCCTTTATGATCGACCCCAGGTGGAGGGGTCACCATTTCCATCGTCAATTATCTTAAGTATAAATTTGTTGGTTGTCTTAACTTCCAGGTCTGAAACTGATTGTCCTATTGATTGGAAAGAAGTACCTATTGAAACACTGCTTGGAAATGGAAGTGAAGAGGCTAAGATTGCTGAGTGTGATAATTCGGAATGTCTTCCTTCAACTCAGACCTTGGAAGATTTTAGGCCTCCATCATCATTGGTGAATGGTGGTAAATTTGTACATCTCCCAGATGTACCAGAGGATGGACCAGTAGATGAGATGTGTAAGATAAATGAATCTGTGGAGTCAGTAGCTGCTGCTAAGAATAGTGAGAAAGAGCAGTCTAATAGTCTGGTTGAAGCAAACAATGCTAACACCTTCAAAACAGGTGTTCCAGATGAACCCCAGAAGATGCTGAATGAGGATATTATGAAGCCTTTTGCATCAGTGGAGGAAGAGAAACACTTGGTGGATACTGGTGCGGAACATAAGTATGATAACAGTATGAGCTTGCAGCAACCGGTAGCATTTCTTCTTTCAGCTGTATCAGAGACAGGGCTTGTCAGTCTCCCATCTCTGTTGACATCTGTGTTATTACAGGCAAACAATAGATTGTCTTCTGAACAGGCCTCAGATTCCCTCCCATCTAATTTTGAAGATGTAGCAACTGGAGTACTGAAGGTGTTGAACAATTTGGCTCTTTTGGACCTTAAATTCATGCAGAGAATGCTAGCTAGGCCTGACCTAAAAATGGAATTTTTCCATTTGATGAGTTTCCTGCTTTCTCATTGTGCCAGCAAGTGGAAAGTAGCTAATGATCAGGTGGGGCTGCTTTTGCTTGAATCTCTTTTGCTTCTTGGTCATTTTGCCCTGTTCCACCTTGGGAATCAAGCTGTCCTTCGTTGGGGAAAGAGTCCTACCATTATCCACAAGGTATGCGATTTGCCATTTGTATTCTTCAGTGATCCTGAGTTGATGCCAGTCTTGGCTGGCACGCTGGTTGCTGCCTGTTATGGGTGTGAGCAGAACAAGGGTGTGGTTCAGCAGGAAATGAGTACAGATATGCTACTCTCCCTGTTACAATCTTGCAGAAACGTCCTGCCAGCAGTTAGATCCAATTCTAAGTTGGACAGTGGCCCAGCAGATGATGTGCCCCTAAGATCCGGCCGTAACAGTACCAAGAACTCTAGGGTTTCTTCCGGAAAGGGTGTTGCTTCAGGAAACAGCATGAGAATTGGCAAGATGAGAAGCCATAGGGAAAGTAAAACAATTAGGAGTTATGAAGAGTTGGCTCCGAAGCAGATTCTTCCATCTACAGACACTGCCTCTATGATGCTGCATTGTAGATTTCCGAACAGCTTCATCGATAGAGCAGAAAATTTCTTTTCAACTGAGAACCCCAGCATCGCTGGAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SCAPER_N

Protein Analysis

1593

Amino Acids

177.99

Weight (kDa)

6.86

Isoelectric Point (pI)

55.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAPER_N PF16501 267 - 367 1.2e-15 S phase cyclin A-associated protein in the endoplasmic reticulum
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1579
Acc36I ACCTGC 1 cut(s) 1255
AccB1I GGYRCC 3 cut(s) 203, 1000, 1024
AccB7I CCANNNNNTGG 3 cut(s) 2416, 3626, 4164
AccBSI CCGCTC 1 cut(s) 2218
AccII CGCG 1 cut(s) 2197
AccIII TCCGGA 1 cut(s) 4562
AciI CCGC 8 cut(s) 326, 2218, 2269, 2449, 2624, 2659, 2911, 3845
AclI AACGTT 1 cut(s) 195
AclWI GGATC 9 cut(s) 103, 165, 381, 521, 1824, 2508, 4322, 4470, 4518
AcoI YGGCCR 1 cut(s) 4528
AcuI CTGAAG 7 cut(s) 150, 1521, 1841, 2994, 4061, 4306, 4563
AcvI CACGTG 1 cut(s) 2330
AcyI GRCGYC 1 cut(s) 356
AdeI CACNNNGTG 1 cut(s) 3832
AfaI GTAC 8 cut(s) 1208, 1389, 3465, 3603, 3618, 4038, 4420, 4540
AflII CTTAAG 3 cut(s) 1202, 3010, 3394
AgeI ACCGGT 1 cut(s) 3883
AhlI ACTAGT 1 cut(s) 1808
AjnI CCWGG 5 cut(s) 1729, 2460, 2982, 3357, 3425
AjuI GAANNNNNNNTTGG 2 cut(s) 3465, 3497
AloI GAACNNNNNNTCC 2 cut(s) 3252, 3284
Alw21I GWGCWC 2 cut(s) 1762, 1891
Alw26I GTCTC 8 cut(s) 1408, 1711, 1791, 2004, 2419, 2677, 3908, 3935
Alw44I GTGCAC 1 cut(s) 1758
AlwI GGATC 9 cut(s) 103, 165, 381, 521, 1824, 2508, 4322, 4470, 4518
AlwNI CAGNNNCTG 3 cut(s) 521, 3677, 4685
Ama87I CYCGRG 1 cut(s) 1713
Aor13HI TCCGGA 1 cut(s) 4562
ApaLI GTGCAC 1 cut(s) 1758
AsiGI ACCGGT 1 cut(s) 3883
Asp700I GAANNNNTTC 5 cut(s) 135, 2157, 2352, 3534, 4721
AspA2I CCTAGG 2 cut(s) 1451, 2605
AspLEI GCGC 2 cut(s) 2118, 2197
AspS9I GGNCC 7 cut(s) 638, 1198, 2340, 2407, 3629, 4069, 4499
AsuC2I CCSGG 1 cut(s) 857
AsuNHI GCTAGC 3 cut(s) 539, 1163, 4093
AvaI CYCGRG 1 cut(s) 1713
AvaII GGWCC 2 cut(s) 3629, 4069
AvrII CCTAGG 2 cut(s) 1451, 2605
BaeGI GKGCMC 5 cut(s) 778, 1003, 1029, 1762, 4518
BanI GGYRCC 3 cut(s) 203, 1000, 1024
BanII GRGCYC 1 cut(s) 1891
BarI GAAGNNNNNNTAC 2 cut(s) 3879, 3911
BauI CACGAG 1 cut(s) 1701
BbrPI CACGTG 1 cut(s) 2330
BbsI GAAGAC 2 cut(s) 3527, 3972
Bbv12I GWGCWC 2 cut(s) 1762, 1891
BceAI ACGGC 3 cut(s) 369, 1316, 4515
BcgI CGANNNNNNTGC 2 cut(s) 813, 847
BciT130I CCWGG 5 cut(s) 1731, 2462, 2984, 3359, 3427
BciVI GTATCC 3 cut(s) 2741, 3136, 3829
BclI TGATCA 2 cut(s) 2868, 4180
BcnI CCSGG 1 cut(s) 857
BcoDI GTCTC 8 cut(s) 1408, 1711, 1791, 2004, 2419, 2677, 3908, 3935
BcuI ACTAGT 1 cut(s) 1808
BfmI CTRYAG 2 cut(s) 2900, 4677
BfrI CTTAAG 3 cut(s) 1202, 3010, 3394
BfuAI ACCTGC 1 cut(s) 1255
BfuI GTATCC 3 cut(s) 2741, 3136, 3829
BglI GCCNNNNNGGC 1 cut(s) 645
BglII AGATCT 4 cut(s) 97, 958, 1318, 3331
BlnI CCTAGG 2 cut(s) 1451, 2605
BmcAI AGTACT 1 cut(s) 4038
Bme1390I CCNGG 6 cut(s) 857, 1731, 2462, 2984, 3359, 3427
Bme18I GGWCC 2 cut(s) 3629, 4069
BmeT110I CYCGRG 1 cut(s) 1713
BmgT120I GGNCC 7 cut(s) 638, 1198, 2340, 2407, 3629, 4069, 4499
BmiI GGNNCC 6 cut(s) 205, 435, 640, 1002, 1026, 4656
BmrFI CCNGG 6 cut(s) 857, 1731, 2462, 2984, 3359, 3427
BmrI ACTGGG 1 cut(s) 2771
BmtI GCTAGC 3 cut(s) 543, 1167, 4097
BmuI ACTGGG 1 cut(s) 2771
BpiI GAAGAC 2 cut(s) 3527, 3972
BplI GAGNNNNNCTC 2 cut(s) 929, 961
BpmI CTGGAG 1 cut(s) 4053
BpuEI CTTGAG 5 cut(s) 1151, 1756, 2271, 2732, 3122
BpuMI CCSGG 1 cut(s) 857
Bsa29I ATCGAT 1 cut(s) 4728
BsaAI YACGTR 1 cut(s) 2330
BsaBI GATNNNNATC 4 cut(s) 237, 372, 2557, 2580
BsaHI GRCGYC 1 cut(s) 356
BsaJI CCNNGG 8 cut(s) 778, 1451, 1637, 1647, 2605, 3357, 3552, 4243
BsaWI WCCGGW 2 cut(s) 3883, 4562
BsaXI ACNNNNNCTCC 4 cut(s) 1732, 1762, 3252, 3282
Bse118I RCCGGY 2 cut(s) 3321, 3883
Bse1I ACTGG 5 cut(s) 2766, 3632, 3844, 4036, 4343
Bse3DI GCAATG 1 cut(s) 41
Bse8I GATNNNNATC 4 cut(s) 237, 372, 2557, 2580
BseAI TCCGGA 1 cut(s) 4562
BseBI CCWGG 5 cut(s) 1731, 2462, 2984, 3359, 3427
BseCI ATCGAT 1 cut(s) 4728
BseDI CCNNGG 8 cut(s) 778, 1451, 1637, 1647, 2605, 3357, 3552, 4243
BseGI GGATG 9 cut(s) 172, 334, 871, 1657, 1687, 2545, 3078, 3214, 3631
BseJI GATNNNNATC 4 cut(s) 237, 372, 2557, 2580
BseMI GCAATG 1 cut(s) 41
BseNI ACTGG 5 cut(s) 2766, 3632, 3844, 4036, 4343
BseRI GAGGAG 6 cut(s) 446, 1753, 2158, 2315, 2318, 2405
BseSI GKGCMC 5 cut(s) 778, 1003, 1029, 1762, 4518
BseX3I CGGCCG 1 cut(s) 4528
BseYI CCCAGC 3 cut(s) 2382, 4501, 4763
BsgI GTGCAG 4 cut(s) 741, 1083, 1194, 2343
Bsh1236I CGCG 1 cut(s) 2197
Bsh1285I CGRYCG 1 cut(s) 4531
BshNI GGYRCC 3 cut(s) 203, 1000, 1024
BshTI ACCGGT 1 cut(s) 3883
BshVI ATCGAT 1 cut(s) 4728
BsiEI CGRYCG 1 cut(s) 4531
BsiHKAI GWGCWC 2 cut(s) 1762, 1891
BsiHKCI CYCGRG 1 cut(s) 1713
BsiSI CCGG 5 cut(s) 856, 3322, 3884, 4527, 4563
BslFI GGGAC 4 cut(s) 33, 266, 580, 1469
BsmAI GTCTC 8 cut(s) 1408, 1711, 1791, 2004, 2419, 2677, 3908, 3935
BsmFI GGGAC 4 cut(s) 33, 266, 580, 1469
BsmI GAATGC 2 cut(s) 1977, 4095
BsoBI CYCGRG 1 cut(s) 1713
Bsp1286I GDGCHC 6 cut(s) 778, 1003, 1029, 1762, 1891, 4518
Bsp13I TCCGGA 1 cut(s) 4562
Bsp1407I TGTACA 1 cut(s) 3601
Bsp19I CCATGG 2 cut(s) 1637, 1647
BspACI CCGC 8 cut(s) 326, 2218, 2269, 2449, 2624, 2659, 2911, 3845
BspDI ATCGAT 1 cut(s) 4728
BspEI TCCGGA 1 cut(s) 4562
BspFNI CGCG 1 cut(s) 2197
BspHI TCATGA 1 cut(s) 2128
BspLI GGNNCC 6 cut(s) 205, 435, 640, 1002, 1026, 4656
BspMAI CTGCAG 1 cut(s) 2904
BspMI ACCTGC 1 cut(s) 1255
BspOI GCTAGC 3 cut(s) 543, 1167, 4097
BspPI GGATC 9 cut(s) 103, 165, 381, 521, 1824, 2508, 4322, 4470, 4518
BspT107I GGYRCC 3 cut(s) 203, 1000, 1024
BspTI CTTAAG 3 cut(s) 1202, 3010, 3394
BsrBI CCGCTC 1 cut(s) 2218
BsrDI GCAATG 1 cut(s) 41
BsrFI RCCGGY 2 cut(s) 3321, 3883
BsrGI TGTACA 1 cut(s) 3601
BsrI ACTGG 5 cut(s) 2766, 3632, 3844, 4036, 4343
BssAI RCCGGY 2 cut(s) 3321, 3883
BssECI CCNNGG 8 cut(s) 778, 1451, 1637, 1647, 2605, 3357, 3552, 4243
BssNI GRCGYC 1 cut(s) 356
BssSI CACGAG 1 cut(s) 1701
BssT1I CCWWGG 7 cut(s) 778, 1451, 1637, 1647, 2605, 3552, 4243
Bst2BI CACGAG 1 cut(s) 1701
Bst2UI CCWGG 5 cut(s) 1731, 2462, 2984, 3359, 3427
Bst4CI ACNGT 9 cut(s) 312, 571, 604, 1491, 1536, 3226, 3866, 4496, 4538
BstACI GRCGYC 1 cut(s) 356
BstAFI CTTAAG 3 cut(s) 1202, 3010, 3394
BstAPI GCANNNNNTGC 3 cut(s) 2321, 3731, 4090
BstAUI TGTACA 1 cut(s) 3601
BstBAI YACGTR 1 cut(s) 2330
BstDSI CCRYGG 2 cut(s) 1637, 1647
BstEII GGTNACC 1 cut(s) 3369
BstF5I GGATG 9 cut(s) 172, 334, 871, 1657, 1687, 2545, 3078, 3214, 3631
BstFNI CGCG 1 cut(s) 2197
BstHHI GCGC 2 cut(s) 2118, 2197
BstMAI GTCTC 8 cut(s) 1408, 1711, 1791, 2004, 2419, 2677, 3908, 3935
BstMCI CGRYCG 1 cut(s) 4531
BstNI CCWGG 5 cut(s) 1731, 2462, 2984, 3359, 3427
BstNSI RCATGY 3 cut(s) 1064, 1847, 1979
BstPI GGTNACC 1 cut(s) 3369
BstSCI CCNGG 6 cut(s) 855, 1729, 2460, 2982, 3357, 3425
BstSFI CTRYAG 2 cut(s) 2900, 4677
BstSLI GKGCMC 5 cut(s) 778, 1003, 1029, 1762, 4518
BstUI CGCG 1 cut(s) 2197
BstV2I GAAGAC 2 cut(s) 3527, 3972
BstX2I RGATCY 9 cut(s) 97, 108, 157, 958, 1318, 1816, 3331, 4475, 4523
BstYI RGATCY 9 cut(s) 97, 108, 157, 958, 1318, 1816, 3331, 4475, 4523
BstZI CGGCCG 1 cut(s) 4528
Bsu15I ATCGAT 1 cut(s) 4728
BsuI GTATCC 3 cut(s) 2741, 3136, 3829
BsuTUI ATCGAT 1 cut(s) 4728
BtgI CCRYGG 2 cut(s) 1637, 1647
BtgZI GCGATG 3 cut(s) 912, 2589, 4753
BtsCI GGATG 9 cut(s) 172, 334, 871, 1657, 1687, 2545, 3078, 3214, 3631
BtsI GCAGTG 3 cut(s) 1999, 3476, 4683
BtsIMutI CAGTG 9 cut(s) 366, 576, 1999, 2759, 3476, 3816, 4330, 4501, 4683
BveI ACCTGC 1 cut(s) 1255
CaiI CAGNNNCTG 3 cut(s) 521, 3677, 4685
CciI TCATGA 1 cut(s) 2128
CfoI GCGC 2 cut(s) 2118, 2197
Cfr10I RCCGGY 2 cut(s) 3321, 3883
Cfr13I GGNCC 7 cut(s) 638, 1198, 2340, 2407, 3629, 4069, 4499
ClaI ATCGAT 1 cut(s) 4728
CseI GACGC 2 cut(s) 345, 2240
Csp6I GTAC 8 cut(s) 1207, 1388, 3464, 3602, 3617, 4037, 4419, 4539
CspAI ACCGGT 1 cut(s) 3883
CviQI GTAC 8 cut(s) 1207, 1388, 3464, 3602, 3617, 4037, 4419, 4539
DraI TTTAAA 2 cut(s) 2532, 3003
DraIII CACNNNGTG 1 cut(s) 3832
DrdI GACNNNNNNGTC 1 cut(s) 1579
DseDI GACNNNNNNGTC 1 cut(s) 1579
EaeI YGGCCR 1 cut(s) 4528
EagI CGGCCG 1 cut(s) 4528
Ecl136II GAGCTC 1 cut(s) 1889
EclXI CGGCCG 1 cut(s) 4528
Eco130I CCWWGG 7 cut(s) 778, 1451, 1637, 1647, 2605, 3552, 4243
Eco147I AGGCCT 4 cut(s) 2604, 3568, 3992, 4102
Eco24I GRGCYC 1 cut(s) 1891
Eco47I GGWCC 2 cut(s) 3629, 4069
Eco52I CGGCCG 1 cut(s) 4528
Eco53kI GAGCTC 1 cut(s) 1889
Eco57I CTGAAG 7 cut(s) 150, 1521, 1841, 2994, 4061, 4306, 4563
Eco72I CACGTG 1 cut(s) 2330
Eco88I CYCGRG 1 cut(s) 1713
Eco91I GGTNACC 1 cut(s) 3369
EcoICRI GAGCTC 1 cut(s) 1889
EcoO109I RGGNCCY 1 cut(s) 638
EcoO65I GGTNACC 1 cut(s) 3369
EcoRI GAATTC 2 cut(s) 1411, 1627
EcoRII CCWGG 5 cut(s) 1729, 2460, 2982, 3357, 3425
EcoT14I CCWWGG 7 cut(s) 778, 1451, 1637, 1647, 2605, 3552, 4243
EcoT22I ATGCAT 2 cut(s) 1438, 1977
EcoT38I GRGCYC 1 cut(s) 1891
ErhI CCWWGG 7 cut(s) 778, 1451, 1637, 1647, 2605, 3552, 4243
FalI AAGNNNNNCTT 4 cut(s) 2602, 2634, 4245, 4277
FaqI GGGAC 4 cut(s) 33, 266, 580, 1469
FauI CCCGC 1 cut(s) 2918
FbaI TGATCA 2 cut(s) 2868, 4180
FokI GGATG 9 cut(s) 179, 341, 878, 1664, 1694, 2552, 3065, 3221, 3638
FriOI GRGCYC 1 cut(s) 1891
GlaI GCGC 2 cut(s) 2117, 2196
GsaI CCCAGC 3 cut(s) 2386, 4505, 4767
GsuI CTGGAG 1 cut(s) 4053
HapII CCGG 5 cut(s) 856, 3322, 3884, 4527, 4563
HgaI GACGC 2 cut(s) 345, 2240
HhaI GCGC 2 cut(s) 2118, 2197
Hin1I GRCGYC 1 cut(s) 356
Hin6I GCGC 2 cut(s) 2116, 2195
HinP1I GCGC 2 cut(s) 2116, 2195
HincII GTYRAC 3 cut(s) 1539, 1572, 3945
HindII GTYRAC 3 cut(s) 1539, 1572, 3945
HindIII AAGCTT 1 cut(s) 1895
HpaII CCGG 5 cut(s) 856, 3322, 3884, 4527, 4563
Hpy166II GTNNAC 6 cut(s) 887, 1209, 1539, 1572, 1760, 3945
Hpy8I GTNNAC 6 cut(s) 887, 1209, 1539, 1572, 1760, 3945
Hpy99I CGWCG 1 cut(s) 2526
HpyCH4III ACNGT 9 cut(s) 312, 571, 604, 1491, 1536, 3226, 3866, 4496, 4538
HpyCH4IV ACGT 5 cut(s) 195, 1241, 2329, 2521, 4458
HpySE526I ACGT 5 cut(s) 195, 1241, 2329, 2521, 4458
Hsp92I GRCGYC 1 cut(s) 356
HspAI GCGC 2 cut(s) 2116, 2195
Kpn2I TCCGGA 1 cut(s) 4562
Ksp22I TGATCA 2 cut(s) 2868, 4180
LmnI GCTCC 7 cut(s) 433, 1639, 2305, 2890, 3273, 3292, 4660
MaeII ACGT 5 cut(s) 195, 1241, 2329, 2521, 4458
MbiI CCGCTC 1 cut(s) 2218
MfeI CAATTG 1 cut(s) 377
MflI RGATCY 9 cut(s) 97, 108, 157, 958, 1318, 1816, 3331, 4475, 4523
MhlI GDGCHC 6 cut(s) 778, 1003, 1029, 1762, 1891, 4518
MlyI GAGTC 4 cut(s) 2006, 2805, 3677, 4285
MmeI TCCRAC 4 cut(s) 2839, 3186, 3270, 4470
Mph1103I ATGCAT 2 cut(s) 1438, 1977
MroI TCCGGA 1 cut(s) 4562
MroXI GAANNNNTTC 5 cut(s) 135, 2157, 2352, 3534, 4721
MslI CAYNNNNRTG 3 cut(s) 1848, 3083, 3855
MspA1I CMGCKG 2 cut(s) 2269, 3905
MspCI CTTAAG 3 cut(s) 1202, 3010, 3394
MspI CCGG 5 cut(s) 856, 3322, 3884, 4527, 4563
MspR9I CCNGG 6 cut(s) 857, 1731, 2462, 2984, 3359, 3427
MunI CAATTG 1 cut(s) 377
Mva1269I GAATGC 2 cut(s) 1977, 4095
MvaI CCWGG 5 cut(s) 1731, 2462, 2984, 3359, 3427
MvnI CGCG 1 cut(s) 2197
NciI CCSGG 1 cut(s) 857
NcoI CCATGG 2 cut(s) 1637, 1647
NheI GCTAGC 3 cut(s) 539, 1163, 4093
NlaIV GGNNCC 6 cut(s) 205, 435, 640, 1002, 1026, 4656
NmeAIII GCCGAG 1 cut(s) 1531
NmuCI GTSAC 6 cut(s) 788, 1043, 1333, 2986, 3242, 3369
NsiI ATGCAT 2 cut(s) 1438, 1977
NspI RCATGY 3 cut(s) 1064, 1847, 1979
PaeI GCATGC 1 cut(s) 1979
PagI TCATGA 1 cut(s) 2128
PceI AGGCCT 4 cut(s) 2604, 3568, 3992, 4102
PctI GAATGC 2 cut(s) 1977, 4095
PdmI GAANNNNTTC 5 cut(s) 135, 2157, 2352, 3534, 4721
PflFI GACNNNGTC 1 cut(s) 355
PflMI CCANNNNNTGG 3 cut(s) 2416, 3626, 4164
PinAI ACCGGT 1 cut(s) 3883
PleI GAGTC 4 cut(s) 2005, 2805, 3676, 4284
PmaCI CACGTG 1 cut(s) 2330
PmlI CACGTG 1 cut(s) 2330
PpsI GAGTC 4 cut(s) 2005, 2805, 3676, 4284
Ppu21I YACGTR 1 cut(s) 2330
Psp124BI GAGCTC 1 cut(s) 1891
Psp1406I AACGTT 1 cut(s) 195
Psp6I CCWGG 5 cut(s) 1729, 2460, 2982, 3357, 3425
PspCI CACGTG 1 cut(s) 2330
PspEI GGTNACC 1 cut(s) 3369
PspFI CCCAGC 3 cut(s) 2382, 4501, 4763
PspGI CCWGG 5 cut(s) 1729, 2460, 2982, 3357, 3425
PspN4I GGNNCC 6 cut(s) 205, 435, 640, 1002, 1026, 4656
PspPI GGNCC 7 cut(s) 638, 1198, 2340, 2407, 3629, 4069, 4499
PstI CTGCAG 1 cut(s) 2904
PstNI CAGNNNCTG 3 cut(s) 521, 3677, 4685
PsuI RGATCY 9 cut(s) 97, 108, 157, 958, 1318, 1816, 3331, 4475, 4523
PsyI GACNNNGTC 1 cut(s) 355
PvuII CAGCTG 1 cut(s) 3905
RsaI GTAC 8 cut(s) 1208, 1389, 3465, 3603, 3618, 4038, 4420, 4540
RsaNI GTAC 8 cut(s) 1207, 1388, 3464, 3602, 3617, 4037, 4419, 4539
RseI CAYNNNNRTG 3 cut(s) 1848, 3083, 3855
SacI GAGCTC 1 cut(s) 1891
Sau96I GGNCC 7 cut(s) 638, 1198, 2340, 2407, 3629, 4069, 4499
ScaI AGTACT 1 cut(s) 4038
SchI GAGTC 4 cut(s) 2006, 2805, 3677, 4285
ScrFI CCNGG 6 cut(s) 857, 1731, 2462, 2984, 3359, 3427
SduI GDGCHC 6 cut(s) 778, 1003, 1029, 1762, 1891, 4518
SfcI CTRYAG 2 cut(s) 2900, 4677
SinI GGWCC 2 cut(s) 3629, 4069
SmiMI CAYNNNNRTG 3 cut(s) 1848, 3083, 3855
SmlI CTYRAG 8 cut(s) 1130, 1202, 1735, 2286, 2711, 3010, 3101, 3394
SmoI CTYRAG 8 cut(s) 1130, 1202, 1735, 2286, 2711, 3010, 3101, 3394
SpeI ACTAGT 1 cut(s) 1808
SphI GCATGC 1 cut(s) 1979
SseBI AGGCCT 4 cut(s) 2604, 3568, 3992, 4102
SsiI CCGC 8 cut(s) 326, 2218, 2269, 2449, 2624, 2659, 2911, 3845
SstI GAGCTC 1 cut(s) 1891
StuI AGGCCT 4 cut(s) 2604, 3568, 3992, 4102
StyD4I CCNGG 6 cut(s) 855, 1729, 2460, 2982, 3357, 3425
StyI CCWWGG 7 cut(s) 778, 1451, 1637, 1647, 2605, 3552, 4243
TaaI ACNGT 9 cut(s) 312, 571, 604, 1491, 1536, 3226, 3866, 4496, 4538
TaiI ACGT 5 cut(s) 198, 1244, 2332, 2524, 4461
TaqI TCGA 6 cut(s) 2002, 2346, 2524, 2677, 3352, 4728
TatI WGTACW 4 cut(s) 1206, 3601, 4036, 4418
TauI GCSGC 1 cut(s) 2451
TscAI CASTG 9 cut(s) 366, 576, 1999, 2766, 3483, 3816, 4330, 4501, 4690
TseFI GTSAC 6 cut(s) 788, 1043, 1333, 2986, 3242, 3369
Tsp45I GTSAC 6 cut(s) 788, 1043, 1333, 2986, 3242, 3369
TspRI CASTG 9 cut(s) 366, 576, 1999, 2766, 3483, 3816, 4330, 4501, 4690
Tth111I GACNNNGTC 1 cut(s) 355
Van91I CCANNNNNTGG 3 cut(s) 2416, 3626, 4164
Vha464I CTTAAG 3 cut(s) 1202, 3010, 3394
VneI GTGCAC 1 cut(s) 1758
VpaK11BI GGWCC 2 cut(s) 3629, 4069
XbaI TCTAGA 3 cut(s) 100, 160, 1439
XceI RCATGY 3 cut(s) 1064, 1847, 1979
XcmI CCANNNNNNNNNTGG 1 cut(s) 4486
XmaJI CCTAGG 2 cut(s) 1451, 2605
XmnI GAANNNNTTC 5 cut(s) 135, 2157, 2352, 3534, 4721
ZrmI AGTACT 1 cut(s) 4038
Zsp2I ATGCAT 2 cut(s) 1438, 1977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.